lowQualScore : 11111111111111 2222 22222222222222222222222222222222222222222222222222222222222222222222222 1111 1111111 1 111111111111 11111111111111111 1
lowQualScore : 0 0 00000000000000 11 3333333333333 3333333333 0 0 5555 2 999 0 2 0 55555555555555555555555555555555555555555555555555555555555555555555555 555555 4444 222 0000 0 0 2 555 22 6666 1 888 1 5555555 1 77 4 1 666666666666 1 222 88888888888888888 777777 8 1 11 444 2 88 2222 5 5 5 3
lowQualScore : . . .............. .. ............. .......... . . .... . ... . . . ....................................................................... ...... .... ... .... . . . ... .. .... . ... . ....... . .. . . ............ . ... ................. ...... . . .. ... . .. .... . . . .
lowQualScore : 9 9 55555555555555 66 3333333333333 0000000000 6 6 4444 3 666 6 8 5 88888888888888888888888888888888888888888888888888888888888888888888888 000000 1111 555 3333 8 9 8 000 55 4444 8 111 8 4444444 9 33 3 7 777777777777 4 555 44444444444444444 888888 2 2 99 999 7 22 7777 0 2 7 1
consensus : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-G-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------N---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GTT-A-T-T-AA----TGA-CCCAC-CCACACGTGAAAAATT-GACC----------CTC-G---TTAAAATCTGATCA-----CNAA---CA---GTTGGAAACTGAC-----CGAATAGT--CGG--C-C--GGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Reference ( gi|77402 ) : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCCTAT-G-G-A-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------C---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GTT-A-T-T-AA----TGA-CCCAC-TCACACGTGAAAAAAT-GACC----------TTC-G---TTAAAATCTGATCA-----CAAA---CA---GTTGGAAACTGAC-----TGAATAAT--CGA--C-C--GGACCACATTTCAA----CATTGAAAACTGCTGTAATAAATTTGGATGTTCTCATGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77404 : GTAACATAAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-T-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------C---A------T------TGTT-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GTT-T-T-TTAA----TGA-CCCAC-CAACATGTGAAAAATT-GACC----------ATC-G---TTAAAATCTGATCA-----TCAA---CA---GTTGGAAACTGAC-----CAAATAGT--CGA--C-A--GGAACACATTTCAA----CATTGAAAACTGCTATTATAAATTTCGATGTTCTCGTGGATATAAAGTGTTAATTATAACCAGAAAATGTTGGTATACGA-TATA
gi|77405 : GCAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCTCAT-G-G-G-TC-ACTTTTCATC-G--G------------ATA----AG----T------GA------TT--------C---A------T------TTTT-----AA----T---A----C-TGAAAG-ACGACCC-C---G--AC----C-GTT-A-T-TTAA----TGA-CCCAC-CCACACGTGAAAAATT-TACC----------GTC-G---TTAAAATCTTATCA-----CCGA---CA---GTTGGAAACTGAC-----CGAATAGT--CAG--C-C--GGACCACATTTCAA----CATTGAAAAATGCTATCATAAATTTGGATGTTCTCGTGGATGTAAAGTGTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77403 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-G-TC-AC-TTTCAAC-A--G------------ATG----AG----T------GA------TC--------A---A------C------TTTT-----AA----C---A----C-TGAAAA-CTGACCC-C---G--AC----T-GTT-ATT-T-AA----TGA-ACCAC-CCACACGTGAAAAATT-GACC----------CTC-G---TTAAAATCTGATCA-----CCAA---CA---GTTTGAAACTGAC-----CGAATTGT--CGG--C-C--AGACCACATTTCAA----CATTGATAACTGCTATTATATATTTGGATGTTCTCGTGGATGTAAAGTGTGAAATATAACCGGAAAATGTTGACATACGA-TATA
gi|77407 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TA-A-CCCAAT-G-G-G-TC-ACTTTTCAAC-G--G------------ATG----AG----A------GA------TA--------T---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGATCC-C---G--AC----C-GTT-A-T-TTAA----TGA-CCTAC-CCACACGTGAAAAATT-GACC----------CTC-G---ATAATATCTGATCA-----CCAA---CA---GTTGAAAACTGAC-----CGAATAGT--CGG--C-C--GAATCACATTTCAA----CATTGAAAACTACTATTATAATTTTGGATGTTCTCGTGAATATAAAGTGTGAATTATTACTGGAATATGTTGGTATACGA-TATA
gi|77411 : GTAACATTAA-AT-TTTGACC--------------C--T-------------GTTAACAT-A--------TG-A-ACCAAT-G-C-G-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------C---A------T------TTTT-----AA----C---A----T-TGAAAAACTGACCC-C---C--AC----C-GTT-A-T-TTAA----TGA-CCCAC-CCACACGTGAAAAATT-TACC----------CTT-C---TCAAAACCTGATCA-----CCAA---CA---GTTGGAAACTGAC-----CGAATAGT--CGG--C-C--AGACCACATTTCAA----CATTGAAAACTGCTATTATGAATTTGGATGATCTCGTGGATATAAAGTGTCAATTAAAACCGGAAAATGTTTGTTTACGA-TATA
gi|77413 : GTAACATTTA-AT-TTTAACC--------------C--T-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-G-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------C---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GTT-ATT-T-CA----TGA-CCCAT-CCACACGTGAAAAATT-GACC----------CTC-G---TTAAAATCTGATCA-----CCTG---CA---GTTGGAAAGTAAC-----CGAATAGT--CGG--C-C--GGACCACATTACAA----CATAGTAAACTGCTATTATAAATTTGGATGTTCTTGCGAAT-T--------AATTATAACCGAAAAATGTTGATATACGA-TATA
gi|77409 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTAAAAA-A--------TG-A-TCCCAT-G-G-G-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------A---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGACCC-C---A--AC----A-GTT-ATT-T-AA----TGA-TCCAC-CCACACGTGAAAAATT-GACC----------CTC-G---TCAAAATCTGATCA------A-------------------TAAC-----CGAATAGA--CGG--C-C--GGACCACATTTCAA----TATTGAAAACTTATATTATAAATTTGGATGTTCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77414 : GTAACATTAA-AT-TTTTACC--------------C--C-------------GTTGAAAA----------------------------------TTTCAAC-G--G------------ATG----AG----T------GA------TC--------A---A------T------TTTT-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GTT-A-T-T-AAA---TGA-CCCAT-CCACACGTGAAAAAATTGACC----------TTTTG---TTAAAATCTGATCA-----CCAA---CA---GTTGGTAACTGAC-----CAAATAAA--CGG--C-C--GGACCACATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGATCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77412 : GTAACATTAA-AT-TTTAACC--------------C--C-------------ATT-AAAA-A--------TG-A-CGCCAT-G-G-G-TC-ACTTTTCAAC-G--G------------ATT----AG----T------GA------TC--------A---A------T------TTTC-----AA----C---A----T-TGAAAA-CTGACCC-T---G--GT----C-GTT-A-T-TTAA----TGA-CCCAC-CCACACGTGTAAAATT-GATC----------CTC-G---TTAAAATCTGATCA-----CCAA---CA---GTTTGAAACTGAC-----CGAATGGT--CGG--C-C--GGACCACATTTCAA----TATTGAAAACTTATATTATTAATGTGGATGTTCTCTTGGATTAAAAGTGTGAATTATAACTGGGAAATGTTGGTTTACGA-TA
gi|77417 : GTAATATTTA-AT-TTTG-CC--------------C--C-------------GTTGAATA----------TG-A-CCACAT-G-A-G-TC-ACATTATAAC-G--G------------ATA----AG----T------GA------TC--------C---A------T------TTTT-----TT----C---A----T-TGAAAA-CTGATCC-C---G--AC----C-GTT-T-T-TTAA----TGA-CCCAC-CTACACGTGAAAAGTT-GACC----------CTC-G---TTGAAATCTGATCA-----CCAA---CA---ATTTGAATCTGAC-----CGAACAGT--CGG--C-C--GGACAACTTTTCAA----GATTGAAAACTGCTATAATAAATTCGGATGTTCTCGTG
gi|77419 : GTAACATTAA-AT-TTTGACC--------------C--G-------------GTTGAAAA-A--------TG-A-TCTCGT-G-T-G-TC-ACTTTTCAAC-G--G------------ATG----GG----T------GA------TC--------C---A------T------TTTT-----AA----C---A----T-TAAAAA-ATGACCC-C---G--AC----C-GTT-A-TAT-AA----AGA-CCCAT-CCACACGTGAAAAATT-GACG----------CTC-G---TTAAAACCTGATCA-----TCAA---CA---GTTGGAAACTGAC-----CAAATAGT--CGG--C-C--ATATCAT-TTTTAATAGTCATCGAAA
gi|77435 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-G-TC-AC-TTTCAAC-A--G------------ATG----AG----T------GA------TC--------A---A------C------TTTT-----AA----
gi|77438 : GTAACATTTA-AT-TTTAACC--------------C--T-------------GTTGAAAA-A--------TG-A-CCCCAT-G-G-G-TC-ACTTTTCAAC-G--G------------aggaccacattttaacattgaaaactg
gi|77406 : GTAACATTAA-AT-TTTGATC--------------C--T-------------GTTGAAAA-A--------TG-A-CCCCAA-G-G-G-TC-ACATTTCAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AATAGTC---G----T-TGAAAA-CTGATCaccggcaaccgacc
gi|77423 : GTGACATCAA-AT-TTTGACC--------------C--A-------------GTTGAAAA-A--------TG-A-CCCCAA-A-G-A-TC-ATTTTTCAAT-GTTG------------AAA----AT----T------GACCCGGGTC--------C---C------A------TTTC-----AA----C---A----T-TAAATT-CTGATCA-A---A--AC----A-GTC-G-T-T-GAAAACTGA-CC
gi|77408 : GTAACATTAA-AT-TTTAACC--------------C--C-------------GTTGAAAT-A--------TG-A-CACCAA-G-G-G-TC-ATTTTTCAAT-GTTG------------AAA----AT----T------GA------CC--------C---G------TGTCATATTTC-----AA----T---A----T-TAAATT-CTGATC
gi|77420 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TT-A-CCCCAA-G-G-G-TCAACTTT---------G------------A----------------------------------------------------------C-----AA----C---T----T-TGAAAA-TTGACCCGC---GTCACATTTC-GAC-A-T-T-AAATTCTGA-TCGAA-ACAGTCGTTAAAAACT-GATC----------AGT-G---TTAAATTTTGATCA-----aaaacagtcgttgaa
gi|77422 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-T--------TG-A-ACCCAA-G-G-G-TC-ATTTTTCAAT-GTTG------------AAA----AT----T------GACACGGGTCA-------C---A-------------TTTA-----AA----C---A----T-TAAATT-CTGATC
gi|77421 : GTAACATTAA-AT-ATTGACC--------------C--C-------------GTTGAAAA-A--------TGAA-CCC----G-G-G-TC-ACATTTCAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AA----C---AGTCGT-TGAAAA-CTGATCaaaacagtcgttgaa
gi|77424 : GTTACATTAA-AT-TTTGACC--------------C--C-------------GTTAAAAA-A--------TG-A-ACCCAC-G-G-G-TC-ATTTTTCAAT-G--
gi|77425 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTAAAAA-A--------TG-A-ACTCAA-G-G-G-TC-ATTTTTCAAT-ATTG------------AAA----AT----T------GACACGGGTCA-------C---A-------------TTTC-----AA----C---A----T-TAAA
gi|77427 : GTAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAATA-A--------TG-ATCCCAAT-G-G---TC-ATTTTTCGAT-G--
gi|77428 : GTAACATTAA-AC-TTTGACC--------------C--C-------------GTTGAATA-A--------TG-A-CCCGAA-G-T-G-TC-ATTTTACAAT-GTTG------------AAA----AT----T------GA------TC--------CGG-G------TCACA--TTTC-----AA----C---A----T-TAAGTT-CTGATCttgaaaatttacccgggtcacatttcaacgttaaatcctgatcaaaacagtcgttgaa
gi|77410 : GTAACATGAA-AT-TTTGAAC--------------T--C-------------GTTAAAAA-A--------TG-A-ACTCAA-G-G-G-TC-ATTTTTCAAT-GTTG------------AAA----AT----T------GA------CC--------CGG-G------TCACA--TTTC-----AA----C---A----T-TAAATT-CTGATCagaacagtcgttgaa
gi|77429 : GTAACATTAA-AT-TTTGACCCCGTTGAAAATAGAC--C-------------GTTGAAAA-A--------AG-A-CCCCAA-G-G-G-TC-ATTTTTCAAT-GT-T------------AAA----AT----T------GA------CC--------CGG-G------TCACA--TTTC-----AA----C---A----T-TAAATT-CTGATCaaaacagtcgttgaa
gi|77430 : GTAAAATTAA-AT-TTTGACC--------------C----------------GTTGAATA-A--------TG-A-CGCCAA-G-G-G-TC-ACATTTCAAC-aaaacagtcgttgaa
gi|77416 : GTAACATTAA-AT-TTTGACA--------------C--C-------------GTTG-AAA-T--------TG-A-C---AC-G-G-G-TC-AAATTTCAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AA----C---AGTCGT-TGAAAA-CTGATCattaaattctgaccaaaaaagccgtcgaaaactgatc
gi|77431 : GTAACACTAA-AT-TTATACC--------------C--C-------------GTTGAAAA-T--------TG-A-CCC----A-G-G-TC-ACATTTCAAC-----------------ATT----AAATTCT------GA------T---------C---A----------------------AA----C---AGCC-TATGAAAA-CTGATCattgttaaat
gi|77426 : GTAACATTAA-AT-TCTGACC--------------C--C-------------GTTGAAAA-A--------TA-A-Cattgttaaat
gi|77432 : GTAACATTAA-AT-TTTGATC--------------C--C-------------ATTAAGAA-T--------TG-A-ACC----G-G-G-TC-AGATTTCAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AATAT-C---G----T-TGAAAA-CTGATC
gi|77415 : GCAACATTAA-AT-ATTGACC--------------CAAT-------------GTTGAAAA-T--------TT-A-CCC----G-G-G-TC-ACATTTCAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AA----C---AGTCGT-TGAAAA-CTAATC
gi|77433 : GTAACAC----ATATTTGACC--------------C--T-------------GTTGGAAA-T--------TG-A-CCC----G-G-G-TC-ATATTTCAAC-A--T-------------TG----AATTC-T------GA------TC--------A---A----------------------AA----C---AAGCGT-TGAAAA-CCGATCagtgttaaat
gi|77418 : GTAACATTAA-AT-TTTGACC--------------C--CGGAAAAAAATGGGGTCGAAAA-T--------TG-A-A---AC-G-G-G-TC-ACGTTTTAAC-----------------ATT----AAATTCT------GA------TC--------A---A----------------------AA----C---AGTCGT-TGAAAA-CTGATC
gi|77409 : AATGTTAA-AA-ATTGATCACTCAT--------C--C-------------GTTGAAAA-G--------TG-A-CCC-ATGG-G-A-TC-ATTTTTTAAC-G--G------------
gi|77437 : gtaacattaaattttgaccAACATTAA-AT-TTTGACC--------------C--C-------------GTTGAAAA-A--------TA-A-CCCAAT-G-G-G-TC-ACTTTTCAAC-G--G------------gaaaactgaccccaacagttatttaatgatccacccacacgtgaaaaattgaccctcgtcaaaatctgatcaataaccgaatagacggccggaccacatttcaatattgaaaacttatattataaatttggatgttctcgtggataaaaagagtgaattataaccggaaaatgttggtatacgatata
gi|77434 : AACATTTA-AT-TTTGACC--------------C--C-------------GTTGAAAATACTAAAAATTG-A-CCC----G-G-A-TC-ACATTTCAAC-
gi|77403 : TTAA-AA-GTTGATCACTCAT--------C--T-------------GTTGAAAG----------TG-A-CCC-AT-G-G-GGTC-ATTTTTCAAC-G--G------------
gi|77435 : gtaacattaaattttgaccTTAA-AA-GTTGATCACTCAT--------C--T-------------GTTGAAAG----------TG-A-CCC-AT-G-G-GGTC-ATTTTTCAAC-G--GGGTCAAAATTTAATGTTACAG-----------GA------CCA-------C---A-------------TTTT-----AA----C---A----T-TGAAAA-CTGcactgaaaactgaccccgactgttatttaatgaaccacccacacgtgaaaaattgaccctcgttaaaatctgatcaccaacagtttgaaactgaccgaattgtcggccagaccacatttcaacattgataactgctattatatatttggatgttctcgtggatgtaaagtgtgaaatataaccggaaaatgttgacatacgatata
gi|77436 : TAATAT-TTTGACC--------------C--T-------------GTTGAATA-A--------TG-A-CCCCAT-G-G-G-TC-ACTTTTCACC-G--A------------ATG----AG----T------GA------TC--------A---A------A------TTTT-----AA----C---A----T-TGAAAA-TTTATCC-C---T--AC----C-GTT-A-T-T-AAA---TGA-CCCAC-CCACACGTGAAAATTT-GACC----------CTC-G---TTAAAAT-TGATCA-----CAA----TA---GTTGGAAACTGAC-----AGAATAGT--CAG--C-C--GGACGAGATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGTTCTTATGGATAAAAAGTGAGAATTATAACCGGAAAATGTTGGTATGCGA-CATA
gi|77427 : TAA-AT-TTT--CA--------------A--C-------------ATCGAAAA-A--------TG-A-CCATTG-G-G-A-TC-ATTATTCAAC-G--G------------
gi|77423 : gtaacattaaattttgaccA-AT-TTT--CA--------------A--C-------------ATTGAAAA-A--------TG-A-TCTTTG-G-G-G-TC-ATTTTTCAAC-cccgggtcacatttcaacgttaaatcctgatcaaaacagtcgttgaa
gi|77408 : gtgacatcaaattttgacccaA-AT-TTT--CA--------------A--C-------------ATTGAAAA-A--------TG-A-CCCT-T-G-GTG-TC-ATATTTCAAC-G--G------------gacccgggtcccatttcaacattaaattctgatcaaaacagtcgttgaaaactgacc
gi|77422 : gtaacattaaattttaaccA-AT-TTT--CA--------------A--C-------------ATTGAAAA-A--------TG-A-CCCT-T-G-G-GTTC-AATTTTCAAC-G--G------------gacccgtgtcatatttcaatattaaattctgatcaaaacagtcgttgaa
gi|77428 : gtaacattaaattttgaccA-AT-TTT--CA--------------A--C-------------ATTGTAAA-A--------TG-A-CACTTC-G-G-G-TC-ATTATTCAAC-G--G------------gacacgggtcacatttaaacattaaattctgatcaaaacagtcgttgaa
gi|77410 : gtaacattaaactttgaccA-AT-TTT--CA--------------A--C-------------ATTGAAAA-A--------TG-A-CCCT-T-GAG-T-TC-ATTTTTTAAC-G--gatccgggtcacatttcaacattaagttctgatcagaacagtcgttgaa
gi|77429 : gtaacatgaaattttgaactA-AT-TTTAAC--------------------------------ATTGAAAA-A--------TG-A-CCCTTG-G-G-G-TC-TTTTTTCAAC-G--G----------------------------------------TC--------T---A------T------TTTC-----AA----C---gacccgggtcacatttcaacattaaattctgatcaaaacagtcgttgaa
gi|77442 : gtaacattaaattttgaccccTTGACC--------------CT-C-------------GTT--AAA-A--------T------CT-----G-A-TC-AC----CAAC-A--G------------TTGGAATAG----TCGGCCGGA------CCA-------C---A------T------TTC------AA----C---A----T-TGAAAA-CTGgacccgggtcacatttcaacattaaattctgatcaaaacagtcgttgaa
gi|77404 : atttttgttagatcatcaaatattgacccccgaccgttatttaataacccacccacacgtgaaaaa--------------C--C-------------GTTGAAAA-G--------TG-A-ACC-AT-G-G-GGTC-ATTTTTCAAC-G--G------------ctattataaatttggatgtactcgtggatgtaaagtgaattataaccggaaaatgttgatatacgatata
gi|77405 : gtaacataaaattttgacc--------------C--C-------------GATGAAAA-G--------TG-A-CCC-AT-GAG-G-TC-ATTTTTCAAC-G--G------------atgagtgatccattgttaacattgaaaactgaccccgaccgttttttaatgacccaccaacatgtgaaaaattgaccatcgttaaaatctgatcatcaacagttggaaactgaccaaatagtcgacaggaacacatttcaacattgaaaactgctattataaatttcgatgttctcgtggatataaagtgttaattataaccagaaaatgttggtatacgatata
gi|77407 : gcaacattaaattttgacc--------------C--C-------------GTTGAAAA-G--------TG-A-CCCATT-G-G-G-TT-ATTTTTCAAC-G--G------------ataagtgattcatttttaatactgaaagacgaccccgaccgttatttaatgacccacccacacgtgaaaaatttaccgtcgttaaaatcttatcaccgacagttggaaactgaccgaatagtcagccggaccacatttcaacattgaaaaatgctatcataaatttggatgttctcgtggatgtaaagtgtgaattataaccggaaaatgttgatatacgatata
gi|77413 : gtaacattaaattttgacc--------------C--C-------------GTTGAAAA-G--------TG-A-CCC-ATGG-G-G-TC-ATTTTTCAAC-A--G------------atgagagatatatttttaacattgaaaactgatcccgaccgttatttaatgacctacccacacgtgaaaaattgaccctcgataatatctgatcaccaacagttgaaaactgaccgaatagtcggccgaatcacatttcaacattgaaaactactattataattttggatgttctcgtgaatataaagtgtgaattattactggaatatgttggtatacgatata
gi|77412 : gtaacatttaattttaacc--------------C--C-------------GTTGAAAA-G--------TG-A-CCC-AT-G-GCG-TC-A-TTTTTAAT-G--G------------atgagtgatccatttttaacattgaaaactgaccccgaccgttatttcatgacccatccacacgtgaaaaattgaccctcgttaaaatctgatcacctgcagttggaaagtaaccgaatagtcggccggaccacattacaacatagtaaactgctattataaatttggatgttcttgcgaattaattataaccgaaaaatgttgatatacgatata
gi|77419 : gtaacattaaattttaacc--------------C--C-------------GTTGAAAA-G--------TG-A-CAC-AC-GAG-A-TC-ATTTTTCAAC-attagtgatcaattttcaacattgaaaactgaccctggtcgttatttaatgacccacccacacgtgtaaaattgatcctcgttaaaatctgatcaccaacagtttgaaactgaccgaatggtcggccggaccacatttcaatattgaaaacttatattattaatgtggatgttctcttggattaaaagtgtgaattataactgggaaatgttggtttacgata
gi|77437 : gtaacattaaattttgacccg--------------C--C-------------GTTGAAAA-G--------TG-A-CCCATT-G-G-G-TT-ATTTTTCAAC-G--G------------atgggtgatccatttttaacattaaaaaatgaccccgaccgttatataaagacccatccacacgtgaaaaattgacgctcgttaaaacctgatcatcaacagttggaaactgaccaaatagtcggccatatcatttttaatagtcatcgaaa
gi|77438 : --------------C--C-------------GTTGAAAA-G--------TG-A-CCC-ATGG-G-G-TC-ATTTTTCAAC-A--G------------ggtcaaaatttaatgtt
gi|77412 : --C-------------ATTAAATA-A--------CG-A-CC--A--G-G-G-TC-AGTTTTCAAT-GTTG------------AAA----AT----T------GA------TC------------A------C------T--------AATC--C---G----T-TGAAAA-GTGACCCAT---G--GCGT--C-ATT-T-T-T-AA----TGggttaaaattaaatgttacaccggcaaccgacc
gi|77424 : gtaacattaaattttaaccc--C-------------ATTGAAAA-A--------TG-A-CCC-GT-G-G-GTTC-ATTTTTTAAC-G--G------------acccacccacacgtgtaaaattgatcctcgttaaaatctgatcaccaacagtttgaaactgaccgaatggtcggccggaccacatttcaatattgaaaacttatattattaatgtggatgttctcttggattaaaagtgtgaattataactgggaaatgttggtttacgata
gi|77427 : gttacattaaattttgacc--C-------------GTTGAAAT-G--------TG-A-CCC----G-G-G-TA-AATTTTCAAC-ATCG------------AAA----AA----T------GA-------C--------C---A------T------T
gi|77406 : gtaacattaaattttgaccccgttgaataatgatccc-------------GTTGAAAT-G--------TG-A-CCCTTG-G-G-G-TC-ATTTTTCAACAG--G------------ATttaaatcctgatcaaaacagtcgttgaa
gi|77423 : gtaacattaaattttg-------------GTTGAAAT-G--------GG-A-CCC----G-G-G-TC-AATTTTCAAC-ATTG------------AAA----AA----T------GA------TCTTTGGGGTC---A------T------TTTTC----AA----C---attaaattctgatcaaaatagtcgttgaaaactgatc
gi|77421 : gtgacatcaaattttgaccca-------------GTTGAAAT-G--------TG-A-CCCG---G-G-T-TC-ATTTTTCAAC-G--G--------------------------------GG------TC--------A---A------T------ATTT-----AA----T---G----T-Tattaaattctgatcaaaacagtcgttgaaaactgacc
gi|77428 : gt-------------GTTGAAAT-G--------TG-A-CCC----G-G-A-TC-AATTTTCAAC-attaaattctgatcaaaacagtcgttgaaaactgatc
gi|77410 : gtaacattaaactttgaccccgttgaataatgacccgaagtgtcattttacaat-------------GTTGAAAT-G--------TG-A-CCC----G-G-G-TC-AATTTTCAAC-ATTG------------AAA----AA----T------GA------CC--------CTTGAGTTCATT------TTTT-----AA----CGA-G----T-TCAAAA-TTattaagttctgatcagaacagtcgttgaa
gi|77430 : gtaacatga-------------GTTGAAAT-G--------TG-A-CCCT-T-G-GCG-TC-ATTATTCAAC-G--G------------GTattaaattctgatcaaaacagtcgttgaa
gi|77431 : gtaaaattaaattttg-------------GTTGAAAT-G--------TG-A-CC---T-G-G-G-TC-AATTTTCAAC-G--G------------attaaattctgaccaaaaaagccgtcgaaaactgatc
gi|77433 : gtaacactaaatttatacc-------------GTTGAAAT-A--------TG-A-CCC----G-G-G-TC-AATTTCCAAC-A--G------------attaaattctgatcaaacagcctatgaaaactgatcattgttaaat
gi|77408 : gtaacacatatttgaccTTGAAAT-A--------TG-A-C---AC-G-G-G-TC-AATTTTCAAC-ATTG------------AAA----AA----T------GA------CC--------C---attgaattctgatcaaaacaagcgttgaaaaccgatc
gi|77425 : gtaacattaaattttaaccccgttgaaatatgacaccaaTTGAAAA-A--------TG-A-CCCT-T-GAG-T-TC-ATTTTTTAAC-G--G------------tattaaattctgatcaaaacagtcgttgaa
gi|77421 : gtaacattaaattttgacc-G-A-TC-AGTTTTCAAC-G--A------------CTGT---TT----T------GA------TC--------A---G------A------ATTT-----AA----T---G----T-TGAAAT-GTGACCC-tattgaaaattgacacgggtcacatttcaacattaaa
gi|77416 : gtaacattaaatattgaccccgttgaaaaatgaaccc-G-A-TC-AGTTTTCAAC-G--A------------CTGT---TT----T------GA------TC--------A---G------A------ATTT-----AA----T---G----T-TGAAAT-TTGACCC-
gi|77432 : gtaacattaaattttgacaccgttgaaattgacac-G-A-TC-AGTTTTCAAC-G--AT-----------ATT-----T----T------GA------TC--------A---G------A------ATTT-----AA----T---G----T-TGAAAT-CTGACCC-G---G--TT----CAATT-C-T-T-AA----TGattgttaaat
gi|77439 : gtaacattaaattttgatcc-TC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TG--------C---A------T------TTT------AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-GGT-T-T-T-AA----TGA-CCCAC-CCATACGTGAAAAATT-GATC----------------------------ATCA-----CCAA---CA---ATTGGAAACTGAC-----CGAATAGT--CGG--C-C--GGACCACATTTCAA----CTTTGATAACTGCTATTATAAATTTGGGTGTTCTCGTTGATATGAACTGT
gi|77440 : gC-ACTTTTCAAC-G--G------------ATG----AG----T------GA------TC--------A---AA-----T------TTTT-----AA----C---A----T-TGAAAA-CTGACGC-C---A--AC----C-----------------------CAC-TCTCACGTGAAAAATT-GATC----------CTC-G---TTAAAATCTGACCA-----CCAA---CA---GTTGGAAACTGGC-----CGAATAGT--CGG--C-C--GGATCACATTTCAA----CACTAAAAACTTATGTTATAAATTCGGA
gi|77441 : TTTTGAAC-G--G------------ATG----AA----T------GA------TC--------A---A------T------TGTA-----AA----C---A----T-TGAAAA-CTGACCC-C---G--AC----C-TTT-A-T-TTGA----TGA-CCCAC-ACACACTTTAAAAATT-GACA----------CCC-G---TTGAAATCTG----------------------TTGGAAACTGAC-----CGTAAAGT--CGG--C-C--AGGCCACATTTCAA----CATTGAAAAC--ATATTATAAATTTTGATGTTCTCGTGGATATAAAGTGAGAATTATAACCGGAAAATGTTGGTATA-GATTATA
gi|77422 : G----T------G-------TC--------A---A------T------TTTC-----AA----C---A----T-TGAAAA-ATGACCC-
gi|77425 : gtaacattaaattttgaccccgttgaaaattgaacccaaG----T------G-------TC--------A---A------T------TTTC-----AA----T---A----T-TGAAAA-ATGACCC-gggtcacatttaaacattaaattctgatcaaaacagtcgttgaa
gi|77423 : gtaacattaaattttgaccccgttaaaaaatgaactcaa------GG------TC--------A---A------T------TTTC-----AA----C---A----T-TGAAAA-ATGATCgggtcacatttcaacattaaa
gi|77408 : gtgacatcaaattttgacccagttgaaaaatgaccccaaa------GG------TC--------A---A------T------TTTC-----AA----C---A----T-TGAAAA-ATGACCC-cgggtcccatttcaacattaaattctgatcaaaacagtcgttgaaaactgacc
gi|77410 : gtaacattaaattttaaccccgttgaaatatgacaccaa------GG------TC--------A---A------T------TTTC-----AA----C---A----T-TGAAAA-ATGACCC-cgtgtcatatttcaatattaaattctgatcaaaacagtcgttgaa
gi|77423 : gtaacatgaaattttgaactcgttaaaaaatgaactcaaA------TC--------A---A------A------TTTT-----GA----CCCAG----T-TGAAAA-ATGACCC-CAAAG--AT----C-ATT---T-T-----------------TCA-ATGTTGAAAATT-GACCCGGGTCCCATTTC-AACATTAAATTCTGATCA------AAA---CAGTCGTTGAAAACTGAC-----cgggtcacatttcaacattaaattctgatcaaaacagtcgttgaa
gi|77429 : gtgac--------C---A------A------TTTT-----AA----C---A----T-TGAAAA-ATGACCC-c
gi|77442 : gtaacattaaattttgaccccgttgaaaatagaccgttgaaaaaagaccccaa---A------T------TTTTGTTAGAT----C---A----T-CAAATA-TTGACCC-CC--G--AC----C-GTT-A-T-TTAA----TAA-CCCAC-CCACACGTGAAAAATT-GACC----------CTC-G---TTAAAATCTGATCA-----CCAA---CA---GTTGGAA---------------TAGT--CGG--C-C--GGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTACTCGTGGATGTAAA--GTGAATTATAACCGGAAAATGTTGATATACGA-TATAacccgggtcacatttcaacattaaattctgatcaaaacagtcgttgaa
gi|77421 : T-----AA----C---A----T-TAAATA-TTGACCC-C---G-----------TTGA-A-A-AA----TGAACCCGGGTCACATTTCAA----------------------C-A---TTAAATTCTGATCA------AAA---CAGTCGTTGAAAACTGA
gi|77423 : g----TGA-CCCA--------GTTGAAAAAT-GACC----------CC---------AAA---GATCATTTTTCAAT--------GTTGAAAATTGAC--------------------C-C--GGGTCCCATTTCAA----CATTAAAtc
gi|77410 : gtgacatcaaatttACATGAAATTTT-GAAC----------T-C-G---TTAAAAAATGAACT-----CAAGGGTCA---TTTTTCAA-TG-T-----TGAA-AAT--TGA--C-CC-GGGTCACATTTCAA----CATTAAAttctgatcaaaacagtcgttgaaaactgacc
gi|77422 : gtaT-GACC----------C-C-G---TTGAAAATTGAACC-----CAAGGGTCA---TTTTTCAA-TG-T-----TGAA-AAT--TGA--CAC--GGGTCACATTTAAA----CATTAAAttctgatcaaaacagtcgttgaa
gi|77425 : gtaacattaaatttT-GACC----------C-C-G---TTAAAAAATGAACT-----CAAGGGTCA---TTTTTCAAT--AT-----TGAA-AAT--TGA--CAC--GGGTCACATTTCAA----CATTAAAttctgatcaaaacagtcgttgaa
gi|77406 : gtaacattaaatttC-A---TTAAATTTTGATC-------------CT---GTTGAAAAATGAC-----C------C--CAA-------GGGTCACATTTCAA----CATTAAA
gi|77416 : gtaaC-A---TTAAATTCTGATCA------AAA---CAGTCGTTGAAAACTGAttctgatcaaaatagtcgttgaaaactgatc
gi|77432 : gtaacattaaattttgacaccgttgaaattgacacgggtcaaatttcaaC-A---TTAAATTCTGATCA------AAA---TATC-GTTGAAAACTGAtcattgttaaat
gi|77415 : gtaacattaaattttgatcccattaagaattgaaccgggtcagatttcaaC-A---TTAAATTCTGATCA------AAA---CAGTCGTTGAAAACTAAtc
gi|77418 : gcaacattaaatattgacccaatgttgaaaatttacccgggtcacatttcaaC-A---TTAAATTCTGATCA------AAA---CAGTCGTTGAAAACTGAtcagtgttaaat
gi|77421 : gtaacattaaattttgaccccggaaaaaaatggggtcgaaaattgaaacgggtcacgttttaaAA---CA----TTAAATATTGACCCCGTTGAAAAAT---GAACC-C--GGGTCACATTTCAA----CATTAAAtc
gi|77434 : gt---GTTGAAAAT--AC-----TAAA-AAT--TGA--C-CC-GGATCACATTTCAA----Cttctgatcaaaacagtcgttgaaaactgatc
gi|77433 : aacatttaattttgacccc---GTTGGAAATTGAC--------------------C-C--GGGTCATATTTCAA----CATTGAA
gi|77428 : gtaacacatatttgaccct-----TGAA-AAT--TGAT-C-C--GGGTCACATTTCAA----CATTAAttctgatcaaaacaagcgttgaaaaccgatc
gi|77430 : gtaacattaaactttgaccccgttgaataatgacccgaagtgtcattttacaatgt-----TGAATAATGACG---C-CAAGGGTCACATTTCAA----CATTAAAgttctgatcagaacagtcgttgaa
gi|77431 : gtaaaattaaattttgacccgt-----TGAA-AAT--TGA--C-CC-AGGTCACATTTCAA----CATTAAAttctgaccaaaaaagccgtcgaaaactgatc
gi|77415 : gtaacactaaatttataccccgt-----TGAA-AAT--TTA--C-CC-GGGTCACATTTCAA----CATTAAAttctgatcaaacagcctatgaaaactgatcattgttaaat
gi|77429 : gcaacattaaatattgacccaatgtAAT--TGA--C-CC-GGGTCACATTTCAA----CATTAAAttctgatcaaaacagtcgttgaaaactaatcagtgttaaat
gi|77435 : gtaacattaaattttgaccccgttgaaaatagaccgttgaaaaaagaccccaagggtcatttttcaatgttaaA--C-A--GGACCACATTTTAA----CATTGAAAACTGttctgatcaaaacagtcgttgaa
gi|77443 : ttaaaagttgatcactcatctgttgaaagtgacccatggggtcatttttcaacggggtcaaaatttaatgtt--GGACCACATTTTAA----CATTGAAAACTGCTATTATAAAGTTGGCTGTTTTCGTGGATATAAAATGTGAATTTTAACC-GAAAATGTT-TTATACGA-TATA
Alignments
lowQualScore : 1111111111111111 22222222 111111111111111111111 1111 1111111
lowQualScore : 1 1 222222 11 5555555555555 55555555555555 4444444444 66666 1 1 1 3333333333333333 333 33333 22222222 999999 555555555555555555555 6666 4444 1 1 2 2 22 4444 4 2 9999999 2 2 3 666666 4444 2
lowQualScore : . . ...... .. ............. .............. .......... ..... . . . ................ ... ..... ........ ...... ..................... .... .... . . . . .. .... . . ....... . . . ...... .... .
lowQualScore : 0 0 999999 44 5555555555555 77777777777777 8888888888 22222 0 0 7 4444444444444444 222 11111 33333333 999999 555555555555555555555 7777 1111 1 1 0 1 99 5555 2 1 5555555 1 1 9 444444 5555 9
consensus : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCAN--GGG-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--AA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTA-T-TTAA----TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGT------TGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Reference ( family-523 ) : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCAT--GGG-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--NA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTA-T-T-AA----TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACNAACAGT------TGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77402 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCTAT--GGA-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--CA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTA-T-T-AA----TGACCCACTCACACGTGAAAAA-ATGACCTTC-GTTAAAATCTGATCACAAACAGT------TGGAAACTGACTGAATAATCGACCGGACCACATTTCAA----CATTGAAAACTGCTGTAATAAATTTGGATGTTCTCATGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77403 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCAT--GGG-TC-AC-TTTCAACA--G------------A---TG----A---G----TGA------TC--AA-C------TTTT-----AA----CA----C-TGAAAA-CTGACCC-C-G--AC----TGTTATT-T-AA----TGAACCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGT------TTGAAACTGACCGAATTGTCGGCCAGACCACATTTCAA----CATTGATAACTGCTATTATATATTTGGATGTTCTCGTGGATGTAAAGTGTGAAATATAACCGGAAAATGTTGACATACGA-TATA
gi|77404 : GTAACAT-AAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCAT--GGT-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--CA-T------TGTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTT-T-TTAA----TGACCCACCAACATGTGAAAAA-TTGACCATC-GTTAAAATCTGATCATCAACAGT------TGGAAACTGACCAAATAGTCGACAGGAACACATTTCAA----CATTGAAAACTGCTATTATAAATTTCGATGTTCTCGTGGATATAAAGTGTTAATTATAACCAGAAAATGTTGGTATACGA-TATA
gi|77405 : GCAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCTCAT--GGG-TC-ACTTTTCATCG--G------------A---TA----A---G----TGA------TT--CA-T------TTTT-----AA----TA----C-TGAAAG-ACGACCC-C-G--AC----CGTTA-T-TTAA----TGACCCACCCACACGTGAAAAA-TTTACCGTC-GTTAAAATCTTATCACCGACAGT------TGGAAACTGACCGAATAGTCAGCCGGACCACATTTCAA----CATTGAAAAATGCTATCATAAATTTGGATGTTCTCGTGGATGTAAAGTGTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77406 : GTAACAT-TAA-ATTTTGATC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAA--GGG-TC-ACATTTCAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AATAGTCG----T-TGAAAA-CTGATC
gi|77407 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAAT--GGG-TC-ACTTTTCAACG--G------------A---TG----A---G----AGA------TA--TA-T------TTTT-----AA----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTA-T-TTAA----TGACCTACCCACACGTGAAAAA-TTGACCCTC-GATAATATCTGATCACCAACAGT------TGAAAACTGACCGAATAGTCGGCCGAATCACATTTCAA----CATTGAAAACTACTATTATAATTTTGGATGTTCTCGTGAATATAAAGTGTGAATTATTACTGGAATATGTTGGTATACGA-TATA
gi|77408 : GTAACAT-TAA-ATTTTAACC------C--C-------------GT--------------TGAAAT-A--------TGACACCAA--GGG-TC-ATTTTTCAATGTTG------------A---AA----A---T----TGA------CC--CG-TGTCATATTTC-----AA----TA----T-TAAATT-CTGATC
gi|77409 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGATCCCAT--GGG-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--AA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-A--AC----AGTTATT-T-AA----TGATCCACCCACACGTGAAAAA-TTGACCCTC-GTCAAAATCTGATCAATA--------------------ACCGAATAGACGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATAAATTTGGATGTTCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATAaaaacagtcgttgaa
gi|77410 : GTAACAT-GAA-ATTTTGAAC------T--C-------------GT--------------TAAAAA-A--------TGAACTCAA--GGG-TC-ATTTTTCAATGTTG------------A---AA----A---T----TGACCCGGGTC--AC-A------TTTC-----AA----CA----T-TAAATT-CTGATC
gi|77411 : GTAACAT-TAA-ATTTTGACC------C--T-------------GT--------------TAACAT-A--------TGAACCAAT--GCG-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--CA-T------TTTT-----AA----CA----T-TGAAAAACTGACCC-C-C--AC----CGTTA-T-TTAA----TGACCCACCCACACGTGAAAAA-TTTACCCTT-CTCAAAACCTGATCACCAACAGT------TGGAAACTGACCGAATAGTCGGCCAGACCACATTTCAA----CATTGAAAACTGCTATTATGAATTTGGATGATCTCGTGGATATAAAGTGTCAATTAAAACCGGAAAATGTTTGTTTACGA-TATAaaaacagtcgttgaa
gi|77412 : GTAACAT-TAA-ATTTTAACC------C--C-------------AT--------------T-AAAA-A--------TGACGCCAT--GGG-TC-ACTTTTCAACG--G------------A---TT----A---G----TGA------TC--AA-T------TTTC-----AA----CA----T-TGAAAA-CTGACCC-T-G--GT----CGTTA-T-TTAA----TGACCCACCCACACGTGTAAAA-TTGATCCTC-GTTAAAATCTGATCACCAACAGT------TTGAAACTGACCGAATGGTCGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATTAATGTGGATGTTCTCTTGGATTAAAAGTGTGAATTATAACTGGGAAATGTTGGTTTACGA-TA
gi|77413 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAT--GGG-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--CA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTA-T-TTCA----TGACCCATCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCTGCAGT------TGGAAAGTAACCGAATAGTCGGCCGGACCACATTACAA----CATAGTAAACTGCTATTATAAATTTGGATGTTCTTGCGAAT-T--------AATTATAACCGAAAAATGTTGATATACGA-TATA
gi|77414 : GTAACAT-TAA-ATTTTTACC------C--C-------------GT--------------TGAAAA-------------------------------TTTCAACG--G------------A---TG----A---G----TGA------TC--AA-T------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTA-T-T-AAA---TGACCCATCCACACGTGAAAAAATTGACCTTTTGTTAAAATCTGATCACCAACAGT------TGGTAACTGACCAAATAAACGGCCGGACCACATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGATCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77415 : GCAACAT-TAA-ATATTGACC------CAAT-------------GT--------------TGAAAA-T--------TTACCC-----GGG-TC-ACATTTCAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AA----CAGTCGT-TGAAAA-CTAATC
gi|77416 : GTAACAT-TAA-ATTTTGACA------C--C-------------GT--------------TG-AAA-T--------TGA---CAC--GGG-TC-AAATTTCAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AA----CAGTCGT-TGAAAA-CTGATCagtgttaaat
gi|77417 : GTAATAT-TTA-ATTTTG-CC------C--C-------------GT--------------TGAATA----------TGACCACAT--GAG-TC-ACATTATAACG--G------------A---TA----A---G----TGA------TC--CA-T------TTTT-----TT----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTT-T-TTAA----TGACCCACCTACACGTGAAAAG-TTGACCCTC-GTTGAAATCTGATCACCAACAAT------TTGAATCTGACCGAACAGTCGGCCGGACAACTTTTCAA----GATTGAAAACTGCTATAATAAATTCGGATGTTCTCGTGattgttaaat
gi|77418 : GTAACAT-TAA-ATTTTGACC------C--CGGAAAAAAATGGGGT--------------CGAAAA-T--------TGA---AAC--GGG-TC-ACGTTTTAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77419 : GTAACAT-TAA-ATTTTGACC------C--G-------------GT--------------TGAAAA-A--------TGATCTCGT--GTG-TC-ACTTTTCAACG--G------------A---TG----G---G----TGA------TC--CA-T------TTTT-----AA----CA----T-TAAAAA-ATGACCC-C-G--AC----CGTTA-TAT-AA----AGACCCATCCACACGTGAAAAA-TTGACGCTC-GTTAAAACCTGATCATCAACAGT------TGGAAACTGACCAAATAGTCGGCCATATCAT-TTTTAATAGTCATCGAAA
gi|77420 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TTACCCCAA--GGG-TCAACTTT--------G------------A--------------------------------------------C-----AA----CT----T-TGAAAA-TTGACCCGC-GTCACATTTCGACA-T-T-AAATTCTGATCGAAACAGTCGTTAAAAA-CTGATCAGT-GTTAAATTTTGATCA
gi|77421 : GTAACAT-TAA-ATATTGACC------C--C-------------GT--------------TGAAAA-A--------TGAACCC----GGG-TC-ACATTTCAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77422 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-T--------TGAACCCAA--GGG-TC-ATTTTTCAATGTTG------------A---AA----A---T----TGACACGGGTC--AC-A------TTTA-----AA----CA----T-TAAATT-CTGATC
gi|77423 : GTGACAT-CAA-ATTTTGACC------C--A-------------GT--------------TGAAAA-A--------TGACCCCAA--AGA-TC-ATTTTTCAATGTTG------------A---AA----A---T----TGACCCGGGTC--CC-A------TTTC-----AA----CA----T-TAAATT-CTGATCA-A-A--AC----AGTCG-T-T-GAAAACTGACCaaaacagtcgttgaa
gi|77424 : GTTACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACCCAC--GGG-TC-ATTTTTCAATG--
gi|77425 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACTCAA--GGG-TC-ATTTTTCAA
gi|77425 : ---G----TG-------TC--AA-T------TTTC-----AA----TA----T-TGAAAA-ATGACCC-tattgaaaattgacacgggtcacatttcaacattaaa
gi|77425 : gtaacattaaattttgaccccgttaaaaaatgaactcaaT--------------TGAAAA-T--------TGAC---AC--GGG-TC-ACATTTCAACgggtcacatttcaacattaaa
gi|77426 : gtaacattaaattttgaccccgttaaaaaatgaactcaagggtcatttttcaataGTAACAT-TAA-ATTCTGACC------C--C-------------GT--------------TGAAAA-A--------TAACattaaa
gi|77427 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAATA-A--------TGATCCCAA--TGG-TC-ATTTTTCGATG--
gi|77427 : -TTGACCC-C-GTTGAATAATGATC-CCAATGGTCATTTTTCGATGTTGA--AAAT--TTACCCGGGTCACATTTCAA----CGTTAAAttgaaaatttacccgggtcacatttcaacgttaaatcctgatcaaaacagtcgttgaa
gi|77427 : gtaacattaaatt-TAA-ATTTT--CA------A--C-------------AT--------------CGAAAA-A--------TGA--CCATTGGGA-TC-ATTATTCAACG--G------------tcctgatcaaaacagtcgttgaa
gi|77427 : gtaacattaaattttgaccCAT-T----TTTCGAT------------------------GT--------------TGAAAA-T--------TTACCC-----GGG-TC-ACATTTCAACG--cccgggtcacatttcaacgttaaatcctgatcaaaacagtcgttgaa
gi|77428 : gtaacattaaattttgaccccgttgaataatgatcccaatggtGTAACAT-TAA-ACTTTGACC------C--C-------------GT--------------TGAATA-A--------TGACCCGAA--GTG-TC-ATTTTACAATGTTG------------A---AA----A---T----TGA------TCCGGG-TCACA--TTTC-----AA----CA----T-TAAGTT-CTGATCttaaatcctgatcaaaacagtcgttgaa
gi|77429 : GTAACAT-TAA-ATTTTGACC------C--C-------------GTTGAAAATAGACCGTTGAAAA-A--------AGACCCCAA--GGG-TC-ATTTTTCAATGTTA------------AAATTG----ACCCG-----GG------TC--AC-A------TTTC-----AA----CA----T-TAAATT-CTGATCagaacagtcgttgaa
gi|77430 : GTAAAAT-TAA-ATTTTGACC------C----------------GT--------------TGAATA-A--------TGACGCCAA--GGG-TC-ACATTTCAAC----------------A---TT----A---AATTCTGA------CC--AA-----------------AAAAGCCG----T-CGAAAA-CTGATCaaaacagtcgttgaa
gi|77431 : GTAACAC-TAA-ATTTATACC------C--C-------------GT--------------TGAAAA-T--------TGACCC-----AGG-TC-ACATTTCAAC----------------A---TT----A---AATTCTGA------TC--A------------------AA----CAGCC-TATGAAAA-CTGATC
gi|77432 : GTAACAT-TAA-ATTTTGATC------C--C-------------AT--------------TAAGAA-T--------TGAACC-----GGG-TC-AGATTTCAAC----------------A---TT----A---AATTCTGA------TC--AA-----------------AATAT-CG----T-TGAAAA-CTGATCattgttaaat
gi|77433 : GTAACACATA----TTTGACC------C--T-------------GT--------------TGGAAA-T--------TGACCC-----GGG-TC-ATATTTCAAC----------------AT--TG----A---ATTC-TGA------TC--AA-----------------AA----CAAGCGT-TGAAAA-CCGATC
gi|77434 : AACAT-TTA-ATTTTGACC------C--C-------------GT--------------TGAAAATACTAAAAATTGACCC-----GGA-TC-ACATTTCAAC
gi|77435 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCAT--GGG-TC-AC-TTTCAACA--G------------A---TG----A---G----TGA------TC--AA-C------TTTT-----AA----
gi|77435 : T-TAA-AAGTTGATCACTCATC--T-------------GT--------------TGAAAG----------TGACCC-AT--GGGGTC-ATTTTTCAACG--GGGTCAAAATTTAA---TGTTACA---G-----GA------CC--AC-A------TTTT-----AA----CA----T-TGAAAA-CTGaggaccacattttaacattgaaaactg
gi|77436 : -TAATATTTTGACC------C--T-------------GT--------------TGAATA-A--------TGACCCCAT--GGG-TC-ACTTTTCACCG--A------------A---TG----A---G----TGA------TC--AA-A------TTTT-----AA----CA----T-TGAAAA-TTTATCC-C-T--AC----CGTTA-T-T-AAA---TGACCCACCCACACGTGAAAAT-TTGACCCTC-GTTAAAAT-TGATCAC-AATAGT------TGGAAACTGACAGAATAGTCAGCCGGACGAGATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGTTCTTATGGATAAAAAGTGAGAATTATAACCGGAAAATGTTGGTATGCGA-CATA
gi|77437 : AACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAAT--GGG-TC-ACTTTTCAACG--G------------
gi|77438 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAT--GGG-TC-ACTTTTCAACG--G------------
gi|77439 : G-TC-ACTTTTCAACG--G------------A---TG----A---G----TGA------TG--CA-T------TTT------AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGGTT-T-T-AA----TGACCCACCCATACGTGAAAAA-TTGATC---------------ATCACCAACAAT------TGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CTTTGATAACTGCTATTATAAATTTGGGTGTTCTCGTTGATATGAACTGTaccggcaaccgacc
gi|77440 : C-ACTTTTCAACG--G------------A---TG----A---G----TGA------TC--AAAT------TTTT-----AA----CA----T-TGAAAA-CTGACGC-C-A--AC----C--------------------CACTCTCACGTGAAAAA-TTGATCCTC-GTTAAAATCTGACCACCAACAGT------TGGAAACTGGCCGAATAGTCGGCCGGATCACATTTCAA----CACTAAAAACTTATGTTATAAATTCGGA
gi|77441 : TTTTGAACG--G------------A---TG----A---A----TGA------TC--AA-T------TGTA-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CTTTA-T-TTGA----TGACCCACACACACTTTAAAAA-TTGACACCC-GTTGAAATCTG-----------T------TGGAAACTGACCGTAAAGTCGGCCAGGCCACATTTCAA----CATTGAAAAC--ATATTATAAATTTTGATGTTCTCGTGGATATAAAGTGAGAATTATAACCGGAAAATGTTGGTATA-GATTATA
gi|77442 : A-T------TTTTGTTAGAT----CA----T-CAAATA-TTGACCC-CCG--AC----CGTTA-T-TTAA----TAACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGT------TGGAA----------TAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTACTCGTGGATGTAAA--GTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77443 : GGACCACATTTTAA----CATTGAAAACTGCTATTATAAAGTTGGCTGTTTTCGTGGATATAAAATGTGAATTTTAACC-GAAAATGTT-TTATACGA-TATA
Alignments
lowQualScore : 222222222222222222222222222222222222 111111 111111 1111
lowQualScore : 1 1 333333 11 5555555555555 66666666666666 4444444444 1 3 1 888888888888888888888888888888888888 333333 222222 1 11 333333 444444 6666 3333 1 1 2 2 22 4444 0 777 2 2 4444 2
lowQualScore : . . ...... .. ............. .............. .......... . . . .................................... ...... ...... . .. ...... ...... .... .... . . . . .. .... . ... . . .... .
lowQualScore : 1 1 000000 44 8888888888888 22222222222222 5555555555 9 6 0 999999999999999999999999999999999999 222222 888888 1 55 888888 888888 5555 8888 1 1 1 1 99 5555 2 444 2 2 7777 9
consensus : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Reference ( family-523 ) : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77402 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCTATGGATC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATT-AA---TGACCCACTCACACGTGAAAAA-ATGACCTTC-GTTAAAATCTGATCACAAACAGTTGGAAACTGACTGAATAATCGACCGGACCACATTTCAA----CATTGAAAACTGCTGTAATAAATTTGGATGTTCTCATGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77403 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTT-CAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----CA----C-TGAAAA-CTGACCC-C-G--AC----TGTTATTTAA---TGAACCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATTGTCGGCCAGACCACATTTCAA----CATTGATAACTGCTATTATATATTTGGATGTTCTCGTGGATGTAAAGTGTGAAATATAACCGGAAAATGTTGACATACGA-TATA
gi|77404 : GTAACAT-AAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGTTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TGTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTTTTTAA---TGACCCACCAACATGTGAAAAA-TTGACCATC-GTTAAAATCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGACAGGAACACATTTCAA----CATTGAAAACTGCTATTATAAATTTCGATGTTCTCGTGGATATAAAGTGTTAATTATAACCAGAAAATGTTGGTATACGA-TATA
gi|77405 : GCAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCTCATGGGTC-ACTTTTCATCG--G------------A----TA----A---G----T------GA------T-T--CA-T----TTTT-----AA----TA----C-TGAAAG-ACGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCGTC-GTTAAAATCTTATCACCGACAGTTGGAAACTGACCGAATAGTCAGCCGGACCACATTTCAA----CATTGAAAAATGCTATCATAAATTTGGATGTTCTCGTGGATGTAAAGTGTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77406 : GTAACAT-TAA-ATTTTGATC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAGTCG----T-TGAAAA-CTGATC
gi|77407 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----A------GA------T-A--TA-T----TTTT-----AA----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTATTTAA---TGACCTACCCACACGTGAAAAA-TTGACCCTC-GATAATATCTGATCACCAACAGTTGAAAACTGACCGAATAGTCGGCCGAATCACATTTCAA----CATTGAAAACTACTATTATAATTTTGGATGTTCTCGTGAATATAAAGTGTGAATTATTACTGGAATATGTTGGTATACGA-TATA
gi|77408 : GTAACAT-TAA-ATTTTAACC------C--C-------------GT--------------TGAAAT-A--------TGACACCAAGGGTC-ATTTTTCAATGTTG------------AAAATTG----ACCCG----T------G-------T-C--AT-A----TTTC-----AA----TA----T-TAAATT-CTGATC
gi|77409 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGATCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-A--AC----AGTTATTTAA---TGATCCACCCACACGTGAAAAA-TTGACCCTC-GTCAAAATCTGATCA--A------------TAACCGAATAGACGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATAAATTTGGATGTTCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATAaaaacagtcgttgaa
gi|77410 : GTAACAT-GAA-ATTTTGAAC------T--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATC
gi|77411 : GTAACAT-TAA-ATTTTGACC------C--T-------------GT--------------TAACAT-A--------TGAACCAATGCGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAAACTGACCC-C-C--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCCTT-CTCAAAACCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCAGACCACATTTCAA----CATTGAAAACTGCTATTATGAATTTGGATGATCTCGTGGATATAAAGTGTCAATTAAAACCGGAAAATGTTTGTTTACGA-TATAaaaacagtcgttgaa
gi|77412 : GTAACAT-TAA-ATTTTAACC------C--C-------------AT--------------T-AAAA-A--------TGACGCCATGGGTC-ACTTTTCAACG--G------------A----TT----A---G----T------GA------T-C--AA-T----TTTC-----AA----CA----T-TGAAAA-CTGACCC-T-G--GT----CGTTATTTAA---TGACCCACCCACACGTGTAAAA-TTGATCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATGGTCGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATTAATGTGGATGTTCTCTTGGATTAAAAGTGTGAATTATAACTGGGAAATGTTGGTTTACGA-TA
gi|77413 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTCA---TGACCCATCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCTGCAGTTGGAAAGTAACCGAATAGTCGGCCGGACCACATTACAA----CATAGTAAACTGCTATTATAAATTTGGATGTTCTTGCGAAT-T--------AATTATAACCGAAAAATGTTGATATACGA-TATA
gi|77414 : GTAACAT-TAA-ATTTTTACC------C--C-------------GT--------------TGAAAA----------------------------TTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTAAA---TGACCCATCCACACGTGAAAAAATTGACCTTTTGTTAAAATCTGATCACCAACAGTTGGTAACTGACCAAATAAACGGCCGGACCACATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGATCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77415 : GCAACAT-TAA-ATATTGACC------CAAT-------------GT--------------TGAAAA-T--------TTACCC---GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTAATC
gi|77416 : GTAACAT-TAA-ATTTTGACA------C--C-------------GT--------------TG-AAA-T--------TGA---CACGGGTC-AAATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATCagtgttaaat
gi|77417 : GTAATAT-TTA-ATTTTG-CC------C--C-------------GT--------------TGAATA----------TGACCACATGAGTC-ACATTATAACG--G------------A----TA----A---G----T------GA------T-C--CA-T----TTTT-----TT----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTTTTTAA---TGACCCACCTACACGTGAAAAG-TTGACCCTC-GTTGAAATCTGATCACCAACAATTTGAATCTGACCGAACAGTCGGCCGGACAACTTTTCAA----GATTGAAAACTGCTATAATAAATTCGGATGTTCTCGTGattgttaaat
gi|77418 : GTAACAT-TAA-ATTTTGACC------C--CGGAAAAAAATGGGGT--------------CGAAAA-T--------TGA---AACGGGTC-ACGTTTTAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77419 : GTAACAT-TAA-ATTTTGACC------C--G-------------GT--------------TGAAAA-A--------TGATCTCGTGTGTC-ACTTTTCAACG--G------------A----TG----G---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TAAAAA-ATGACCC-C-G--AC----CGTTATATAA---AGACCCATCCACACGTGAAAAA-TTGACGCTC-GTTAAAACCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGGCCATATCAT-TTTTAATAGTCATCGAAA
gi|77420 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TTACCCCAAGGGTCAACTTT--------G------------A------------------------------------C--AA-C----T--------------------T-TGAAAA-TTGACCCGC-GTCACATTTCGACATTAAATTCTGATCGAAACAGTCGTTAAAAA-CTGATCAGT-GTTAAATTTTGATCA
gi|77421 : GTAACAT-TAA-ATATTGACC------C--C-------------GT--------------TGAAAA-A--------TGAACCC--GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77422 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-T--------TGAACCCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTA-----AA----CA----T-TAAATT-CTGATC
gi|77423 : GTGACAT-CAA-ATTTTGACC------C--A-------------GT--------------TGAAAA-A--------TGACCCCAAAGATC-ATTTTTCAATGTTG------------A----AA----A---T----T------GA------C-CCGGG-TCCCATTTC-----AA----CA----T-TAAATT-CTGATCA-A-A--AC----AGTCGTTGAAAACTGACCaaaacagtcgttgaa
gi|77424 : GTTACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACCCACGGGTC-ATTTTTCAATG--
gi|77425 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATATTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTC-----AA----CA----T-TAAA
gi|77426 : GTAACAT-TAA-ATTCTGACC------C--C-------------GT--------------TGAAAA-A--------TAAC
gi|77427 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAATA-A--------TGATCCCAATGGTC-ATTTTTCGATGTTG------------A----AA----A---T----TTACCCGGG------T-C--AC-A----TTTC-----AA----CG----T-TAAATC-CTGATC
gi|77428 : GTAACAT-TAA-ACTTTGACC------C--C-------------GT--------------TGAATA-A--------TGACCCGAAGTGTC-ATTTTACAATGTTG------------A----AA----A---T----T------GATCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAGTT-CTGATCaaaacagtcgttgaa
gi|77429 : GTAACAT-TAA-ATTTTGACC------C--C-------------GTTGAAAATAGACCGTTGAAAA-A--------AGACCCCAAGGGTC-ATTTTTCAATGTTA------------AAAT-TG----ACCCG-----------GG------T-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATCagaacagtcgttgaa
gi|77430 : GTAAAAT-TAA-ATTTTGACC------C----------------GT--------------TGAATA-A--------TGACGCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------C-C--AA---------------AAAAGCCG----T-CGAAAA-CTGATCaaaacagtcgttgaa
gi|77431 : GTAACAC-TAA-ATTTATACC------C--C-------------GT--------------TGAAAA-T--------TGACCC---AGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--A----------------AA----CAGCC-TATGAAAA-CTGATC
gi|77432 : GTAACAT-TAA-ATTTTGATC------C--C-------------AT--------------TAAGAA-T--------TGAACC---GGGTC-AGATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAT-CG----T-TGAAAA-CTGATCattgttaaat
gi|77433 : GTAACACATA----TTTGACC------C--T-------------GT--------------TGGAAA-T--------TGACCC---GGGTC-ATATTTCAAC----------------AT---TG----A---ATTC-T------GA------T-C--AA---------------AA----CAAGCGT-TGAAAA-CCGATC
gi|77434 : AACAT-TTA-ATTTTGACC------C--C-------------GT--------------TGAAAATACTAAAAATTGACCC---GGATC-ACATTTCAAC
gi|77435 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-AC-TTTCAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----
gi|77435 : T-TAA-AAGTTGATCACTCATC--T-------------GT--------------TGAAAG----------TGACCCATGGGGTC-ATTTTTCAACG--GGGTCAAAATTTAA----TGTTACA---G-----------GA------C-C--AC-A----TTTT-----AA----CA----T-TGAAAA-CTGaggaccacattttaacattgaaaactg
gi|77436 : -TAATATTTTGACC------C--T-------------GT--------------TGAATA-A--------TGACCCCATGGGTC-ACTTTTCACCG--A------------A----TG----A---G----T------GA------T-C--AA-A----TTTT-----AA----CA----T-TGAAAA-TTTATCC-C-T--AC----CGTTATTAAA---TGACCCACCCACACGTGAAAAT-TTGACCCTC-GTTAAAAT-TGATCA-CAATAGTTGGAAACTGACAGAATAGTCAGCCGGACGAGATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGTTCTTATGGATAAAAAGTGAGAATTATAACCGGAAAATGTTGGTATGCGA-CATA
gi|77437 : AACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------
gi|77438 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------
gi|77439 : GTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------TGC--A-------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGGT-TTTAA---TGACCCACCCATACGTGAAAAA-TTGATC---------------ATCACCAACAATTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CTTTGATAACTGCTATTATAAATTTGGGTGTTCTCGTTGATATGAACTGTaccggcaaccgacc
gi|77440 : C-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AAAT----TTTT-----AA----CA----T-TGAAAA-CTGACGC-C-A--AC----C-----------------CACTCTCACGTGAAAAA-TTGATCCTC-GTTAAAATCTGACCACCAACAGTTGGAAACTGGCCGAATAGTCGGCCGGATCACATTTCAA----CACTAAAAACTTATGTTATAAATTCGGA
gi|77441 : TTTTGAACG--G------------A----TG----A---A----T------GA------T-C--AA-T----TGTA-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CTTTATTTGA---TGACCCACACACACTTTAAAAA-TTGACACCC-GTTGAAATCT-----------GTTGGAAACTGACCGTAAAGTCGGCCAGGCCACATTTCAA----CATTGAAAAC--ATATTATAAATTTTGATGTTCTCGTGGATATAAAGTGAGAATTATAACCGGAAAATGTTGGTATA-GATTATA
gi|77442 : A-T----TTTTGTTAGAT----CA----T-CAAATA-TTGACCC-CCG--AC----CGTTATTTAA---TAACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTG----------GAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTACTCGTGGATGTAAA--GTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77443 : GGACCACATTTTAA----CATTGAAAACTGCTATTATAAAGTTGGCTGTTTTCGTGGATATAAAATGTGAATTTTAACC-GAAAATGTT-TTATACGA-TATA
Alignments
lowQualScore : 222222222222222222222222222222222222 111111 111111 1111
lowQualScore : 1 1 333333 11 5555555555555 66666666666666 4444444444 1 3 1 888888888888888888888888888888888888 333333 222222 1 11 333333 444444 6666 3333 1 1 2 2 22 4444 0 777 2 2 4444 2
lowQualScore : . . ...... .. ............. .............. .......... . . . .................................... ...... ...... . .. ...... ...... .... .... . . . . .. .... . ... . . .... .
lowQualScore : 1 1 000000 44 8888888888888 22222222222222 5555555555 9 6 0 999999999999999999999999999999999999 222222 888888 1 55 888888 888888 5555 8888 1 1 1 1 99 5555 2 444 2 2 7777 9
consensus : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Reference ( family-523 ) : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77402 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCTATGGATC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATT-AA---TGACCCACTCACACGTGAAAAA-ATGACCTTC-GTTAAAATCTGATCACAAACAGTTGGAAACTGACTGAATAATCGACCGGACCACATTTCAA----CATTGAAAACTGCTGTAATAAATTTGGATGTTCTCATGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77403 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTT-CAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----CA----C-TGAAAA-CTGACCC-C-G--AC----TGTTATTTAA---TGAACCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATTGTCGGCCAGACCACATTTCAA----CATTGATAACTGCTATTATATATTTGGATGTTCTCGTGGATGTAAAGTGTGAAATATAACCGGAAAATGTTGACATACGA-TATA
gi|77404 : GTAACAT-AAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGTTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TGTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTTTTTAA---TGACCCACCAACATGTGAAAAA-TTGACCATC-GTTAAAATCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGACAGGAACACATTTCAA----CATTGAAAACTGCTATTATAAATTTCGATGTTCTCGTGGATATAAAGTGTTAATTATAACCAGAAAATGTTGGTATACGA-TATA
gi|77405 : GCAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCTCATGGGTC-ACTTTTCATCG--G------------A----TA----A---G----T------GA------T-T--CA-T----TTTT-----AA----TA----C-TGAAAG-ACGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCGTC-GTTAAAATCTTATCACCGACAGTTGGAAACTGACCGAATAGTCAGCCGGACCACATTTCAA----CATTGAAAAATGCTATCATAAATTTGGATGTTCTCGTGGATGTAAAGTGTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77406 : GTAACAT-TAA-ATTTTGATC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAGTCG----T-TGAAAA-CTGATC
gi|77407 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----A------GA------T-A--TA-T----TTTT-----AA----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTATTTAA---TGACCTACCCACACGTGAAAAA-TTGACCCTC-GATAATATCTGATCACCAACAGTTGAAAACTGACCGAATAGTCGGCCGAATCACATTTCAA----CATTGAAAACTACTATTATAATTTTGGATGTTCTCGTGAATATAAAGTGTGAATTATTACTGGAATATGTTGGTATACGA-TATA
gi|77408 : GTAACAT-TAA-ATTTTAACC------C--C-------------GT--------------TGAAAT-A--------TGACACCAAGGGTC-ATTTTTCAATGTTG------------AAAATTG----ACCCG----T------G-------T-C--AT-A----TTTC-----AA----TA----T-TAAATT-CTGATC
gi|77409 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGATCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-A--AC----AGTTATTTAA---TGATCCACCCACACGTGAAAAA-TTGACCCTC-GTCAAAATCTGATCA--A------------TAACCGAATAGACGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATAAATTTGGATGTTCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATAaaaacagtcgttgaa
gi|77410 : GTAACAT-GAA-ATTTTGAAC------T--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATC
gi|77411 : GTAACAT-TAA-ATTTTGACC------C--T-------------GT--------------TAACAT-A--------TGAACCAATGCGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAAACTGACCC-C-C--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCCTT-CTCAAAACCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCAGACCACATTTCAA----CATTGAAAACTGCTATTATGAATTTGGATGATCTCGTGGATATAAAGTGTCAATTAAAACCGGAAAATGTTTGTTTACGA-TATAaaaacagtcgttgaa
gi|77412 : GTAACAT-TAA-ATTTTAACC------C--C-------------AT--------------T-AAAA-A--------TGACGCCATGGGTC-ACTTTTCAACG--G------------A----TT----A---G----T------GA------T-C--AA-T----TTTC-----AA----CA----T-TGAAAA-CTGACCC-T-G--GT----CGTTATTTAA---TGACCCACCCACACGTGTAAAA-TTGATCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATGGTCGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATTAATGTGGATGTTCTCTTGGATTAAAAGTGTGAATTATAACTGGGAAATGTTGGTTTACGA-TA
gi|77413 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTCA---TGACCCATCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCTGCAGTTGGAAAGTAACCGAATAGTCGGCCGGACCACATTACAA----CATAGTAAACTGCTATTATAAATTTGGATGTTCTTGCGAAT-T--------AATTATAACCGAAAAATGTTGATATACGA-TATA
gi|77414 : GTAACAT-TAA-ATTTTTACC------C--C-------------GT--------------TGAAAA----------------------------TTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTAAA---TGACCCATCCACACGTGAAAAAATTGACCTTTTGTTAAAATCTGATCACCAACAGTTGGTAACTGACCAAATAAACGGCCGGACCACATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGATCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77415 : GCAACAT-TAA-ATATTGACC------CAAT-------------GT--------------TGAAAA-T--------TTACCC---GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTAATC
gi|77416 : GTAACAT-TAA-ATTTTGACA------C--C-------------GT--------------TG-AAA-T--------TGA---CACGGGTC-AAATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATCagtgttaaat
gi|77417 : GTAATAT-TTA-ATTTTG-CC------C--C-------------GT--------------TGAATA----------TGACCACATGAGTC-ACATTATAACG--G------------A----TA----A---G----T------GA------T-C--CA-T----TTTT-----TT----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTTTTTAA---TGACCCACCTACACGTGAAAAG-TTGACCCTC-GTTGAAATCTGATCACCAACAATTTGAATCTGACCGAACAGTCGGCCGGACAACTTTTCAA----GATTGAAAACTGCTATAATAAATTCGGATGTTCTCGTGattgttaaat
gi|77418 : GTAACAT-TAA-ATTTTGACC------C--CGGAAAAAAATGGGGT--------------CGAAAA-T--------TGA---AACGGGTC-ACGTTTTAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77419 : GTAACAT-TAA-ATTTTGACC------C--G-------------GT--------------TGAAAA-A--------TGATCTCGTGTGTC-ACTTTTCAACG--G------------A----TG----G---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TAAAAA-ATGACCC-C-G--AC----CGTTATATAA---AGACCCATCCACACGTGAAAAA-TTGACGCTC-GTTAAAACCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGGCCATATCAT-TTTTAATAGTCATCGAAA
gi|77420 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TTACCCCAAGGGTCAACTTT--------G------------A------------------------------------C--AA-C----T--------------------T-TGAAAA-TTGACCCGC-GTCACATTTCGACATTAAATTCTGATCGAAACAGTCGTTAAAAA-CTGATCAGT-GTTAAATTTTGATCA
gi|77421 : GTAACAT-TAA-ATATTGACC------C--C-------------GT--------------TGAAAA-A--------TGAACCC--GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77422 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-T--------TGAACCCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTA-----AA----CA----T-TAAATT-CTGATC
gi|77423 : GTGACAT-CAA-ATTTTGACC------C--A-------------GT--------------TGAAAA-A--------TGACCCCAAAGATC-ATTTTTCAATGTTG------------A----AA----A---T----T------GA------C-CCGGG-TCCCATTTC-----AA----CA----T-TAAATT-CTGATCA-A-A--AC----AGTCGTTGAAAACTGACCaaaacagtcgttgaa
gi|77424 : GTTACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACCCACGGGTC-ATTTTTCAATG--
gi|77425 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATATTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTC-----AA----CA----T-TAAA
gi|77426 : GTAACAT-TAA-ATTCTGACC------C--C-------------GT--------------TGAAAA-A--------TAAC
gi|77427 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAATA-A--------TGATCCCAATGGTC-ATTTTTCGATGTTG------------A----AA----A---T----TTACCCGGG------T-C--AC-A----TTTC-----AA----CG----T-TAAATC-CTGATC
gi|77428 : GTAACAT-TAA-ACTTTGACC------C--C-------------GT--------------TGAATA-A--------TGACCCGAAGTGTC-ATTTTACAATGTTG------------A----AA----A---T----T------GATCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAGTT-CTGATCaaaacagtcgttgaa
gi|77429 : GTAACAT-TAA-ATTTTGACC------C--C-------------GTTGAAAATAGACCGTTGAAAA-A--------AGACCCCAAGGGTC-ATTTTTCAATGTTA------------AAAT-TG----ACCCG-----------GG------T-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATCagaacagtcgttgaa
gi|77430 : GTAAAAT-TAA-ATTTTGACC------C----------------GT--------------TGAATA-A--------TGACGCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------C-C--AA---------------AAAAGCCG----T-CGAAAA-CTGATCaaaacagtcgttgaa
gi|77431 : GTAACAC-TAA-ATTTATACC------C--C-------------GT--------------TGAAAA-T--------TGACCC---AGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--A----------------AA----CAGCC-TATGAAAA-CTGATC
gi|77432 : GTAACAT-TAA-ATTTTGATC------C--C-------------AT--------------TAAGAA-T--------TGAACC---GGGTC-AGATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAT-CG----T-TGAAAA-CTGATCattgttaaat
gi|77433 : GTAACACATA----TTTGACC------C--T-------------GT--------------TGGAAA-T--------TGACCC---GGGTC-ATATTTCAAC----------------AT---TG----A---ATTC-T------GA------T-C--AA---------------AA----CAAGCGT-TGAAAA-CCGATC
gi|77434 : AACAT-TTA-ATTTTGACC------C--C-------------GT--------------TGAAAATACTAAAAATTGACCC---GGATC-ACATTTCAAC
gi|77435 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-AC-TTTCAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----
gi|77435 : T-TAA-AAGTTGATCACTCATC--T-------------GT--------------TGAAAG----------TGACCCATGGGGTC-ATTTTTCAACG--GGGTCAAAATTTAA----TGTTACA---G-----------GA------C-C--AC-A----TTTT-----AA----CA----T-TGAAAA-CTGaggaccacattttaacattgaaaactg
gi|77436 : -TAATATTTTGACC------C--T-------------GT--------------TGAATA-A--------TGACCCCATGGGTC-ACTTTTCACCG--A------------A----TG----A---G----T------GA------T-C--AA-A----TTTT-----AA----CA----T-TGAAAA-TTTATCC-C-T--AC----CGTTATTAAA---TGACCCACCCACACGTGAAAAT-TTGACCCTC-GTTAAAAT-TGATCA-CAATAGTTGGAAACTGACAGAATAGTCAGCCGGACGAGATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGTTCTTATGGATAAAAAGTGAGAATTATAACCGGAAAATGTTGGTATGCGA-CATA
gi|77437 : AACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------
gi|77438 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------
gi|77439 : GTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------TGC--A-------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGGT-TTTAA---TGACCCACCCATACGTGAAAAA-TTGATC---------------ATCACCAACAATTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CTTTGATAACTGCTATTATAAATTTGGGTGTTCTCGTTGATATGAACTGTaccggcaaccgacc
gi|77440 : C-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AAAT----TTTT-----AA----CA----T-TGAAAA-CTGACGC-C-A--AC----C-----------------CACTCTCACGTGAAAAA-TTGATCCTC-GTTAAAATCTGACCACCAACAGTTGGAAACTGGCCGAATAGTCGGCCGGATCACATTTCAA----CACTAAAAACTTATGTTATAAATTCGGA
gi|77441 : TTTTGAACG--G------------A----TG----A---A----T------GA------T-C--AA-T----TGTA-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CTTTATTTGA---TGACCCACACACACTTTAAAAA-TTGACACCC-GTTGAAATCT-----------GTTGGAAACTGACCGTAAAGTCGGCCAGGCCACATTTCAA----CATTGAAAAC--ATATTATAAATTTTGATGTTCTCGTGGATATAAAGTGAGAATTATAACCGGAAAATGTTGGTATA-GATTATA
gi|77442 : A-T----TTTTGTTAGAT----CA----T-CAAATA-TTGACCC-CCG--AC----CGTTATTTAA---TAACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTG----------GAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTACTCGTGGATGTAAA--GTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77443 : GGACCACATTTTAA----CATTGAAAACTGCTATTATAAAGTTGGCTGTTTTCGTGGATATAAAATGTGAATTTTAACC-GAAAATGTT-TTATACGA-TATA
blockSeqs : A T ACTCAT AA GGAAAAAAATGGG TGAAAATAGACCGT TACTAAAAAT C T A GGGGTCAAAATTTAATGTTACAG TACCCG CCCGGG G CG TCCCA TGTTAG TAGT GTCG A A G C TC ATTT TTC A T TAGT T
blockSeqs : . . . . . . A C T . GTTGAAAATTGACCCG . CACGGG . . AT T AAGC GTCG . . . . . . AAC . . . .
blockSeqs : . . . . . . A C T . GTTAAAATTGACCCG . CACGGG . . C T TAT GTCG . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTAAATTC . TCCGGG . . T T . GTCG . . . . . . . . . . .
blockSeqs : . . . . . . A A T . GTTGAAAAT . . . . T T . AGCG . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTAAATTC . . . . T C . GCC . . . . . . . . . . .
blockSeqs : . . . . . . A C T . ATTAAATTC . . . . A T . . . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTAAATTC . . . . T C . . . . . . . . . . . . .
blockSeqs : . . . . . . A A T . ATTAAATTC . . . . A T . . . . . . . . . . . . .
blockSeqs : . . . . . . A C T . GTTGAAAAT . . . . T C . . . . . . . . . . . . .
blockSeqs : . . . . . . A C T . GTTGAAAAT . . . . T T . . . . . . . . . . . . .
blockSeqs : . . . . . . A C C . ATTGAAAAT . . . . T T . . . . . . . . . . . . .
blockSeqs : . . . . . . T C T . GTTGAAAAT . . . . T T . . . . . . . . . . . . .
blockSeqs : . . . . . . T A C . GTTGAAAAT . . . . T T . . . . . . . . . . . .
blockSeqs : . . . . . . T C T . ATTAAATTC . . . . T A . . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTAAATTC . . . . C C . . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTAAATTC . . . . A C . . . . . . . . . . . .
blockSeqs : . . . . . . A C A . ATTGAATTC . . . . A C . . . . . . . . .
blockSeqs : . . . . . . T C C . AGATGAG . . . . A C . . . .
blockSeqs : . . . . . . A C A . GGATGAG . . . . A C . . . .
blockSeqs : . . . . . . A C A . GGATAAG . . . . A T . . . .
blockSeqs : . . . . . . A C A . GGATGAG . . . . C T . . . .
blockSeqs : . . . . . . A G A . GGATGAG . . . . A T . . . .
blockSeqs : . . . . . . A C A . GGATGAG . . . . A T . . . .
blockSeqs : . . . . . . A C T . GGATTAG . . . . T T . . . .
blockSeqs : . . . . . . A C G . GGATGAG . . . . T A . . . .
blockSeqs : . . . . . . A A T . GGATGAG . . . . . . . . . .
blockSeqs : . . . . . . T C T . GGATAAG . . . . . . . . . .
blockSeqs : . . . . . . T A T . GGATGGG . . . . . . . . . .
blockSeqs : . . . . . . T C . . AGATGAG . . . . . . . . . .
blockSeqs : . . . . . . A . . . GAATGAG . . . . . . . . . .
blockSeqs : . . . . . . A . . . GGATGAG . . . . . . . . . .
blockSeqs : . . . . . . A . . . GGATGAG . . . . . . . . . .
blockSeqs : . . . . . . A . . . GGATGAA . . . . . . . . . .
blockSeqs : . . . . . . . . . . GA . . . . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : .
blockSeqCons :
originalCons : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
finalCons : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Alignments
lowQualScore : 222222222222222222222222222222222222 111111 111111 1111
lowQualScore : 1 1 333333 11 5555555555555 66666666666666 4444444444 1 3 1 888888888888888888888888888888888888 333333 222222 1 11 333333 444444 6666 3333 1 1 2 2 22 4444 0 777 2 2 4444 2
lowQualScore : . . ...... .. ............. .............. .......... . . . .................................... ...... ...... . .. ...... ...... .... .... . . . . .. .... . ... . . .... .
lowQualScore : 1 1 000000 44 8888888888888 22222222222222 5555555555 9 6 0 999999999999999999999999999999999999 222222 888888 1 55 888888 888888 5555 8888 1 1 1 1 99 5555 2 444 2 2 7777 9
consensus : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
Reference ( family-523 ) : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCANGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTTCTCGTGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77402 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCTATGGATC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATT-AA---TGACCCACTCACACGTGAAAAA-ATGACCTTC-GTTAAAATCTGATCACAAACAGTTGGAAACTGACTGAATAATCGACCGGACCACATTTCAA----CATTGAAAACTGCTGTAATAAATTTGGATGTTCTCATGGATATAAAGTGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77403 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTT-CAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----CA----C-TGAAAA-CTGACCC-C-G--AC----TGTTATTTAA---TGAACCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATTGTCGGCCAGACCACATTTCAA----CATTGATAACTGCTATTATATATTTGGATGTTCTCGTGGATGTAAAGTGTGAAATATAACCGGAAAATGTTGACATACGA-TATA
gi|77404 : GTAACAT-AAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGTTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TGTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTTTTTAA---TGACCCACCAACATGTGAAAAA-TTGACCATC-GTTAAAATCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGACAGGAACACATTTCAA----CATTGAAAACTGCTATTATAAATTTCGATGTTCTCGTGGATATAAAGTGTTAATTATAACCAGAAAATGTTGGTATACGA-TATA
gi|77405 : GCAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCTCATGGGTC-ACTTTTCATCG--G------------A----TA----A---G----T------GA------T-T--CA-T----TTTT-----AA----TA----C-TGAAAG-ACGACCC-C-G--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCGTC-GTTAAAATCTTATCACCGACAGTTGGAAACTGACCGAATAGTCAGCCGGACCACATTTCAA----CATTGAAAAATGCTATCATAAATTTGGATGTTCTCGTGGATGTAAAGTGTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77406 : GTAACAT-TAA-ATTTTGATC------C--T-------------GT--------------TGAAAA-A--------TGACCCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAGTCG----T-TGAAAA-CTGATC
gi|77407 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----A------GA------T-A--TA-T----TTTT-----AA----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTATTTAA---TGACCTACCCACACGTGAAAAA-TTGACCCTC-GATAATATCTGATCACCAACAGTTGAAAACTGACCGAATAGTCGGCCGAATCACATTTCAA----CATTGAAAACTACTATTATAATTTTGGATGTTCTCGTGAATATAAAGTGTGAATTATTACTGGAATATGTTGGTATACGA-TATA
gi|77408 : GTAACAT-TAA-ATTTTAACC------C--C-------------GT--------------TGAAAT-A--------TGACACCAAGGGTC-ATTTTTCAATGTTG------------AAAATTG----ACCCG----T------G-------T-C--AT-A----TTTC-----AA----TA----T-TAAATT-CTGATC
gi|77409 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGATCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-A--AC----AGTTATTTAA---TGATCCACCCACACGTGAAAAA-TTGACCCTC-GTCAAAATCTGATCA--A------------TAACCGAATAGACGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATAAATTTGGATGTTCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATAaaaacagtcgttgaa
gi|77410 : GTAACAT-GAA-ATTTTGAAC------T--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATC
gi|77411 : GTAACAT-TAA-ATTTTGACC------C--T-------------GT--------------TAACAT-A--------TGAACCAATGCGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAAACTGACCC-C-C--AC----CGTTATTTAA---TGACCCACCCACACGTGAAAAA-TTTACCCTT-CTCAAAACCTGATCACCAACAGTTGGAAACTGACCGAATAGTCGGCCAGACCACATTTCAA----CATTGAAAACTGCTATTATGAATTTGGATGATCTCGTGGATATAAAGTGTCAATTAAAACCGGAAAATGTTTGTTTACGA-TATAaaaacagtcgttgaa
gi|77412 : GTAACAT-TAA-ATTTTAACC------C--C-------------AT--------------T-AAAA-A--------TGACGCCATGGGTC-ACTTTTCAACG--G------------A----TT----A---G----T------GA------T-C--AA-T----TTTC-----AA----CA----T-TGAAAA-CTGACCC-T-G--GT----CGTTATTTAA---TGACCCACCCACACGTGTAAAA-TTGATCCTC-GTTAAAATCTGATCACCAACAGTTTGAAACTGACCGAATGGTCGGCCGGACCACATTTCAA----TATTGAAAACTTATATTATTAATGTGGATGTTCTCTTGGATTAAAAGTGTGAATTATAACTGGGAAATGTTGGTTTACGA-TA
gi|77413 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTTCA---TGACCCATCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCTGCAGTTGGAAAGTAACCGAATAGTCGGCCGGACCACATTACAA----CATAGTAAACTGCTATTATAAATTTGGATGTTCTTGCGAAT-T--------AATTATAACCGAAAAATGTTGATATACGA-TATA
gi|77414 : GTAACAT-TAA-ATTTTTACC------C--C-------------GT--------------TGAAAA----------------------------TTTCAACG--G------------A----TG----A---G----T------GA------T-C--AA-T----TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGTTATTAAA---TGACCCATCCACACGTGAAAAAATTGACCTTTTGTTAAAATCTGATCACCAACAGTTGGTAACTGACCAAATAAACGGCCGGACCACATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGATCTCGTGGATAAAAAGAGTGAATTATAACCGGAAAATGTTGGTATACGA-TATA
gi|77415 : GCAACAT-TAA-ATATTGACC------CAAT-------------GT--------------TGAAAA-T--------TTACCC---GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTAATC
gi|77416 : GTAACAT-TAA-ATTTTGACA------C--C-------------GT--------------TG-AAA-T--------TGA---CACGGGTC-AAATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATCagtgttaaat
gi|77417 : GTAATAT-TTA-ATTTTG-CC------C--C-------------GT--------------TGAATA----------TGACCACATGAGTC-ACATTATAACG--G------------A----TA----A---G----T------GA------T-C--CA-T----TTTT-----TT----CA----T-TGAAAA-CTGATCC-C-G--AC----CGTTTTTTAA---TGACCCACCTACACGTGAAAAG-TTGACCCTC-GTTGAAATCTGATCACCAACAATTTGAATCTGACCGAACAGTCGGCCGGACAACTTTTCAA----GATTGAAAACTGCTATAATAAATTCGGATGTTCTCGTGattgttaaat
gi|77418 : GTAACAT-TAA-ATTTTGACC------C--CGGAAAAAAATGGGGT--------------CGAAAA-T--------TGA---AACGGGTC-ACGTTTTAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77419 : GTAACAT-TAA-ATTTTGACC------C--G-------------GT--------------TGAAAA-A--------TGATCTCGTGTGTC-ACTTTTCAACG--G------------A----TG----G---G----T------GA------T-C--CA-T----TTTT-----AA----CA----T-TAAAAA-ATGACCC-C-G--AC----CGTTATATAA---AGACCCATCCACACGTGAAAAA-TTGACGCTC-GTTAAAACCTGATCATCAACAGTTGGAAACTGACCAAATAGTCGGCCATATCAT-TTTTAATAGTCATCGAAA
gi|77420 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TTACCCCAAGGGTCAACTTT--------G------------A------------------------------------C--AA-C----T--------------------T-TGAAAA-TTGACCCGC-GTCACATTTCGACATTAAATTCTGATCGAAACAGTCGTTAAAAA-CTGATCAGT-GTTAAATTTTGATCA
gi|77421 : GTAACAT-TAA-ATATTGACC------C--C-------------GT--------------TGAAAA-A--------TGAACCC--GGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AA----CAGTCGT-TGAAAA-CTGATC
gi|77422 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-T--------TGAACCCAAGGGTC-ATTTTTCAATGTTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTA-----AA----CA----T-TAAATT-CTGATC
gi|77423 : GTGACAT-CAA-ATTTTGACC------C--A-------------GT--------------TGAAAA-A--------TGACCCCAAAGATC-ATTTTTCAATGTTG------------A----AA----A---T----T------GA------C-CCGGG-TCCCATTTC-----AA----CA----T-TAAATT-CTGATCA-A-A--AC----AGTCGTTGAAAACTGACCaaaacagtcgttgaa
gi|77424 : GTTACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACCCACGGGTC-ATTTTTCAATG--
gi|77425 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TAAAAA-A--------TGAACTCAAGGGTC-ATTTTTCAATATTG------------A----AA----A---T----T------GACACGGGT-C--AC-A----TTTC-----AA----CA----T-TAAA
gi|77426 : GTAACAT-TAA-ATTCTGACC------C--C-------------GT--------------TGAAAA-A--------TAAC
gi|77427 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAATA-A--------TGATCCCAATGGTC-ATTTTTCGATGTTG------------A----AA----A---T----TTACCCGGG------T-C--AC-A----TTTC-----AA----CG----T-TAAATC-CTGATC
gi|77428 : GTAACAT-TAA-ACTTTGACC------C--C-------------GT--------------TGAATA-A--------TGACCCGAAGTGTC-ATTTTACAATGTTG------------A----AA----A---T----T------GATCCGGGT-C--AC-A----TTTC-----AA----CA----T-TAAGTT-CTGATCaaaacagtcgttgaa
gi|77429 : GTAACAT-TAA-ATTTTGACC------C--C-------------GTTGAAAATAGACCGTTGAAAA-A--------AGACCCCAAGGGTC-ATTTTTCAATGTTA------------AAAT-TG----ACCCG-----------GG------T-C--AC-A----TTTC-----AA----CA----T-TAAATT-CTGATCagaacagtcgttgaa
gi|77430 : GTAAAAT-TAA-ATTTTGACC------C----------------GT--------------TGAATA-A--------TGACGCCAAGGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------C-C--AA---------------AAAAGCCG----T-CGAAAA-CTGATCaaaacagtcgttgaa
gi|77431 : GTAACAC-TAA-ATTTATACC------C--C-------------GT--------------TGAAAA-T--------TGACCC---AGGTC-ACATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--A----------------AA----CAGCC-TATGAAAA-CTGATC
gi|77432 : GTAACAT-TAA-ATTTTGATC------C--C-------------AT--------------TAAGAA-T--------TGAACC---GGGTC-AGATTTCAAC----------------A----TT----A---AATTCT------GA------T-C--AA---------------AATAT-CG----T-TGAAAA-CTGATCattgttaaat
gi|77433 : GTAACACATA----TTTGACC------C--T-------------GT--------------TGGAAA-T--------TGACCC---GGGTC-ATATTTCAAC----------------AT---TG----A---ATTC-T------GA------T-C--AA---------------AA----CAAGCGT-TGAAAA-CCGATC
gi|77434 : AACAT-TTA-ATTTTGACC------C--C-------------GT--------------TGAAAATACTAAAAATTGACCC---GGATC-ACATTTCAAC
gi|77435 : GTAACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-AC-TTTCAACA--G------------A----TG----A---G----T------GA------T-C--AA-C----TTTT-----AA----
gi|77435 : T-TAA-AAGTTGATCACTCATC--T-------------GT--------------TGAAAG----------TGACCCATGGGGTC-ATTTTTCAACG--GGGTCAAAATTTAA----TGTTACA---G-----------GA------C-C--AC-A----TTTT-----AA----CA----T-TGAAAA-CTGaggaccacattttaacattgaaaactg
gi|77436 : -TAATATTTTGACC------C--T-------------GT--------------TGAATA-A--------TGACCCCATGGGTC-ACTTTTCACCG--A------------A----TG----A---G----T------GA------T-C--AA-A----TTTT-----AA----CA----T-TGAAAA-TTTATCC-C-T--AC----CGTTATTAAA---TGACCCACCCACACGTGAAAAT-TTGACCCTC-GTTAAAAT-TGATCA-CAATAGTTGGAAACTGACAGAATAGTCAGCCGGACGAGATTTCAA----CATTGAAAACTTATATTATAAATTTGGATGTTCTTATGGATAAAAAGTGAGAATTATAACCGGAAAATGTTGGTATGCGA-CATA
gi|77437 : AACAT-TAA-ATTTTGACC------C--C-------------GT--------------TGAAAA-A--------TAACCCAATGGGTC-ACTTTTCAACG--G------------
gi|77438 : GTAACAT-TTA-ATTTTAACC------C--T-------------GT--------------TGAAAA-A--------TGACCCCATGGGTC-ACTTTTCAACG--G------------
gi|77439 : GTC-ACTTTTCAACG--G------------A----TG----A---G----T------GA------TGC--A-------TTTT-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CGGT-TTTAA---TGACCCACCCATACGTGAAAAA-TTGATC---------------ATCACCAACAATTGGAAACTGACCGAATAGTCGGCCGGACCACATTTCAA----CTTTGATAACTGCTATTATAAATTTGGGTGTTCTCGTTGATATGAACTGTaccggcaaccgacc
gi|77440 : C-ACTTTTCAACG--G------------A----TG----A---G----T------GA------T-C--AAAT----TTTT-----AA----CA----T-TGAAAA-CTGACGC-C-A--AC----C-----------------CACTCTCACGTGAAAAA-TTGATCCTC-GTTAAAATCTGACCACCAACAGTTGGAAACTGGCCGAATAGTCGGCCGGATCACATTTCAA----CACTAAAAACTTATGTTATAAATTCGGA
gi|77441 : TTTTGAACG--G------------A----TG----A---A----T------GA------T-C--AA-T----TGTA-----AA----CA----T-TGAAAA-CTGACCC-C-G--AC----CTTTATTTGA---TGACCCACACACACTTTAAAAA-TTGACACCC-GTTGAAATCT-----------GTTGGAAACTGACCGTAAAGTCGGCCAGGCCACATTTCAA----CATTGAAAAC--ATATTATAAATTTTGATGTTCTCGTGGATATAAAGTGAGAATTATAACCGGAAAATGTTGGTATA-GATTATA
gi|77442 : A-T----TTTTGTTAGAT----CA----T-CAAATA-TTGACCC-CCG--AC----CGTTATTTAA---TAACCCACCCACACGTGAAAAA-TTGACCCTC-GTTAAAATCTGATCACCAACAGTTG----------GAATAGTCGGCCGGACCACATTTCAA----CATTGAAAACTGCTATTATAAATTTGGATGTACTCGTGGATGTAAA--GTGAATTATAACCGGAAAATGTTGATATACGA-TATA
gi|77443 : GGACCACATTTTAA----CATTGAAAACTGCTATTATAAAGTTGGCTGTTTTCGTGGATATAAAATGTGAATTTTAACC-GAAAATGTT-TTATACGA-TATA