lowQualScore : 1 1 1 3333 11 33333 444444 1 22 1 11 11111111 2222222 111111 11111
lowQualScore : 6 4 6 2 5 5 6666 99 5 88888 222222 2 5 1 6 6 5 5 2 00 0 44 3 1 22 888 2 1 1 33333333 33333 22222 3333333 555555 1 6666666 0 22 11 0 33 0 88888888 11111 33333333333 3 999 00 3333 1 666 1 6666 1 1 1 9999 444 66 222222 444444 111 22222 88 0 11 99999 66 0 44 1
lowQualScore : . . . . . . .... .. . ..... ...... . . . . . . . . .. . .. . . .. ... . . . ........ ..... ..... ....... ...... . ....... . .. .. . .. . ........ ..... ........... . ... .. .... . ... . .... . . . .... ... .. ...... ...... ... ..... .. . .. ..... .. . .. .
lowQualScore : 0 0 7 7 0 0 4444 33 7 11111 666666 1 7 4 0 0 7 7 1 77 7 66 7 8 77 666 7 3 3 44444444 11111 44444 9999999 222222 8 2222222 9 11 22 6 11 8 00000000 99999 66666666666 9 555 99 1111 1 999 1 4444 1 1 1 7777 111 55 222222 999999 555 00000 33 8 11 88888 44 8 55 0
consensus : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATAAACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-ATATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACG-GAAA-AAAACAACAG-A--AAACCCAATCATTATCTGC--TAACTTANTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGNGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATNC-----TAAT-T--TA--GGGGGTAAAATAAGCATTT-GGN------CA-----A-----------AAGCTT--A--TCTGG---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATNCTAATT-TA--GGGAGTA-----AAATANNCATTT-GGNCAAAAGCTTATCTGGA-GCACTG
Reference ( gi|126085 ) : CATGTTGAGTATTTCCAAGTATTTTAAA-GAGGCCTGCTTTAAACGAAACTGCATTACTTTAGCCGATTAGTTTATCGTATTTATT----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC--AAAA-AAAACAACAAAAC-AAACCCAATCATTATT--C--TAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGCGAGTTATTGATGCATGTATTACAAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-TGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGACAACCTCAAATCTGTATGAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAACTG--A--TCTGA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TAA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126082 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATAAACGAACCTGCATTACTTTAGCAGATTACTTTATCGTATTTATT----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGGAAAA-AAAACAACAGAA----ACCCAATCATTATCTGC--TAACTTAATCCAGTTCTTTACGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAATATTAACAGTGTCTGGTCAGAAGAAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTGA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TGA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126083 : CATGTTGAGTATT-CCAAGTGTTTTAAA-GAGGCCTGCTATAAACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATT----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACG-GAAA-AAAACAACAG----AAACCCAATCATTATCTGC--TAACTTAATCCAGTTCTTTAAGAA-AAA-CAATTCTCTCAAAAGTGAGTTATTGATTCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AG-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTTA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TGA---ATTTTAATT-TA--GGGTGTA-----AAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126084 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATAAACGAACCTGCATTATTTTAGCCGATTACTTTATCGTATTTATT----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACG-GAAA-AAAACAACAG----AAACCCAATCATTATCTGC--TAACTTAATCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGG------CAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--CA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTGA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TGA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-ATCCAAAAGCTTATCTGGA-GCACTG
gi|126087 : CATGTTGAGTATTTCCAAGTGTTTAAAA-GAGGCCTGCTATAAACGAACCTGCATTACTTTAGCCGATTACTTTATCATATTTATTTAATATAAATGGCATCGTCTGCTTCTAGCGTCGGAAGAC--GAAA-AAA-CAACAACAA-AAACCCAATCATTATC--TGATAACTTATTTCAGTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTATGATGTCACAAAA-AAATAAACAAAAAACAC--GGGAGGCAA-GGTCAATACAAATAACATTGAATCGTGGAAAGTAAAGTTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTA-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTG----GAGCACT-G---T-TT----C-
gi|126086 : CATGTTGAGTATTTCCAAGTGTTTAAAAAGAGGCCTGCTATAAATGAACCTGCATTACTTTAGCCGATTACTTTATCGTTTTTATTTGATATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC--AAAACAAAACAAC----CGAAACCCAATCATAATC--TGATAACTTATTCAACTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAATTCACAAAA-AA-TAAACAAAAAATACATGGGAGGCAAAGGTCAATACAAATACCATTGATTCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATAAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTT-----TAAT-T--TA--GGGAGTAAAAAAAGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTGG---A
gi|126088 : CATGTTGAGTATTTCCAAATGTTGAAAA-GAGGCCTGCTTTAAATGAACTTGAATTACTTTAGCCAATTACTTTATCGTATTTATTTAATATAAATGACATTGTCTGCTTCTGACGTCGGAAGAC--GAAA-AAAACA-CAACAG-AAACCCAATCATTAT---C--TGACTTATTCCAGTTCTTTAAGAATAAA-CGATACTCTCAAAAGTGAGTTATTGATGTATGTATTACGAAGTCACAAAAAAA-TAAACAAAAAACACACAGGAGGCAA-GGTCAATACAAATACCACTGAATCATGGAAAGTAAAGTTCCCATGGCTGAAAATAAATGAAATTAAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAA-GGGAAACTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTT-----TAAT-T--TA--GGGAGTAAAAGAGGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTG----GAGCACT-G---T-CT----C-A-C-CT----TC--CA
gi|126089 : AATGAACCTGCATTACTTTA-------------TCGTATTTATT----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC--AAAA-AAAAAAA-AAAAG-AAACCCAATCATTATT--C--TAATTTATTCAAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTTAATACAAATACCATTGAATCATGGAAAATAAAATTCCCATGGCTGATAATAAATGAAATTGAAGAAAACCTCAAATCTGT------------ATTAAAAGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------TCATTG-CATTT-----TAAT-T--AA--GGGTGTAAAATAAGCATTT-GAC------CA-----A-----------AAGCTG--A--TCTGA---AAATACT-C---T-TT----C-A-G-TT----TT--CATT--TT------AA------GCAT---TAA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126110 : ctatatcttAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTA-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTGG---A
gi|126090 : tAAACATTGA-AATTTCTG------AATAAA-GC--AATTTGATTAAAATATTTATTTTTAC-AG-TTA---A----C-----ATTT-----TGAAAAT-AA------GCATTG-CATAC-----CAGT-T--TA--AGGAGTAAAATACTCATTT-GAA------GA-----A-----------TAGCTT--A--TCTGG---Agcactg
gi|126114 : AGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAACTG--A--TCTGA---A
gi|126113 : AGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--CA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTGA---A
gi|126112 : AGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AG-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCT
gi|126111 : AGTGTCTGGTCAGAAGTAAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------TCATTG-CATTT-----TAAT-T--AA--GGGTGTAAAATAAGCATTT-GAC------CA-----A-----------AAGCTG--A--TCTGA---A
gi|126091 : aAGCATTTGGCCAAAAGT------TGA--TC--TGAAAATACTC---TTT-C-AA-TTT---T----C-----ATTT-----T-------AA------GCATTG-AATTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-AGC------CA-----A-----------AAGCTT--A--TCTGG---A
gi|126115 : AGTGTCTGGTCAGAAGTAAA-GGGAAACTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CATTT-----TAAT-T--TA--GGGAGTAAAAGAGGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTGG---A
gi|126100 : TAAA-TGGAAATTTGATAAGAATATTC---ATT------TTTACCCATAAC-----ATTT-----TGAAAAT-AA------GCATTG-TATGC-----TAAT-T--GA--AGGGGTAAAATAACCATAT-GAG------CA-----A-----------AAGCTT--A--TCTGG---Agcactg
gi|126108 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgtttTAAATGGCAA--TA--TAAGAATGTTCAT-TTT-T-AA-CCT---TAA--C-----ATTT-----TGAATAT-AA------GTAATG-CATAC-----TAAT-T--TA--AGGGGTAATATACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---Agcactg
gi|126101 : aagcattgaaatttaaattatggggtaaaataagcattctcaatttaagtgttgattagtttgtttTAAA-TGGCAATTTGATAAGAATGCTCAT-TTT-T-AC-CTT---CAA--C-----ATTT-----TGAATAT-AA------GCATTG-CATGC-----TTAT-T--AA--AGGGGTAAAGTACTCATTT-GA--------A-----A-----------AAGCTG--A--TCTgcactg
gi|126092 : atttctaaataaagcattgacattgaaattaagggggtaaaataaacattggttattctcaatagtttgtttTAAA-TGGAAATTTGATAAGAATATTC---ATT------TTTACCCATAAC-----ATTT-----TGAAAAT-AA------GCATTG-TATGC-----TAAT-T--GA--AGGGGTAAAATAACCATAT-GAG------CA-----A-----------AAGCTT--A--TCTGG---Atgagcactg
gi|126116 : AAA-GGTAAATTT--TGAAAATACTC---TTT-C-AA-TTT---C----C-----ATTT-----T-------AA------GCATTG-CGTTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTGA---A
gi|126094 : aAAA-GCTGA--TC--TGAAAATACTC---TTT-C-AG-TTT---T----C-----ATTT-----T-------AA------GCATTA-AATTT-----TAAT-T--TA--GGGAGTAAAATAAGCATTT-GGC------CA-----A-----------AAGCTT--A--TCTGG---A
gi|126093 : AAA-AGTTGATCT--T-AAAATACTC---TTT-C-AA-TTT---T----C-----ATTT-----T-------AA------GCATTG-AATTT-----TAAT-T--TA--GGGTGTAAAATAAGCATTT-AGC------CA-----A-----------AAGCTT--A--TCTG----GAGCACT-G---T-ACAAA-C-A-A-TT----TT--TGTC--TC------A--------CAT---T
gi|126117 : AATTTGATTAAAATATTTATTTTTAC-AG-TTA---A----C-----ATTT-----TGAAAAT-AA------GCATTG-CATAC-----CAGT-T--TA--AGGAGTAAAATACTCATTT-GAA------GA-----A-----------TAGCTT--A--TCTGG---A
gi|126109 : aaagcAATTTGATAAGAATGTTC---GTT------TTTA--C----C-----TTTTGAAAAT-------AA------GCATTG-CATGC-----TAAT-T--TA--GGG-GTATAATACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCTgcactg
gi|126095 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgatAATGT--TCAGATTACTC---TTT------TGC---C----C-----ATTT-----TTGAAAATAA------GCAATG-CATAC-----CAAT-T--TA--AGGGGTAAAATACTCATTT-GAA------TA-----A-----------AAACTT--A--TCTGA---Aagagcaatg
gi|126096 : AATTT--TGATAAGATT----TTT-C-AT-TTTTACC----CTGAAAATTT-----TGAAAAT-AA------GCACTG-CATAC-----TAAT-T--TA--AGGGGTAAAATACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCT
gi|126118 : AAAATACCC---T---C-AAGTTT---T----A-----ACTT-----T-------TA------GCATTG--ATTT-----TAAAAT--CA--GGGAGTAAAATACTCATTT-AGT------CA-----
gi|126119 : TATTG---TTT-C-CA-TTA---A----C-----ATTT-----T-------AAAAATAAGTATTG-CATAC-----TAAT-T--TA--AAGAGTAAAATACTCATCT-GGA------GA-----A-----------AAGCTT--A--TCTGG---AActtatttg
gi|126097 : TATTG---TTT-C-CA-TTA---A----C-----ATTT-----T-------AAAAATAAGTATTG-CATAC-----TAAT-T--TA--AAGAGTAAAATACTCATCT-GGA------GA-----A-----------AAGCTT--A--TCTGG---AAcattg
gi|126098 : TT-CGAA-TGT---T----C-----ATTT-----TGAAAAT-AA------GCATTG-CGCAC-----TAAT-T--TA--AGAAGTAAAATACCCATTT-GTA------GA-----A-----------AAGTTT--A--TCTGG---ATGCACT-T---TATT----C-A-
gi|126101 : A-TTT---C----T-----AAAT-----A-------AA------GCATTGACATTG-----AAAT-T--AA--GGGGGTAAAATAAACATT--GGTTATTCTCA-----ATAGTTTGTTTTAAATGGCAA--TTTGATAAGAATGCT-CAT-T-TT----T-A-C-CT----TCAACATT--TTGAATATAA------GCAT---TGC---ATGCTTATT-AA--AGGGGTA-----AAGTACTCATTT-GA--AAAAGCTGATCTTGA-GCACTG
gi|126099 : -----ATTT-----T-------AA------GCATTG-CATAT-----TAAT-T--TA--AGCGTTAAAATACTCATTTAAGA------GA-----A-----------AAGCTT--A--TCTGG---A
gi|126102 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaTT-----A-------AA------GCATTGTCATTCCTGAATAAT-TCCT-----GAGTAAAATAAGCATT--GGT------TA-----G----------------------TTTGA---AT-TACC-G---T---------A-A-T----------ATT--TTGAAAATAA------GCGT---TAC---ATACTAATT-TA--AGGGGTA-----AAATACTCATTT-GAAGAAAAGCTTATCAGGA-GCACTGgcac
gi|126120 : -----T-------AA------GCATTG-CATAC-----TAAT-T--TA--AGGGGTAAAATACTCATTT-GAA------AA-----A-----------AAACTT--A--TCTGG---A
gi|126104 : -----T-------AA------GCGTTA-CATAC-----TAAT-T--TA--AGGGGTAAAATACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCAG----GAGCACTGC---T-TT----C-ATA-TT----gcactg
gi|126121 : -----T-------AA------GCATTG-CATAC-----TAAT-T--TA--ACGGGTAAAACACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---A
gi|126122 : -----T-------AA------GCATTG-CATAC-----TTAT-T--TA--AAGAGTAAAATACTTATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---Agcactg
gi|126103 : -----T-------AA------GCATTG-CATAC-----TAAT-T--TA--AGGGGTAAAATACTCATTT-GAA------AA-----A-----------AAACTT--A--TCTGG---Agcactg
gi|126107 : -----T-------AA------GCATTG-CATGC-----TAAT-TG-TA--GGG-GTAAAGTACTCATAT-AAA------GA-----A-----------AAGCTT--A--TCT
gi|126105 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaa-----T-------AA------GCATTG-CATAC-----TAAT-T--TA--ACGGGTAAAACACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---Acgagcactg
gi|126106 : -----T-------AA------GCATTG-CATAC-----TTAT-T--TA--AAGAGTAAAATACTTATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---A
gi|126108 : -------AA------GCATTG-AAATT-----TAAA-T--TA--TGGGGTAAAATAAGCATT
gi|126123 : -------AA------GCATCG-CATAC-----TTAT-T--TAACGGGGGTAAAATACTCATTT-GAA------GA-----A-----------AAGCTT--A--TCTGG---Actcaatttaagtgttgattagtttgttttaaatggcaatataagaatgttcatttttaaccttaacattttgaatataagtaatgcatactaatttaaggggtaatatactcatttgaagaaaagcttatctggagcactg
gi|126107 : -------AA------GCATTG-AAATT-----TAAA-T--TA--AAGGATAAAATAAGCATTT-GGgcactg
gi|126124 : -----TAAT-T--TA--AGGGGTAAAATTCGCATTT-GAA------GA-----A-----------AAACTT--A--TCTGG---Attattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaataagcattgcatgctaattgtaggggtaaagtactcatataaagaaaagcttatctcgagcactg
gi|126082 : AGATAAGCTTTT-GGC------TA-----A-----------ATGCTT--A--TTT--------TACT-C---C-CT----A-A-A-TTAAAATT--CAATGCTT------AA------A-AT---GAA---A-----ATT-GA--AAGAGTATTTTCAGATCAACTTTT-GGCCAAATGCTTATTTgcactg
gi|126083 : catgttgagtatttccaagtgttttaaagaggcctgctataaacgaacctgcattactttagcagattactttatcgtatttattataaatggcatcgtctgcttctggcgtcggaagacggaaaaaaaacaacagaaacccaatcattatctgctaacttaatccagttctttacgaaaaacaatactctcaaaagtgagttattgatgcatatattacgaagtcacaaaaaatgaacaaaaaacacacgggtggcaaggtcaatagaaataccattgaatcatggaaagtaaaattcccatggctgataataaatggaattgaaggcaacctcaaatctgtattaaagcaaatattaacagtgtctggtcagaagaaaaggtaaattttgaaaatactctttcaatttccattttaagcattgcgttttaatttagggagtaAGATAAGCTTTT-GGC------TA-----A-----------ATGCTT--A--TTT--------TACA-C---C-CT----A-A-A-TTAAAATT--CAATGCTT------AA------A-AT---GAA---A-----ATT-GA--AAGAGTATTTTAAGATCAACTTTT-GGCCAAATGCTTATTTggagcactg
gi|126084 : catgttgagtattccaagtgttttaaagaggcctgctataaacgaacctgcattactttagccgattactttatcgtatttattataaatggcatcgtctgcttctggcgtcggaagacggaaaaaaacaacagaaacccaatcattatctgctaacttaatccagttctttaagaaaaacaattctctcaaaagtgagttattgattcatatattacgaagtcacaaaaaatgaacaaaaaacacacgggtggcaaggtcaatagaaataccattgaatcatggaaagtaaaattcccatggctgataataaatggaattgaaggcaacctcaaatctgtattaaagcaaacattaacagtgtctggtcagaagtaaaggtaaattttgaaaatactctttcagtttccattttaagcattgcgttttaatttagggagtaAGATAAGCTTTT-GGA------TA-----A-----------ATGCTT--A--TTT--------TACT-C---C-CT----A-A-A-TTAAAATT--CAATGCTT------AA------A-AT---GAA---A-----ATT-GA--AAGAGTATTTTCAGATCAACTTTT-GGCCAAATGCTTATTTggagcactg
gi|126089 : catgttgagtatttccaagtgttttaaagaggcctgctataaacgaacctgcattattttagccgattactttatcgtatttattataaatggcatcgtctgcttctggcgtcggaagacggaaaaaaacaacagaaacccaatcattatctgctaacttaatccagttctttaagaaaaacaatactctcaaaagtgagttattgatgcatatattacgaagtcacaaaaaatgaacaaaaaacacacgggtggcaaggtcaatagaaataccattgaatcatggaaagtaaaattcccatggctgataataaatggaattgaaggcaaatctgtattaaagcaaacattaacagtgtctggtcagaagtaaaggtaaattttgaaaatactctttcaatttccattttaagcattgcgttttaattcagggagtaAGATAAGCTTTT-GGC------CA-----A-----------ATGCTT--A--TTT--------TACT-C---C-CT----A-A-A-TT----AA--AATT--TA------AT------GCTT---AAA---ATGAAAACT-GA--AAGAGTATTTTCAGATCAGCTTTT-GGTCAAATGCTTATTTggagcactg
gi|126091 : ctatatcttaatgaacctgcattactttatcgtatttattataaatggcatcgtctgcttctggcgtcggaagacaaaaaaaaaaaaaaagaaacccaatcattattctaatttattcaagttctttaagaaaaacaatactctcaaaagtgagttattgatgcatgtattacgaagtcacaaaaaataaacaaaaaacacacgggaggcaaggttaatacaaataccattgaatcatggaaaataaaattcccatggctgataataaatgaaattgaagaaaacctcaaatctgtattaaaagtgtctggtcagaagtaaaggtaaattttgaaaatactctttcaatttccattttaatcattgcattttaattaagggtgtaAGATAAGCTTTT-GGC------TA-----A-----------ATGCTT--A--TTT--------TACT-C---C-CT----A-A-A-TTAAAATT--CAATGCTT------AA------A-AT---GAA---A-----ATT-GA--AAGAGTATTTTCAGATCAACTTTT-GGCCAAATGCTggagcactg
gi|126111 : AAGTGTCT-GGT------CAGAAGTA-----------AAGGTA--AATTTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------TCAT---TGC---ATTTTAATT-AA--GGGTGTA-----AAATAAGCATTT-GACCAAAAGCTGATCTGAA-gga
gi|126091 : AGCATTT-GGC------CA-----A-----------AAGTTG--A--TCTGA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TGA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-AGCCAAAAGCTTATCTGGA-
gi|126093 : A-----A-----------AAGTTG--A--TCTTA---AAATACT-C---T-TT----C-A-A-TT----TT--CATT--TT------AA------GCAT---TGA---ATTTTAATT-TA--GGGTGTA-----AAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126094 : -----A-----------AAGCTG--A--TCTGA---AAATACT-C---T-TT----C-A-G-TT----TT--CATT--TT------AA------GCAT---TAA---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGCTTATCTGGA-tacaaacaatttttgtctcacatt
gi|126088 : -----------AAACT-------TTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTTTAATT-TA--GGGAGTA-----AAAGAGGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126115 : catgttgagtatttccaaatgttgaaaagaggcctgctttaaatgaacttgaattactttagccaattactttatcgtatttatttaatataaatgacattgtctgcttctgacgtcggaagacgaaaaaaacacaacagaaacccaatcattatctgacttattccagttctttaagaataaacgatactctcaaaagtgagttattgatgtatgtattacgaagtcacaaaaaaataaacaaaaaacacacaggaggcaaggtcaatacaaataccactgaatcatggaaagtaaagttcccatggctgaaaataaatgaaattaaaggcaacctcaaatctgtattaaagcaaacattaacagtgtctggtcagaagtaaaggg-----------AAACT-------TTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTTTAATT-TA--GGGAGTA-----AAAGAGGCATTT-GGCCAAAAGCTTATCTGGA-GCACTGtctcaccttcca
gi|126117 : agtgtctggtcagaagtaaagggTG--A--TT--A---AAATATT-TATTT-TTA---C-A-G-TT----AA--CATT--TTGAAAATAA------GCAT---TGC---ATACCAGTT-TA--AGGAGTA-----AAATACTCATTT-GAAGAATAGCTTATCTGGA-GCACTG
gi|126090 : aaagcaattTG--A--TT--A---AAATATT-TATTT-TTA---C-A-G-TT----AA--CATT--TTGAAAATAA------GCAT---TGC---ATACCAGTT-TA--AGGAGTA-----AAATACTCATTT-GAAGAATAGCTTATCTGGA-
gi|126108 : aaacattgaaatttctgaataaagcaatt--A--TATAA---GAATGTT-CAT-T-TT----T-A-A-CC----TTAACATT--TT------GA------ATATAAGTAATGCATACTAATT-TA--AGGGGTA-----ATATACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126087 : aagcattgaaatttaaattatggggtaaaataagcattctcaatttaagtgttgattagtttgttttaaatggca--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTATAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126086 : catgttgagtatttccaagtgtttaaaagaggcctgctataaacgaacctgcattactttagccgattactttatcatatttatttaatataaatggcatcgtctgcttctagcgtcggaagacgaaaaaacaacaacaaaaacccaatcattatctgataacttatttcagttctttaagaaaaaacaatactctcaaaagtgagttattgatgcatgtattatgatgtcacaaaaaaataaacaaaaaacacgggaggcaaggtcaatacaaataacattgaatcgtggaaagtaaagttcccatggctgataataaatgaaattgaaggcaacctcaaatctgtattaaagcaaacattaacagtgcctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTTTAATT-TA--GGGAGTA-----AAAAAAGCATTT-GGCCAAAAGCTTATCTGGA-tttc
gi|126110 : catgttgagtatttccaagtgtttaaaaagaggcctgctataaatgaacctgcattactttagccgattactttatcgtttttatttgatataaatggcatcgtctgcttctggcgtcggaagacaaaacaaaacaaccgaaacccaatcataatctgataacttattcaacttctttaagaaaaaacaatactctcaaaagtgagttattgatgcatgtattacgaattcacaaaaaataaacaaaaaatacatgggaggcaaaggtcaatacaaataccattgattcatggaaagtaaaattcccatggctgataataaatgaaattgaaggcaacctcaaatctgtataaaagcaaacattaacagtgtctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTATAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126114 : taaagcaaacattaacagtgcctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---ATTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAACTGATCTGAA-
gi|126113 : agtgtctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---GTTTTAATT-CA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGTTGATCTGAA-
gi|126112 : agtgtctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-G-TT----TC--CATT--TT------AA------GCAT---TGC---GTTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGTTGATCT
gi|126116 : agtgtctggtcagaagtaaaggtaaat--TTTGA---AAATACT-C---T-TT----C-A-A-TT----TC--CATT--TT------AA------GCAT---TGC---GTTTTAATT-TA--GGGAGTA-----AAATAAGCATTT-GGCCAAAAGTTGATCTGAA-
gi|126118 : aaaaggtaaatA---AAATACC-C---T-------C-A-AGTT----TT--AACT--TT------TA------GCAT---TGA---TTTTAAAAT-CA--GGGAGTA-----AAATACTCATTT-AGTCA----CTTATTTG
gi|126119 : TATT-G---T-TT----C-C-A-TT----AA--CATT--TT------AAAAATAAGTAT---TGC---ATACTAATT-TA--AAGAGTA-----AAATACTCATCT-GGAGAAAAGCTTATCTGGA-ACATTG
gi|126095 : TACT-C---T-TTTGCCC-A-T-TT----TT--GAAA--AT------AA------GCAA---TGC---ATACCAATT-TA--AGGGGTA-----AAATACTCATTT-GAATAAAAACTTATCTGAA-
gi|126097 : aatgttcagatTATT-G---T-TT----C-C-A-TT----AA--CATT--TT------AAAAATAAGTAT---TGC---ATACTAATT-TA--AAGAGTA-----AAATACTCATCT-GGAGAAAAGCTTATCTGGA-
gi|126098 : -TT----CGA-A-TG----TT--CATT--TTGAAAATAA------GCAT---TGC---GCACTAATT-TA--AGAAGTA-----AAATACCCATTT-GTAGAAAAGTTTATCTGGATGCACTa
gi|126099 : ATT--TT------AA------GCAT---TGC---ATATTAATT-TA--AGCGTTA-----AAATACTCATTTAAGAGAAAAGCTTATCTGGA-GCACttattca
gi|126100 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaT------AA------GCAT---TGT---ATGCTAATT-GA--AGGGGTA-----AAATAACCATAT-GAGCAAAAGCTTATCTGGA-GCACTG
gi|126120 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaaT------AA------GCAT---TGC---ATACTAATT-TA--AGGGGTA-----AAATACTCATTT-GAAAAAAAACTTATCTGGA-GCACTG
gi|126104 : T------AA------GCGT---TAC---ATACTAATT-TA--AGGGGTA-----AAATACTCATTT-GAAGAAAAGCTTATCAGGA-GCACTG
gi|126121 : T------AA------GCAT---TGC---ATACTAATT-TA--ACGGGTA-----AAACACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTGctttcatatt
gi|126122 : T------AA------GCAT---TGC---ATACTTATT-TA--AAGAGTA-----AAATACTTATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126103 : T------AA------GCAT---TGC---ATACTAATT-TA--AGGGGTA-----AAATACTCATTT-GAAAAAAAACTTATCTGGA-
gi|126109 : T------AA------GCAT---TGC---ATGCTAATT-TA--GGG-GTA-----TAATACTCATTT-GAAGAAAAGCTTATCTAGA-GCAATG
gi|126092 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaaT------AA------GCAT---TGT---ATGCTAATT-GA--AGGGGTA-----AAATAACCATAT-GAGCAAAAGCTTATCTGGA-
gi|126107 : taaatggaaatttgataagaatattcatttttacccataacattttgaaaaT------AA------GCAT---TGC---ATGCTAATTGTA--GGG-GTA-----AAGTACTCATAT-AAAGAAAAGCTTATCTCGA-GCACTG
gi|126105 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaaT------AA------GCAT---TGC---ATACTAATT-TA--ACGGGTA-----AAACACTCATTT-GAAGAAAAGCTTATCTGGA-
gi|126096 : T------AA------GCAC---TGC---ATACTAATT-TA--AGGGGTA-----AAATACTCATTT-GAAGAAAAGCTTATCT
gi|126106 : aattttgataagatttttcatttttaccctgaaaattttgaaaaT------AA------GCAT---TGC---ATACTTATT-TA--AAGAGTA-----AAATACTTATTT-GAAGAAAAGCTTATCTGGA-
gi|126123 : ------AA------GCAT---CGC---ATACTTATT-TAACGGGGGTA-----AAATACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126124 : TAATT-TA--AGGGGTA-----AAATTCGCATTT-GAAGAAAAACTTATCTGGA-GCACTG
gi|126125 : AATT-TA--AGGAGTA-----AAATACTCGTTC-AAAGAAAAGCTTATCTGGA-GCATTG
gi|126087 : -----AGATAAGCTTTT-GGCCAAATGCTTATTT
gi|126110 : catgttgagtatttccaagtgtttaaaagaggcctgctataaacgaacctgcattactttagccgattactttatcatatttatttaatataaatggcatcgtctgcttctagcgtcggaagacgaaaaaacaacaacaaaaacccaatcattatctgataacttatttcagttctttaagaaaaaacaatactctcaaaagtgagttattgatgcatgtattatgatgtcacaaaaaaataaacaaaaaacacgggaggcaaggtcaatacaaataacattgaatcgtggaaagtaaagttcccatggctgataataaatgaaattgaaggcaacctcaaatctgtattaaagcaaacattaacagtgcctggtcagaagtaaaggtaaattttgaaaatactctttcaatttccattttaagcattgcattataatttagggagta-----AGATAAGCTTTT-GGCCAAATGCTTATTTggagcactgtttc
gi|126094 : taaagcaaacattaacagtgcctggtcagaagtaaaggtaaattttgaaaatactctttcaatttccattttaagcattgcattataatttagggagta-----AGATAAGCTTTT-GGCCAAATGCTTATTTggagcactg
Alignments
lowQualScore : 1111 44444 1111 1 111 111111 111111111111111111 111 2222222 111
lowQualScore : 1 5 0000 88888 99 5 5 2222 9 3 2 1 5 5 5 0 1 5 88 222 8888 55555 44444 444444 3 9999999 22 1 1 4444444 3 222 5555555 1 2 222222222222222222 77777777 55 2 2 111 5555555 777777 1 1 1 222 2 22 1 000 1
lowQualScore : . . .... ..... .. . . .... . . . . . . . . . . .. ... .... ..... ..... ...... . ....... .. . . ....... . ... ....... . . .................. ........ .. . . ... ....... ...... . . . ... . .. . ... .
lowQualScore : 0 7 6666 66666 22 0 0 2222 4 2 5 0 0 0 0 0 0 0 77 555 5555 00000 88888 444444 3 0000000 33 4 5 8888888 0 777 4444444 5 6 000000000000000000 66666666 88 0 1 666 6666666 222222 0 2 2 000 0 00 2 111 2
consensus : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAG-AA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCAC-AAAAAATAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGCTNATCT-----GG-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGCATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
Reference ( family-507 ) : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTANTCCAGTTCTTTAAG-AA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCAC-AAAAAATGAACAAAAAACACACGGGNGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATNC-----TAATT--TAGGGGGTAAAATAA-GC-------A-TTTG---GN------CAAA-AGCTTATCT-----GG-----------AAATAC--------TC--TTTC-AA-TTTC--CATTTT-------AA------GCATTGCATNCTAAT-T-TA--GGGAGTAAAATANNCATTT-GGNCAAAAGCTTATCTGGA-GCACTG
gi|126082 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCAGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGGAAAAAA-A-ACAACAG---AAACCCAATCATTATCTGCTAACTTAATCCAGTTCTTTACG-AA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCAC-AAAAAATGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAATATTAACAGTGTCTGGTCAGAAGAAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----GA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126083 : CATGTTGAGTATT-CCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAG-AA-AAA-CAATTCTCTCAAAAGTGAGTTATTGATTCATATATTACGAAGTCAC-AAAAAATGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAGTTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----TA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGAATTTTAAT-T-TA--GGGTGTAAAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126084 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTATTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAG-AA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCAC-AAAAAATGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAA------ATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--CAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----GA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-ATCCAAAAGCTTATCTGGA-GCACTG
gi|126085 : CATGTTGAGTATTTCCAAGTATTTTAAA-GAGGCCTGCTTTA----AACGAAACTGCATTACTTTAGCCGATTAGTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACA--AAAAA-A-ACAACAAAACAAACCCAATCATTATT--CTAACTTATTCCAGTTCTTTAAG-AA-AAA-CAATACTCTCAAAAGCGAGTTATTGATGCATGTATTACAAAGTCAC-AAAAAATAAACAAAAAACACACGGGAGGCAA-TGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGACAACCTCAAATCTGTATGAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AACTGATCT-----GA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTAAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126086 : CATGTTGAGTATTTCCAAGTGTTTAAAAAGAGGCCTGCTATA----AATGAACCTGCATTACTTTAGCCGATTACTTTATCGTTTTTATTTGA-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AACAA-A-ACAACCGA--AA-CCCAATCATAATCTGATAACTTATTCAACTTCTTTAAG-AA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAATTCAC-AAAAAATAAACAAAAAATACATGGGAGGCAAAGGTCAATACAAATACCATTGATTCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATAAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAAAAA-GC-------A-TTTG---GC------CAAA-AGCTTATCT-----GG-----------A
gi|126087 : CATGTTGAGTATTTCCAAGTGTTTAAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCATATTTATTT-AATATAAATGGCATCGTCTGCTTCTAGCGTCGGAAGACGA-AAAAACA-ACAACA-A--AAACCCAATCATTATCTGATAACTTATTTCAGTTCTTTAAGAAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTATGATGTCACAAAAAAATAAACAAAAA--ACACGGGAGGCAA-GGTCAATACAAATAACATTGAATCGTGGAAAGTAAAGTTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGCTTATCT-----GG------------AGCAC--------TG--TTTC-
gi|126088 : CATGTTGAGTATTTCCAAATGTTGAAAA-GAGGCCTGCTTTA----AATGAACTTGAATTACTTTAGCCAATTACTTTATCGTATTTATTTAA-TATAAATGACATTGTCTGCTTCTGACGTCGGAAGACGA-AAAAA-ACACAACAG---AAACCCAATCATTATCTG---ACTTATTCCAGTTCTTTAAG-AATAAA-CGATACTCTCAAAAGTGAGTTATTGATGTATGTATTACGAAGTCACAAAAAAATAAACAAAAAACACACAGGAGGCAA-GGTCAATACAAATACCACTGAATCATGGAAAGTAAAGTTCCCATGGCTGAAAATAAATGAAATTAAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAAGAG-GC-------A-TTTG---GC------CAAA-AGCTTATCT-----GG------------AGCAC--------TG--TCTC-AC-CTTC--CA
gi|126089 : CTATATCTTAATGAACCTGCATTACTTTA-------------TCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AAAAA-A-AAAAAAAG--AAACCCAATCATTATT--CTAATTTATTCAAGTTCTTTAAG-AA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCAC-AAAAAATAAACAAAAAACACACGGGAGGCAA-GGTTAATACAAATACCATTGAATCATGGAAAATAAAATTCCCATGGCTGATAATAAATGAAATTGAAGAAAACCTCAAATCTGTATTAAA------------AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAATT--AAGGGTGTAAAATAA-GC-------A-TTTG---AC------CAAA-AGCTGATCT-----GA-----------AAATAC--------TC--TTTC-AG-TTTT--CATTTT-------AA------GCATTAAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-GGCCAAAAGCTTATCTGGA-GCACTG
gi|126090 : AATAAAGC-------AATTTG---AT------TAAA-A---TATTT----------------------AT--------TT--TTAC-AG-TTAA--CATTTTGAAAAT-AA------GCATTGCATACCAGT-T-TA--AGGAGTAAAATACTCATTT-GAAGAATAGCTTATCTGGA-
gi|126091 : aaacattgaaatttctgA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----GA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-AGCCAAAAGCTTATCTGGA-
gi|126092 : TAAATGGAAATTTGATAAGAATATTCATT---TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAATT--GAAGGGGTAAAATAA-CC-------A-TATG---AG------CAAA-AGCTTATCT-----GG-----------A
gi|126092 : T-------AA------GCATTGTATGCTAAT-T-GA--AGGGGTAAAATAACCATAT-GAGCAAAAGCTTATCTGGA-
gi|126093 : taaatggaaatttgataagaatattcatttttacccataacattttgaaaaAAA-AGTTGATCT-----TA-----------AAATAC--------TC--TTTC-AA-TTTT--CATTTT-------AA------GCATTGAATTTTAAT-T-TA--GGGTGTAAAATAAGCATTT-AGCCAAAAGCTTATCTGGA-GCACTG
gi|126094 : AA-AGCTGATCT-----GA-----------AAATAC--------TC--TTTC-AG-TTTT--CATTTT-------AA------GCATTAAATTTTAAT-T-TA--GGGAGTAAAATAAGCATTT-GGCCAAAAGCTTATCTGGA-tacaaacaatttttgtctcacatt
gi|126095 : TAC--------TC--TTT-----TGCC--CATTTTTGAAAATAA------GCAATGCATACCAAT-T-TA--AGGGGTAAAATACTCATTT-GAATAAAAACTTATCTGAA-
gi|126096 : aatgttcagatAATTT--TGATAAGATT-TTTCATTTTTACC----CTGAAAATTT-----TGAAAATAAGCACTG-CATAC-----TAATT--TAAGGGGTAAAATAC-TC-------A-TTTG---AA------GAAA-AGCTTATCT-----
gi|126096 : T-------AA------GCACTGCATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAGAAAAGCTTATCT
gi|126097 : aattttgataagatttttcatttttaccctgaaaattttgaaaaTAT--------TG--TTTC-CA-TTAA--CATTTT-------AAAAATAAGTATTGCATACTAAT-T-TA--AAGAGTAAAATACTCATCT-GGAGAAAAGCTTATCTGGA-
gi|126098 : TTCGAA-TGTT--CATTTTGAAAAT-AA------GCATTGCGCACTAAT-T-TA--AGAAGTAAAATACCCATTT-GTAGAAAAGTTTATCTGGATGCACTa
gi|126099 : ATTTT-------AA------GCATTGCATATTAAT-T-TA--AGCGTTAAAATACTCATTTAAGAGAAAAGCTTATCTGGA-GCACttattca
gi|126100 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaTAAATGGAAATTTGATAAGAATATTCATT---TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAATT--GAAGGGGTAAAATAA-CC-------A-TATG---AG------CAAA-AGCTTATCT-----GG-----------A
gi|126100 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgtttT-------AA------GCATTGTATGCTAAT-T-GA--AGGGGTAAAATAACCATAT-GAGCAAAAGCTTATCTGGA-GCACTGgcactg
gi|126101 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaaATTT---C----T-----AAAT-----A------AAGCATTGACATTG-----AAATT--AAGGGGGTAAAATAA-AC-------A-TT-G---GTTATTCTCAAT-AGTTTGTTTTAAATGGCAATTTGATAAGAATGC--------TCATTTTT-AC-CTTCAACATTTTGAATAT-AA------GCATTGCATGCTTAT-T-AA--AGGGGTAAAGTACTCATTT-GA--AAAAGCTGATCTTGA-GCACTG
gi|126102 : TT-----A------AAGCATTGTCATTCCTGAATAATTCCT---GAGTAAAATAA-GC-------A-TT-G---GT------TA----GTTT----------G-----------AATTAC--------CG--T----AA-T------ATTTTGAAAAT-AA------GCGTTACATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAGAAAAGCTTATCAGGA-GCACTG
gi|126103 : T-------AA------GCATTGCATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAAAAAAACTTATCTGGA-
gi|126104 : T-------AA------GCGTTACATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAGAAAAGCTTATCAGGA-GCACTG
gi|126105 : T-------AA------GCATTGCATACTAAT-T-TA--ACGGGTAAAACACTCATTT-GAAGAAAAGCTTATCTGGA-ctttcatatt
gi|126106 : T-------AA------GCATTGCATACTTAT-T-TA--AAGAGTAAAATACTTATTT-GAAGAAAAGCTTATCTGGA-
gi|126107 : ------AAGCATTG-AAATT-----TAAAT--TAAAGGATAAAATAA-GC-------A-TTTG---GT------TA
gi|126107 : T-------AA------GCATTGCATGCTAAT-TGTA--GGG-GTAAAGTACTCATAT-AAAGAAAAGCTTATCTCGA-GCACTGttcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaataagcattgcatgctaattgtaggggtaaagtactcatataaagaaaagcttatctcgagcactg
gi|126108 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaa------AAGCATTG-AAATT-----TAAAT--TATGGGGTAAAATAA-GCATTCTCAA-TTTAAGTGT------TGATTAGTTTGTTTTAAATGG-----------CAATATAAGAATGTTCATTTTT-AA-CCTTAACATTTTGAATAT-AA------GTAATGCATACTAAT-T-TA--AGGGGTAATATACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126109 : ------AAGCATTG-AAATT-----TAAAT--TAAGGGGTAAAATAA-AC-------A-TT
gi|126109 : AATTTGATAAGAATGTTCGTT---TTTA--C----C-----TTTTGAAAAT------AAGCATTG-CATGC-----TAATT--TA-GGGGTATAATAC-TC-------A-TTTG---AA------GAAA-AGCTTATCT-----AG-----------Aggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaataagcattgcatgctaatttaggggtataatactcatttgaagaaaagcttatctagagcaatg
gi|126109 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgatT-------AA------GCATTGCATGCTAAT-T-TA--GGG-GTATAATACTCATTT-GAAGAAAAGCTTATCTAGA-GCAATGgcaatg
gi|126110 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaaTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGCTTATCT-----GG-----------A
gi|126111 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAATT--AAGGGTGTAAAATAA-GC-------A-TTTG---AC------CAAA-AGCTGATCT-----GA-----------Agcactg
gi|126112 : aAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAGTTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----
gi|126113 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--CAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----GA-----------A
gi|126114 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AACTGATCT-----GA-----------A
gi|126115 : AGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAATT--TAGGGAGTAAAAGAG-GC-------A-TTTG---GC------CAAA-AGCTTATCT-----GG-----------A
gi|126116 : AAAGGTAAATTT--TGAAAATACTCTTTCAATTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAATT--TAGGGAGTAAAATAA-GC-------A-TTTG---GC------CAAA-AGTTGATCT-----GA-----------Agcactg
gi|126117 : aAA-GC-------AATTTG---AT------TAAA-A---TATTT----------------------AT--------TT--TTAC-AG-TTAA--CATTTTGAAAAT-AA------GCATTGCATACCAGT-T-TA--AGGAGTAAAATACTCATTT-GAAGAATAGCTTATCTGGA-GCACTG
gi|126118 : a-----------AAATAC--------CC--T--C-AAGTTTT--AACTTT-------TA------GCATTG-ATTTTAAAAT-CA--GGGAGTAAAATACTCATTT-AGTCA----CTTATTTG
gi|126119 : aTAT--------TG--TTTC-CA-TTAA--CATTTT-------AAAAATAAGTATTGCATACTAAT-T-TA--AAGAGTAAAATACTCATCT-GGAGAAAAGCTTATCTGGA-ACATTG
gi|126120 : T-------AA------GCATTGCATACTAAT-T-TA--AGGGGTAAAATACTCATTT-GAAAAAAAACTTATCTGGA-GCACTG
gi|126121 : T-------AA------GCATTGCATACTAAT-T-TA--ACGGGTAAAACACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126122 : T-------AA------GCATTGCATACTTAT-T-TA--AAGAGTAAAATACTTATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126123 : -------AA------GCATCGCATACTTAT-T-TAACGGGGGTAAAATACTCATTT-GAAGAAAAGCTTATCTGGA-GCACTG
gi|126124 : TAAT-T-TA--AGGGGTAAAATTCGCATTT-GAAGAAAAACTTATCTGGA-GCACTG
gi|126125 : AAT-T-TA--AGGAGTAAAATACTCGTTC-AAAGAAAAGCTTATCTGGA-GCATTG
Alignments
lowQualScore : 1111 44444 1 1 111111 111111111111 1111 1111 222222
lowQualScore : 1 5 0000 88888 99 5 5 0 66 5 3 2 0 5 0 5 5 0 5 77 1 999 6666 33333 33333 111111 2 33333 1 11 0 888888888888888 1 1 222 444444 444444 1 33333 000000000000 2222 1111 2 777 333333 777777 11 1 33 1
lowQualScore : . . .... ..... .. . . . .. . . . . . . . . . . .. . ... .... ..... ..... ...... . ..... . .. . ............... . . ... ...... ...... . ..... ............ .... .... . ... ...... ...... .. . .. .
lowQualScore : 0 7 6666 66666 22 0 0 2 99 5 2 5 8 0 0 0 0 8 0 55 5 666 5555 88888 77777 555555 7 33333 3 88 4 111111111111111 3 3 333 333333 333333 0 66666 444444444444 6666 5555 4 888 888888 999999 88 3 77 4
consensus : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
Reference ( family-507 ) : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126082 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCAGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGGAAAAAA-A-ACAACAG---AAACCCAATCATTATCTGCTAACTTAATCCAGTTCTTTACGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAATATTAACAGTGTCTGGTCAGAAGAAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126083 : CATGTTGAGTATT-CCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATTCTCTCAAAAGTGAGTTATTGATTCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----TA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGTGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126084 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTATTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAA------ATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTTAT-CC--AAAAGCTTATCTGGA-GCACTG
gi|126085 : CATGTTGAGTATTTCCAAGTATTTTAAA-GAGGCCTGCTTTA----AACGAAACTGCATTACTTTAGCCGATTAGTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACA--AAAAA-A-ACAACAAAACAAACCCAATCATTATT--CTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGCGAGTTATTGATGCATGTATTACAAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-TGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGACAACCTCAAATCTGTATGAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126086 : CATGTTGAGTATTTCCAAGTGTTTAAAAAGAGGCCTGCTATA----AATGAACCTGCATTACTTTAGCCGATTACTTTATCGTTTTTATTTGA-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AACAA-A-ACAACCGA--AA-CCCAATCATAATCTGATAACTTATTCAACTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAATTCACAAAA-AA-TAAACAAAAAATACATGGGAGGCAAAGGTCAATACAAATACCATTGATTCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATAAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------AAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126087 : CATGTTGAGTATTTCCAAGTGTTTAAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCATATTTATTT-AATATAAATGGCATCGTCTGCTTCTAGCGTCGGAAGACGA-AAAAACA-ACAACA-A--AAACCCAATCATTATCTGATAACTTATTTCAGTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTATGATGTCACAAAA-AAATAAACAAAAAACAC--GGGAGGCAA-GGTCAATACAAATAACATTGAATCGTGGAAAGTAAAGTTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TTT----C-
gi|126088 : CATGTTGAGTATTTCCAAATGTTGAAAA-GAGGCCTGCTTTA----AATGAACTTGAATTACTTTAGCCAATTACTTTATCGTATTTATTT-AATATAAATGACATTGTCTGCTTCTGACGTCGGAAGACGA-AAAAA-ACACAACAGA--AA-CCCAATCATTATCTG---ACTTATTCCAGTTCTTTAAGAATAAA-CGATACTCTCAAAAGTGAGTTATTGATGTATGTATTACGAAGTCACAAAAAAA-TAAACAAAAAACACACAGGAGGCAA-GGTCAATACAAATACCACTGAATCATGGAAAGTAAAGTTCCCATGGCTGAAAATAAATGAAATTAAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TCT----C-ACCTTC--CA
gi|126089 : CTATATCTTAATGAACCTGCATTACTTTA-------------TCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AAAAA-A-AAAAAAAG--AAACCCAATCATTATT--CTAATTTATTCAAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTTAATACAAATACCATTGAATCATGGAAAATAAAATTCCCATGGCTGATAATAAATGAAATTGAAGAAAACCTCAAATCTGTATTAAA------------AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------AAATACTC---TTT----C-AGTTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126090 : AA---------------TAAAGCAATT---TGAT------T------AAAA---TATTT----------------------ATTT---TTA----C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-
gi|126091 : aaacattgaaatttctgAGCATTTGGCCAAAAGT-----TGA--TC--TGAAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : T------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-
gi|126093 : taaatggaaatttgataagaatattcatttttacccataacattttgaaaaAAAAGTTGATCT--T-AAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGTGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TACAAA-C-AATTTT--TGTCTC------A--------CATT
gi|126094 : AAAGCTGA--TC--TGAAAATACTCTTTCAG-TTT---T----C-----ATTT-----T------AAGCATTA-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126095 : TACTC---TTTTGCCC-ATTTTT--GAAAAT------AA------GCAATGCATACCAATTTAA--GGGGTAAAATACTCATTTGA-AT--AAAAACTTATCTGAA-
gi|126096 : aatgttcagatAATTT--TGATAAGATT-TTTCAT-TTTTACC----CTGAAAATTT-----TGAAAATAAGCACTG-CATAC-----TAAT-T--TAAGGGGTAAAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----
gi|126096 : T------AA------GCACTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCT
gi|126097 : aattttgataagatttttcatttttaccctgaaaattttgaaaaTATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-
gi|126098 : TT----CGAATGTT--CATTTTGAAAATAA------GCATTGCGCACTAATTTAA--GAAGTAAAATACCCATTTGT-AG--AAAAGTTTATCTGGATGCACTa
gi|126099 : AA-TTT---C----T-----GAAT-----T------AGGCATTG-AAATT-----TAAA-T--TAAGAAGTAAAA---------------TAA-GCA-TT---ttattca
gi|126099 : ATTTT------AA------GCATTGCATATTAATTTAA--GCGTTAAAATACTCATTTAAGAG--AAAAGCTTATCTGGA-GCACggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaattttaagcattgcatattaatttaagcgttaaaatactcatttaagagaaaagcttatctggagcac
gi|126100 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaAA-TTT---C----T-----GAAT-----A------AAGCATTG-AAATT-----TAAA-T--TAAGG-GTAAAA---------------TAA-GCA-TT---
gi|126100 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------Aggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaataagcattgtatgctaattgaaggggtaaaataaccatatgagcaaaagcttatctggagcactg
gi|126100 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgtttT------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-GCACTGgcactg
gi|126101 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaaA-TTT---C----T-----AAAT-----A------AAGCATTGACATTG-----AAAT-T--AAGGGGGTAAAA---------------TAA-ACA-TT----GGTTATTCTC------AATAGTTTGTTTTAAATGGCAATTTGATAAGAATGCTCAT-TTT----T-ACCTTCAACATTTTGAATATAA------GCATTGCATGCTTATTAAA--GGGGTAAAGTACTCATTTGA-----AAAAGCTGATCTTGA-GCACTG
gi|126102 : TT-----A------AAGCATTGTCATTCCTGAATAAT-TCCT---GAGTAAAA---------------TAA-GCA-TT-----------------------GGTTAGTTT-----G------------AATTACCG---T--------AAT------ATTTTGAAAATAA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126103 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-
gi|126104 : T------AA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126105 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-ctttcatatt
gi|126106 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-
gi|126107 : ------AAGCATTG-AAATT-----TAAA-T--TAAAGGATAAAA---------------TAA-GCA-TT---TGG
gi|126107 : T------AA------GCATTGCATGCTAATTGTA--GGGGTAAAGTACTCATATAA-AG--AAAAGCTTATCTCGA-GCACTGttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaataagcattgcatgctaattgtaggggtaaagtactcatataaagaaaagcttatctcgagcactg
gi|126108 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaa------AAGCATTG-AAATT-----TAAA-T--TATGGGGTAAAATAAGCATTCTCAATTTAA-GTG-TTGATTAGT------TTGTTTTAAATGGCAATAT-----AA-----------GAATGTTCAT-TTT----T-AACCTTAACATTTTGAATATAA------GTAATGCATACTAATTTAA--GGGGTAATATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126109 : ------AAGCATTG-AAATT-----TAAA-T--TAAGGGGTAAAA---------------TAA-ACA-TT---
gi|126109 : AATTTGATAAGAATGTTCGTT----TTTA--C----C-----TTTTGAAAAT------AAGCATTG-CATGC-----TAAT-T--TAGGG-GTATAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----AG-----------Aggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaataagcattgcatgctaatttaggggtataatactcatttgaagaaaagcttatctagagcaatg
gi|126109 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgatT------AA------GCATTGCATGCTAATTTA---GGGGTATAATACTCATTTGA-AG--AAAAGCTTATCTAGA-GCAATGgcaatg
gi|126110 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaaTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126111 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------Agcactg
gi|126112 : aAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----
gi|126113 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------A
gi|126114 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------A
gi|126115 : AGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126116 : AAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------Agcactg
gi|126117 : aAAAGC-AATTT-----GATTA--------AAATATTTATTTTTA---C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-GCACTG
gi|126118 : AAAATACCCT--CAAGTTT---T----A-----ACTT-----T------TAGCATTG--ATTT-----TAAAAT--CAGGGAGTAAAA---------------TAC-TCA-TT---TAGT------C------A----CTTATTT-----G
gi|126119 : TATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-ACATTG
gi|126120 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-GCACTG
gi|126121 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126122 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126123 : ------AA------GCATCGCATACTTATTTAACGGGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126124 : TAATTTAA--GGGGTAAAATTCGCATTTGA-AG--AAAAACTTATCTGGA-GCACTG
gi|126125 : AATTTAA--GGAGTAAAATACTCGTTCAA-AG--AAAAGCTTATCTGGA-GCATTG
Alignments
lowQualScore : 1111 44444 1 1 111111 111111111111 1111 1111 222222
lowQualScore : 1 5 0000 88888 99 5 5 0 66 5 3 2 0 5 0 5 5 0 5 77 1 999 6666 33333 33333 111111 2 33333 1 11 0 888888888888888 1 1 222 444444 444444 1 33333 000000000000 2222 1111 2 777 333333 777777 11 1 33 1
lowQualScore : . . .... ..... .. . . . .. . . . . . . . . . . .. . ... .... ..... ..... ...... . ..... . .. . ............... . . ... ...... ...... . ..... ............ .... .... . ... ...... ...... .. . .. .
lowQualScore : 0 7 6666 66666 22 0 0 2 99 5 2 5 8 0 0 0 0 8 0 55 5 666 5555 88888 77777 555555 7 33333 3 88 4 111111111111111 3 3 333 333333 333333 0 66666 444444444444 6666 5555 4 888 888888 999999 88 3 77 4
consensus : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
Reference ( family-507 ) : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126082 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCAGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGGAAAAAA-A-ACAACAG---AAACCCAATCATTATCTGCTAACTTAATCCAGTTCTTTACGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAATATTAACAGTGTCTGGTCAGAAGAAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126083 : CATGTTGAGTATT-CCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATTCTCTCAAAAGTGAGTTATTGATTCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----TA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGTGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126084 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTATTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAA------ATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTTAT-CC--AAAAGCTTATCTGGA-GCACTG
gi|126085 : CATGTTGAGTATTTCCAAGTATTTTAAA-GAGGCCTGCTTTA----AACGAAACTGCATTACTTTAGCCGATTAGTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACA--AAAAA-A-ACAACAAAACAAACCCAATCATTATT--CTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGCGAGTTATTGATGCATGTATTACAAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-TGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGACAACCTCAAATCTGTATGAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126086 : CATGTTGAGTATTTCCAAGTGTTTAAAAAGAGGCCTGCTATA----AATGAACCTGCATTACTTTAGCCGATTACTTTATCGTTTTTATTTGA-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AACAA-A-ACAACCGA--AA-CCCAATCATAATCTGATAACTTATTCAACTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAATTCACAAAA-AA-TAAACAAAAAATACATGGGAGGCAAAGGTCAATACAAATACCATTGATTCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATAAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------AAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126087 : CATGTTGAGTATTTCCAAGTGTTTAAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCATATTTATTT-AATATAAATGGCATCGTCTGCTTCTAGCGTCGGAAGACGA-AAAAACA-ACAACA-A--AAACCCAATCATTATCTGATAACTTATTTCAGTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTATGATGTCACAAAA-AAATAAACAAAAAACAC--GGGAGGCAA-GGTCAATACAAATAACATTGAATCGTGGAAAGTAAAGTTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TTT----C-
gi|126088 : CATGTTGAGTATTTCCAAATGTTGAAAA-GAGGCCTGCTTTA----AATGAACTTGAATTACTTTAGCCAATTACTTTATCGTATTTATTT-AATATAAATGACATTGTCTGCTTCTGACGTCGGAAGACGA-AAAAA-ACACAACAGA--AA-CCCAATCATTATCTG---ACTTATTCCAGTTCTTTAAGAATAAA-CGATACTCTCAAAAGTGAGTTATTGATGTATGTATTACGAAGTCACAAAAAAA-TAAACAAAAAACACACAGGAGGCAA-GGTCAATACAAATACCACTGAATCATGGAAAGTAAAGTTCCCATGGCTGAAAATAAATGAAATTAAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TCT----C-ACCTTC--CA
gi|126089 : CTATATCTTAATGAACCTGCATTACTTTA-------------TCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACAA-AAAAA-A-AAAAAAAG--AAACCCAATCATTATT--CTAATTTATTCAAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTTAATACAAATACCATTGAATCATGGAAAATAAAATTCCCATGGCTGATAATAAATGAAATTGAAGAAAACCTCAAATCTGTATTAAA------------AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------AAATACTC---TTT----C-AGTTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126090 : AA---------------TAAAGCAATT---TGAT------T------AAAA---TATTT----------------------ATTT---TTA----C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-
gi|126091 : aaacattgaaatttctgAGCATTTGGCCAAAAGT-----TGA--TC--TGAAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : T------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-
gi|126093 : taaatggaaatttgataagaatattcatttttacccataacattttgaaaaAAAAGTTGATCT--T-AAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGTGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TACAAA-C-AATTTT--TGTCTC------A--------CATT
gi|126094 : AAAGCTGA--TC--TGAAAATACTCTTTCAG-TTT---T----C-----ATTT-----T------AAGCATTA-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126095 : TACTC---TTTTGCCC-ATTTTT--GAAAAT------AA------GCAATGCATACCAATTTAA--GGGGTAAAATACTCATTTGA-AT--AAAAACTTATCTGAA-
gi|126096 : aatgttcagatAATTT--TGATAAGATT-TTTCAT-TTTTACC----CTGAAAATTT-----TGAAAATAAGCACTG-CATAC-----TAAT-T--TAAGGGGTAAAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----
gi|126096 : T------AA------GCACTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCT
gi|126097 : aattttgataagatttttcatttttaccctgaaaattttgaaaaTATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-
gi|126098 : TT----CGAATGTT--CATTTTGAAAATAA------GCATTGCGCACTAATTTAA--GAAGTAAAATACCCATTTGT-AG--AAAAGTTTATCTGGATGCACTa
gi|126099 : AA-TTT---C----T-----GAAT-----T------AGGCATTG-AAATT-----TAAA-T--TAAGAAGTAAAA---------------TAA-GCA-TT---ttattca
gi|126099 : ATTTT------AA------GCATTGCATATTAATTTAA--GCGTTAAAATACTCATTTAAGAG--AAAAGCTTATCTGGA-GCACggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaattttaagcattgcatattaatttaagcgttaaaatactcatttaagagaaaagcttatctggagcac
gi|126100 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaAA-TTT---C----T-----GAAT-----A------AAGCATTG-AAATT-----TAAA-T--TAAGG-GTAAAA---------------TAA-GCA-TT---
gi|126100 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------Aggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaataagcattgtatgctaattgaaggggtaaaataaccatatgagcaaaagcttatctggagcactg
gi|126100 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgtttT------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-GCACTGgcactg
gi|126101 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaaA-TTT---C----T-----AAAT-----A------AAGCATTGACATTG-----AAAT-T--AAGGGGGTAAAA---------------TAA-ACA-TT----GGTTATTCTC------AATAGTTTGTTTTAAATGGCAATTTGATAAGAATGCTCAT-TTT----T-ACCTTCAACATTTTGAATATAA------GCATTGCATGCTTATTAAA--GGGGTAAAGTACTCATTTGA-----AAAAGCTGATCTTGA-GCACTG
gi|126102 : TT-----A------AAGCATTGTCATTCCTGAATAAT-TCCT---GAGTAAAA---------------TAA-GCA-TT-----------------------GGTTAGTTT-----G------------AATTACCG---T--------AAT------ATTTTGAAAATAA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126103 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-
gi|126104 : T------AA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126105 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-ctttcatatt
gi|126106 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-
gi|126107 : ------AAGCATTG-AAATT-----TAAA-T--TAAAGGATAAAA---------------TAA-GCA-TT---TGG
gi|126107 : T------AA------GCATTGCATGCTAATTGTA--GGGGTAAAGTACTCATATAA-AG--AAAAGCTTATCTCGA-GCACTGttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaataagcattgcatgctaattgtaggggtaaagtactcatataaagaaaagcttatctcgagcactg
gi|126108 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaa------AAGCATTG-AAATT-----TAAA-T--TATGGGGTAAAATAAGCATTCTCAATTTAA-GTG-TTGATTAGT------TTGTTTTAAATGGCAATAT-----AA-----------GAATGTTCAT-TTT----T-AACCTTAACATTTTGAATATAA------GTAATGCATACTAATTTAA--GGGGTAATATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126109 : ------AAGCATTG-AAATT-----TAAA-T--TAAGGGGTAAAA---------------TAA-ACA-TT---
gi|126109 : AATTTGATAAGAATGTTCGTT----TTTA--C----C-----TTTTGAAAAT------AAGCATTG-CATGC-----TAAT-T--TAGGG-GTATAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----AG-----------Aggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaataagcattgcatgctaatttaggggtataatactcatttgaagaaaagcttatctagagcaatg
gi|126109 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgatT------AA------GCATTGCATGCTAATTTA---GGGGTATAATACTCATTTGA-AG--AAAAGCTTATCTAGA-GCAATGgcaatg
gi|126110 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaaTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126111 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------Agcactg
gi|126112 : aAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----
gi|126113 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------A
gi|126114 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------A
gi|126115 : AGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126116 : AAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------Agcactg
gi|126117 : aAAAGC-AATTT-----GATTA--------AAATATTTATTTTTA---C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-GCACTG
gi|126118 : AAAATACCCT--CAAGTTT---T----A-----ACTT-----T------TAGCATTG--ATTT-----TAAAAT--CAGGGAGTAAAA---------------TAC-TCA-TT---TAGT------C------A----CTTATTT-----G
gi|126119 : TATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-ACATTG
gi|126120 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-GCACTG
gi|126121 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126122 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126123 : ------AA------GCATCGCATACTTATTTAACGGGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126124 : TAATTTAA--GGGGTAAAATTCGCATTTGA-AG--AAAAACTTATCTGGA-GCACTG
gi|126125 : AATTTAA--GGAGTAAAATACTCGTTCAA-AG--AAAAGCTTATCTGGA-GCATTG
blockSeqs : T A TCTT TGAT G C C AC A T C T A A A A GA G ACC ATAA TGAAA GAAAA GAAAAT A CTGAA A CC TAAGCATTCTCAATT A A GAT TATTCT TGTTTT G TAAAT GCAATTTGATAA TATT TGCC G CAA GAAAAT AAATAA CG G CC T
blockSeqs : T . . TAAT G . . . A T C . A . . . GA . TAC ATAA . . GAAAAT T . . . . . . . . . G . ATTA CAT AAA . TAA GAAAAT AAATAA . . . .
blockSeqs : T . . TAAT A . . . A T C . . . . . GA . ACC . . . GAAAAT . . . . . . . . . . G . A CAT A . T GAATAT . . . . .
blockSeqs : A . . . A . . . . T A . . . . . . . A . . . . . . . . . . . . . . T . A C . . T GAAAAT . . . . .
blockSeqs : A . . . A . . . . T A . . . . . . . . . . . . . . . . . . . . . . T . A C . . T GAATAT . . . . .
blockSeqs : A . . . A . . . . . C . . . . . . . . . . . . . . . . . . . . . . T . G C . . C GAAAAT . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . G G . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G G . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . A C . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G T . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G G . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G C . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G G . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . G G . . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . A G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . A . G . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . A . G . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . G . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . G . G . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . G . A . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . G . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . T . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . G . . . . . . .
blockSeqs : . . . . . . . . . . . . A . . . . . . .
blockSeqs : . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . .
blockSeqCons : A* **
originalCons : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGG-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
finalCons : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGA-AAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
Alignments
lowQualScore : 1111 44444 1 1 111111 111111111111 1111 1111 222222
lowQualScore : 1 5 0000 88888 55 5 5 0 66 5 3 2 0 5 0 5 5 0 5 77 1 999 6666 33333 33333 111111 2 33333 1 11 0 888888888888888 1 1 222 444444 444444 1 33333 000000000000 2222 1111 2 777 333333 777777 11 1 33 1
lowQualScore : . . .... ..... .. . . . .. . . . . . . . . . . .. . ... .... ..... ..... ...... . ..... . .. . ............... . . ... ...... ...... . ..... ............ .... .... . ... ...... ...... .. . .. .
lowQualScore : 0 7 6666 66666 22 0 0 2 99 5 2 5 8 0 0 0 0 8 0 55 5 666 5555 88888 77777 555555 7 33333 3 88 4 111111111111111 3 3 333 333333 333333 0 66666 444444444444 6666 5555 4 888 888888 999999 88 3 77 4
consensus : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-GAAAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
Reference ( family-507 ) : CATGTTGAGTATTTCCAAGTGTTTNAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATTT-A-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-GAAAAAA-A-ACAACAGA--AAACCCAATCATTATCTGCTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTNATCT-----GG-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126082 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCAGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGACGGAAAAAA-A-ACAACAG---AAACCCAATCATTATCTGCTAACTTAATCCAGTTCTTTACGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAATATTAACAGTGTCTGGTCAGAAGAAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126083 : CATGTTGAGTATT-CCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-GGAAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATTCTCTCAAAAGTGAGTTATTGATTCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----TA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGTGTAAAATAAGCATTT---AGCCAAAAGCTTATCTGGA-GCACTG
gi|126084 : CATGTTGAGTATTTCCAAGTGTTTTAAA-GAGGCCTGCTATA----AACGAACCTGCATTATTTTAGCCGATTACTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-GGAAAAA-A-ACAACAGA--AA-CCCAATCATTATCTGCTAACTTAATCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATATATTACGAAGTCACAAAA-AA-TGAACAAAAAACACACGGGTGGCAA-GGTCAATAGAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGGCAA------ATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTGAATTTTAATTTAG--GGAGTAAAATAAGCATTTAT-CC--AAAAGCTTATCTGGA-GCACTG
gi|126085 : CATGTTGAGTATTTCCAAGTATTTTAAA-GAGGCCTGCTTTA----AACGAAACTGCATTACTTTAGCCGATTAGTTTATCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC--AAAAAA-A-ACAACAAAACAAACCCAATCATTATT--CTAACTTATTCCAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGCGAGTTATTGATGCATGTATTACAAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-TGTCAATACAAATACCATTGAATCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGGAATTGAAGACAACCTCAAATCTGTATGAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------AAATACTC---TTT----C-AATTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126086 : CATGTTGAGTATTTCCAAGTGTTTAAAAAGAGGCCTGCTATA----AATGAACCTGCATTACTTTAGCCGATTACTTTATCGTTTTTATTTGA-TATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-AAAACAA-A-ACAACCGA--AA-CCCAATCATAATCTGATAACTTATTCAACTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAATTCACAAAA-AA-TAAACAAAAAATACATGGGAGGCAAAGGTCAATACAAATACCATTGATTCATGGAAAGTAAAATTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATAAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------AAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126087 : CATGTTGAGTATTTCCAAGTGTTTAAAA-GAGGCCTGCTATA----AACGAACCTGCATTACTTTAGCCGATTACTTTATCATATTTATTT-AATATAAATGGCATCGTCTGCTTCTAGCGTCGGAAGAC-GAAAAAACA-ACAACA-A--AAACCCAATCATTATCTGATAACTTATTTCAGTTCTTTAAGAA-AAAACAATACTCTCAAAAGTGAGTTATTGATGCATGTATTATGATGTCACAAAA-AAATAAACAAAAAACAC--GGGAGGCAA-GGTCAATACAAATAACATTGAATCGTGGAAAGTAAAGTTCCCATGGCTGATAATAAATGAAATTGAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TTT----C-
gi|126088 : CATGTTGAGTATTTCCAAATGTTGAAAA-GAGGCCTGCTTTA----AATGAACTTGAATTACTTTAGCCAATTACTTTATCGTATTTATTT-AATATAAATGACATTGTCTGCTTCTGACGTCGGAAGAC-GAAAAAA-ACACAACAGA--AA-CCCAATCATTATCTG---ACTTATTCCAGTTCTTTAAGAATAAA-CGATACTCTCAAAAGTGAGTTATTGATGTATGTATTACGAAGTCACAAAAAAA-TAAACAAAAAACACACAGGAGGCAA-GGTCAATACAAATACCACTGAATCATGGAAAGTAAAGTTCCCATGGCTGAAAATAAATGAAATTAAAGGCAACCTCAAATCTGTATTAAAGCAAACATTAACAGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TCT----C-ACCTTC--CA
gi|126089 : CTATATCTTAATGAACCTGCATTACTTTA-------------TCGTATTTATT-----ATAAATGGCATCGTCTGCTTCTGGCGTCGGAAGAC-AAAAAAA-A-AAAAAAAG--AAACCCAATCATTATT--CTAATTTATTCAAGTTCTTTAAGAA-AAA-CAATACTCTCAAAAGTGAGTTATTGATGCATGTATTACGAAGTCACAAAA-AA-TAAACAAAAAACACACGGGAGGCAA-GGTTAATACAAATACCATTGAATCATGGAAAATAAAATTCCCATGGCTGATAATAAATGAAATTGAAGAAAACCTCAAATCTGTATTAAA------------AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------AAATACTC---TTT----C-AGTTTT--CATTTT------AA------GCATTAAATTTTAATTTAG--GGAGTAAAATAAGCATTTGG-CC--AAAAGCTTATCTGGA-GCACTG
gi|126090 : AA---------------TAAAGCAATT---TGAT------T------AAAA---TATTT----------------------ATTT---TTA----C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-
gi|126091 : aaacattgaaatttctgAGCATTTGGCCAAAAGT-----TGA--TC--TGAAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------A
gi|126092 : T------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-
gi|126093 : taaatggaaatttgataagaatattcatttttacccataacattttgaaaaAAAAGTTGATCT--T-AAAATACTCTTTCAA-TTT---T----C-----ATTT-----T------AAGCATTG-AATTT-----TAAT-T--TAGGGTGTAAAA---------------TAA-GCA-TT---TAGC------C------AAAAGCTTATCT-----GG------------AGCACTG---TACAAA-C-AATTTT--TGTCTC------A--------CATT
gi|126094 : AAAGCTGA--TC--TGAAAATACTCTTTCAG-TTT---T----C-----ATTT-----T------AAGCATTA-AATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126095 : TACTC---TTTTGCCC-ATTTTT--GAAAAT------AA------GCAATGCATACCAATTTAA--GGGGTAAAATACTCATTTGA-AT--AAAAACTTATCTGAA-
gi|126096 : aatgttcagatAATTT--TGATAAGATT-TTTCAT-TTTTACC----CTGAAAATTT-----TGAAAATAAGCACTG-CATAC-----TAAT-T--TAAGGGGTAAAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----
gi|126096 : T------AA------GCACTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCT
gi|126097 : aattttgataagatttttcatttttaccctgaaaattttgaaaaTATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-
gi|126098 : TT----CGAATGTT--CATTTTGAAAATAA------GCATTGCGCACTAATTTAA--GAAGTAAAATACCCATTTGT-AG--AAAAGTTTATCTGGATGCACTa
gi|126099 : AA-TTT---C----T-----GAAT-----T------AGGCATTG-AAATT-----TAAA-T--TAAGAAGTAAAA---------------TAA-GCA-TT---ttattca
gi|126099 : ATTTT------AA------GCATTGCATATTAATTTAA--GCGTTAAAATACTCATTTAAGAG--AAAAGCTTATCTGGA-GCACggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaattttaagcattgcatattaatttaagcgttaaaatactcatttaagagaaaagcttatctggagcac
gi|126100 : aatttctgaattaggcattgaaatttaaattaagaagtaaaataagcattggatattctcaatttcagtgttgattagtttgttttatattgcatgttcatttttaccgttaacattttgaaaAA-TTT---C----T-----GAAT-----A------AAGCATTG-AAATT-----TAAA-T--TAAGG-GTAAAA---------------TAA-GCA-TT---
gi|126100 : TAAATGGAAATTTGATAAGAATATTCATT----TTTACCCATAAC-----ATTT-----TGAAAATAAGCATTG-TATGC-----TAAT-T--GAAGGGGTAAAA---------------TAA-CCA-TA---TGAG------C------AAAAGCTTATCT-----GG-----------Aggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaataagcattgtatgctaattgaaggggtaaaataaccatatgagcaaaagcttatctggagcactg
gi|126100 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgtttT------AA------GCATTGTATGCTAATTGAA--GGGGTAAAATAACCATATGA-GC--AAAAGCTTATCTGGA-GCACTGgcactg
gi|126101 : aatttctgaataaagcattgaaatttaaattaagggtaaaataagcattggttattctcaatttcattgttgattattttgttttaaatggaaatttgataagaatattcatttttacccataacattttgaaaaA-TTT---C----T-----AAAT-----A------AAGCATTGACATTG-----AAAT-T--AAGGGGGTAAAA---------------TAA-ACA-TT----GGTTATTCTC------AATAGTTTGTTTTAAATGGCAATTTGATAAGAATGCTCAT-TTT----T-ACCTTCAACATTTTGAATATAA------GCATTGCATGCTTATTAAA--GGGGTAAAGTACTCATTTGA-----AAAAGCTGATCTTGA-GCACTG
gi|126102 : TT-----A------AAGCATTGTCATTCCTGAATAAT-TCCT---GAGTAAAA---------------TAA-GCA-TT-----------------------GGTTAGTTT-----G------------AATTACCG---T--------AAT------ATTTTGAAAATAA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126103 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-
gi|126104 : T------AA------GCGTTACATACTAATTTAA--GGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCAGGA-GCACTG
gi|126105 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-ctttcatatt
gi|126106 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-
gi|126107 : ------AAGCATTG-AAATT-----TAAA-T--TAAAGGATAAAA---------------TAA-GCA-TT---TGG
gi|126107 : T------AA------GCATTGCATGCTAATTGTA--GGGGTAAAGTACTCATATAA-AG--AAAAGCTTATCTCGA-GCACTGttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaataagcattgcatgctaattgtaggggtaaagtactcatataaagaaaagcttatctcgagcactg
gi|126108 : aagcattgaaatttaaattaaaggataaaataagcatttggttattcagtttcattgttgattagttgtattaaatggcaccttttacccataacatttttgaaaa------AAGCATTG-AAATT-----TAAA-T--TATGGGGTAAAATAAGCATTCTCAATTTAA-GTG-TTGATTAGT------TTGTTTTAAATGGCAATAT-----AA-----------GAATGTTCAT-TTT----T-AACCTTAACATTTTGAATATAA------GTAATGCATACTAATTTAA--GGGGTAATATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126109 : ------AAGCATTG-AAATT-----TAAA-T--TAAGGGGTAAAA---------------TAA-ACA-TT---
gi|126109 : AATTTGATAAGAATGTTCGTT----TTTA--C----C-----TTTTGAAAAT------AAGCATTG-CATGC-----TAAT-T--TAGGG-GTATAA---------------TAC-TCA-TT---TGAA------G------AAAAGCTTATCT-----AG-----------Aggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaataagcattgcatgctaatttaggggtataatactcatttgaagaaaagcttatctagagcaatg
gi|126109 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgatT------AA------GCATTGCATGCTAATTTA---GGGGTATAATACTCATTTGA-AG--AAAAGCTTATCTAGA-GCAATGgcaatg
gi|126110 : aagcattgaaatttaaattaaggggtaaaataaacattggttactctcaatttcagtcttgattagtttgttttaaatgataatttgataagaatgttcgtttttaccttttgaaaaTAAAGCAAACATTAACAGTGCCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTA-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126111 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AATCATTG-CATTT-----TAAT-T--AAGGGTGTAAAA---------------TAA-GCA-TT---TGAC------C------AAAAGCTGATCT-----GA-----------Agcactg
gi|126112 : aAGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAG-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----
gi|126113 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--CAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------A
gi|126114 : AGTGTCTGGTCAGAAGTAAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAACTGATCT-----GA-----------A
gi|126115 : AGTGTCTGGTCAGAAGTAAAGGGAAACTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CATTT-----TAAT-T--TAGGGAGTAAAA---------------GAG-GCA-TT---TGGC------C------AAAAGCTTATCT-----GG-----------A
gi|126116 : AAAGGTAAATTT--TGAAAATACTCTTTCAA-TTT---C----C-----ATTT-----T------AAGCATTG-CGTTT-----TAAT-T--TAGGGAGTAAAA---------------TAA-GCA-TT---TGGC------C------AAAAGTTGATCT-----GA-----------Agcactg
gi|126117 : aAAAGC-AATTT-----GATTA--------AAATATTTATTTTTA---C-AGTTAA--CATTTTGAAAATAA------GCATTGCATACCAGTTTAA--GGAGTAAAATACTCATTTGA-AG--AATAGCTTATCTGGA-GCACTG
gi|126118 : AAAATACCCT--CAAGTTT---T----A-----ACTT-----T------TAGCATTG--ATTT-----TAAAAT--CAGGGAGTAAAA---------------TAC-TCA-TT---TAGT------C------A----CTTATTT-----G
gi|126119 : TATTG---TTT----C-CATTAA--CATTTT------AAAAATAAGTATTGCATACTAATTTAA--AGAGTAAAATACTCATCTGG-AG--AAAAGCTTATCTGGA-ACATTG
gi|126120 : T------AA------GCATTGCATACTAATTTAA--GGGGTAAAATACTCATTTGA-AA--AAAAACTTATCTGGA-GCACTG
gi|126121 : T------AA------GCATTGCATACTAATTTAA--CGGGTAAAACACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126122 : T------AA------GCATTGCATACTTATTTAA--AGAGTAAAATACTTATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126123 : ------AA------GCATCGCATACTTATTTAACGGGGGTAAAATACTCATTTGA-AG--AAAAGCTTATCTGGA-GCACTG
gi|126124 : TAATTTAA--GGGGTAAAATTCGCATTTGA-AG--AAAAACTTATCTGGA-GCACTG
gi|126125 : AATTTAA--GGAGTAAAATACTCGTTCAA-AG--AAAAGCTTATCTGGA-GCATTG