lowQualScore                  :   7       3       0 2       555                4    3       
lowQualScore                  :   .       .       . .       ...                .    .       
lowQualScore                  :   5       7       4 4       888                8    7       
consensus                     : TTTCCATTTTNAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
Reference ( gi|35440 )        : TTGCCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35445                      : TTGCCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35447                      : TTGCCATTTTCAACAAACCG-CTTTCAGGT-TTCCGATCAATCATCGGGTAACATCGTGA
gi|35441                      : TTGCCATTTTCAACGAACTG-CTTTTGGGT-TTCCGATCAATCATCAGGTAACATCGTGA
gi|35446                      : TTGCCATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAGTCATCCGATAACACCGTGA
gi|35444                      : TTGCCATTTCCAACGAACCG-CTTTCGAGT-TTCCGATCAATCATCGTATAACATCG
gi|35443                      : TTGCCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGcaa
gi|35422                      : TTTCCATTTTGAACGAACTG-CCTTCGGTA-TTCTGATCAACCATTG--TAA-ATCATGAtgaa
gi|35423                      : TTTCCCTTTTGAACGAACCG-CCTTCGGTA-TTCCGACCAACCATCG
gi|35434                      : TTTCCATTTTGAACAAACT--CTTTCTGGTATTCCAATCAACCATC--ATAA-ACTGTGAtaatccgcga
gi|35427                      : TTCCCATTTTGAACAAACTG-CCCTCAGAA-GTCCGATCAACCATCGAA-AAC--CGCGA
gi|35429                      : TTTCCATTTTAAATTAACTG-CTTTCTGTA-TTCCGATCAACCATCG
gi|35432                      : TTTCCATTTTAAACGAACAG-CATTCGGTA-TTCCAATCAACCATtaaaccg
gi|35421                      : TTTCTATTTTGAGCGAACTG-CCTTCGGTA-TTCCGATTAACAATCG--TAA-ACCGCGAagtaaaccac
gi|35424                      : TTTCCATTCTGAACGAACTGGCT--CAAGTATTCCGATCAACCATCG
gi|35426                      : TTTCCATTTTGACCGAAATG-CCTTCGGTA-TTCCGATTAACCACCGtaaactgcga
gi|35425                      : TTTCCATTTTGAAAAAACTG-TCTTCTGTA-TTCCGATCAACCATCGtaaactgcga
gi|35435                      : TTTCCATTTTGACCGAACAG-CCTTCGTA--TTCCGATCAACAATTGtaaaccgc
gi|35431                      : TTTCTATTTTGAAAGAACTG-CCTTCGGTA-TTCAGATCAACACTCG--TAA-ATCACGAtaaac
gi|35430                      : TTTCCATTTTGAACGAACTG-TCTTTAGTA-TTCCAACCAACAATTGTAAAAC-TCG
gi|35439                      : TTTCCATTTTGAATGAACTG-C-------C-TTCTGACCAACTATC--ATAA-ACTGTGAa
gi|35458                      :    CCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35451                      :    CCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGCGA
gi|35460                      :    CCATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAATATCGTGA
gi|35452                      :    CCATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35459                      :    CCGTTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35454                      :    CCATTTTCAACGAACCG-CTTTCAGAT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35453                      :    CCATTTTTAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35461                      :    CCATTTCAAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35455                      :    CCGTTTTCAACGAACTG-CTTTCGGGG-TTCCGATCAATCATCGGATAACATCGTGA
gi|35456                      :    CCATTTCCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGTATAAC
gi|35457                      :    CCATTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35449                      :    CCATTTTGAATGAACTGACTT--GGGTATTCCGATCAACCATCG--TAA-ACCGCGA
gi|35450                      :  ttCCATTTTGAACGAACTA-CCTATGGTA-TTCTGACCAACCATC
gi|35428                      :    ttATTTTGAACGAACTA-CCTCCAGTT-ATCCGATCAACCATCGacaaactgtg
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|35433 ): TTTCTATTTTGAAAGAACTGCCTTCGGTATTAAGATCAACACTCGTAAACCACGA
Unaligned ( gi|35436 ): TTTCCATGTCGAGCAAACTGCCTTTAATGCTCTGATCAATCATCGTAATCCGCGA
Unaligned ( gi|35437 ): TTTCCTATTTTGAACAAACTGCCTTCGATATCCCAATCTGCCACGGTAAACCGCAA
Unaligned ( gi|35438 ): TTTTTATTTTGAACAAACTGCCTTTGTTATCCCCATCAACGATTGTAAACTGTG
Unaligned ( gi|35442 ): TTTCCTAATTTGAACAAAATGTCTTTACTATTCAGATCAACCATTGTAAATCATGA
Unaligned ( gi|35448 ): TTTCTATTTTTTTACGAATTGCCTTCTTTATTCCTATCAACCATTATAAACAGCAA






Alignments
lowQualScore                  :      1     1       0 2       666                3    3       
lowQualScore                  :      .     .       . .       ...                .    .       
lowQualScore                  :      1     0       6 1       555                6    2       
consensus                     : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
Reference ( family-526 )      : TTTCC-ATTTTNAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35421                      : TTTCT-ATTTTGAGCGAACTG-CCTTCGGTA-TTCCGATTAACAATCG--TAA-ACCGCGA
gi|35422                      : TTTCC-ATTTTGAACGAACTG-CCTTCGGTA-TTCTGATCAACCATTG--TAA-ATCATGA
gi|35423                      : TTTCC-CTTTTGAACGAACCG-CCTTCGGTA-TTCCGACCAACCATCG
gi|35424                      : TTTCC-ATTCTGAACGAACTGGCT--CAAGTATTCCGATCAACCATCGtaatccgcga
gi|35425                      : TTTCC-ATTTTGAAAAAACTG-TCTTCTGTA-TTCCGATCAACCATCGtaaactgcga
gi|35426                      : TTTCC-ATTTTGACCGAAATG-CCTTCGGTA-TTCCGATTAACCACCGtaaaccgc
gi|35427                      : TTCCC-ATTTTGAACAAACTG-CCCTCAGAA-GTCCGATCAACCATCGAA-AAC--CGCGAtaaactgcga
gi|35428                      : TTTTT-ATTTTGAACGAACTA-CCTCCAGTT-ATCCGATCAACCATCG
gi|35429                      : TTTCC-ATTTTAAATTAACTG-CTTTCTGTA-TTCCGATCAACCATCGtgaaccgcga
gi|35430                      : TTTCC-ATTTTGAACGAACTG-TCTTTAGTA-TTCCAACCAACAATTGTAAAAC-TCGtaaaccg
gi|35431                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTCAGATCAACACTCG--TAA-ATCACGAa
gi|35432                      : TTTCC-ATTTTAAACGAACAG-CATTCGGTA-TTCCAATCAACCAT
gi|35433                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTAAGATCAACagtaaaccac
gi|35434                      : TTTCC-ATTTTGAACAAACT--CTTTCTGGTATTCCAATCAACCATC--ATAA-ACTGTGAactcgtaaaccacga
gi|35435                      : TTTCC-ATTTTGACCGAACAG-CCTTC--GTATTCCGATCAACAATTG
gi|35436                      : TTTCC-ATGTCGAGCAAACTG-CCTTTAATG-CTCTGATCAATCATCGtaaac
gi|35437                      : TTTCCTATTTTGAACAAACTG-CCTTCGATA-TCCCAATCTGCCA-CGG-TAAtaatccgcga
gi|35439                      : TTTCC-ATTTTGAATGAACTG-C-------C-TTCTGACCAACTATC--ATAA-ACTGTGAaccgcaa
gi|35440                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35441                      : TTGCC-ATTTTCAACGAACTG-CTTTTGGGT-TTCCGATCAATCATCAGGTAACATCGTGA
gi|35443                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35444                      : TTGCC-ATTTCCAACGAACCG-CTTTCGAGT-TTCCGATCAATCATCGTATAACATCGtgaa
gi|35445                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGAcaa
gi|35446                      : TTGCC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAGTCATCCGATAACACCGTGA
gi|35447                      : TTGCC-ATTTTCAACAAACCG-CTTTCAGGT-TTCCGATCAATCATCGGGTAACATCGTGA
gi|35449                      :  TTCC-ATTTTGAATGAACTGACTT--GGGTATTCCGATCAACCATCG--TAA-ACCGCGA
gi|35450                      :  TTCC-ATTTTGAACGAACTA-CCTATGGTA-TTCTGACCAACCATC
gi|35451                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGCGAacaaactgtg
gi|35452                      :    CC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35453                      :    CC-ATTTTTAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35454                      :    CC-ATTTTCAACGAACCG-CTTTCAGAT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35455                      :    CC-GTTTTCAACGAACTG-CTTTCGGGG-TTCCGATCAATCATCGGATAACATCGTGA
gi|35456                      :    CC-ATTTCCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGTATAAC
gi|35457                      :    CC-ATTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35458                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35459                      :    CC-GTTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35460                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAATATCGTGA
gi|35461                      :    CC-ATTTCAAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35438 ): TTTTTATTTTGAACAAACTGCCTTTGTTATCCCCATCAACGATTGTAAACTGTG
Unaligned ( gi|35442 ): TTTCCTAATTTGAACAAAATGTCTTTACTATTCAGATCAACCATTGTAAATCATGA
Unaligned ( gi|35448 ): TTTCTATTTTTTTACGAATTGCCTTCTTTATTCCTATCAACCATTATAAACAGCAA






Alignments
lowQualScore                  :      1     2       0 2       666                3    3       
lowQualScore                  :      .     .       . .       ...                .    .       
lowQualScore                  :      1     4       6 1       555                6    2       
consensus                     : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
Reference ( family-526 )      : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35421                      : TTTCT-ATTTTGAGCGAACTG-CCTTCGGTA-TTCCGATTAACAATCG--TAA-ACCGCGA
gi|35422                      : TTTCC-ATTTTGAACGAACTG-CCTTCGGTA-TTCTGATCAACCATTG--TAA-ATCATGA
gi|35423                      : TTTCC-CTTTTGAACGAACCG-CCTTCGGTA-TTCCGACCAACCATCG
gi|35424                      : TTTCC-ATTCTGAACGAACTGGCT--CAAGTATTCCGATCAACCATCGtaatccgcga
gi|35425                      : TTTCC-ATTTTGAAAAAACTG-TCTTCTGTA-TTCCGATCAACCATCGtaaactgcga
gi|35426                      : TTTCC-ATTTTGACCGAAATG-CCTTCGGTA-TTCCGATTAACCACCGtaaaccgc
gi|35427                      : TTCCC-ATTTTGAACAAACTG-CCCTCAGAA-GTCCGATCAACCATCGAA-AAC--CGCGAtaaactgcga
gi|35428                      : TTTTT-ATTTTGAACGAACTA-CCTCCAGTT-ATCCGATCAACCATCG
gi|35429                      : TTTCC-ATTTTAAATTAACTG-CTTTCTGTA-TTCCGATCAACCATCGtgaaccgcga
gi|35430                      : TTTCC-ATTTTGAACGAACTG-TCTTTAGTA-TTCCAACCAACAATTGTAAAAC-TCGtaaaccg
gi|35431                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTCAGATCAACACTCG--TAA-ATCACGAa
gi|35432                      : TTTCC-ATTTTAAACGAACAG-CATTCGGTA-TTCCAATCAACCAT
gi|35433                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTAAGATCAACagtaaaccac
gi|35434                      : TTTCC-ATTTTGAACAAACT--CTTTCTGGTATTCCAATCAACCATC--ATAA-ACTGTGAactcgtaaaccacga
gi|35435                      : TTTCC-ATTTTGACCGAACAG-CCTTC--GTATTCCGATCAACAATTG
gi|35436                      : TTTCC-ATGTCGAGCAAACTG-CCTTTAATG-CTCTGATCAATCATCGtaaac
gi|35437                      : TTTCCTATTTTGAACAAACTG-CCTTCGATA-TCCCAATCTGCCA-CGG-TAAtaatccgcga
gi|35439                      : TTTCC-ATTTTGAATGAACTG-C-------C-TTCTGACCAACTATC--ATAA-ACTGTGAaccgcaa
gi|35440                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35441                      : TTGCC-ATTTTCAACGAACTG-CTTTTGGGT-TTCCGATCAATCATCAGGTAACATCGTGA
gi|35443                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35444                      : TTGCC-ATTTCCAACGAACCG-CTTTCGAGT-TTCCGATCAATCATCGTATAACATCGtgaa
gi|35445                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGAcaa
gi|35446                      : TTGCC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAGTCATCCGATAACACCGTGA
gi|35447                      : TTGCC-ATTTTCAACAAACCG-CTTTCAGGT-TTCCGATCAATCATCGGGTAACATCGTGA
gi|35449                      :  TTCC-ATTTTGAATGAACTGACTT--GGGTATTCCGATCAACCATCG--TAA-ACCGCGA
gi|35450                      :  TTCC-ATTTTGAACGAACTA-CCTATGGTA-TTCTGACCAACCATC
gi|35451                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGCGAacaaactgtg
gi|35452                      :    CC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35453                      :    CC-ATTTTTAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35454                      :    CC-ATTTTCAACGAACCG-CTTTCAGAT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35455                      :    CC-GTTTTCAACGAACTG-CTTTCGGGG-TTCCGATCAATCATCGGATAACATCGTGA
gi|35456                      :    CC-ATTTCCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGTATAAC
gi|35457                      :    CC-ATTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35458                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35459                      :    CC-GTTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35460                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAATATCGTGA
gi|35461                      :    CC-ATTTCAAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA


blockSeqs                     :      T     G         G       GTA                A    C
blockSeqs                     :      .     G         A       GTA                T    C
blockSeqs                     :      .     G         .       GTA                G    C
blockSeqs                     :      .     G         .       GTA                G    C
blockSeqs                     :      .     G         .       TA                 G    C
blockSeqs                     :      .     G         .       TA                 T    C
blockSeqs                     :      .     G         .       TA                 G    C
blockSeqs                     :      .     A         .       TA                 G    C
blockSeqs                     :      .     G         .       AA                 G    C
blockSeqs                     :      .     G         .       TT                 G    C
blockSeqs                     :      .     A         .       TA                 G    C
blockSeqs                     :      .     G         .       TA                 G    C
blockSeqs                     :      .     G         .       TA                 G    C
blockSeqs                     :      .     G         .       TA                 G    C
blockSeqs                     :      .     G         .       TA                 T    C
blockSeqs                     :      .     G         .       TG                 G    C
blockSeqs                     :      .     G         .       TA                 G    T
blockSeqs                     :      .     C         .       GT                 G    C
blockSeqs                     :      .     C         .       GT                 G    .
blockSeqs                     :      .     C         .       GT                 .    .
blockSeqs                     :      .     C         .       GT                 .    .
blockSeqs                     :      .     C         .       GT                 .    .
blockSeqs                     :      .     C         .       GT                 .    .
blockSeqs                     :      .     C         .       GT                 .     
blockSeqs                     :      .     G         .       TA                       
blockSeqs                     :      .     G         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     T         .       AT                       
blockSeqs                     :      .     C         .       GG                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     C         .       GT                       
blockSeqs                     :      .     A         .       C                        


blockSeqCons                  : 
originalCons                  : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
finalCons                     : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35438 ): TTTTTATTTTGAACAAACTGCCTTTGTTATCCCCATCAACGATTGTAAACTGTG
Unaligned ( gi|35442 ): TTTCCTAATTTGAACAAAATGTCTTTACTATTCAGATCAACCATTGTAAATCATGA
Unaligned ( gi|35448 ): TTTCTATTTTTTTACGAATTGCCTTCTTTATTCCTATCAACCATTATAAACAGCAA






Alignments
lowQualScore                  :      1     2       0 2       666                3    3       
lowQualScore                  :      .     .       . .       ...                .    .       
lowQualScore                  :      1     4       6 1       555                6    2       
consensus                     : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
Reference ( family-526 )      : TTTCC-ATTTTGAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35421                      : TTTCT-ATTTTGAGCGAACTG-CCTTCGGTA-TTCCGATTAACAATCG--TAA-ACCGCGA
gi|35422                      : TTTCC-ATTTTGAACGAACTG-CCTTCGGTA-TTCTGATCAACCATTG--TAA-ATCATGA
gi|35423                      : TTTCC-CTTTTGAACGAACCG-CCTTCGGTA-TTCCGACCAACCATCG
gi|35424                      : TTTCC-ATTCTGAACGAACTGGCT--CAAGTATTCCGATCAACCATCGtaatccgcga
gi|35425                      : TTTCC-ATTTTGAAAAAACTG-TCTTCTGTA-TTCCGATCAACCATCGtaaactgcga
gi|35426                      : TTTCC-ATTTTGACCGAAATG-CCTTCGGTA-TTCCGATTAACCACCGtaaaccgc
gi|35427                      : TTCCC-ATTTTGAACAAACTG-CCCTCAGAA-GTCCGATCAACCATCGAA-AAC--CGCGAtaaactgcga
gi|35428                      : TTTTT-ATTTTGAACGAACTA-CCTCCAGTT-ATCCGATCAACCATCG
gi|35429                      : TTTCC-ATTTTAAATTAACTG-CTTTCTGTA-TTCCGATCAACCATCGtgaaccgcga
gi|35430                      : TTTCC-ATTTTGAACGAACTG-TCTTTAGTA-TTCCAACCAACAATTGTAAAAC-TCGtaaaccg
gi|35431                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTCAGATCAACACTCG--TAA-ATCACGAa
gi|35432                      : TTTCC-ATTTTAAACGAACAG-CATTCGGTA-TTCCAATCAACCAT
gi|35433                      : TTTCT-ATTTTGAAAGAACTG-CCTTCGGTA-TTAAGATCAACagtaaaccac
gi|35434                      : TTTCC-ATTTTGAACAAACT--CTTTCTGGTATTCCAATCAACCATC--ATAA-ACTGTGAactcgtaaaccacga
gi|35435                      : TTTCC-ATTTTGACCGAACAG-CCTTC--GTATTCCGATCAACAATTG
gi|35436                      : TTTCC-ATGTCGAGCAAACTG-CCTTTAATG-CTCTGATCAATCATCGtaaac
gi|35437                      : TTTCCTATTTTGAACAAACTG-CCTTCGATA-TCCCAATCTGCCA-CGG-TAAtaatccgcga
gi|35439                      : TTTCC-ATTTTGAATGAACTG-C-------C-TTCTGACCAACTATC--ATAA-ACTGTGAaccgcaa
gi|35440                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAACCATCGGATAACATCGTGA
gi|35441                      : TTGCC-ATTTTCAACGAACTG-CTTTTGGGT-TTCCGATCAATCATCAGGTAACATCGTGA
gi|35443                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35444                      : TTGCC-ATTTCCAACGAACCG-CTTTCGAGT-TTCCGATCAATCATCGTATAACATCGtgaa
gi|35445                      : TTGCC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGAcaa
gi|35446                      : TTGCC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAGTCATCCGATAACACCGTGA
gi|35447                      : TTGCC-ATTTTCAACAAACCG-CTTTCAGGT-TTCCGATCAATCATCGGGTAACATCGTGA
gi|35449                      :  TTCC-ATTTTGAATGAACTGACTT--GGGTATTCCGATCAACCATCG--TAA-ACCGCGA
gi|35450                      :  TTCC-ATTTTGAACGAACTA-CCTATGGTA-TTCTGACCAACCATC
gi|35451                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGCGAacaaactgtg
gi|35452                      :    CC-ATTTTCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35453                      :    CC-ATTTTTAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35454                      :    CC-ATTTTCAACGAACCG-CTTTCAGAT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35455                      :    CC-GTTTTCAACGAACTG-CTTTCGGGG-TTCCGATCAATCATCGGATAACATCGTGA
gi|35456                      :    CC-ATTTCCAACGAACCG-CTTTCAGGT-TTCCGATCAATCATCGTATAAC
gi|35457                      :    CC-ATTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCG
gi|35458                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35459                      :    CC-GTTTTCAACGAACTG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
gi|35460                      :    CC-ATTTTCAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAATATCGTGA
gi|35461                      :    CC-ATTTCAAACGAACCG-CTTTCGGGT-TTCCGATCAATCATCGGATAACATCGTGA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35438 ): TTTTTATTTTGAACAAACTGCCTTTGTTATCCCCATCAACGATTGTAAACTGTG
Unaligned ( gi|35442 ): TTTCCTAATTTGAACAAAATGTCTTTACTATTCAGATCAACCATTGTAAATCATGA
Unaligned ( gi|35448 ): TTTCTATTTTTTTACGAATTGCCTTCTTTATTCCTATCAACCATTATAAACAGCAA