lowQualScore : 111 111111 33333 11111 1111 1 1
lowQualScore : 1 33 11 555 0 1 0 11 777777 6 77 4444 2 0 22 5 0 0 11111 1 22 222 1 66666 22222 666666666 22222 1 666666 1 444444444 2 1111 3 1 9 2 5 5 8 99
lowQualScore : . .. .. ... . . . .. ...... . .. .... . . .. . . . ..... . .. ... . ..... ..... ......... ..... . ...... . ......... . .... . . . . . . . ..
lowQualScore : 4 77 88 333 8 4 8 88 666666 5 22 5555 5 6 88 6 1 5 77777 0 44 222 0 66666 55555 222222222 55555 0 888888 0 111111111 1 2222 2 1 4 7 2 0 1 55
consensus : ATTTTCCCA-TAGTATTCC--TA--T--GTAAAACTCAAA--G-N----CCCCT--T----ACAGGGCCCCTAT--ANATCCCAGC--G-CC-C--TTG--ATT-TG-T--AC-----AAA---C-TTA-AA-----ACT-CT-TAN-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAG-AAGAAGA-TTTTTGAAAATNTTCA-ATTT
Reference ( gi|30975 ) : ATTTTCCCA-TAGTATTCC--TA--T--TTAAAACTCAAA--G-A----CCTCT--T----ACAGGGCCTCTAT--ACATCCCAGT--GTCC-C--TTG--ATT-TT-T--AC-----AAA---C-TTA-AA-----ACT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAG-AATAAGA-TTTATGACAATGTTCA-ATTT
gi|30976 : ATTTTCCCA-TAGTATTCC--TA--T--GTAAAACTCAA---G-A----CCTCT--T----ACAGGGCCTCTAT--ACATCCCAGT--G-CC-C--TTG--ATT-TT-T--AC-----AAA---C-TTA-AA-----ACT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAG-ATTAAGA-TTTATGACAATGTTCA-ATTT
gi|30970 : ATTTTCCCA-CAGTATTCC--TA--T--GTAAAACTCAAA--A-A----CC-CT--T----ACAGGGCCTCTAT--ACATCCCAGT--GTCC-C--TTG--ATT-TG-T--AC-----AAA---C-TTA-GA-----TTT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-AGAC-TA-GTTGTTGAA-AGTAAGA-TTTTTGACAATGTTCA-ATTTt
gi|30979 : aaaaaaattcATTTTCCCA-TAGTATTCC--TA--T--GTAAAACTCAAA--G-T----CCCTT--T----ACAGGGCCTCTAT--ACATCCCAGT--GCCC-C--TTG--ATT-TTTT--AC-----AAA---C-TTA-AC-----ACT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CT-GTTGCTGAG-AATAAGA-TTTATGAAAATt
gi|30980 : ATTTTCCCA-TAGTATTCC--TA--T--GTAAAACTCAAA--G-T----CCCCT--T----ACAAGGCCTCTAT--ATATCCCAGT--GCCC-C--ATG--ATT-TG-T--AC-----AAA---C-TCA-GA-----ACT-CA-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-GA-GCTGCTGAG-AATAAGA-TTTATGAAAATGTTCC-ATTTt
gi|30981 : ATTTTCCCA-TAGTATTCC--TA--T--GTAAAACTATAA--G-T----TCCCT--T----ACAGGGCCTCTTT--ACATCCCAGT--GCCC-C--ATG--ATT-CC-T--AC-----AGA---C-TTA-GATTAGAACT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAT-TGAC-CA-GTAGTTGAG-AACAAAA-TTT-TGAAAATGTTCA-ATTTt
gi|30964 : ATTTTCCTA-TAGTATTCC--TA--A--GTAAAACTCAAA--G-T----TCCCT--T----ACAGGGCTTCTAT--ACACCCCAGT--GCCC-A--TTG--ATT-GG-T--TC-----AAA---C-TTA-GA-----ACT-TT-TAA-TCATAGGCATATTT-TATATCAAATATAA---------ACACATTTGAC-TGAC-AA-GGTGTTGAG-AATAAGA-TTTTTGAAAATGTTCA-ATTt
gi|30978 : atatatacttaaatgaaaataaaaaaatgagagttttccATTTTCCCA-TAATATTCC--TA--T--GTTAAACTCAAA--G-A----CC-CT--T----ACAGGGCCTCTAT--ACATCCCATT--GTCC-C--TTG--ATA-TG-T--AC-----AAA---A-TTA-GA-----ACT-CT-TAA-TCATAGGGATAATT-TATATCAAATAGGA---------AAAAATTTGAC-CAAC-AG-GTTGTTGAct
gi|30982 : ATTTTCTCA-TAGTATTCC--TA--T--GTAAAACTCAAAAAG-A----CC-CT--T----ACAGGGCCTCTAT--GCATCCCAGT--GTCC-C--TTG--ATT-TG-T--AC-----AAA---C-TTA-GA-----TTT-CT-TAA-TCATAGGGATAATT-TATATAAAATATGA---------ACAAATT-----TGAC-CT-GTTTTTGA
gi|30977 : ATTTTCCAA-TAGTATTCC--TA--T--ATAAAAC-CAAA--G-T----CCTCT--T----ACAGGGCC-CTAT--AAATACAAGA----CC-A--TTG--ATT-GG-T--AC-----AAA---C-CTT-AA-----ACC-CA-TAC-TCATTGGGAAAATC-CATATCAAATATGA---------ATAAATTTGAC-TGAC-CA-GTTGTTGAG-AAAAAGA-TTTTTGAAAATGTTCT-ATTT
gi|30967 : ATTTACCCA-TAGCGTTCT--TA--T--GTTAAACTTTAA--G-T----GTCCT--T----GCAGGGTCCCTAT--AAATACTAGC----CC-C--TTG--ATT-TG-T--AC-----AAA---C-TTC-AA-----ACT-CC-TAC-TCATAAGGATAACT-TATAGCAAATATGA---------ACAAATGTAAG-TGTC-CG-GTTGTTGAG-AAGAAGA-TTTTTGAAAATGTTCA-ATTTt
gi|30983 : aaagaagacagATTTCCCCA-TAGTATTCC--TA--C--ATATAACTCAAT--G-A----CC-CT--T----ACAGGGCCCCTAT--AAATACAAGC----CC-C--TTG--ATT-TA-T--AC-----AAA---C-TT----------------TAA-T---AGGGATAATC-TATATGAAATATAATCTGTATAAACACATTTGAC-TGAC-CT-GTTGTTGAG-AAGAAGA-ATTTTGAAAATATTCT-ATTT
gi|30961 : ATTTACCTA-TAGCATTCTCATA--T--TTACTA-TAGAA--GTA----TTTTTAAT----ACAAGGCCTCAGT--AGATCCCAGT----CC-A--TTT--ATT-AG-A--AT-----AAA---G---A-AA-----ACT-CT---A-TCATAGGGATATTT-TATAGGAAATATGA---------AAACATTTGAC-CAAC----ATTCTTGAG-TTGAAGC-TTTTTGAAAA--CTCACATTTt
gi|30960 : acatatcacttgcagaagattttaaaaaaacgctatATTTACCTA-TAGCATTCT--CA--TACTTA---CT-ATA--G-AAGTGTTTTTAAT----ACAAGGCCTCGGT--AGACCTCAGT----CC-A--TTT--ATT-AG-A--AT-----AAA---A---A-AA-----ACT-CT---A-TCATAGGGATAATC-TATAGGAAATATGA---------AAACATTTGAC----C-TGCGTTCTTGAG-TTGAAGC-TTTTTGAAAA--TTCACATTTt
gi|30962 : acatatcacttgaagaagatttaaaaaaagctatATTTACCTA-TAGCATTCT--CA--T--ATA---CT-ATA--G-AAGTGTTTTTAAT----ACAAGGCCTCAGT--AGATCCCA----GTCC-A--TTA--A-T-AG-A--AT-----AAA------GA-AA-----ACT-CT---A-TCATAGGGATATTC-TGTAGGAAATATGA---------AAACATTTGAC-CTAC----GTTCTTGAG-t
gi|30963 : acatatcacttgcagaagatttaaaaaagctatATTTACTTA-TAGCATTCTCATA--T--TTACTA-TAGAA--G-T----GTTTTAAT----ACAAGGCCTCGGT--TGACCCCAGT----CC-A--TTT--ATT-AG-A--AT-----AAA-------A-AA-----AAT-GT-CTA-TCATAGGGATATTC-TAAAGAAAATATGA---------AAACATTTGAC-CAAC----GTTCTTGAG-ttgaagcttttttcatttttt
gi|30959 : acatatcatttgcagaagatttaaaaaaatctatATTTATCTA-TAGCATTCT--CA--T--ATACTA-TAAAA--G-T----GTTTT--TTAATACAAGGTCTCGGT--AGACCCCAGA----CC-A--TTT--ATT-AG-A--AT-----AAA---G---A-AA-----ACT-CT---A-TCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAG-TTGAAGG-TTTTTG--AAGATTCATATTTctttttgaaaattcacatttt
gi|30957 : acatatcacttgcagaagatttaaaaaatttatATTTATCTA-TAGCATTCT--CA--T--ATACTA-TAAAA--G-T----GTTTT--TTAATACAAGGTCTCGGT--AGACCCCAGA----CC-A--TTT--ATT-AG-A--AT-----AAA---G---A-AA-----ACT-CT---A-TCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAG-TTGAAGG-TTTTTG--AAGATTCATATTTt
gi|30958 : acatatcacttgcagaagatttaaaaaagctatATTTACCTA-TAGCATTCT--CA--T--ATA---CT-ATA--G-AAGTGTTTTTAAT----ACAAGGCCTCGGT--AGACCCCAGA----CC-A--TTT--ATT-AG-A--AT-----AAA---C---A-AA-----ACT-CT---A-TCATAGGGTT--TTCTATAGGAAATAGGA---------AAACATTTGAC-t
gi|30965 : acatatcacttgcagaagatttaaaaaagctatTTTTTCCA-TAGTATTCC--TA--T--GTAAAACTCAAA--G-A----CCTCT--T----ACAGGGCCTCTAT--ACAACCCAGT--GTCC-T--TTG--ATT-TG-T--AC-----AAA---C-TTA-AA-----ACT-CT-TAA-TCATAGGGATAATT-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGActacattcatgagttgaagctttttgaagattcacatttt
gi|30969 : atttgaaaaatgagaattttccTTTTTCAA-TAGTATTCC--TA--T--ATAAAACTCAAA--A-A----CCCTT--A----ACAGGGCCCCTAT--ACATACAAGA----CC-C--TTG--ATT-TG-T--AT-----AAA---C-TTT-AA-----ACC-CA-TAC-TTATTTGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAG-AAGAAGA-TTTTTGAAAATTTTCT-ATTT
gi|30968 : aaaaaagagaatTTTTCCAA-TAGTATTCC--TA--T--ATAAAACTCA----G-T----CCCCT--T----ACAGGGCC-CTAT--AAATTCAAGA----CC-C--TTG--ATT-TG-T--AC-----AAA---C-TTT-AA-----ACC-CA-TAC-TCATTGGGATAATC-CATATCAAATATGA---------ACAAATTTGAC-TGAC-CA-GTTGTTGAG-AAGAAGA-TTTTTGAAAATTTTCT-ATTTt
gi|30984 : aaaaaagagaattttctgTTTTCCAA-TAGTATTCC--TA--T--ATAAAACTCAAA--A-C----TCCCT--A----ACAGAGCCCCTAT--AAATACAAAA----CC-A--TTG--ATT-TG-T--AT-----AAA---A-TTT-AA-----ACC-CA-TAC-TCATTGGGATAATC-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAG-AAGAAGA-TTTTTGAAAATt
gi|30973 : TTTTCCCA-TAGTATTCT--TA--T--GTAAAACTCAAA--G-T----CCCCT--T----ACAGTGCCCCTAT--AAATACAAG------C-CAACTG--GTT-TG-T--AC-----AAA---C-TTC-AA-----ACT-C--------ATAGAGATAATC-TATATGAAATATGA---------ACAAATTTGAC-CGAC-TG-GTTGTTGAG----AAGATTTTTTTAAAATTTTCT-ATTT
gi|30974 : tgTTTTCCCA-TAGTATTCC--CA--T--GTAAAATTCTAA--G-T----CCCCT--T----ACAGGGCCCCTAT--AAATCCTA----GCCC-C--TTATTATTATC-T--GC-----AA-------TC-AA-----ACC-CC-TAC-ACATAGGGATAATT-TATGCCAAATATGA---------ACAAATCTGACATG-C-C--GTTCTTAAG-t
gi|30971 : tgTTTTTCTA-TAGTAATCC--TA--T--GTAAAAATCAAA--G-T----CCTAT--T----ACTGGACCATGAT--AGATCCTAGC----CC-C--TTC--ATT-TG-A--AT-----AAA---C-ATG-AA-----ACT-CC-TAT-ACATAAGGATCATT-TATACAAAATATGA---------ACACATTTGGCTTGACAC---TTCTTAAG-AGGAAGA-TCT
gi|30972 : tgTTTTCCAA-TAGTATTCC--TA--T--ATAAAA-TCAAA--G-T----CAGTT--T----ATGGGACCCCAGT--ATACC---GT--AACC-CA-TTT--ATT-TG-A--AC-----AAC---T-TTG-AA-----ACC-TC-TAT-TCATAGGGttttaa
gi|30985 : tgTTTCCCAATAGTATTCC--TA--T--ATAAATCTCAAA--G-C----CCCCT--T----ACAGGGAC-CTAT--AAATACAAGA----CC-T--TTG--ATT-TG-T--AC-----AAA---C-TTT-AA-----ACC-CA-TAC-TCATTGGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAG-AAGAAGA-TTTTTGAACATTTTTT-ATTT
gi|30966 : TTCACA-TAGTATTCC--TA--T--GTAAAAACTAAA--GTA----CC-CT--T----ACTGGGCCCTAATGAACA--CTAGC---TCC-T--TT---ATT-TG-A--AC-----TAA---C-TTG-AA-----ACTGCTACAA---ATAGGGACCATT-TATACCAAATAAGA---------ACAAATTTGGC-TGAT-TT-GTTCTTGAG-AAAAAGC-TTTt
gi|30986 : tttgagaattatctgtgAGTATTCC--TA--T--ATAAAACTCAAA--G-T----CTCCT--T----ACAGGGCCCCTAT--ACAGACAAAC----CC-C--TTG--ATT-TG-T--AC-----AAA-----TTATAA-----ACC-CA-TTC-TCATTGGGATATTC-TATATCAAATATGA---------ACAAATTTGTC-TGAC-CA-GTTGTTGAG-AAGAAGA-TTTTTGAAAATTTTAT-ATTTttagaaatttacatttt
gi|30987 : AGTGTTCC--CAAAT--ATACAAATTAAA--G-T----CTCTT--T----AC-GGGCACCTGT--AAACCCTAGCCGGTTTAC--TTG--A---------AC-----AAA---AGTTA-AA-----CCT-CT--AT-TCATAGGGATCATT-TAAACCAAATATGA---------ACATATTTGAC-TTAT-CA-AATTTTGAG-At
gi|30991 : --T----ACAGGGTCTCTAT--ACATCCCAGT--GCCC-C--TTG--ATT-TG-T--AC-----AAA---C-TTA-GA-----ACT-CT-TAA-TCATAGGGATAATT-CATATCAAATATGA---------ACAAATTTGAC-TGAC-TG-GTTGTTGAG---TAAGA-TTTATGAtg
gi|30995 : --T----ACAGGATCTCTAT--ACATCCCAGT--GCCC-C--TTG--ATT-TG-T--AC-----AAA---C-TTC-AA-----ACT-CT-TAG-TCATAGAGATAATC-TTTATCAAATATGA---------AAAAATTTGAC-TGAC-AA-GTTGTTGAG-
gi|30994 : --T----ACAGGGCCACTGT--AAACACTAGC----CC-C--TTG--ATT-TG-A--AC-----AAA---C-TTC-AA-----A-T-CC-CAACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAA-AAAAATA-TCT-TGA-AAT-TTCA-ATTT
gi|30993 : --T----ACAGGGCCACTGT--AAACACTAGC----CC-C--TTG--ATT-TG-A--AC-----AAA---C-TTC-AA-----A-T-CC-CAACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAA-AAAAATA-TCT-TGA-AAT-TTCA-ATTTt
gi|30990 : --T----ACTGGGCCCCAATGAACA--CCGAC--ATC-----TTT--ATT-TG-A--AC-----AAA---C-TGG-AA-----ACC-CC-TAC-TCATAGGGACCATT-TATACCAAATATGA---------ACAAATTTGGC-CGAC-TT-GTTCTTGAG-AAAAATA-TTTt
gi|30992 : --T----ACTGGACCCCAAT--AGATC--ATG--GCCC-C--TTC--ATT-TG-A--AA-----AAA---C-ACG-AA-----ACC-CTGTTC-TCATAGGGATCATT-CATACCAAATATGA---------ACGAATTTGGC-TGGA-CA-GTTCTTAAG-AAGAAGA-TTTGTttagaaattcataatttt
gi|30989 : --T----ACTGGACCCCAAT--AGACCCTAG-----CC-C--CTG---TG-TT-TGAAC-----AAA---C-AAG-AA-----AGC-CC-TAC-TCATAGTGATCATT-TATATCAAATATGA---------TAGAATTTGGC-TGGA-CA-GTTCTTGAG-AAGAAGATTTTTTGAAAATTCACA-ATTTttaaaattca
gi|30988 : --T----ACTGGACCCCGAT--AGAACCTAG-----CC-C--TT--------T-T--ACTGAATAAA---C-TTG-AA-----ACC-CC-TAT-CCATAGAGATCATT-TACACCAATTATAA---------ACAAATTTGGT-TTGT-CG-GTC-TTGAG-ATGAAGA-TTTTTGAAAATTCACA-ATTT
gi|30996 : GGCCCCAAT--AAACACTAGT----CC-C--TTT--ACT-TG-A--AA-----AAAAAAC---A-AA-----AAA-CC-TAT-TCATAGGGATCATT-AAAACCAAATAGGA---------ACACATTTGGC-TCAA-CA-GTTTTTGAG-AAGAACA-TTTt
gi|30997 : --GTCC-C--TTT--ATT-TG-A--AA-----AAAA--C-TTG-AA-----ACC-CC-TAT-TTATATAGATCATT-TATAACAAATATTC---------ACAAAATTGAT-TCAT-CA-CTTCTTGAGTAATTA-C-TTTTTGAAAA--TTCATATTTtttagatgatt
Alignments
lowQualScore : 222 1111 1
lowQualScore : 1 11 11 0 3 333333 11 22 4444 777 0 1 888 3 2 3333 1 44 555555555 22222 444 2 1 444444444 2 1111 3 1 1 88 0
lowQualScore : . .. .. . . ...... .. .. .... ... . . ... . . .... . .. ......... ..... ... . . ......... . .... . . . .. .
lowQualScore : 4 88 88 3 0 888888 88 66 4444 222 8 0 000 9 9 5555 0 00 222222222 44444 222 3 0 000000000 0 5555 1 2 2 77 4
consensus : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCTT----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCA-ATTT
Reference ( family-528 ) : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GNCCCCTT----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGT-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATNTTCA-ATTT
gi|30957 : ATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTTTTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGA--TTCATATTT
gi|30958 : acatatcacttgcagaagatttaaaaaagctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTTT----AATACAAGGCCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---C---A-AA-----ACTCT---ATCATAGGGTT--TTCTATAGGAAATAGGA---------AAACATTTGAC-CTAC----ATTCATGAGTTGAAGC-TTT-TTGAAGA--TTCACATTTt
gi|30959 : acatatcacttgcagaagatttaaaaaagctatATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTTTTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGA--TTCATATTTt
gi|30960 : acatatcacttgcagaagatttaaaaaatttatATTTACCTA-TAGCATTCT--CA--T-----ACTTACTATAGAA--GTGTTTTT----AATACAAGGCCTCGGTAGACCTCAGT--CCA-T-T-T--ATT-AGA-ATAAA---A---A-AA-----ACTCT---ATCATAGGGATAATC-TATAGGAAATATGA---------AAACATTTGAC----C-TGCGTTCTTGAGTTGAAGC-TTT-TTGAAAA--TTCACATTTt
gi|30961 : acatatcacttgaagaagatttaaaaaaagctatATTTACCTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTATTTTT----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTT-TATAGGAAATATGA---------AAACATTTGAC-CAAC----ATTCTTGAGTTGAAGC-TTT-TTGAAAA--CTCACATTTt
gi|30962 : acatatcacttgcagaagattttaaaaaaacgctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTTT----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-A--ATA--GA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TGTAGGAAATATGA---------AAACATTTGAC-CTAC----GTTCTTGAGTTGAAGC-TTT-TTt
gi|30963 : acatatcacttgcagaagatttaaaaaagctatT----A---CAAGGCCTCGGTTGACCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA-------A-AA-----AATGT-CTATCATAGGGATATTC-TAAAGAAAATATGA---------AAACATTTGAC-CAAC----GTTCTTG------AGC-TTT-TTGAAAA--TTCACATTTtcatttttt
gi|30964 : acatatcatttgcagaagatttaaaaaaatctatatttacttatagcattctcatatttactatagaagtgttttaaATTTTCCTA-TAGTATTCC--TA--AGTAAAACTCA------AA--GTTCCCTT----A---CAGGGCTTCTATACACCCCAGTG-CCCAT-T-G--ATT-GGT-TCAAA---C-TTA-GA-----ACTTT-TAATCATAGGCATATTT-TATATCAAATATAA---------ACACATTTGAC-TGAC-AA-GGTGTTGAGAATAAGA-TTT-TTGAAAATGTTCA-ATTt
gi|30965 : atatatacttaaatgaaaataaaaaaatgagagttttccTTTTTCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GACCTCTT----A---CAGGGCCTCTATACAACCCAGTG-TCC-T-TTG--ATT-TGT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAct
gi|30966 : atttgaaaaatgagaattttccTTCACA-TAGTATTCC--TA--TGTAAAAACTA------AA--GTACCCTT----A---CTGGGCCCTAATGAACACTAGCT-CCT-T-T----ATT-TGA-ACTAA---C-TTG-AA-----ACTGC-TACAAATAGGGACCATT-TATACCAAATAAGA---------ACAAATTTGGC-TGAT-TT-GTTCTTGAGAAAAAGC-TTT-TTAGAAATTTACA-TTTT
gi|30967 : tttgagaattatctgtgATTTACCCA-TAGCGTTCT--TA--TGTTAAACTTT------AA--GTGTCCTT----G---CAGGGTCCCTATAAATACTAGC--CCC-T-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCC-TACTCATAAGGATAACT-TATAGCAAATATGA---------ACAAATGTAAG-TGTC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATGTTCA-ATTT
gi|30968 : aaagaagacagTTTTCCAA-TAGTATTCC--TA--TATAAAACTCA----------GTCCCCTT----A---CAGGGCCC-TATAAATTCAAG-A-CCC-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-CATATCAAATATGA---------ACAAATTTGAC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCT-ATTT
gi|30969 : aaaaaagagaattttctgTTTTTCAA-TAGTATTCC--TA--TATAAAACTCA------AA--AACCCTTA----A---CAGGGCCCCTATACATACAAG-A-CCC-T-T-G--ATT-TGT-ATAAA---C-TTT-AA-----ACCCA-TACTTATTTGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCT-ATTTt
gi|30970 : aaaaaagagaatATTTTCCCA-CAGTATTCC--TA--TGTAAAACTCA------AA--AA-CCCTT----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-AGAC-TA-GTTGTTGAAAGTAAGA-TTT-TTGACAATGTTCA-ATTTt
gi|30971 : aaaaaaattcTTTTTCTA-TAGTAATCC--TA--TGTAAAAATCA------AA--GTCCTATT----A---CTGGACCATGATAGATCCTAGC--CCC-T-T-C--ATT-TGA-ATAAA---C-ATG-AA-----ACTCC-TATACATAAGGATCATT-TATACAAAATATGA---------ACACATTTGGCTTGACAC---TTCTTAAGAGGAAGA-TCT-TTt
gi|30972 : tgTTTTCCAA-TAGTATTCC--TA--TATAAAA-TCA------AA--GTCAGTTT----A---TGGGACCCCAGTATACCGTAAC--CCA-T-T-T--ATT-TGA-ACAAC---T-TTG-AA-----ACCTC-TATTCATAGGGttaa
gi|30973 : tgTTTTCCCA-TAGTATTCT--TA--TGTAAAACTCA------AA--GTCCCCTT----A---CAGTGCCCCTATAAATACAAGC--CAA-C-T-G--GTT-TGT-ACAAA---C-TTC-AA-----ACTC-------ATAGAGATAATC-TATATGAAATATGA---------ACAAATTTGAC-CGAC-TG-GTTGTTGAGAAGA--T-TTT-TTTAAAATTTTCT-ATTT
gi|30974 : tgTTTTCCCA-TAGTATTCC--CA--TGTAAAATTCT------AA--GTCCCCTT----A---CAGGGCCCCTATAAATCCTAGC--CCC-T-T-ATTATTATCT-GCAA-------TC-AA-----ACCCC-TACACATAGGGATAATT-TATGCCAAATATGA---------ACAAATCTGACATG-C-C--GTTCTTAAGt
gi|30975 : tgATTTTCCCA-TAGTATTCC--TA--TTTAAAACTCA------AA--GACCTCTT----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAATAAGA-TTT-ATGACAATGTTCA-ATTT
gi|30976 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------A---GACCTCTT----A---CAGGGCCTCTATACATCCCAGTG-CCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGATTAAGA-TTT-ATGACAATGTTCA-ATTT
gi|30977 : ATTTTCCAA-TAGTATTCC--TA--TATAAAAC-CA------AA--GTCCTCTT----A---CAGGGCCC-TATAAATACAAG-A-CCA-T-T-G--ATT-GGT-ACAAA---C-CTT-AA-----ACCCA-TACTCATTGGGAAAATC-CATATCAAATATGA---------ATAAATTTGAC-TGAC-CA-GTTGTTGAGAAAAAGA-TTT-TTGAAAATGTTCT-ATTTt
gi|30978 : ATTTTCCCA-TAATATTCC--TA--TGTTAAACTCA------AA--GA-CCCTT----A---CAGGGCCTCTATACATCCCATTGTCCC-T-T-G--ATA-TGT-ACAAA---A-TTA-GA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATAGGA---------AAAAATTTGAC-CAAC-AG-GTTGTTGAt
gi|30979 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCTTT----A---CAGGGCCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TTTTACAAA---C-TTA-AC-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CT-GTTGCTGAGAATAAGA-TTT-ATGAAAAT
gi|30980 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCTT----A---CAAGGCCTCTATATATCCCAGTG-CCC-CAT-G--ATT-TGT-ACAAA---C-TCA-GA-----ACTCA-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-GA-GCTGCTGAGAATAAGA-TTT-ATGAAAATGTTCC-ATTTt
gi|30981 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTAT------AA--GTTCCCTT----A---CAGGGCCTCTTTACATCCCAGTG-CCC-CAT-G--ATT-CCT-ACAGA---C-TTA-GATTAGAACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAT-TGAC-CA-GTAGTTGAGAACAAAA--TT-TTGAAAATGTTCA-ATTTt
gi|30982 : ATTTTCTCA-TAGTATTCC--TA--TGTAAAACTCA------AAAAGACCC-TT----A---CAGGGCCTCTATGCATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATAAAATATGA---------ACAAATT-----TGAC-CT-GTTTTTGAt
gi|30983 : ATTTCCCCA-TAGTATTCC--TA--CATATAACTCA------AT--GACCC-TT----A---CAGGGCCCCTATAAATACAAGC--CCC-T-T-G--ATT-TAT-ACAAA---C-TT---------------TA---ATAGGGATAATC-TATATGAAATATAATCTGTATAAACACATTTGAC-TGAC-CT-GTTGTTGAGAAGAAGA-ATT-TTGAAAATATTCT-ATTT
gi|30984 : TTTTCCAA-TAGTATTCC--TA--TATAAAACTCA------AA--ACTCCCTA----A---CAGAGCCCCTATAAATACAAA-A-CCA-T-T-G--ATT-TGT-ATAAA---A-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATt
gi|30985 : TTTCCCAATAGTATTCC--TA--TATAAATCTCA------AA--GCCCCCTT----A---CAGGGACC-TATAAATACAAG-A-CCT-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGAAGAAGA-TTT-TTGAACATTTTTT-ATTT
gi|30986 : AGTATTCC--TA--TATAAAACTCA------AA--GTCTCCTT----A---CAGGGCCCCTATACAGACAAAC--CCC-T-T-G--ATT-TGT-ACAAA-----TTATAA-----ACCCA-TTCTCATTGGGATATTC-TATATCAAATATGA---------ACAAATTTGTC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTAT-ATTTt
gi|30987 : AGTGTTCC--CAAATATACAAATTA------AA--GTCTCTTT----A---C-GGGCACCTGTAAACCCTAGC--CGG-T-T-T--ACT-TGA-ACAAA---AGTTA-AA-----CCTCT--ATTCATAGGGATCATT-TAAACCAAATATGA---------ACATATTTGAC-TTAT-CA-AATTTTGAGAt
gi|30988 : T----A---CTGGACCCCGATAGAACCTAGC--CCT-T-T-T--ACT--GA-ATAAA---C-TTG-AA-----ACCCC-TATCCATAGAGATCATT-TACACCAATTATAA---------ACAAATTTGGT-TTGT-CG-GTC-TTGAGATGAAGA-TTT-TTGAAAATTCACA-ATTTtg
gi|30989 : T----A---CTGGACCCCAATAGACCCTAGC--CCC-TGT-G---TT-TGA-ACAAA---C-AAG-AA-----AGCCC-TACTCATAGTGATCATT-TATATCAAATATGA---------TAGAATTTGGC-TGGA-CA-GTTCTTGAGAAGAAGATTTT-TTGAAAATTCACA-ATTTt
gi|30990 : T----A---CTGGGCCCCAATGAACACCGACA-TCT-T-T----ATT-TGA-ACAAA---C-TGG-AA-----ACCCC-TACTCATAGGGACCATT-TATACCAAATATGA---------ACAAATTTGGC-CGAC-TT-GTTCTTGAGAAAAATA-TTT-TTAGAAATTCATA-ATTT
gi|30991 : T----A---CAGGGTCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTA-GA-----ACTCT-TAATCATAGGGATAATT-CATATCAAATATGA---------ACAAATTTGAC-TGAC-TG-GTTGTTGAG--TAAGA-TTT-ATGAt
gi|30992 : T----A---CTGGACCCCAATAGATCATGGC--CCC-T-T-C--ATT-TGA-AAAAA---C-ACG-AA-----ACCCTGTTCTCATAGGGATCATT-CATACCAAATATGA---------ACGAATTTGGC-TGGA-CA-GTTCTTAAGAAGAAGA-TTTGTTTAAAAT
gi|30993 : T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCA-ATTTtca
gi|30994 : T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCA-ATTTt
gi|30995 : T----A---CAGGATCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCT-TAGTCATAGAGATAATC-TTTATCAAATATGA---------AAAAATTTGAC-TGAC-AA-GTTGTTGAGt
gi|30996 : GGCCCCAATAAACACTAGT--CCC-T-T-T--ACT-TGA-AAAAAAAAC---A-AA-----AAACC-TATTCATAGGGATCATT-AAAACCAAATAGGA---------ACACATTTGGC-TCAA-CA-GTTTTTGAGAAGAACA-TTT-TT
gi|30997 : GCCCCAATCAACCATAGT--CCC-T-T-T--ATT-TGA-AAAAAA--C-TTG-AA-----ACCCC-TATTTATATAGATCATT-TATAACAAATATTC---------ACAAAATTGAT-TCAT-CA-CTTCTTGAGTAATTAC-TTT-TTGAAAA--TTCATATTTtagatgatt
Alignments
lowQualScore : 222 1111
lowQualScore : 1 33 11 0 4 333333 11 33 11 4444 777 0 1 888 3 2 3333 1 22 555555555 22222 333 2 1 444444444 2 1111 3 1 1
lowQualScore : . .. .. . . ...... .. .. .. .... ... . . ... . . .... . .. ......... ..... ... . . ......... . .... . . .
lowQualScore : 4 55 88 7 2 777777 88 77 44 4444 222 8 0 000 9 9 5555 0 00 222222222 44444 666 3 0 000000000 0 5555 1 2 2
consensus : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
Reference ( family-528 ) : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
gi|30957 : ATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30958 : acatatcacttgcagaagatttaaaaaagctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---C---A-AA-----ACTCT---ATCATAGGGTT--TTCTATAGGAAATAGGA---------AAACATTTGAC-CTAC----ATTCATGAGTTGAAGC-TTT-TTGAAGATTCACATTTTcatatttt
gi|30959 : acatatcacttgcagaagatttaaaaaagctatATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30960 : acatatcacttgcagaagatttaaaaaatttatATTTACCTA-TAGCATTCT--CA--T-----ACTTACTATAGAA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCTCAGT--CCA-T-T-T--ATT-AGA-ATAAA---A---A-AA-----ACTCT---ATCATAGGGATAATC-TATAGGAAATATGA---------AAACATTTGAC----C-TGCGTTCTTGAGTTGAAGC-TTT-TTGAAAATTCACATTTTcatatttt
gi|30961 : acatatcacttgaagaagatttaaaaaaagctatATTTACCTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTATTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTT-TATAGGAAATATGA---------AAACATTTGAC-CAAC----ATTCTTGAGTTGAAGC-TTT-TTGAAAACTCACATTTT
gi|30962 : acatatcacttgcagaagattttaaaaaaacgctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-A--ATA--GA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TGTAGGAAATATGA---------AAACATTTGAC-CTAC----GTTCTTGAGTTGAAGC-TTT-TT
gi|30963 : acatatcacttgcagaagatttaaaaaagctatATTTACTTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTGTTTTAAT----A---CAAGGCCTCGGTTGACCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA-------A-AA-----AATGT-CTATCATAGGGATATTC-TAAAGAAAATATGA---------AAACATTTGAC-CAAC----GTTCTTG------AGC-TTT-TTGAAAATTCACATTTTtcatttttt
gi|30964 : acatatcatttgcagaagatttaaaaaaatctatATTTTCCTA-TAGTATTCC--TA--AGTAAAACTCA------AA--GTTCCCT--T----A---CAGGGCTTCTATACACCCCAGTG-CCCAT-T-G--ATT-GGT-TCAAA---C-TTA-GA-----ACTTT-TAATCATAGGCATATTT-TATATCAAATATAA---------ACACATTTGAC-TGAC-AA-GGTGTTGAGAATAAGA-TTT-TTGAAAATGTTCAATT
gi|30965 : atatatacttaaatgaaaataaaaaaatgagagttttccTTTTTCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACAACCCAGTG-TCC-T-TTG--ATT-TGT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAct
gi|30966 : atttgaaaaatgagaattttccTTCACA-TAGTATTCC--TA--TGTAAAAACTA------AA--GTACCCT--T----A---CTGGGCCCTAATGAACACTAGCT-CCT-T-T----ATT-TGA-ACTAA---C-TTG-AA-----ACTGC-TACAAATAGGGACCATT-TATACCAAATAAGA---------ACAAATTTGGC-TGAT-TT-GTTCTTGAGAAAAAGC-TTT-TTAGAAATTTACATTTT
gi|30967 : tttgagaattatctgtgATTTACCCA-TAGCGTTCT--TA--TGTTAAACTTT------AA--GTGTCCT--T----G---CAGGGTCCCTATAAATACTAGC--CCC-T-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCC-TACTCATAAGGATAACT-TATAGCAAATATGA---------ACAAATGTAAG-TGTC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATGTTCAATTT
gi|30968 : aaagaagacagTTTTCCAA-TAGTATTCC--TA--TATAAAACTCA----------GTCCCCT--T----A---CAGGGCCC-TATAAATTCAAG-A-CCC-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-CATATCAAATATGA---------ACAAATTTGAC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTT
gi|30969 : aaaaaagagaattttctgTTTTTCAA-TAGTATTCC--TA--TATAAAACTCA------AA--AACCCTT--A----A---CAGGGCCCCTATACATACAAG-A-CCC-T-T-G--ATT-TGT-ATAAA---C-TTT-AA-----ACCCA-TACTTATTTGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTTt
gi|30970 : aaaaaagagaatATTTTCCCA-CAGTATTCC--TA--TGTAAAACTCA------AA--A-ACCCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-AGAC-TA-GTTGTTGAAAGTAAGA-TTT-TTGACAATGTTCAATTTt
gi|30971 : aaaaaaattcTTTTTCTA-TAGTAATCC--TA--TGTAAAAATCA------AA--GTCCTAT--T----A---CTGGACCATGATAGATCCTAGC--CCC-T-T-C--ATT-TGA-ATAAA---C-ATG-AA-----ACTCC-TATACATAAGGATCATT-TATACAAAATATGA---------ACACATTTGGCTTGACAC---TTCTTAAGAGGAAGA-TCT-TTt
gi|30972 : tgTTTTCCAA-TAGTATTCC--TA--TATAAAA-TCA------AA--GTCAGTT--T----A---TGGGACCCCAGTATACCGTAAC--CCA-T-T-T--ATT-TGA-ACAAC---T-TTG-AA-----ACCTC-TATTCATAGGGttaa
gi|30973 : tgTTTTCCCA-TAGTATTCT--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGTGCCCCTATAAATACAAGC--CAA-C-T-G--GTT-TGT-ACAAA---C-TTC-AA-----AC-------TCATAGAGATAATC-TATATGAAATATGA---------ACAAATTTGAC-CGAC-TG-GTTGTTGAGAAGA--T-TTT-TTTAAAATTTTCTATTT
gi|30974 : tgTTTTCCCA-TAGTATTCC--CA--TGTAAAATTCT------AA--GTCCCCT--T----A---CAGGGCCCCTATAAATCCTAGC--CCC-T-T-ATTATTATCT-GCAA-------TC-AA-----ACCCC-TACACATAGGGATAATT-TATGCCAAATATGA---------ACAAATCTGACATG-C-C--GTTCTTAAGt
gi|30975 : tgATTTTCCCA-TAGTATTCC--TA--TTTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAATAAGA-TTT-ATGACAATGTTCAATTT
gi|30976 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------A---GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTG-CCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGATTAAGA-TTT-ATGACAATGTTCAATTT
gi|30977 : ATTTTCCAA-TAGTATTCC--TA--TATAAAAC-CA------AA--GTCCTCT--T----A---CAGGGCCC-TATAAATACAAG-A-CCA-T-T-G--ATT-GGT-ACAAA---C-CTT-AA-----ACCCA-TACTCATTGGGAAAATC-CATATCAAATATGA---------ATAAATTTGAC-TGAC-CA-GTTGTTGAGAAAAAGA-TTT-TTGAAAATGTTCTATTTt
gi|30978 : ATTTTCCCA-TAATATTCC--TA--TGTTAAACTCA------AA--G-ACCCT--T----A---CAGGGCCTCTATACATCCCATTGTCCC-T-T-G--ATA-TGT-ACAAA---A-TTA-GA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATAGGA---------AAAAATTTGAC-CAAC-AG-GTTGTTGAt
gi|30979 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCTT--T----A---CAGGGCCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TTTTACAAA---C-TTA-AC-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CT-GTTGCTGAGAATAAGA-TTT-ATGAAAATT
gi|30980 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAAGGCCTCTATATATCCCAGTG-CCC-CAT-G--ATT-TGT-ACAAA---C-TCA-GA-----ACTCA-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-GA-GCTGCTGAGAATAAGA-TTT-ATGAAAATGTTCCATTT
gi|30981 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTAT------AA--GTTCCCT--T----A---CAGGGCCTCTTTACATCCCAGTG-CCC-CAT-G--ATT-CCT-ACAGA---C-TTA-GATTAGAACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAT-TGAC-CA-GTAGTTGAGAACAAAA--TT-TTGAAAATGTTCAATTTt
gi|30982 : ATTTTCTCA-TAGTATTCC--TA--TGTAAAACTCA------AAAAG-ACCCT--T----A---CAGGGCCTCTATGCATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATAAAATATGA---------ACAAATT-----TGAC-CT-GTTTTTGAt
gi|30983 : ATTTCCCCA-TAGTATTCC--TA--CATATAACTCA------AT--G-ACCCT--T----A---CAGGGCCCCTATAAATACAAGC--CCC-T-T-G--ATT-TAT-ACAAA---C-TT---------------TA---ATAGGGATAATC-TATATGAAATATAATCTGTATAAACACATTTGAC-TGAC-CT-GTTGTTGAGAAGAAGA-ATT-TTGAAAATATTCTATTT
gi|30984 : TTTTCCAA-TAGTATTCC--TA--TATAAAACTCA------AA--ACTCCCT--A----A---CAGAGCCCCTATAAATACAAA-A-CCA-T-T-G--ATT-TGT-ATAAA---A-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATt
gi|30985 : TTTCCCAATAGTATTCC--TA--TATAAATCTCA------AA--GCCCCCT--T----A---CAGGGACC-TATAAATACAAG-A-CCT-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGAAGAAGA-TTT-TTGAACATTTTTTATTT
gi|30986 : AGTATTCC--TA--TATAAAACTCA------AA--GTCTCCT--T----A---CAGGGCCCCTATACAGACAAAC--CCC-T-T-G--ATT-TGT-ACAAA-----TTATAA-----ACCCA-TTCTCATTGGGATATTC-TATATCAAATATGA---------ACAAATTTGTC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTATATTTt
gi|30987 : AGTGTTCC--CAAATATACAAATTA------AA--GTCTCTT--T----A---C-GGGCACCTGTAAACCCTAGC--CGG-T-T-T--ACT-TGA-ACAAA---AGTTA-AA-----CCTCT--ATTCATAGGGATCATT-TAAACCAAATATGA---------ACATATTTGAC-TTAT-CA-AATTTTGAGAt
gi|30988 : --T----A---CTGGACCCCGATAGAACCTAGC--CCT-T-T-T--ACT--GA-ATAAA---C-TTG-AA-----ACCCC-TATCCATAGAGATCATT-TACACCAATTATAA---------ACAAATTTGGT-TTGT-CG-GTC-TTGAGATGAAGA-TTT-TTGAAAATTCACAATTTtg
gi|30989 : --T----A---CTGGACCCCAATAGACCCTAGC--CCC-TGT-G---TT-TGA-ACAAA---C-AAG-AA-----AGCCC-TACTCATAGTGATCATT-TATATCAAATATGA---------TAGAATTTGGC-TGGA-CA-GTTCTTGAGAAGAAGATTTT-TTGAAAATTCACAATTTt
gi|30990 : --T----A---CTGGGCCCCAATGAACACCGACA-TCT-T-T----ATT-TGA-ACAAA---C-TGG-AA-----ACCCC-TACTCATAGGGACCATT-TATACCAAATATGA---------ACAAATTTGGC-CGAC-TT-GTTCTTGAGAAAAATA-TTT-TTAGAAATTCATAATTT
gi|30991 : --T----A---CAGGGTCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTA-GA-----ACTCT-TAATCATAGGGATAATT-CATATCAAATATGA---------ACAAATTTGAC-TGAC-TG-GTTGTTGAG--TAAGA-TTT-ATGAt
gi|30992 : --T----A---CTGGACCCCAATAGATCATGGC--CCC-T-T-C--ATT-TGA-AAAAA---C-ACG-AA-----ACCCTGTTCTCATAGGGATCATT-CATACCAAATATGA---------ACGAATTTGGC-TGGA-CA-GTTCTTAAGAAGAAGA-TTTGTTTAAAATT
gi|30993 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTca
gi|30994 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTt
gi|30995 : --T----A---CAGGATCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCT-TAGTCATAGAGATAATC-TTTATCAAATATGA---------AAAAATTTGAC-TGAC-AA-GTTGTTGAGt
gi|30996 : GGCCCCAATAAACACTAGT--CCC-T-T-T--ACT-TGA-AAAAAAAAC---A-AA-----AAACC-TATTCATAGGGATCATT-AAAACCAAATAGGA---------ACACATTTGGC-TCAA-CA-GTTTTTGAGAAGAACA-TTT-TT
gi|30997 : GCCCCAATCAACCATAGT--CCC-T-T-T--ATT-TGA-AAAAAA--C-TTG-AA-----ACCCC-TATTTATATAGATCATT-TATAACAAATATTC---------ACAAAATTGAT-TCAT-CA-CTTCTTGAGTAATTAC-TTT-TTGAAAATTtagatgatt
Alignments
lowQualScore : 222 1111
lowQualScore : 1 33 11 0 4 333333 11 33 11 4444 777 0 1 888 3 2 3333 1 22 555555555 22222 333 2 1 444444444 2 1111 3 1 1
lowQualScore : . .. .. . . ...... .. .. .. .... ... . . ... . . .... . .. ......... ..... ... . . ......... . .... . . .
lowQualScore : 4 55 88 7 2 777777 88 77 44 4444 222 8 0 000 9 9 5555 0 00 222222222 44444 666 3 0 000000000 0 5555 1 2 2
consensus : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
Reference ( family-528 ) : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
gi|30957 : ATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30958 : acatatcacttgcagaagatttaaaaaagctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---C---A-AA-----ACTCT---ATCATAGGGTT--TTCTATAGGAAATAGGA---------AAACATTTGAC-CTAC----ATTCATGAGTTGAAGC-TTT-TTGAAGATTCACATTTTcatatttt
gi|30959 : acatatcacttgcagaagatttaaaaaagctatATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30960 : acatatcacttgcagaagatttaaaaaatttatATTTACCTA-TAGCATTCT--CA--T-----ACTTACTATAGAA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCTCAGT--CCA-T-T-T--ATT-AGA-ATAAA---A---A-AA-----ACTCT---ATCATAGGGATAATC-TATAGGAAATATGA---------AAACATTTGAC----C-TGCGTTCTTGAGTTGAAGC-TTT-TTGAAAATTCACATTTTcatatttt
gi|30961 : acatatcacttgaagaagatttaaaaaaagctatATTTACCTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTATTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTT-TATAGGAAATATGA---------AAACATTTGAC-CAAC----ATTCTTGAGTTGAAGC-TTT-TTGAAAACTCACATTTT
gi|30962 : acatatcacttgcagaagattttaaaaaaacgctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-A--ATA--GA-ATAAA---G---A-AA-----ACTCT---ATCATAGGGATATTC-TGTAGGAAATATGA---------AAACATTTGAC-CTAC----GTTCTTGAGTTGAAGC-TTT-TT
gi|30963 : acatatcacttgcagaagatttaaaaaagctatATTTACTTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTGTTTTAAT----A---CAAGGCCTCGGTTGACCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA-------A-AA-----AATGT-CTATCATAGGGATATTC-TAAAGAAAATATGA---------AAACATTTGAC-CAAC----GTTCTTG------AGC-TTT-TTGAAAATTCACATTTTtcatttttt
gi|30964 : acatatcatttgcagaagatttaaaaaaatctatATTTTCCTA-TAGTATTCC--TA--AGTAAAACTCA------AA--GTTCCCT--T----A---CAGGGCTTCTATACACCCCAGTG-CCCAT-T-G--ATT-GGT-TCAAA---C-TTA-GA-----ACTTT-TAATCATAGGCATATTT-TATATCAAATATAA---------ACACATTTGAC-TGAC-AA-GGTGTTGAGAATAAGA-TTT-TTGAAAATGTTCAATT
gi|30965 : atatatacttaaatgaaaataaaaaaatgagagttttccTTTTTCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACAACCCAGTG-TCC-T-TTG--ATT-TGT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAct
gi|30966 : atttgaaaaatgagaattttccTTCACA-TAGTATTCC--TA--TGTAAAAACTA------AA--GTACCCT--T----A---CTGGGCCCTAATGAACACTAGCT-CCT-T-T----ATT-TGA-ACTAA---C-TTG-AA-----ACTGC-TACAAATAGGGACCATT-TATACCAAATAAGA---------ACAAATTTGGC-TGAT-TT-GTTCTTGAGAAAAAGC-TTT-TTAGAAATTTACATTTT
gi|30967 : tttgagaattatctgtgATTTACCCA-TAGCGTTCT--TA--TGTTAAACTTT------AA--GTGTCCT--T----G---CAGGGTCCCTATAAATACTAGC--CCC-T-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCC-TACTCATAAGGATAACT-TATAGCAAATATGA---------ACAAATGTAAG-TGTC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATGTTCAATTT
gi|30968 : aaagaagacagTTTTCCAA-TAGTATTCC--TA--TATAAAACTCA----------GTCCCCT--T----A---CAGGGCCC-TATAAATTCAAG-A-CCC-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-CATATCAAATATGA---------ACAAATTTGAC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTT
gi|30969 : aaaaaagagaattttctgTTTTTCAA-TAGTATTCC--TA--TATAAAACTCA------AA--AACCCTT--A----A---CAGGGCCCCTATACATACAAG-A-CCC-T-T-G--ATT-TGT-ATAAA---C-TTT-AA-----ACCCA-TACTTATTTGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTTt
gi|30970 : aaaaaagagaatATTTTCCCA-CAGTATTCC--TA--TGTAAAACTCA------AA--A-ACCCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-AGAC-TA-GTTGTTGAAAGTAAGA-TTT-TTGACAATGTTCAATTTt
gi|30971 : aaaaaaattcTTTTTCTA-TAGTAATCC--TA--TGTAAAAATCA------AA--GTCCTAT--T----A---CTGGACCATGATAGATCCTAGC--CCC-T-T-C--ATT-TGA-ATAAA---C-ATG-AA-----ACTCC-TATACATAAGGATCATT-TATACAAAATATGA---------ACACATTTGGCTTGACAC---TTCTTAAGAGGAAGA-TCT-TTt
gi|30972 : tgTTTTCCAA-TAGTATTCC--TA--TATAAAA-TCA------AA--GTCAGTT--T----A---TGGGACCCCAGTATACCGTAAC--CCA-T-T-T--ATT-TGA-ACAAC---T-TTG-AA-----ACCTC-TATTCATAGGGttaa
gi|30973 : tgTTTTCCCA-TAGTATTCT--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGTGCCCCTATAAATACAAGC--CAA-C-T-G--GTT-TGT-ACAAA---C-TTC-AA-----AC-------TCATAGAGATAATC-TATATGAAATATGA---------ACAAATTTGAC-CGAC-TG-GTTGTTGAGAAGA--T-TTT-TTTAAAATTTTCTATTT
gi|30974 : tgTTTTCCCA-TAGTATTCC--CA--TGTAAAATTCT------AA--GTCCCCT--T----A---CAGGGCCCCTATAAATCCTAGC--CCC-T-T-ATTATTATCT-GCAA-------TC-AA-----ACCCC-TACACATAGGGATAATT-TATGCCAAATATGA---------ACAAATCTGACATG-C-C--GTTCTTAAGt
gi|30975 : tgATTTTCCCA-TAGTATTCC--TA--TTTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAATAAGA-TTT-ATGACAATGTTCAATTT
gi|30976 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------A---GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTG-CCC-T-T-G--ATT-TTT-ACAAA---C-TTA-AA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGATTAAGA-TTT-ATGACAATGTTCAATTT
gi|30977 : ATTTTCCAA-TAGTATTCC--TA--TATAAAAC-CA------AA--GTCCTCT--T----A---CAGGGCCC-TATAAATACAAG-A-CCA-T-T-G--ATT-GGT-ACAAA---C-CTT-AA-----ACCCA-TACTCATTGGGAAAATC-CATATCAAATATGA---------ATAAATTTGAC-TGAC-CA-GTTGTTGAGAAAAAGA-TTT-TTGAAAATGTTCTATTTt
gi|30978 : ATTTTCCCA-TAATATTCC--TA--TGTTAAACTCA------AA--G-ACCCT--T----A---CAGGGCCTCTATACATCCCATTGTCCC-T-T-G--ATA-TGT-ACAAA---A-TTA-GA-----ACTCT-TAATCATAGGGATAATT-TATATCAAATAGGA---------AAAAATTTGAC-CAAC-AG-GTTGTTGAt
gi|30979 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCTT--T----A---CAGGGCCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TTTTACAAA---C-TTA-AC-----ACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CT-GTTGCTGAGAATAAGA-TTT-ATGAAAATT
gi|30980 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAAGGCCTCTATATATCCCAGTG-CCC-CAT-G--ATT-TGT-ACAAA---C-TCA-GA-----ACTCA-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-GA-GCTGCTGAGAATAAGA-TTT-ATGAAAATGTTCCATTT
gi|30981 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTAT------AA--GTTCCCT--T----A---CAGGGCCTCTTTACATCCCAGTG-CCC-CAT-G--ATT-CCT-ACAGA---C-TTA-GATTAGAACTCT-TAATCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAT-TGAC-CA-GTAGTTGAGAACAAAA--TT-TTGAAAATGTTCAATTTt
gi|30982 : ATTTTCTCA-TAGTATTCC--TA--TGTAAAACTCA------AAAAG-ACCCT--T----A---CAGGGCCTCTATGCATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---C-TTA-GA-----TTTCT-TAATCATAGGGATAATT-TATATAAAATATGA---------ACAAATT-----TGAC-CT-GTTTTTGAt
gi|30983 : ATTTCCCCA-TAGTATTCC--TA--CATATAACTCA------AT--G-ACCCT--T----A---CAGGGCCCCTATAAATACAAGC--CCC-T-T-G--ATT-TAT-ACAAA---C-TT---------------TA---ATAGGGATAATC-TATATGAAATATAATCTGTATAAACACATTTGAC-TGAC-CT-GTTGTTGAGAAGAAGA-ATT-TTGAAAATATTCTATTT
gi|30984 : TTTTCCAA-TAGTATTCC--TA--TATAAAACTCA------AA--ACTCCCT--A----A---CAGAGCCCCTATAAATACAAA-A-CCA-T-T-G--ATT-TGT-ATAAA---A-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATt
gi|30985 : TTTCCCAATAGTATTCC--TA--TATAAATCTCA------AA--GCCCCCT--T----A---CAGGGACC-TATAAATACAAG-A-CCT-T-T-G--ATT-TGT-ACAAA---C-TTT-AA-----ACCCA-TACTCATTGGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGAAGAAGA-TTT-TTGAACATTTTTTATTT
gi|30986 : AGTATTCC--TA--TATAAAACTCA------AA--GTCTCCT--T----A---CAGGGCCCCTATACAGACAAAC--CCC-T-T-G--ATT-TGT-ACAAA-----TTATAA-----ACCCA-TTCTCATTGGGATATTC-TATATCAAATATGA---------ACAAATTTGTC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTATATTTt
gi|30987 : AGTGTTCC--CAAATATACAAATTA------AA--GTCTCTT--T----A---C-GGGCACCTGTAAACCCTAGC--CGG-T-T-T--ACT-TGA-ACAAA---AGTTA-AA-----CCTCT--ATTCATAGGGATCATT-TAAACCAAATATGA---------ACATATTTGAC-TTAT-CA-AATTTTGAGAt
gi|30988 : --T----A---CTGGACCCCGATAGAACCTAGC--CCT-T-T-T--ACT--GA-ATAAA---C-TTG-AA-----ACCCC-TATCCATAGAGATCATT-TACACCAATTATAA---------ACAAATTTGGT-TTGT-CG-GTC-TTGAGATGAAGA-TTT-TTGAAAATTCACAATTTtg
gi|30989 : --T----A---CTGGACCCCAATAGACCCTAGC--CCC-TGT-G---TT-TGA-ACAAA---C-AAG-AA-----AGCCC-TACTCATAGTGATCATT-TATATCAAATATGA---------TAGAATTTGGC-TGGA-CA-GTTCTTGAGAAGAAGATTTT-TTGAAAATTCACAATTTt
gi|30990 : --T----A---CTGGGCCCCAATGAACACCGACA-TCT-T-T----ATT-TGA-ACAAA---C-TGG-AA-----ACCCC-TACTCATAGGGACCATT-TATACCAAATATGA---------ACAAATTTGGC-CGAC-TT-GTTCTTGAGAAAAATA-TTT-TTAGAAATTCATAATTT
gi|30991 : --T----A---CAGGGTCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTA-GA-----ACTCT-TAATCATAGGGATAATT-CATATCAAATATGA---------ACAAATTTGAC-TGAC-TG-GTTGTTGAG--TAAGA-TTT-ATGAt
gi|30992 : --T----A---CTGGACCCCAATAGATCATGGC--CCC-T-T-C--ATT-TGA-AAAAA---C-ACG-AA-----ACCCTGTTCTCATAGGGATCATT-CATACCAAATATGA---------ACGAATTTGGC-TGGA-CA-GTTCTTAAGAAGAAGA-TTTGTTTAAAATT
gi|30993 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTca
gi|30994 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---C-TTC-AA-----ATCCC-AACTCATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTt
gi|30995 : --T----A---CAGGATCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---C-TTC-AA-----ACTCT-TAGTCATAGAGATAATC-TTTATCAAATATGA---------AAAAATTTGAC-TGAC-AA-GTTGTTGAGt
gi|30996 : GGCCCCAATAAACACTAGT--CCC-T-T-T--ACT-TGA-AAAAAAAAC---A-AA-----AAACC-TATTCATAGGGATCATT-AAAACCAAATAGGA---------ACACATTTGGC-TCAA-CA-GTTTTTGAGAAGAACA-TTT-TT
gi|30997 : GCCCCAATCAACCATAGT--CCC-T-T-T--ATT-TGA-AAAAAA--C-TTG-AA-----ACCCC-TATTTATATAGATCATT-TATAACAAATATTC---------ACAAAATTGAT-TCAT-CA-CTTCTTGAGTAATTAC-TTT-TTGAAAATTtagatgatt
blockSeqs : A CA AA C CTATAG AA TG AA TAAT ATA G TGT A A ATT TT AGTTA TTAGA TGT A C TCTGTATAA T TGC C T G
blockSeqs : . CA . C . . TG . . ATA G TGT C A TG A AAACA . TC A . . A AA C . .
blockSeqs : . . . C . . TG . . ATA G TGT C G T A ACTTG . TT A . . . CG C . .
blockSeqs : . . . A . . TA . . ATA G TGT C . T A CTTA . TT A . . . TT C . .
blockSeqs : . . . C . . TG . . . G TG . . T A CTTA . CT A . . . CG C . .
blockSeqs : . . . C . . TG . . . G TG . . T A CTTG . CT A . . . CA C . .
blockSeqs : . . . C . . TT . . . C CT . . A A CTTC . AT A . . . CG G . .
blockSeqs : . . . C . . AC . . . C TG . . T T CTTT . AT A . . . TA G . .
blockSeqs : . . . A . . TA . . . A TG . . G T CTTT . TT C . . . AC C . .
blockSeqs : . . . C . . TG . . . A TG . . G A CTTA . CT C . . . TG G . .
blockSeqs : . . . T . . TC . . . A TG . . G T CATG . CT C . . . CG G . .
blockSeqs : . . . C . . AC . . . C CA . . G T TTTG . CT C . . . AG G . .
blockSeqs : . . . C . . TC . . . C TG . . G T CTTC . TT A . . . CA G . .
blockSeqs : . . . C . . TC . . . G TG . . C T CTTA . TT T . . . AG C . .
blockSeqs : . . . C . . TC . . . T A . . T A CTTA . AT T . . . CT G . .
blockSeqs : . . . C . . TC . . . A A . . G A CCTT . TT C . . . GA C . .
blockSeqs : . . . C . . AC . . . A T . . G T ATTA . TT A . . . CA G . .
blockSeqs : . . . C . . AC . . . C T . . G T CTTA . AT A . . . CT G . .
blockSeqs : . . . C . . TC . . . C T . . G T CTCA . TT C . . . CT G . .
blockSeqs : . . . C . . TC . . . A T . . G T CTTA . TT A . . . CG G . .
blockSeqs : . . . C . . TC . . . C C . . G T CTTA . AT A . . . AG G . .
blockSeqs : . . . C . . TT . . . C A . . G T ATTT . AT A . . . CA G . .
blockSeqs : . . . C . . CT . . . T A . . G T CTTT . AT A . . . CA G . .
blockSeqs : . . . A . . CC . . . C C . . G T TTAT . CT A . . . CG T . .
blockSeqs : . . . . . . TC . . . C C . . G T CTTG . CT C . . . CA G . .
blockSeqs : . . . . . . TC . . . A C . . G T CAAG . CT C . . . TT G . .
blockSeqs : . . . . . . A . . . A C . . G T CTGG . TT C . . . TG G . .
blockSeqs : . . . . . . A . . . A A . . G T CTTA . CA T . . . CA G . .
blockSeqs : . . . . . A . . . C C . . T T CACG . CA T . . . AG T . .
blockSeqs : . . . . . A . . . A A . . T A CTTC . TT C . . . AG C . .
blockSeqs : . . . G A . . G A CTTC . CT C . . . AA C . .
blockSeqs : . . . G C . . G A CTTC . CT A . . . CA G . .
blockSeqs : . . . A C . . C A CTT . T C . . . CA C . .
blockSeqs : . . . C C . . G T CA . T C . . . C T
blockSeqs : . . . G C . . G A GA . T C . . . . T
blockSeqs : . . . A C . . G A AA . T G . . . . G
blockSeqs : . . . A C . . T A GA . T T . . . . T
blockSeqs : . . . C C . . T T GA . T T . . . . C
blockSeqs : A T . . . A TC . T . . . . . .
blockSeqs : A T . . . A A . . .
blockSeqCons : **** CTTN***** CT* CG**
originalCons : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---C-TTA-AA-----ACTCT-TANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
finalCons : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAACTTN-----AA-----ACTCCT-ANTCATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGACCG--GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
Alignments
lowQualScore : 222 1111
lowQualScore : 1 33 11 0 4 333333 11 33 11 4444 777 0 1 888 3 2 3333 1 22 222 4 1 22222 0 7 8 11 1 444444444 2 1111 3 1 1
lowQualScore : . .. .. . . ...... .. .. .. .... ... . . ... . . .... . .. ... . . ..... . . . .. . ......... . .... . . .
lowQualScore : 4 55 88 7 2 777777 88 77 44 4444 222 8 0 000 9 9 5555 0 00 777 0 0 44444 7 1 3 33 0 000000000 0 5555 1 2 2
consensus : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---CTTNAA-----ACCCCTANTC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
Reference ( family-528 ) : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGGGCCCCTATANATCCCAGCG-CCC-T-T-G--ATT-TGN-ACAAA---CTTNAA-----ACTCCTANTC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCAATTT
gi|30957 : ATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G--AAA-----ACTC-TA-TC--ATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30958 : acatatcacttgcagaagatttaaaaaagctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---C--AAA-----ACTC-TA-TC--ATAGGGTT--TTCTATAGGAAATAGGA---------AAACATTTGAC-CTAC----ATTCATGAGTTGAAGC-TTT-TTGAAGATTCACATTTTcatatttt
gi|30959 : acatatcacttgcagaagatttaaaaaagctatATTTATCTA-TAGCATTCT--CA--TATACTA-TAA------AA--GTGTTTT--TTAATA---CAAGGTCTCGGTAGACCCCAG-A-CCA-T-T-T--ATT-AGA-ATAAA---G--AAA-----ACTC-TA-TC--ATAGGGATATTC-TATAAGAAATAGGA---------AAACATCTGAC-CTAC----ATTCTTGAGTTGAAGG-TTT-TTGAAGATT
gi|30960 : acatatcacttgcagaagatttaaaaaatttatATTTACCTA-TAGCATTCT--CA--T-----ACTTACTATAGAA--GTGTTTT--T----AATACAAGGCCTCGGTAGACCTCAGT--CCA-T-T-T--ATT-AGA-ATAAA---A--AAA-----ACTC-TA-TC--ATAGGGATAATC-TATAGGAAATATGA---------AAACATTTGAC----C-TGCGTTCTTGAGTTGAAGC-TTT-TTGAAAATTCACATTTTcatatttt
gi|30961 : acatatcacttgaagaagatttaaaaaaagctatATTTACCTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTATTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA---G--AAA-----ACTC-TA-TC--ATAGGGATATTT-TATAGGAAATATGA---------AAACATTTGAC-CAAC----ATTCTTGAGTTGAAGC-TTT-TTGAAAACTCACATTTT
gi|30962 : acatatcacttgcagaagattttaaaaaaacgctatATTTACCTA-TAGCATTCT--CA--TATACTA-TAG------AA--GTGTTTT--T----AATACAAGGCCTCAGTAGATCCCAGT--CCA-T-T-A--ATA--GA-ATAAA---G--AAA-----ACTC-TA-TC--ATAGGGATATTC-TGTAGGAAATATGA---------AAACATTTGAC-CTAC----GTTCTTGAGTTGAAGC-TTT-TT
gi|30963 : acatatcacttgcagaagatttaaaaaagctatATTTACTTA-TAGCATTCTCATA--TTTACTA-TAG------AA--GTGTTTTAAT----A---CAAGGCCTCGGTTGACCCCAGT--CCA-T-T-T--ATT-AGA-ATAAA---A--AAA-----ATGTCTA-TC--ATAGGGATATTC-TAAAGAAAATATGA---------AAACATTTGAC-CAAC----GTTCTTG------AGC-TTT-TTGAAAATTCACATTTTtcatttttt
gi|30964 : acatatcatttgcagaagatttaaaaaaatctatATTTTCCTA-TAGTATTCC--TA--AGTAAAACTCA------AA--GTTCCCT--T----A---CAGGGCTTCTATACACCCCAGTG-CCCAT-T-G--ATT-GGT-TCAAA---CTTAGA-----ACTTTTAATC--ATAGGCATATTT-TATATCAAATATAA---------ACACATTTGAC-TGAC-AA-GGTGTTGAGAATAAGA-TTT-TTGAAAATGTTCAATT
gi|30965 : atatatacttaaatgaaaataaaaaaatgagagttttccTTTTTCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACAACCCAGTG-TCC-T-TTG--ATT-TGT-ACAAA---CTTAAA-----ACTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAct
gi|30966 : atttgaaaaatgagaattttccTTCACA-TAGTATTCC--TA--TGTAAAAACTA------AA--GTACCCT--T----A---CTGGGCCCTAATGAACACTAGCT-CCT-T-T----ATT-TGA-ACTAA---CTTGAA-----ACTGCTACAA--ATAGGGACCATT-TATACCAAATAAGA---------ACAAATTTGGC-TGAT-TT-GTTCTTGAGAAAAAGC-TTT-TTAGAAATTTACATTTT
gi|30967 : tttgagaattatctgtgATTTACCCA-TAGCGTTCT--TA--TGTTAAACTTT------AA--GTGTCCT--T----G---CAGGGTCCCTATAAATACTAGC--CCC-T-T-G--ATT-TGT-ACAAA---CTTCAA-----ACTCCTACTC--ATAAGGATAACT-TATAGCAAATATGA---------ACAAATGTAAG-TGTC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATGTTCAATTT
gi|30968 : aaagaagacagTTTTCCAA-TAGTATTCC--TA--TATAAAACTCA----------GTCCCCT--T----A---CAGGGCCC-TATAAATTCAAG-A-CCC-T-T-G--ATT-TGT-ACAAA---CTTTAA-----ACCCATACTC--ATTGGGATAATC-CATATCAAATATGA---------ACAAATTTGAC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTT
gi|30969 : aaaaaagagaattttctgTTTTTCAA-TAGTATTCC--TA--TATAAAACTCA------AA--AACCCTT--A----A---CAGGGCCCCTATACATACAAG-A-CCC-T-T-G--ATT-TGT-ATAAA---CTTTAA-----ACCCATACTT--ATTTGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTCTATTTt
gi|30970 : aaaaaagagaatATTTTCCCA-CAGTATTCC--TA--TGTAAAACTCA------AA--A-ACCCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---CTTAGA-----TTTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-AGAC-TA-GTTGTTGAAAGTAAGA-TTT-TTGACAATGTTCAATTTt
gi|30971 : aaaaaaattcTTTTTCTA-TAGTAATCC--TA--TGTAAAAATCA------AA--GTCCTAT--T----A---CTGGACCATGATAGATCCTAGC--CCC-T-T-C--ATT-TGA-ATAAA---CATGAA-----ACTCCTATAC--ATAAGGATCATT-TATACAAAATATGA---------ACACATTTGGCTTGACAC---TTCTTAAGAGGAAGA-TCT-TTt
gi|30972 : tgTTTTCCAA-TAGTATTCC--TA--TATAAAA-TCA------AA--GTCAGTT--T----A---TGGGACCCCAGTATACCGTAAC--CCA-T-T-T--ATT-TGA-ACAAC---TTTGAA-----ACCTCTATTC--ATAGGGttaa
gi|30973 : tgTTTTCCCA-TAGTATTCT--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAGTGCCCCTATAAATACAAGC--CAA-C-T-G--GTT-TGT-ACAAA---CTTCAA-----AC------TC--ATAGAGATAATC-TATATGAAATATGA---------ACAAATTTGAC-CGAC-TG-GTTGTTGAGAAGA--T-TTT-TTTAAAATTTTCTATTT
gi|30974 : tgTTTTCCCA-TAGTATTCC--CA--TGTAAAATTCT------AA--GTCCCCT--T----A---CAGGGCCCCTATAAATCCTAGC--CCC-T-T-ATTATTATCT-GCAA------TCAA-----ACCCCTACAC--ATAGGGATAATT-TATGCCAAATATGA---------ACAAATCTGACATG-C-C--GTTCTTAAGt
gi|30975 : tgATTTTCCCA-TAGTATTCC--TA--TTTAAAACTCA------AA--GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTGTCCC-T-T-G--ATT-TTT-ACAAA---CTTAAA-----ACTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CG-GTTGTTGAGAATAAGA-TTT-ATGACAATGTTCAATTT
gi|30976 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------A---GACCTCT--T----A---CAGGGCCTCTATACATCCCAGTG-CCC-T-T-G--ATT-TTT-ACAAA---CTTAAA-----ACTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGATTAAGA-TTT-ATGACAATGTTCAATTT
gi|30977 : ATTTTCCAA-TAGTATTCC--TA--TATAAAAC-CA------AA--GTCCTCT--T----A---CAGGGCCC-TATAAATACAAG-A-CCA-T-T-G--ATT-GGT-ACAAA---CCTTAA-----ACCCATACTC--ATTGGGAAAATC-CATATCAAATATGA---------ATAAATTTGAC-TGAC-CA-GTTGTTGAGAAAAAGA-TTT-TTGAAAATGTTCTATTTt
gi|30978 : ATTTTCCCA-TAATATTCC--TA--TGTTAAACTCA------AA--G-ACCCT--T----A---CAGGGCCTCTATACATCCCATTGTCCC-T-T-G--ATA-TGT-ACAAA---ATTAGA-----ACTCTTAATC--ATAGGGATAATT-TATATCAAATAGGA---------AAAAATTTGAC-CAAC-AG-GTTGTTGAt
gi|30979 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCTT--T----A---CAGGGCCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TTTTACAAA---CTTAAC-----ACTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-CT-GTTGCTGAGAATAAGA-TTT-ATGAAAATT
gi|30980 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTCA------AA--GTCCCCT--T----A---CAAGGCCTCTATATATCCCAGTG-CCC-CAT-G--ATT-TGT-ACAAA---CTCAGA-----ACTCATAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAC-TGAC-GA-GCTGCTGAGAATAAGA-TTT-ATGAAAATGTTCCATTT
gi|30981 : ATTTTCCCA-TAGTATTCC--TA--TGTAAAACTAT------AA--GTTCCCT--T----A---CAGGGCCTCTTTACATCCCAGTG-CCC-CAT-G--ATT-CCT-ACAGA---CTTAGATTAGAACTCTTAATC--ATAGGGATAATT-TATATCAAATATGA---------ACAAATTTGAT-TGAC-CA-GTAGTTGAGAACAAAA--TT-TTGAAAATGTTCAATTTt
gi|30982 : ATTTTCTCA-TAGTATTCC--TA--TGTAAAACTCA------AAAAG-ACCCT--T----A---CAGGGCCTCTATGCATCCCAGTGTCCC-T-T-G--ATT-TGT-ACAAA---CTTAGA-----TTTCTTAATC--ATAGGGATAATT-TATATAAAATATGA---------ACAAATT-----TGAC-CT-GTTTTTGAt
gi|30983 : ATTTCCCCA-TAGTATTCC--TA--CATATAACTCA------AT--G-ACCCT--T----A---CAGGGCCCCTATAAATACAAGC--CCC-T-T-G--ATT-TAT-ACAAA---CTTTAA------------------TAGGGATAATC-TATATGAAATATAATCTGTATAAACACATTTGAC-TGAC-CT-GTTGTTGAGAAGAAGA-ATT-TTGAAAATATTCTATTT
gi|30984 : TTTTCCAA-TAGTATTCC--TA--TATAAAACTCA------AA--ACTCCCT--A----A---CAGAGCCCCTATAAATACAAA-A-CCA-T-T-G--ATT-TGT-ATAAA---ATTTAA-----ACCCATACTC--ATTGGGATAATC-TATATCAAATATGA---------ACACATTTGAC-TGAC-CG-GTTGTTGAGAAGAAGA-TTT-TTGAAAATt
gi|30985 : TTTCCCAATAGTATTCC--TA--TATAAATCTCA------AA--GCCCCCT--T----A---CAGGGACC-TATAAATACAAG-A-CCT-T-T-G--ATT-TGT-ACAAA---CTTTAA-----ACCCATACTC--ATTGGGATAATC-TATATCAAATATGA---------ACAAATTTGAC-TGAC-AG-GTTGTTGAGAAGAAGA-TTT-TTGAACATTTTTTATTT
gi|30986 : AGTATTCC--TA--TATAAAACTCA------AA--GTCTCCT--T----A---CAGGGCCCCTATACAGACAAAC--CCC-T-T-G--ATT-TGT-ACAAA---TTATAA-----ACCCATTCTC--ATTGGGATATTC-TATATCAAATATGA---------ACAAATTTGTC-TGAC-CA-GTTGTTGAGAAGAAGA-TTT-TTGAAAATTTTATATTTt
gi|30987 : AGTGTTCC--CAAATATACAAATTA------AA--GTCTCTT--T----A---C-GGGCACCTGTAAACCCTAGC--CGG-T-T-T--ACT-TGA-ACAAA---AGTTAA-----ACCTCTATTC--ATAGGGATCATT-TAAACCAAATATGA---------ACATATTTGAC-TTAT-CA-AATTTTGAGAt
gi|30988 : --T----A---CTGGACCCCGATAGAACCTAGC--CCT-T-T-T--ACT--GA-ATAAA---CTTGAA-----ACCCCTATCC--ATAGAGATCATT-TACACCAATTATAA---------ACAAATTTGGT-TTGT-CG-GTC-TTGAGATGAAGA-TTT-TTGAAAATTCACAATTTtg
gi|30989 : --T----A---CTGGACCCCAATAGACCCTAGC--CCC-TGT-G---TT-TGA-ACAAA---CAAGAA-----AGCCCTACTC--ATAGTGATCATT-TATATCAAATATGA---------TAGAATTTGGC-TGGA-CA-GTTCTTGAGAAGAAGATTTT-TTGAAAATTCACAATTTt
gi|30990 : --T----A---CTGGGCCCCAATGAACACCGACA-TCT-T-T----ATT-TGA-ACAAA---CTGGAA-----ACCCCTACTC--ATAGGGACCATT-TATACCAAATATGA---------ACAAATTTGGC-CGAC-TT-GTTCTTGAGAAAAATA-TTT-TTAGAAATTCATAATTT
gi|30991 : --T----A---CAGGGTCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---CTTAGA-----ACTCTTAATC--ATAGGGATAATT-CATATCAAATATGA---------ACAAATTTGAC-TGAC-TG-GTTGTTGAG--TAAGA-TTT-ATGAt
gi|30992 : --T----A---CTGGACCCCAATAGATCATGGC--CCC-T-T-C--ATT-TGA-AAAAA---CACGAA-----AC-CCTGTTCTCATAGGGATCATT-CATACCAAATATGA---------ACGAATTTGGC-TGGA-CA-GTTCTTAAGAAGAAGA-TTTGTTTAAAATT
gi|30993 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---CTTCAA-----ATCCCAACTC--ATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTca
gi|30994 : --T----A---CAGGGCCACTGTAAACACTAGC--CCC-T-T-G--ATT-TGA-ACAAA---CTTCAA-----ATCCCAACTC--ATAGGGATAATT-CATATCAAATATGA---------AAAAATATAAC-TGAC-AG-GTTTTTTAAAAAAATA--TC-TTGAAA--TTTCAATTTt
gi|30995 : --T----A---CAGGATCTCTATACATCCCAGTG-CCCCT-T-G--ATT-TGT-ACAAA---CTTCAA-----ACTCTTAGTC--ATAGAGATAATC-TTTATCAAATATGA---------AAAAATTTGAC-TGAC-AA-GTTGTTGAGt
gi|30996 : GGCCCCAATAAACACTAGT--CCC-T-T-T--ACT-TGA-AAAAAAAAC--AAA-----AAACCTATTC--ATAGGGATCATT-AAAACCAAATAGGA---------ACACATTTGGC-TCAA-CA-GTTTTTGAGAAGAACA-TTT-TT
gi|30997 : GCCCCAATCAACCATAGT--CCC-T-T-T--ATT-TGA-AAAAAA--CTTGAA-----ACCCCTATTT--ATATAGATCATT-TATAACAAATATTC---------ACAAAATTGAT-TCAT-CA-CTTCTTGAGTAATTAC-TTT-TTGAAAATTtagatgatt