lowQualScore : 111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1111 1111111111111111 1 1 1 333333333333333333333333333333333333333333333333333333333333
lowQualScore : 1 888888888888 1 6666 66 333 444444 1 1 444444 1 1 555 1 11 1 2 1 22 444444 6 444444 777777 6666 0000000000000000 0 33 2 1 3 77 2 6 333333 333333 11 1 11 555 11 2 1 3 1 1 222222222222222222222222222222222222222222222222222222222222 77777777777777 1
lowQualScore : . ............ . .... .. ... ...... . . ...... . . ... . .. . . . .. ...... . ...... ...... .... ................ . .. . . . .. . . ...... ...... .. . .. ... .. . . . . . ............................................................ .............. .
lowQualScore : 9 555555555555 2 5555 55 000 111111 4 4 111111 3 4 000 8 99 4 9 4 00 333333 0 444444 777777 3333 2222222222222222 2 00 4 2 6 77 2 8 555555 555555 77 2 77 222 77 5 2 8 2 2 000000000000000000000000000000000000000000000000000000000000 88888888888888 3
consensus : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
Reference ( gi|45945 ) : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATTTGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTCA--T-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--TGGG--AGAAGTGAGAG-AA-TTTC-GG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45946 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCAAG-ATTTGT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTCA--T-T-TT-A--TGTAGGGTAAGCTCCCAATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CAGG--AGAAGTGAGAG-AA-ATTC-GG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45947 : CAGTGC-TCCAAGAAAAAAA------------AA-TTT----GG--GACT---AGCC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTG-------ATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------ACATAAACATA----GAC----------------TTAAATGTATTCA--T-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--TGGG--AGAAGTGAGAG-AA-TTTT-GG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45954 : CAGTGC-TCCAAGAAAAAAA------------AATTTT----GT--GACT---AGCC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCTA-------------------------CTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTCA--T-T-TT-A--TGTAGGGTAAGCTTCCCATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTTC-GG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTAATT
gi|45949 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCCG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CGTA----GAC----------------TTAAATGTATTCA--T-T-TT-A--TGTAGGGTTAACTCCCCTTAATTTTATG------CA------TTACT--AAA-TCAC--CAGTTTTAGAGTTTGAATAAGAC--TGGG---GAAGGGAGAG-AA-TTTC-GG-GAT-AACTGACTACGTCTCTGTCAG--------------TA--------------T--------------GTCCAACTTATTATAT--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45948 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGC--------A-GGGC-AAGTAGGTT------GAAAA-AAATCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CGTA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTTATG------CA------TGTCT--AAA-TCAC--CAGTTTTAAAGTTTGAATAAGAC--TGGG--AGCAGGGAGAG-AA-TTTC-AG-AAG-AACTGACTACGTCTCTGTCAG--------------TA--------------T--------------GTCCAACTTATTATGT--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45955 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAGGTT------GAAAA-AA-ACTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTTAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCAC--AAGTTTTAGAGTTT-----------TTAG--AGAAGTGAGAG-AA-TTTA-GG-GAG-AACTGACTATGTCTCTGTCAGTATGTCCAACTTATTA--------------T--------------G--------------T--------------TGTTTTTAATCTTTG-TTCTTTATT
gi|45951 : CAGTGC-TCCAAGAAAAAAA------------AA--TG----GG--GACT---AGCC------CA-GAGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGACCAG-ATTTGT-ATTACC--AAAAC------ACCTTGCGGTATAATATGAGATATGTAA------A------CATA----GAC----------------TGAAATGTAATAA--TGT-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAG-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTTCAGG-GAG-AACTGACTACGTCTCTATCAGTATGCCCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAATCCTTG-TTCTTTATT
gi|45953 : CAGTGC-TCCAAGAAAAAAA------------AA-TTT----GG--GACT---AGCC------CA-GGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGGCTT---AAAA-ATAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACT--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CGTA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTGATG------CA------TGTCT--AAA-TCAC--CAGTTTTAGAGTTTGAATAAGAC--TGGG--AGAAGGGAGAG-AA-TTTC-AG-AAG-AACTGACAACGTCTCTGTCAG--------------TA--------------T--------------GTCCAACTTATTATGT--------------TGTATTTAATCTTTG-TT
gi|45958 : CAGTGC-TCCAAGAAAAAAA------------AAAATT----TG--GACT---AGCC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTG-----------------------CCCTG-ATTTTT-ATTACC--AATAC------ACTTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATCAA--T-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGAG--AGAAGCGAGAG-AA-TTTT-GG-GAG-AACTGAC--TGTCTCTATCAG--------------TA--------------T--------------A--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45957 : CAGTGC-TCCAAGAAAAAGA------------ACATTT----GG--GACT---AGCC------CATGGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------TCCTTGCGGTATAATATGAAATTTGTTA------A------CATA----GAC----------------TTAAATGTGTT-A--T-T-AT-A--TGTAGGGTTTGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC-----------AGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTGC-AA-GAG-AACTGACTATGTATCTATCAGTATGCCCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45952 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AG--------------------GGATT------TTTTC-AA-TCTACTTGCCCTGGCTGA--AAAA-ATAACTTGCCCT--GATCAACAGTTTACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTCGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGTT-AGCTCCCCTTAATATTATG------CA------TGTCG--AAA-TCAT--AAGTTTTAGAGTTTGAATAAGAC--CAGG--AGAAGTGAGAG-AA-TTTC-AG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATGTTTG-TTCTTTATT
gi|45959 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---AGCC------CA-GGGC-AAGTAAGTT------GAAAA-AA-TCT-TTTGCCCTGGCTG---AAAA--TAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGGGGTATTATATGAAAAATGTAA------A------CATA----GAC----------------TTTAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTTACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGGTTGAATAAGAC--CAGG--AGAAGTGAGAG-AA-TTTC-GG-GAG-AACTGACTTTGTCTCTATCA
gi|45956 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----
gi|45960 : CAGTGC-TCCAAAAAAAAAATACAAAAAATAAAAATTG----GG--GA----------------A-GGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGTGCAG-ATTTTT-ATTACC--AATAC------ACCTAGTGGTATTATATGAAGTATGTTA------ACATT--CATA----GAC----------------TTAAATGTATTAA--T-T-TT-T--TGTAGGGTTATCTCCCCATAACATTATG------CA------TGTCT--TAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--TGGG--AGAAGTGAGAG-AA-TTTC-AG-GAATAACTGACTACGTCTCTATCAG--------------TATGCCCAACTTATGTT--------------G--------------T--------------TGTATTTCATCTCTG-TTCTtcaatctacttgccctgactgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtagggtaagcttccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcaggagaactgactttgtctctatcagtttgttgtatttaatctttgttctttatt
gi|45961 : CAGTGA-TCCAAGAAAATAA---------------TTT----GG--GATT---AGCC------CA-GGGC-AATTAAGTT------GAAAAAAA-TCTACTTTCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGATTCACTTGCTGAG-ATTTTT-ATTACC--AATACATTTAAATTTTGCGGTATAATATTAATTATGTAATATCTCA------CATA----CACATACACATACATATAATTAAATGTATTAAT-T-T-TT-A--TGTGGGGTAAGTTCCCTTTAACATAATG------CA------TGTAT--AAA-TCAC--AAGTATTAAAGTTTGAATAAGAT--TGGG--AGAAGTGAGAG-AA-ATTCAGG-GAG-AAATGACTA-GTCTCTATCAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTATTTATTCTTT--TTATTAATT
gi|45962 : CAGTGC-TCCAAGATAAAAA------------A--TTT----GGC-AACT---AGCC------CA-GGAC-AAGCAGGTT------GAAAA-AA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCGCTTACCCA
gi|45963 : CAGGGC-TACAATATAAAAA------------AAATAG----GG--GAC---------------A-GGACCAAGT----T------GAAAA-AA-TCTACTTTCCCTGGCTGAAAAAAA-ATGACATGCCCTCAGATTAAAGGTTCACTTGCCTAG-ATTATT-AATACC--AATAT------AGCTttaataaaatgtatcaatttttatgtagggttaaatccccttaacattatattttattatattttgaaatagaagttttataatttatacatacttaagacc
gi|45964 : CAGTGC-TCCAAGAAAAAAA------------AAAT------GG--GACT---AGCC------CA-GGGC-AAGTAGGTT------GAAAA-AA-T
gi|45950 : CAGTACATCCAAGAAAA------------------TTTTAATGGCAGACA---GGCC------TA-GTGC-AAGTAACTT------TTAAA-AA-G-TACTTGCCC-GACCC---AAAATTTAATTTGCCAT--GAAAAAAAGTTAATATACCCAGCATTTTT-
gi|45965 : CAGTGC-TCCAAGAAAAAAA------------AAATTT----GG--GACT---
gi|45966 : C-CCCGGGGAAAAAA------------AAATTT----GG--GACT---AACC------CA-GGGC-AAGTAGGTT------GAAAA-AA-TCTACTTGCCCTGTCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATTTTTTA------A------CATA-----------------------------GTGTTAA--T-T-CT-A--TGTAGGGTTAGCTCCCCTTAATATTATG------CA------TGTCT--AAA-TGAC--AAGTTTTAGAGTTTGAATAAGAC--TGGG--AGAAGTCAGAG-AA-TTTC-AG-GAG-AACTGACTACATCTCTATCAG--------------TA--------------T--------------GCCCAACTTATTATAT--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45954 : AATAA------------AAATCT----GG--GCATGTGAACCGTTGATCA-GGGC-AAGTAGATT------TTTTC-AA-TCTACTTGCCCTGG
gi|45967 : cagtgctccaagaaaaaaaaattttgtgactagcAA------------AAATTTAAT-GGCAGACA---GGCC------CA-GGGC-AAGTAACTT------TTGAA-AA-TGTACTTGCCTTGACCA---AAAT-TTTACTTGCCCT--GA-AAAAAGTTAACATGCCCAATATTTTTCATT-CCTGAATAC------A-------GTACAATTTGAaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattcattttatgtagggtaagcttcccataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcgggagaactgactatgtctctatcagtatgttgtatttaatctttgttcttaatt
gi|45967 : A------------AAATTT----TG--G---------T------CA-AGGC-AAGTACATT------TTCAA-AA-GTTACTTGCCCTGG
gi|45947 : aaaaatttaatggcagacaggcC------CA-GGGC-AAGTAGATT------TTTTC-AA-TCTACTTGCCCTGGacttgccctgaaaaaagttaacatgcccaatatttttcattcctgaatacagtacaatttga
gi|45948 : cagtgctccaagaaaaaaaaatttgggactagcC------CA-GGGC-AAGTAGATTTTTTTC------AA-CCTACTTGCCCTGctgaaaaataacttgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacataaacatagacttaaatgtattcattttatgtagggtaagctccccataacattatgcatgtctaaatcacaagttttagagtttgaataagactgggagaagtgagagaattttgggagaactgactatgtctctatcagtatgttgtatttaatctttgttctttatt
gi|45958 : cagtgctccaagaaaaaaaaaatttgggactagC------CA-GGGC-AAGTAGATT------TTTTC-AA-TCTACTTGCCCTGGctgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacgtagacttaaatgtattaattttatgtagggttagctccccttaattttatgcatgtctaaatcaccagttttaaagtttgaataagactgggagcagggagagaatttcagaagaactgactacgtctctgtcagtatgtccaacttattatgttgtatttaatctttgttctttatt
gi|45952 : cagtgctccaagaaaaaaaaaaatttggactagcC------CA-GGGC-AAGTAGATT------GAAAA-AA-TCctgaaaaataacttgccctgatttttattaccaatacactttgcggtataatatgaaatatgtaaacatagacttaaatgtatcaattttatgtagggtaagctccccataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgagagaagcgagagaattttgggagaactgactgtctctatcagtatattgtatttaatctttgttctttatt
gi|45946 : cagtgctccaagaaaaaaaaaatttgggactagg------CA-GGGC-AAGTAGATT------TTTTC-AA-TCTACTTGCCCTGGctgaaaaaataacttgccctgatcaacagtttacatgcccagatttttattaccaatacacctcgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtaggttagctccccttaatattatgcatgtcgaaatcataagttttagagtttgaataagaccaggagaagtgagagaatttcaggagaactgactatgtctctatcagtatgttgtatttaatgtttgttctttatt
gi|45956 : cagtgctccaagaaaaaaaaaatttgggactagc------CA-GGGC-AAGTAGATT------GAAAA-actgaaaaataacttgccctgatcaacggttcacatgccaagatttgtattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattcattttatgtagggtaagctcccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccaggagaagtgagagaaattcgggagaactgactatgtctctatcagtatgttgtatttaatctttgttctttatt
gi|45968 : cagtgctccaagaaaaaaaaaaAAA-AA-TCTACATGCCCTGGCTG---AA----TAACTTGCCCT--GATCAACGGTTCACACGCCCAG-ACTTTT-ATTACC--AATAC------GCCTTGCTGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGCATTCA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTTTG------CATGCGACTGTCT--AAA-TCAC--AAGTTTTAAAGTTTAAATAAAAC--CGGG--AGAAGTGAGAG-AA-TTTCAGG-GAG-AACTGACTACGTGTTTATCAGTATGCCAAACTTATTA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATTactgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtagggtaagcttccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcaggagaactgactttgtctctatcagtttgttgtatttaatctttgttctttatt
gi|45956 : -AA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATAC------ACCTTGCGGTATAATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGGTAAGCTTCCAATAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTTC-AG-GAG-AACTGACTTTGTCTCTATCAG--------------TT--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45969 : cagtgctccaagaaaaaaaaaattttcGCTG---AAAA-ATAGCTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTGT-ATTACC--AATAC------ACTTTGCGG---AATATGAAATATGTAA------C------TATA----GAA----------------CTGACTGT
gi|45970 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATAA------ACTTTGCGGTATACTATAAAATAATTAA------A------CATAAATAGAC----------------TTAAATGTATTAA--T-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCAC--AAGTTTTAGAATTTGAACAAAAC--CGGG--AGAAGTGAAAG-AA-TTTCAGG-GAG-AACTGAC--TGTCTCTATAAGTATGACCGACTTATTA--------------T--------------G--------------T--------------TGTATTTAGTCTTTG-TTCTTTATT
gi|45972 : TAACTT-CCCT--AATCAAAGGTTCACTTGCCCAA-ATTTTT-ATTACC--AATAC------ACTTTGCGGTATAATATAAAATATTTAA------A------CATAAATAGAC----------------TTAATTGTATTAA--C-TGTC-A--TGTAGGTTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCAC--AAGTTTAAGTGTTTGGAAAAGAT--CAGG--AGAAGTGAGAG-AA-TTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAGTCTTTG-TTCTTCATT
gi|45971 : TAACTTGCTCT--GATAAAAAATTCACTTGCCCAG-ATTTTT-ATTACC--AATAA------ACTTTGTGGTATAATATAAAATATTTAA------A------CATAAATAGAC----------------TTAAATGTATTAA--T-T-TTTA--CATAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCGC--AAGTTTGAGAGTGTGAATAAAAC--CGGG--AGAAGTGAGAG-AA-TTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACCGACTTATTA--------------T--------------G--------------T--------------TGTATTTTGTCTTTGTTTCTTTATT
gi|45974 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATAC------ACTTTGCGGTATAATATAAAATAATTAA------A------TATAAATAGAT----------------TTAAATGCATTAA--T-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCAC--AAGATTTAGAGTTTGAATAAGAC--CGGA--AGAAGTGAGAGAAA-TCTCTGG-GAG-AACTGACTATGTCTCTATAAG--------------AA--------------T--------------G--------------
gi|45973 : TAACTTGCCCT--GATCAAAGAT-CACTTGCCAAG-ATTTTT-ATTACC--AATAC------ACTTTGCAGTAAAATATAAAATAATTAA------A------CATAAATAGAC----------------CTAAATGTATTAA--TAT-TT-A--TGTAAGGTTAGCTCCCTATAACATTATG------CA------TGTGT--AAA-TCAC--AAGTTTTAGAGTTTGAGCAAGAC--CAGG--AGAAGTGAGAG-AA-TTTC-AGTGAG-AACTGACTTTGTCTCTATAAG--------------TA--------------TGACCAACTTATTAAG--------------C--------------TGTATTTTGTCTTTG-TTCTTTATT
gi|45976 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAAC------TCCTTGCGGTATAATATGAAATTTGTTA------A------CATA----GAC----------------TTAAATGTGTTAA--T-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
gi|45975 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAAC------TCCTTGCGGTATAATATGAAATTTGTTA------A------CATA----GAC----------------TTAAATGTGTTAA--T-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAT-AA-TTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCCAACTTATTA--------------T--------------G--------------T--------------TGTATCTAATCTTTG-TTCTTTATT
gi|45977 : AATATGAAATATGTAA------A------CATA----GAC----------------TTAAATGTATTAA--T-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CGGG--AGAAGTGAGAG-AA-TTTA-GG-GAG-AACTGACTATGTCT--GTCAG--------------TA--------------T--------------G--------------TCCAACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45962 : AAATGTAT-CAATT-T-TT-A--TGTAGGGTTAAATCCCCTTAACATTATATTTTATTA------TATTTTGAAA-T-AG--AAGTTTTATAATTT
gi|45981 : cagtgctccaagataaaaaatttggcaactagcccaggacaagcaggttgaaaaaatctacttgcactggctgaaaaataacttgccctgatcaaaggttcgcttacccattaata--T-T-TT-AAATGTAGGGTTATCTCCTCTTTACATTATG------CA------TGTGT--AAAATCAC--AAGTATTAGAGTTTGAATAAGAT--AGGT--AGAAGTGAGAGAAA-TTTT-GG-GAG-AAGTGAATATTTCTCTATTAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAGTCTTTG-TTCTTTATTatacatacttaagacc
gi|45982 : --T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCAC--AATTATTAGAGTTTGAATAAGAT--AGGT--AGAAGTGAGAA-AA-ATTCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTGTTTAGTCTTTT-TTCTTTATT
gi|45983 : --T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TAAC--AAGAATTAGAGTTTGAATAAGAT--AAGT--AGAAGTGAGAG-AA-TATCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTGTTTAGTCTTTG-TTCTTTATT
gi|45984 : --T-T-TT-AA-TGTCGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCAC--AAATATTAGAGTTTGAATAAGAT--AGGT--AGAAATGAGAA-AA-TTTCAGG-GAG-AAGTGAACAT-TCTCTATCAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTGTTTAGTCTTTG-TTATTTATT
gi|45979 : --T-T-TT-AA-CATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCAC--AAGTTTTAGAGTTTGAATCAGAT--AGGT--AGAA-TGAGAG-AAATTGA-GG-GAG-AAGTGAATAT-TCTCTATCAG--------------TA--------------T--------------GACCATCTTATTATGT--------------TGTGTTTAGTCTTTG-TTCTTTATT
gi|45980 : --T-T-TT-AA-TGTACAGTTATCTCCTCTTTACATTATA------CA------TGTGT--AAA-TCACAAAAGTATTAGAGTTTAAATAAGATAGTGAGGTAGAAGTAAGAT-AA-ATTCAGG-GAG-AAATGAATATTTCTCTATCAGTATGACCAACTTATTA--------------T--------------G--------------T--------------TGTATTTAGTCTTTG-TTCTTAATT
gi|45978 : -T-TT-A--TGTAGGGTAAGCTCCCCATAACAATATG------CA------TGTCT--AAA-TCAC--AAGTTTTAGAGTTTGAATAAGAC--CAGG--AGAAGTGAGAG-CA-GTTC-GG-GAG-AACTGACTATGTCTCTATCAG--------------TA--------------T--------------G--------------T--------------TGTATTTAATCTTTG-TTCTTTATT
Alignments
lowQualScore : 1111 1 2
lowQualScore : 1 3333 888888888888 333 66 1 3 333 3 11 1 2 1 22 444444 777777777777 777777 5555 6666666666 2 1 5 77 1 333333 333333 11 1 11 333333 222 1 3 3 1 1 2 7 1 1
lowQualScore : . .... ............ ... .. . . ... . .. . . . .. ...... ............ ...... .... .......... . . . .. . ...... ...... .. . .. ...... ... . . . . . . . . .
lowQualScore : 8 9999 999999999999 000 88 9 5 000 5 88 1 8 4 00 111111 666666666666 444444 7777 5555555555 4 2 9 55 7 444444 444444 66 2 66 444444 111 2 6 3 2 2 5 5 3 3
consensus : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
Reference ( family-539 ) : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45945 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATTTGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45946 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCAAG-ATTTGT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AAATTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45947 : CAGTGC-TCCAAGAAAA----AAA------------AA-TTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTG-------ATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------ACATAAACATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTT-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45948 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGC--A-GGGCAAGTAGGTTGAAAAAAATCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTTATG------CA------TGTCT--AAA-TCACCA--GTTTTAAAGTTTGAA------TAAGACTG---GG-AGCAGGGAGAG-AATTTC-AG-AAG-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45949 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCCG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTTAACTCCCCTTAATTTTATG------CA------TTACT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG--GAAGGGAGAG-AATTTC-GG-GAT-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45950 : CAGTACATCCAAGAAAATTTTAA------------------T---GGCAGACAGGCCTA-GTGCAAGTAACTTTTAAAAA-G-TACTTGCCC-GACCC---AAAATTTAATTTGCCAT--GAAAAAAAGTTAATATACCCAGCATTTTT-
gi|45951 : CAGTGC-TCCAAGAAAA----AAA------------AA--TG---GG--GACTAGCCCA-GAGCAAGTAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGACCAG-ATTTGT-ATTACC--AAAACACCT------TGCGGTATAATATGAGATATGTAA------------A------CATA----GAC----------TGAAATGTAATAATGT-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAG-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTCTCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCCTTG-TTCTTTATT
gi|45952 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAG------GG---ATTTTTTCAA-----TCTACTTGCCCTGGCTG---AAAAAATAACTTGCCCT--GATCAACAGTTTACATGCCCAG-ATTTTT-ATTACC--AATACACCT------CGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTA-GGTTAGCTCCCCTTAATATTATG------CA------TGTCG--AAA-TCATAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATGTTTG-TTCTTTATT
gi|45953 : CAGTGC-TCCAAGAAAA-----AA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTT---AAAA-ATAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACT--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTGATG------CA------TGTCT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGGGAGAG-AATTTC-AG-AAG-AACTGACAACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TT
gi|45954 : CAGTGC-TCCAAGAAAA----AAA------------AATTTT---GT--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTT-------------------------GCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTTCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTAATT
gi|45955 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-ACTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTT--------TA----------G-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45956 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---
gi|45956 : AA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTAAGCTTCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTTTGTCTCTATCAGT-T--------------TGTTGTATTTAATCTTTG-TTCTTTATTtcaatctacttgccctgactgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtagggtaagcttccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcaggagaactgactttgtctctatcagtttgttgtatttaatctttgttctttatt
gi|45957 : cagtgctccaagaaaaaaaaaattttcCAGTGC-TCCAAGAAAA----AGA------------ACATTT---GG--GACTAGCCCATGGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTT-AT-T-AT-A--TGTAGGGTTTGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC-----------AGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AA-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45958 : CAGTGC-TCCAAGAAAA----AAA------------AAAATT---TG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GAT----------------------TTTT-ATTACC--AATACACTT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATCAAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---AG-AGAAGCGAGAG-AATTTT-GG-GAG-AACTGAC--TGTCTCTATCAG---------------TATATTGTATTTAATCTTTG-TTCTTTATT
gi|45959 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAAGTTGAAAAAA-TCT-TTTGCCCTGGCTG---AAAA--TAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGGGGTATTATATGAAAAATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTTACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGGTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTTTGTCTCTATCA
gi|45960 : CAGTGC-TCCAAAAAAA----AAATACAAAAAATAAAAATTG---GG--GA-------A-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGTGCAG-ATTTTT-ATTACC--AATACACCT------AGTGGTATTATATGAAGTATGTTA------------ACATT--CATA----GAC----------TTAAATGTATTAAT-T-TT-T--TGTAGGGTTATCTCCCCATAACATTATG------CA------TGTCT--TAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-AG-GAATAACTGACTACGTCTCTATCAGTATGCCC-AACTTATGTTGTTGTATTTCATCTCTG-TTCT
gi|45961 : CAGTGA-TCCAAGAAAA----TAA---------------TTT---GG--GATTAGCCCA-GGGCAATTAAGTTGAAAAAAATCTACTTTCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGATTCACTTGCTGAG-ATTTTT-ATTACC--AATACATTTAAATTTTGCGGTATAATATTAATTATGTAATATCTCACATACA------CATA----CACATACATATAATTAAATGTATTAAT-T-TTTA--TGTGGGGTAAGTTCCCTTTAACATAATG------CA------TGTAT--AAA-TCACAA--GTATTAAAGTTTGAA------TAAGATTG---GG-AGAAGTGAGAG-AAATTCAGG-GAG-AAATGACTA-GTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTATTCTTT--TTATTAATT
gi|45962 : CAGTGC-TCCAAGATAA----AAA------------A--TTT---GGC-AACTAGCCCA-GGACAAGCAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCGCTTACCCA
gi|45962 : AAATGTATCAAT-T-TTTA--TGTAGGGTTAAATCCCCTTAACATTATATTTTATTA------TATTTTGAAA-T-AGAA--GTTTTATAATTTATACATACTTAAGACCttaataaaatgtatcaatttttatgtagggttaaatccccttaacattatattttattatattttgaaatagaagttttataatttatacatacttaagacc
gi|45963 : cagtgctccaagataaaaaatttggcaactagcccaggacaagcaggttgaaaaaatctacttgcactggctgaaaaataacttgccctgatcaaaggttcgcttacccattaataCAGGGC-TACAATATAA----AAA------------AAATAG---GG--GAC------A-GGAC---CAAGTTGAAAAAA-TCTACTTTCCCTGGCTGAAAAAAA-ATGACATGCCCTCAGATTAAAGGTTCACTTGCCTAG-ATTATT-AATACC--AATATAGCT------
gi|45964 : CAGTGC-TCCAAGAAAA----AAA------------AAAT-----GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-T
gi|45965 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACT
gi|45966 : C-CCCGGGGAAA----AAA------------AAATTT---GG--GACTAACCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGTCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATTTTTTA------------A------CATA-----------------------GTGTTAAT-T-CT-A--TGTAGGGTTAGCTCCCCTTAATATTATG------CA------TGTCT--AAA-TGACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTCAGAG-AATTTC-AG-GAG-AACTGACTACATCTCTATCAGTATGCCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45967 : AA------------AAATTTAATGGCAGACAGGCCCA-GGGCAAGTAACTTTTGAAAA-TGTACTTGCCTTGACCA---AAAT-TTTACTTGCCCT--GA-AAAAAGTTAACATGCCCAATATTTTTCATT-CCTGAATACA-------------GTACAATTTGA
gi|45968 : AAAAA-TCTACATGCCCTGGCTG---AA----TAACTTGCCCT--GATCAACGGTTCACACGCCCAG-ACTTTT-ATTACC--AATACGCCT------TGCTGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGCATTCAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTTTG------CATGCGACTGTCT--AAA-TCACAA--GTTTTAAAGTTTAAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTGTTTATCAGTATG-CCAAACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45969 : GCTG---AAAA-ATAGCTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTGT-ATTACC--AATACACTT------TGCGG---AATATGAAATATGTAA------------C------TATA----GAA----------CTGACTGT
gi|45970 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGCGGTATACTATAAAATAATTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAATTTGAA------CAAAACCG---GG-AGAAGTGAAAG-AATTTCAGG-GAG-AACTGAC--TGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45971 : TAACTTGCTCT--GATAAAAAATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGTGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--CATAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCGCAA--GTTTGAGAGTGTGAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTTGTCTTTGTTTCTTTATT
gi|45972 : TAACTT-CCCT--AATCAAAGGTTCACTTGCCCAA-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAATTGTATTAAC-TGTC-A--TGTAGGTTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTAAGTGTTTGGA------AAAGATCA---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTCATT
gi|45973 : TAACTTGCCCT--GATCAAAGAT-CACTTGCCAAG-ATTTTT-ATTACC--AATACACTT------TGCAGTAAAATATAAAATAATTAA------------A------CATAAATAGAC----------CTAAATGTATTAATAT-TT-A--TGTAAGGTTAGCTCCCTATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAG------CAAGACCA---GG-AGAAGTGAGAG-AATTTC-AGTGAG-AACTGACTTTGTCTCTATAAGTATGACC-AACTTATTAAGCTGTATTTTGTCTTTG-TTCTTTATT
gi|45974 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATAATTAA------------A------TATAAATAGAT----------TTAAATGCATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GATTTAGAGTTTGAA------TAAGACCG---GA-AGAAGTGAGAGAAATCTCTGG-GAG-AACTGACTATGTCTCTATAAGAATG-
gi|45975 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAT-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATCTAATCTTTG-TTCTTTATT
gi|45976 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45977 : AATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATG--TCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45978 : AAA-T-TT-A--TGTAGGGTAAGCTCCCCATAACAATATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-CAGTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45979 : T-T-TT-AA-CATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAA------TCAGATAG---GT-AGAA-TGAGAGAAATTGA-GG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-ATCTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45980 : T-T-TT-AA-TGTACAGTTATCTCCTCTTTACATTATA------CA------TGTGT--AAA-TCACAAAAGTATTAGAGTTTAAA------TAAGATAGTGAGGTAGAAGTAAGAT-AAATTCAGG-GAG-AAATGAATATTTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTAATT
gi|45981 : T-T-TT-AAATGTAGGGTTATCTCCTCTTTACATTATG------CA------TGTGT--AAAATCACAA--GTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAGAAATTTT-GG-GAG-AAGTGAATATTTCTCTATTAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45982 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--TTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAA-AAATTCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTT-TTCTTTATT
gi|45983 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TAACAA--GAATTAGAGTTTGAA------TAAGATAA---GT-AGAAGTGAGAG-AATATCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45984 : T-T-TT-AA-TGTCGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--ATATTAGAGTTTGAA------TAAGATAG---GT-AGAAATGAGAA-AATTTCAGG-GAG-AAGTGAACAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTATTTATT
Alignments
lowQualScore : 1111 1 2
lowQualScore : 1 3333 888888888888 333 66 1 3 333 3 11 1 2 1 22 444444 777777777777 777777 5555 6666666666 2 1 5 77 1 333333 333333 11 1 11 333333 222 1 3 3 1 1 2 7 1 1
lowQualScore : . .... ............ ... .. . . ... . .. . . . .. ...... ............ ...... .... .......... . . . .. . ...... ...... .. . .. ...... ... . . . . . . . . .
lowQualScore : 8 9999 999999999999 000 88 9 5 000 5 88 1 8 4 00 111111 666666666666 444444 7777 5555555555 4 2 9 55 7 444444 444444 66 2 66 444444 111 2 6 3 2 2 5 5 3 3
consensus : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
Reference ( family-539 ) : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45945 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATTTGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45946 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCAAG-ATTTGT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AAATTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45947 : CAGTGC-TCCAAGAAAA----AAA------------AA-TTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTG-------ATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------ACATAAACATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTT-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45948 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGC--A-GGGCAAGTAGGTTGAAAAAAATCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTTATG------CA------TGTCT--AAA-TCACCA--GTTTTAAAGTTTGAA------TAAGACTG---GG-AGCAGGGAGAG-AATTTC-AG-AAG-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45949 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCCG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTTAACTCCCCTTAATTTTATG------CA------TTACT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG--GAAGGGAGAG-AATTTC-GG-GAT-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45950 : CAGTACATCCAAGAAAATTTTAA------------------T---GGCAGACAGGCCTA-GTGCAAGTAACTTTTAAAAA-G-TACTTGCCC-GACCC---AAAATTTAATTTGCCAT--GAAAAAAAGTTAATATACCCAGCATTTTT-
gi|45951 : CAGTGC-TCCAAGAAAA----AAA------------AA--TG---GG--GACTAGCCCA-GAGCAAGTAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGACCAG-ATTTGT-ATTACC--AAAACACCT------TGCGGTATAATATGAGATATGTAA------------A------CATA----GAC----------TGAAATGTAATAATGT-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAG-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTCTCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCCTTG-TTCTTTATT
gi|45952 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAG------GG---ATTTTTTCAA-----TCTACTTGCCCTGGCTG---AAAAAATAACTTGCCCT--GATCAACAGTTTACATGCCCAG-ATTTTT-ATTACC--AATACACCT------CGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTA-GGTTAGCTCCCCTTAATATTATG------CA------TGTCG--AAA-TCATAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATGTTTG-TTCTTTATT
gi|45953 : CAGTGC-TCCAAGAAAA-----AA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTT---AAAA-ATAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACT--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTGATG------CA------TGTCT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGGGAGAG-AATTTC-AG-AAG-AACTGACAACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TT
gi|45954 : CAGTGC-TCCAAGAAAA----AAA------------AATTTT---GT--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTT-------------------------GCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTTCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTAATT
gi|45955 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-ACTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTT--------TA----------G-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45956 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---
gi|45956 : AA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTAAGCTTCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTTTGTCTCTATCAGT-T--------------TGTTGTATTTAATCTTTG-TTCTTTATTtcaatctacttgccctgactgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtagggtaagcttccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcaggagaactgactttgtctctatcagtttgttgtatttaatctttgttctttatt
gi|45957 : cagtgctccaagaaaaaaaaaattttcCAGTGC-TCCAAGAAAA----AGA------------ACATTT---GG--GACTAGCCCATGGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTT-AT-T-AT-A--TGTAGGGTTTGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC-----------AGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AA-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45958 : CAGTGC-TCCAAGAAAA----AAA------------AAAATT---TG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GAT----------------------TTTT-ATTACC--AATACACTT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATCAAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---AG-AGAAGCGAGAG-AATTTT-GG-GAG-AACTGAC--TGTCTCTATCAG---------------TATATTGTATTTAATCTTTG-TTCTTTATT
gi|45959 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAAGTTGAAAAAA-TCT-TTTGCCCTGGCTG---AAAA--TAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGGGGTATTATATGAAAAATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTTACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGGTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTTTGTCTCTATCA
gi|45960 : CAGTGC-TCCAAAAAAA----AAATACAAAAAATAAAAATTG---GG--GA-------A-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGTGCAG-ATTTTT-ATTACC--AATACACCT------AGTGGTATTATATGAAGTATGTTA------------ACATT--CATA----GAC----------TTAAATGTATTAAT-T-TT-T--TGTAGGGTTATCTCCCCATAACATTATG------CA------TGTCT--TAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-AG-GAATAACTGACTACGTCTCTATCAGTATGCCC-AACTTATGTTGTTGTATTTCATCTCTG-TTCT
gi|45961 : CAGTGA-TCCAAGAAAA----TAA---------------TTT---GG--GATTAGCCCA-GGGCAATTAAGTTGAAAAAAATCTACTTTCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGATTCACTTGCTGAG-ATTTTT-ATTACC--AATACATTTAAATTTTGCGGTATAATATTAATTATGTAATATCTCACATACA------CATA----CACATACATATAATTAAATGTATTAAT-T-TTTA--TGTGGGGTAAGTTCCCTTTAACATAATG------CA------TGTAT--AAA-TCACAA--GTATTAAAGTTTGAA------TAAGATTG---GG-AGAAGTGAGAG-AAATTCAGG-GAG-AAATGACTA-GTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTATTCTTT--TTATTAATT
gi|45962 : CAGTGC-TCCAAGATAA----AAA------------A--TTT---GGC-AACTAGCCCA-GGACAAGCAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCGCTTACCCA
gi|45962 : AAATGTATCAAT-T-TTTA--TGTAGGGTTAAATCCCCTTAACATTATATTTTATTA------TATTTTGAAA-T-AGAA--GTTTTATAATTTATACATACTTAAGACCttaataaaatgtatcaatttttatgtagggttaaatccccttaacattatattttattatattttgaaatagaagttttataatttatacatacttaagacc
gi|45963 : cagtgctccaagataaaaaatttggcaactagcccaggacaagcaggttgaaaaaatctacttgcactggctgaaaaataacttgccctgatcaaaggttcgcttacccattaataCAGGGC-TACAATATAA----AAA------------AAATAG---GG--GAC------A-GGAC---CAAGTTGAAAAAA-TCTACTTTCCCTGGCTGAAAAAAA-ATGACATGCCCTCAGATTAAAGGTTCACTTGCCTAG-ATTATT-AATACC--AATATAGCT------
gi|45964 : CAGTGC-TCCAAGAAAA----AAA------------AAAT-----GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-T
gi|45965 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACT
gi|45966 : C-CCCGGGGAAA----AAA------------AAATTT---GG--GACTAACCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGTCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATTTTTTA------------A------CATA-----------------------GTGTTAAT-T-CT-A--TGTAGGGTTAGCTCCCCTTAATATTATG------CA------TGTCT--AAA-TGACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTCAGAG-AATTTC-AG-GAG-AACTGACTACATCTCTATCAGTATGCCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45967 : AA------------AAATTTAATGGCAGACAGGCCCA-GGGCAAGTAACTTTTGAAAA-TGTACTTGCCTTGACCA---AAAT-TTTACTTGCCCT--GA-AAAAAGTTAACATGCCCAATATTTTTCATT-CCTGAATACA-------------GTACAATTTGA
gi|45968 : AAAAA-TCTACATGCCCTGGCTG---AA----TAACTTGCCCT--GATCAACGGTTCACACGCCCAG-ACTTTT-ATTACC--AATACGCCT------TGCTGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGCATTCAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTTTG------CATGCGACTGTCT--AAA-TCACAA--GTTTTAAAGTTTAAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTGTTTATCAGTATG-CCAAACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45969 : GCTG---AAAA-ATAGCTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTGT-ATTACC--AATACACTT------TGCGG---AATATGAAATATGTAA------------C------TATA----GAA----------CTGACTGT
gi|45970 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGCGGTATACTATAAAATAATTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAATTTGAA------CAAAACCG---GG-AGAAGTGAAAG-AATTTCAGG-GAG-AACTGAC--TGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45971 : TAACTTGCTCT--GATAAAAAATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGTGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--CATAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCGCAA--GTTTGAGAGTGTGAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTTGTCTTTGTTTCTTTATT
gi|45972 : TAACTT-CCCT--AATCAAAGGTTCACTTGCCCAA-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAATTGTATTAAC-TGTC-A--TGTAGGTTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTAAGTGTTTGGA------AAAGATCA---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTCATT
gi|45973 : TAACTTGCCCT--GATCAAAGAT-CACTTGCCAAG-ATTTTT-ATTACC--AATACACTT------TGCAGTAAAATATAAAATAATTAA------------A------CATAAATAGAC----------CTAAATGTATTAATAT-TT-A--TGTAAGGTTAGCTCCCTATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAG------CAAGACCA---GG-AGAAGTGAGAG-AATTTC-AGTGAG-AACTGACTTTGTCTCTATAAGTATGACC-AACTTATTAAGCTGTATTTTGTCTTTG-TTCTTTATT
gi|45974 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATAATTAA------------A------TATAAATAGAT----------TTAAATGCATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GATTTAGAGTTTGAA------TAAGACCG---GA-AGAAGTGAGAGAAATCTCTGG-GAG-AACTGACTATGTCTCTATAAGAATG-
gi|45975 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAT-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATCTAATCTTTG-TTCTTTATT
gi|45976 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45977 : AATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATG--TCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45978 : AAA-T-TT-A--TGTAGGGTAAGCTCCCCATAACAATATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-CAGTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45979 : T-T-TT-AA-CATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAA------TCAGATAG---GT-AGAA-TGAGAGAAATTGA-GG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-ATCTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45980 : T-T-TT-AA-TGTACAGTTATCTCCTCTTTACATTATA------CA------TGTGT--AAA-TCACAAAAGTATTAGAGTTTAAA------TAAGATAGTGAGGTAGAAGTAAGAT-AAATTCAGG-GAG-AAATGAATATTTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTAATT
gi|45981 : T-T-TT-AAATGTAGGGTTATCTCCTCTTTACATTATG------CA------TGTGT--AAAATCACAA--GTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAGAAATTTT-GG-GAG-AAGTGAATATTTCTCTATTAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45982 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--TTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAA-AAATTCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTT-TTCTTTATT
gi|45983 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TAACAA--GAATTAGAGTTTGAA------TAAGATAA---GT-AGAAGTGAGAG-AATATCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45984 : T-T-TT-AA-TGTCGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--ATATTAGAGTTTGAA------TAAGATAG---GT-AGAAATGAGAA-AATTTCAGG-GAG-AAGTGAACAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTATTTATT
blockSeqs : A TTTT TACAAAAAATAA AAT CA T A AAA T CA C C C TG AAATTT TATCTCACATAC CATAAA AATA ATACATATAA G G T AA A TTTTAT TGCGAC TG A AA CATACT TGA T A A T T T T A T
blockSeqs : . . . . CA . A . A . C T . . . . CATT AATA . A . T A A . . . . . . . . A A . . T T . .
blockSeqs : . . . . C . . . . . C . . . . . . AATA . . . T A T . . . . . . . . A A . . T C . .
blockSeqs : . . . . . . . . . . C . . . . . . AATA . . . T A T . . . . . . . . . A . . T T . .
blockSeqs : . . . . . . . . . . A . . . . . . AATA . . . T A T . . . . . . . . . A . . T T . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . A T . . . . . . . . . A . . T C . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . T . . . . . . . . . T . . T C . .
blockSeqs : . . . . . . . . . . T . . . . . . . . . . . . A . . . . . . . . . A . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . T . . . . . . . . . A . . T C . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . A . . . . . . . . . A . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . A . . . . . . . . . A . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . A . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . T . . . . . . . . . . . . T . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . A . . . . . . . . . . . . T C . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . T . . . . . . . . . . . . T C . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . T . . . . . . . . . . . . A T . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . T . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . T . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . A . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . C . . . . . . . . . . . . A . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . C . . . . . . . . . . . . A . . . . . . . . . . . . T A . .
blockSeqs : . . . . . . A . . . . . . . . . . . . A . . . . . . . . . . . . T A . .
blockSeqs : . A . . . . . . . . . . . . A . . . . . . . . . . . . T . . .
blockSeqs : . A . . . . . . . . . . . . T . . . . . . . . . . . . T . . .
blockSeqs : . A . . . . . . . . . . . . T . . . . . . . . . . . . T . . .
blockSeqs : . A . . . . . . . . . . . . T . . . . . . . . . . . . . . . .
blockSeqs : . C . . . . . . . . A . . . . . . . . . . . . . . . .
blockSeqs : . C . . . . . . T . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . T . . . . . . . . . . . . . . . .
blockSeqs : . . . . T . . . . . . . . . . . . . . . .
blockSeqs : . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . T . . . . . . . . . . . .
blockSeqs : . . . . T . . . . . .
blockSeqCons :
originalCons : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
finalCons : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
Alignments
lowQualScore : 1111 1 2
lowQualScore : 1 3333 888888888888 333 66 1 3 333 3 11 1 2 1 22 444444 777777777777 777777 5555 6666666666 2 1 5 77 1 333333 333333 11 1 11 333333 222 1 3 3 1 1 2 7 1 1
lowQualScore : . .... ............ ... .. . . ... . .. . . . .. ...... ............ ...... .... .......... . . . .. . ...... ...... .. . .. ...... ... . . . . . . . . .
lowQualScore : 8 9999 999999999999 000 88 9 5 000 5 88 1 8 4 00 111111 666666666666 444444 7777 5555555555 4 2 9 55 7 444444 444444 66 2 66 444444 111 2 6 3 2 2 5 5 3 3
consensus : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
Reference ( family-539 ) : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAGTATG-CC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45945 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATTTGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45946 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCAAG-ATTTGT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AAATTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45947 : CAGTGC-TCCAAGAAAA----AAA------------AA-TTT---GG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTG-------ATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------ACATAAACATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTT-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45948 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGC--A-GGGCAAGTAGGTTGAAAAAAATCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTTATG------CA------TGTCT--AAA-TCACCA--GTTTTAAAGTTTGAA------TAAGACTG---GG-AGCAGGGAGAG-AATTTC-AG-AAG-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45949 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCCG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTTAACTCCCCTTAATTTTATG------CA------TTACT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG--GAAGGGAGAG-AATTTC-GG-GAT-AACTGACTACGTCTCTGTCAGTATGTCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45950 : CAGTACATCCAAGAAAATTTTAA------------------T---GGCAGACAGGCCTA-GTGCAAGTAACTTTTAAAAA-G-TACTTGCCC-GACCC---AAAATTTAATTTGCCAT--GAAAAAAAGTTAATATACCCAGCATTTTT-
gi|45951 : CAGTGC-TCCAAGAAAA----AAA------------AA--TG---GG--GACTAGCCCA-GAGCAAGTAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGACCAG-ATTTGT-ATTACC--AAAACACCT------TGCGGTATAATATGAGATATGTAA------------A------CATA----GAC----------TGAAATGTAATAATGT-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAG-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTCTCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCCTTG-TTCTTTATT
gi|45952 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAG------GG---ATTTTTTCAA-----TCTACTTGCCCTGGCTG---AAAAAATAACTTGCCCT--GATCAACAGTTTACATGCCCAG-ATTTTT-ATTACC--AATACACCT------CGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTA-GGTTAGCTCCCCTTAATATTATG------CA------TGTCG--AAA-TCATAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATGTTTG-TTCTTTATT
gi|45953 : CAGTGC-TCCAAGAAAA-----AA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTT---AAAA-ATAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACT--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CGTA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAATTTGATG------CA------TGTCT--AAA-TCACCA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGGGAGAG-AATTTC-AG-AAG-AACTGACAACGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTATTTAATCTTTG-TT
gi|45954 : CAGTGC-TCCAAGAAAA----AAA------------AATTTT---GT--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTT-------------------------GCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTCAT-T-TT-A--TGTAGGGTAAGCTTCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTAATT
gi|45955 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-ACTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTT--------TA----------G-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATGTCTCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45956 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---
gi|45956 : AA-TCTACTTGCCCTGACTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTAAGCTTCCAATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTC-AG-GAG-AACTGACTTTGTCTCTATCAGT-T--------------TGTTGTATTTAATCTTTG-TTCTTTATTtcaatctacttgccctgactgaaaaataacttgccctgatcaacggttcacatgcccagatttttattaccaatacaccttgcggtataatatgaaatatgtaaacatagacttaaatgtattaattttatgtagggtaagcttccaataacattatgcatgtctaaatcacaagttttagagtttgaataagaccgggagaagtgagagaatttcaggagaactgactttgtctctatcagtttgttgtatttaatctttgttctttatt
gi|45957 : cagtgctccaagaaaaaaaaaattttcCAGTGC-TCCAAGAAAA----AGA------------ACATTT---GG--GACTAGCCCATGGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTT-AT-T-AT-A--TGTAGGGTTTGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCAC-----------AGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AA-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45958 : CAGTGC-TCCAAGAAAA----AAA------------AAAATT---TG--GACTAGCCCA-GGGCAAGTAGATTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GAT----------------------TTTT-ATTACC--AATACACTT------TGCGGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATCAAT-T-TT-A--TGTAGGGTAAGCTCCCCATAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---AG-AGAAGCGAGAG-AATTTT-GG-GAG-AACTGAC--TGTCTCTATCAG---------------TATATTGTATTTAATCTTTG-TTCTTTATT
gi|45959 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACTAGCCCA-GGGCAAGTAAGTTGAAAAAA-TCT-TTTGCCCTGGCTG---AAAA--TAACTTGCCCT--GATCAATGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGGGGTATTATATGAAAAATGTAA------------A------CATA----GAC----------TTTAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTTACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGGTTGAA------TAAGACCA---GG-AGAAGTGAGAG-AATTTC-GG-GAG-AACTGACTTTGTCTCTATCA
gi|45960 : CAGTGC-TCCAAAAAAA----AAATACAAAAAATAAAAATTG---GG--GA-------A-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGTGCAG-ATTTTT-ATTACC--AATACACCT------AGTGGTATTATATGAAGTATGTTA------------ACATT--CATA----GAC----------TTAAATGTATTAAT-T-TT-T--TGTAGGGTTATCTCCCCATAACATTATG------CA------TGTCT--TAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTGAGAG-AATTTC-AG-GAATAACTGACTACGTCTCTATCAGTATGCCC-AACTTATGTTGTTGTATTTCATCTCTG-TTCT
gi|45961 : CAGTGA-TCCAAGAAAA----TAA---------------TTT---GG--GATTAGCCCA-GGGCAATTAAGTTGAAAAAAATCTACTTTCCCTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGATTCACTTGCTGAG-ATTTTT-ATTACC--AATACATTTAAATTTTGCGGTATAATATTAATTATGTAATATCTCACATACA------CATA----CACATACATATAATTAAATGTATTAAT-T-TTTA--TGTGGGGTAAGTTCCCTTTAACATAATG------CA------TGTAT--AAA-TCACAA--GTATTAAAGTTTGAA------TAAGATTG---GG-AGAAGTGAGAG-AAATTCAGG-GAG-AAATGACTA-GTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTATTCTTT--TTATTAATT
gi|45962 : CAGTGC-TCCAAGATAA----AAA------------A--TTT---GGC-AACTAGCCCA-GGACAAGCAGGTTGAAAAAA-TCTACTTGCACTGGCTG---AAAA-ATAACTTGCCCT--GATCAAAGGTTCGCTTACCCA
gi|45962 : AAATGTATCAAT-T-TTTA--TGTAGGGTTAAATCCCCTTAACATTATATTTTATTA------TATTTTGAAA-T-AGAA--GTTTTATAATTTATACATACTTAAGACCttaataaaatgtatcaatttttatgtagggttaaatccccttaacattatattttattatattttgaaatagaagttttataatttatacatacttaagacc
gi|45963 : cagtgctccaagataaaaaatttggcaactagcccaggacaagcaggttgaaaaaatctacttgcactggctgaaaaataacttgccctgatcaaaggttcgcttacccattaataCAGGGC-TACAATATAA----AAA------------AAATAG---GG--GAC------A-GGAC---CAAGTTGAAAAAA-TCTACTTTCCCTGGCTGAAAAAAA-ATGACATGCCCTCAGATTAAAGGTTCACTTGCCTAG-ATTATT-AATACC--AATATAGCT------
gi|45964 : CAGTGC-TCCAAGAAAA----AAA------------AAAT-----GG--GACTAGCCCA-GGGCAAGTAGGTTGAAAAAA-T
gi|45965 : CAGTGC-TCCAAGAAAA----AAA------------AAATTT---GG--GACT
gi|45966 : C-CCCGGGGAAA----AAA------------AAATTT---GG--GACTAACCCA-GGGCAAGTAGGTTGAAAAAA-TCTACTTGCCCTGTCTG---AAAA-ATAACTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTTT-ATTACC--AATACACCT------TGCGGTATAATATGAAATTTTTTA------------A------CATA-----------------------GTGTTAAT-T-CT-A--TGTAGGGTTAGCTCCCCTTAATATTATG------CA------TGTCT--AAA-TGACAA--GTTTTAGAGTTTGAA------TAAGACTG---GG-AGAAGTCAGAG-AATTTC-AG-GAG-AACTGACTACATCTCTATCAGTATGCCC-AACTTATTATATTGTATTTAATCTTTG-TTCTTTATT
gi|45967 : AA------------AAATTTAATGGCAGACAGGCCCA-GGGCAAGTAACTTTTGAAAA-TGTACTTGCCTTGACCA---AAAT-TTTACTTGCCCT--GA-AAAAAGTTAACATGCCCAATATTTTTCATT-CCTGAATACA-------------GTACAATTTGA
gi|45968 : AAAAA-TCTACATGCCCTGGCTG---AA----TAACTTGCCCT--GATCAACGGTTCACACGCCCAG-ACTTTT-ATTACC--AATACGCCT------TGCTGTATAATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGCATTCAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTTTG------CATGCGACTGTCT--AAA-TCACAA--GTTTTAAAGTTTAAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTACGTGTTTATCAGTATG-CCAAACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45969 : GCTG---AAAA-ATAGCTTGCCCT--GATCAACGGTTCACATGCCCAG-ATTTGT-ATTACC--AATACACTT------TGCGG---AATATGAAATATGTAA------------C------TATA----GAA----------CTGACTGT
gi|45970 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGCGGTATACTATAAAATAATTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAATTTGAA------CAAAACCG---GG-AGAAGTGAAAG-AATTTCAGG-GAG-AACTGAC--TGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45971 : TAACTTGCTCT--GATAAAAAATTCACTTGCCCAG-ATTTTT-ATTACC--AATAAACTT------TGTGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAAATGTATTAAT-T-TTTA--CATAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCGCAA--GTTTGAGAGTGTGAA------TAAAACCG---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-GACTTATTATGTTGTATTTTGTCTTTGTTTCTTTATT
gi|45972 : TAACTT-CCCT--AATCAAAGGTTCACTTGCCCAA-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATATTTAA------------A------CATAAATAGAC----------TTAATTGTATTAAC-TGTC-A--TGTAGGTTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTAAGTGTTTGGA------AAAGATCA---GG-AGAAGTGAGAG-AATTTCAGG-GAG-AACTGACTATGTCTCTATAAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTCATT
gi|45973 : TAACTTGCCCT--GATCAAAGAT-CACTTGCCAAG-ATTTTT-ATTACC--AATACACTT------TGCAGTAAAATATAAAATAATTAA------------A------CATAAATAGAC----------CTAAATGTATTAATAT-TT-A--TGTAAGGTTAGCTCCCTATAACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAG------CAAGACCA---GG-AGAAGTGAGAG-AATTTC-AGTGAG-AACTGACTTTGTCTCTATAAGTATGACC-AACTTATTAAGCTGTATTTTGTCTTTG-TTCTTTATT
gi|45974 : TAACTTGCCCT--GATCAAAGATTCACTTGCCCAG-ATTTTT-ATTACC--AATACACTT------TGCGGTATAATATAAAATAATTAA------------A------TATAAATAGAT----------TTAAATGCATTAAT-T-TTTA--TGTAAGGTTAGCTCCCCATAACATTATG------CA------TGTGT--AAA-TCACAA--GATTTAGAGTTTGAA------TAAGACCG---GA-AGAAGTGAGAGAAATCTCTGG-GAG-AACTGACTATGTCTCTATAAGAATG-
gi|45975 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAT-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATCTAATCTTTG-TTCTTTATT
gi|45976 : T--GATCAGCGGTTCACATGCCCAG-ATTTTT-ATTACC--AAAACTCCT------TGCGGTATAATATGAAATTTGTTA------------A------CATA----GAC----------TTAAATGTGTTAAT-T-AT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTGC-AG-GAG-AACTGACTATGTATCTATCAGTATGCCC-AACTTATTATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45977 : AATATGAAATATGTAA------------A------CATA----GAC----------TTAAATGTATTAAT-T-TT-A--TGTAGGGTTAGCTCCCCTTAACATTATG------CA------TGTCT--CAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCG---GG-AGAAGTGAGAG-AATTTA-GG-GAG-AACTGACTATG--TCTGTCAGTATGTCC-AACTTATTATGTTGTTTTTAATCTTTG-TTCTTTATT
gi|45978 : AAA-T-TT-A--TGTAGGGTAAGCTCCCCATAACAATATG------CA------TGTCT--AAA-TCACAA--GTTTTAGAGTTTGAA------TAAGACCA---GG-AGAAGTGAGAG-CAGTTC-GG-GAG-AACTGACTATGTCTCTATCAG---------------TATGTTGTATTTAATCTTTG-TTCTTTATT
gi|45979 : T-T-TT-AA-CATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--GTTTTAGAGTTTGAA------TCAGATAG---GT-AGAA-TGAGAGAAATTGA-GG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-ATCTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45980 : T-T-TT-AA-TGTACAGTTATCTCCTCTTTACATTATA------CA------TGTGT--AAA-TCACAAAAGTATTAGAGTTTAAA------TAAGATAGTGAGGTAGAAGTAAGAT-AAATTCAGG-GAG-AAATGAATATTTCTCTATCAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTAATT
gi|45981 : T-T-TT-AAATGTAGGGTTATCTCCTCTTTACATTATG------CA------TGTGT--AAAATCACAA--GTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAGAAATTTT-GG-GAG-AAGTGAATATTTCTCTATTAGTATGACC-AACTTATTATGTTGTATTTAGTCTTTG-TTCTTTATT
gi|45982 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--TTATTAGAGTTTGAA------TAAGATAG---GT-AGAAGTGAGAA-AAATTCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTT-TTCTTTATT
gi|45983 : T-T-TT-AA-TATAGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TAACAA--GAATTAGAGTTTGAA------TAAGATAA---GT-AGAAGTGAGAG-AATATCAGG-GAG-AAGTGAATAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTCTTTATT
gi|45984 : T-T-TT-AA-TGTCGGGTTATCTCCCCTTTACATTATG------CA------TGTGT--AAA-TCACAA--ATATTAGAGTTTGAA------TAAGATAG---GT-AGAAATGAGAA-AATTTCAGG-GAG-AAGTGAACAT-TCTCTATCAGTATGACC-AACTTATTATGTTGTGTTTAGTCTTTG-TTATTTATT