lowQualScore : 1 222222222
lowQualScore : 1 1 44 11 11 1 1 4444 7 777 4 1 2 999999999 1 1 111 33 1
lowQualScore : . . .. .. .. . . .... . ... . . . ......... . . ... .. .
lowQualScore : 5 2 44 55 44 0 0 5555 9 777 9 0 0 555555555 0 0 888 55 9
consensus : TGTTCAAAAT-TCGT--TGTT--T-TT-AAA----CCCGCGTTTANATC--AACCCCGGCGTAATGATTAGATGTAAAGGTAACACAA-A-TTGTA-TT--TT-A-TCTG---C--ATGAAAGTTAT
Reference ( gi|126001 ) : TGTTGAAAAT-TCAT--TGTT--T-TT-AAA----CCCGCGTTTATATT--AACCCCGGCGTAACGATTAGATGTAAAGGTAACACAA-A-TGATA-TA--TT-A-TCTG---C--ATGAAAGTTAT
gi|126006 : TGTTCAAAAT-TCAT--TGTT--T-TT-AAT----CCCGTGTTTATATC--AGCCCCGGCGTAATGATTCGATGAAAAGGTAACACAA-A-TTGTA-TA--TT-A-TCTG---C--ATGGAAGTAAT
gi|126002 : TATTGAAAAT-TTGT--TGTT--T-TT-AAA----CCCGCTTTTATATC--AATCCCGGCATAATGATTAAATGTAAAGTTAACACAA-A-CTGTA-TT--CT-A-TCGG---C--ATAAAAGTTAT
gi|126007 : TATTCAAAAT-TCAT--TGTT--T-TT-AAA----CCCGCGTTTATATC--AATCCAGGCGTAATGATTAGCTTTAAAGGTAACTTAA-A-TTGTG-TT--TT-A-TCTG---C--ATGACGGTTATaa
gi|126005 : TGTTCAAAAT-TCGT--TGTT--T-TT-AAA----CCCGTGTTTATAT---AAACCCGGCGTTATGATTAGATGTAAAGGTAACACAA-A-TTGTA-TT--TT-A-TCTA---C--aa
gi|125998 : TGTTCAAAAT-TTGT--TGTT--T-T--AAG----CCCGCGTTTAAATT--AACCCCATCATAATGATTAGATGTAAAGGTAACACAA-A-TTGTA-TT--TT-ATTCTG---T--ATAAAAGTTAT
gi|126009 : TGTTCAAAAT-TCAT--TGTT--T-TT-TAA----ACCACATTTATTTA--AACCCTGGCATAATGATTAGATGTAAAAGTAATACAA-A-TTGTA-TT--TT-A-TCTG---C--ATGAAAaa
gi|126008 : TGTTCAAACT-TCGT--TGTT--T-TA-AAA----CCCGCATTTATATC--AACTCCGGTATGATGATTACATGTAAAAGTAACACAA-A-T--TG-TA--TT---TCTA---C--ATGAAAGTTAT
gi|125999 : TGTTTTAAAT-GTAT--TGTT--T-TT-AAA----TCCACGTTTTAATC--AACCCCGGCGTAATGATTAGATGTAAAGGTAACATAA-A-TTGCG-TT--TT-A-TCTG---C--ATAAAAATTAaa
gi|126003 : TGTTCAAAAT-TCAT--TGTC--A-AT-AAA----TCCGCGTTTAAATT--AATCCTGCCGTAATGATTAGATGTAAAGGTAACATAA-A-TTGTA-TT--TT-A-TCTG---T--ATAAAAcaa
gi|126004 : TGTTCACAAT-GTGT--TGTT--T-TA-AAA----CCTGCGTTTATACC--AACTCCAGCATAATGATTAGATGTAAAGGTAACACAA-A-TTGTATTT--TT-A-TCTG---C--ATGAGAATTAT
gi|126014 : TGTTCAAAAT-TCGT--TGTT--A-TT-AAA----CTCGCGTTTATATC--AAC------GTAATGACTAGATATAAGGGTAACACAA-A-TTATA-TT--TC-A-TTTG---C--ATGAACGTTATaa
gi|126015 : TGTTCAAAAT-ATAT--TGTT--T-TTTAAA----CACGCGTTTA-ATC--AACCCCGTCGTAATGATTAAATATAAAGGTAACACAATA-TG-TG-TT--TT-A-TTTG---TA-ATGAAAGTaa
gi|126013 : TGTTCAAAAT-TTGT--TATT--T-TT-ACA----CCCGCGTTTTAATC--AACCCCGGCGTAATATTT---TGAGAACGTAACATAA-A-TTACA-TT--TT-A-TCTG---C--ATGGAAGTTAT
gi|126000 : TGTTCAAAAT-TCGT--TGTT--T-TT-AAA----CCCGCATTTATATC--AATCCCGGCGTAATGATTA----TA----TAACACAA-A-TTGCA-AT--TT-A-TCTG---C--ATaa
gi|126017 : TGTTCAAAA----GT--TGTT--T-TT-AAA----CCTGCGTTTTAATT--AACCCCGACATAACGATTAGATGTTAAAGTAACATAG-C-TTATG-TT--TT-A-TCTG---T--TTTAAAGttataa
gi|126012 : TGTTCAAAAT-GTGT--TGTT--T-AA-ATA----CCCACTTTTTAATC--GACCCCGGCGTAGTGATTAGATGTAAAGGTAACATAA-A-TTGTG-TT--TT-T-TCTG---T--ATTAAAGTTGTaactat
gi|126019 : TGTTAAATAT-AAGT--TGGT--T-TT-AAA----CCCGCGTTTATATC--AACCCCGGCGTATTTATTAGATCTAAAGACAATACAA-C-CCCT------CT-A-TCTG---T--AGAAAAGTTATaa
gi|126010 : TATTCAAAATGTTAT---GTT--T-TT-AAA----CCAGCTTTTTAATC--AACCCCGGTGTAATGATTAGGTATAAAGGTAAC-----------A-TT--TT-A-TCTGTATT--ATTAAAGTTAT
gi|126016 : TGTTCAAAAG-TTGT--TGTT--TAGT-AAA----CT-GC-TTTAAACTC-AACTCCGTCGTAATGGTTACATGTAAAGATAACACAA-ATTGAAA-T---TA-A-TCTG---T--ATAAAAGTTATaa
gi|126021 : TGTTAAATAT-T-AT--TTGT--T-TA-AAA----CTCGCGTTTATATC--AACCGCGGCGTATTGATTAGATCTAAAGACAATACAA-C-CCCT------CT-A-TCTG---T--AGAAGAGTTATaa
gi|126022 : TGTTCAATAT-TCGT--TGGT--T-GG-AAA----CCCGCGTTAAAATC--AACCTCATTGTAACGATTAGATATAaa
gi|126020 : TGTTGAAAAA-TTGT--TGTT--T-TT-AAAA---CCCGCGTTTAAATC--AACCTCG
gi|126018 : TATTTAAAAT-TCAT--TGTT--T-TA-AAA----CCAGTATTTAACTC--AACTCTTTCGTATTGATTAGAGTTAAAtaatagtggtaacccaacttgcgttttatatgtataacaaatataa
gi|126023 : GTTCAAAAT-TTAT--TGTT--T-AT-AAA----CCCGCATTTAAAAC--AACCCCGTTGTTATGATTAGACGTGAAAGTAACATAA-T-TTGTA-TT--TT-A-TCTG---T--GTAAAAGTTAT
gi|126024 : GTTCAAAAT-GTGT--TGTT--T-TT-AAA----CCCGCGTTTAAACC--AACCCCGTCGTATTGATTAGACGTGAAAGTATAATAA-T-TTGTA-TT--TT-A-TCTG---T--GTAAAAGTTAT
gi|126025 : GTTAAAAAT-CTGTGTTGTT--T-TC-AAA----CTGGCATTTAAATA--AACTCTGTTGTAATCATTAGATGTAAAGTCAACACAA-T-TG-TG-TT--AT-A-TCTG---TG-ATAAAAATa
gi|126026 : TTTAAAAT-TCGT--TGTT--T-TT-GAA----CCCGCGTGTAAATC--AACCCCGGCGTAATGATTAGACGTAAATGTTACACAT-A-CTGTA-TT--TT-A-CCTG---C--ACGAAAGTTATataa
gi|126028 : TTCAAAAT-CCGT--TGGT--T-TT-AAA----TCCGCGATTATATC--AGCCCCGGCGTGATGATTA-----------AACA----A-TTGTA-TT--TT-A-TCTG---C--ATGAAAGTTATa
gi|126011 : GGAAAT-TTGT--TGTT--T-TT-GAA----CTTACTTTTTAATC--AACCTCAGCTTAATGATTAGATGTAAAGGTAACACAA-A-TTGCA-TT--TT-A-TCTG---T--ATTAAAaa
gi|126029 : tgctcaaAACAT-TTTT--TGTT--T-TT-AAA----CC---ATTT-TAATCAAACCCCGGCATAATGATTAAATGTAAAGGTAACATAA-act
gi|126032 : AAT-TTGT--TGTT--T-TT-AAA----CCCG--TTTACATC--AACTCCGGCGTAATAATTAGATGTAAAGGTAACACAA-A-TTGTC-TT--TT-A-TCTG---C--ATGTAGGTTAT
gi|126033 : AAT-TCCT--TGTT--T-TT-AAA----CCTGCGTTTTAATC--AACCCCGGCGTAATGAGTAGATGTAAAGGTACCATAA-A-TTGCG-TT--TT-A-TCTG---T--TTTAAAGTTATaa
gi|126030 : AAT-T--T--TGTTGTT-TT-AAA----CGCGCGTTTTAATC--AACCCCTGCGTAACGGTTAGATGTAAATGTAACATAA-A-TTGCG-TT--TT-A-TCCG---T--ATTAAAGCTATaa
gi|126031 : -TCGT--TGTT--T-TT-AAA----CCTGCGTTTTTATC--AACCC-GGCGTAATTATTAGATGTAAAGGTAACATAA-A-Taa
gi|126027 : aaattttaaT--TGTT--T-TT-AAA----CCCGCGTTTAAACC--ATCCCCGTCGTAATGATTAGATGTGAAAGTAGCATAA-T-TTGTA-AT--TT-A-TCTG---T--GTAAAAGTTATtg
gi|126034 : ttcaatatatc--TGTT--T-TA-AAAAA--CCCGT-TTTA-ACC--AACCCCTGCGCAATGATAAGATGTAAAGGCAACATAA-A-TTGCA-TT--GT-A-TCTG---T--ATTAAAa
gi|126035 : TT--T-TT-AAA----ACCGCATTTATATC--GATCCCGGCGTAATGAATAGTTATGAAGGAAATACAA-AGTG-TA--A--TTCA-TCTG---C--ATGAAAGTTATaat
gi|126036 : T--T-TA-AAA----CCCGCGTTTTAACC--AACTCCGTCGGAATGATTAGATGTAAAGATAACACAG-T-TTGCG-TT--TT-A-GCTT---T--ATAAACGTTATaa
gi|126037 : -TT-AAAAAACCCCGCGTTTTAATC--AACCCCGGCGTAATGCTTAAATGTAAGGGTAACATAA-A-TTGCG-TT--TT-A-TATG---T--GTTAAAGTTGTaa
gi|126038 : A----CCGGCGTTTATATC--GTCCCCGGCGTAATGATTAGATGTAAAGGCAACACAA-A---ATG-TACTTT-A-TCTG---C--ATGTAAGTTATaa
gi|126039 : TTTA-ATC--AACCCCGTCGTAATGACTAGATGTAAAGGTAACA-GA-A-TG-TG-TG--TT-T-TTTC---CTAATAAAAGTAATaa
gi|126040 : TTTAT-TC--AACCCCGTCGTAATGATTGGATGAACATGTAAAACAA-T-TTGCG-CT--TT-A-TCTG---C--ATAGAAGTTATaa
gi|126043 : tATC--AATCCCAGCATAATGATTAGATGGAAAGGTAACACAA-A-TTGTA-TT--TT-A-TCTA---C--ATGAAAGTTATaa
gi|126042 : ATC--AACCCCGGCGTAATGGTTAGATATAAAGGTAACACAA-T-TTGCG-TT--TT-A-TCTG---T--ATAACAGTTAT
gi|126041 : aACCCCTGCGTAATGATTAGATGTAAAGGTaa
Alignments
lowQualScore : 222 1 11 11 1 1 3333 2 0 0 0 1 1 22222 1
lowQualScore : ... . .. .. . . .... . . . . . . ..... .
lowQualScore : 000 1 55 55 0 0 0000 8 9 9 9 0 0 55555 7
consensus : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
Reference ( family-492 ) : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
gi|125998 : TGTTCAA---AAT-TTGT--T--GTTT-T--AAG----CCCGCGTTTAAA-T-TAA-CCCCATCATAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTATTCTG---T-ATAAAAGTTAT
gi|125999 : TGTTTTA---AAT-GTAT--T--GTTT-TT-AAA----TCCACGTTTTAA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACATAAATTGCG-TTTTA-TCTG---C-ATAAAAATTAaa
gi|126000 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCATTTATA-T-CAA-TCCCGGCGTAATGATTA----TA----TAACACAAATTGCA-ATTTA-TCTG---C-ATcaa
gi|126001 : TGTTGAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-TAA-CCCCGGCGTAACGATTAGATGTAAAGGTAACACAAATGATA-TATTA-TCTG---C-ATGAAAGTTATttataa
gi|126002 : TATTGAA---AAT-TTGT--T--GTTT-TT-AAA----CCCGCTTTTATA-T-CAA-TCCCGGCATAATGATTAAATGTAAAGTTAACACAAACTGTA-TTCTA-TCGG---C-ATAAAAGTTAT
gi|126003 : TGTTCAA---AAT-TCAT--T--GTCA-AT-AAA----TCCGCGTTTAAA-T-TAA-TCCTGCCGTAATGATTAGATGTAAAGGTAACATAAATTGTA-TTTTA-TCTG---T-ATAAAAaa
gi|126004 : TGTTCAC---AAT-GTGT--T--GTTT-TA-AAA----CCTGCGTTTATA-C-CAA-CTCCAGCATAATGATTAGATGTAAAGGTAACACAAATTGTATTTTTA-TCTG---C-ATGAGAATTAT
gi|126005 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGTGTTTATA-T-AAA-CCC-GGCGTTATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-aa
gi|126006 : TGTTCAA---AAT-TCAT--T--GTTT-TT-AAT----CCCGTGTTTATA-T-CAG-CCCCGGCGTAATGATTCGATGAAAAGGTAACACAAATTGTA-TATTA-TCTG---C-ATGGAAGTAAT
gi|126007 : TATTCAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-CAA-TCCAGGCGTAATGATTAGCTTTAAAGGTAACTTAAATTGTG-TTTTA-TCTG---C-ATGACGGTTAT
gi|126008 : TGTTCAA---ACT-TCGT--T--GTTT-TA-AAA----CCCGCATTTATA-T-CAA-CTCCGGTATGATGATTACATGTAAAAGTAACACAAATTGTA-TT----TCTA---C-ATGAAAGTTATaa
gi|126009 : TGTTCAA---AAT-TCAT--T--GTTT-TT-TAA----ACCACATTTATT-T-AAA-CCCTGGCATAATGATTAGATGTAAAAGTAATACAAATTGTA-TTTTA-TCTG---C-ATGAAAaa
gi|126010 : TATTCAA---AAT---GT--TATGTTT-TT-AAA----CCAGCTTTTTAA-T-CAA-CCCCGGTGTAATGATTAGGTATAAAGGTAAC---------A-TTTTA-TCTGTATT-ATTAAAGTTAT
gi|126011 : TGCTCAAGGAAAT-TTGT--T--GTTT-TT-GAA----CTTACTTTTTAA-T-CAA-CCTCAGCTTAATGATTAGATGTAAAGGTAACACAAATTGCA-TTTTA-TCTG---T-ATTAAAaa
gi|126012 : TGTTCAA---AAT-GTGT--T--GTTT-AA-ATA----CCCACTTTTTAA-T-CGA-CCCCGGCGTAGTGATTAGATGTAAAGGTAACATAAATTGTG-TTTTT-TCTG---T-ATTAAAGTTGTact
gi|126013 : TGTTCAA---AAT-TTGT--T--ATTT-TT-ACA----CCCGCGTTTTAA-T-CAA-CCCCGGCGTAATATTT---TGAGAACGTAACATAAATTACA-TTTTA-TCTG---C-ATGGAAGTTATaa
gi|126014 : TGTTCAA---AAT-TCGT--T--GTTA-TT-AAA----CTCGCGTTTATA-T-CAA-C------GTAATGACTAGATATAAGGGTAACACAAATTATA-TTTCA-TTTG---C-ATGAACGTTATaa
gi|126015 : TGTTCAA---AAT-ATAT--T--GTTT-TTTAAA----CACGCGTTTA-A-T-CAA-CCCCGTCGTAATGATTAAATATAAAGGTAACACAATATGTG-TTTTA-TTTG---TAATGAAAGTaa
gi|126016 : TGTTCAA---AAG-TTGT--T--GTTTAGT-AAA----CT-GC-TTTAAACT-CAA-CTCCGTCGTAATGGTTACATGTAAAGATAACACAAATTGAA-ATTAA-TCTG---T-ATAAAAGTTAT
gi|126017 : TGTTCAA---AA----GT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-TAA-CCCCGACATAACGATTAGATGTTAAAGTAACATAGCTTATG-TTTTA-TCTG---T-TTTAAAGaa
gi|126018 : TATTTAA---AAT-TCAT--T--GTTT-TA-AAA----CCAGTATTTAAC-T-CAA-CTCTTTCGTATTGATTAGAGTTAAAaactat
gi|126019 : TGTTAAA---TAT-AAGT--T--GGTT-TT-AAA----CCCGCGTTTATA-T-CAA-CCCCGGCGTATTTATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAAAGTTAT
gi|126020 : TGTTGAA---AAA-TTGT--T--GTTT-TT-AAAA---CCCGCGTTTAAA-T-CAA-CCT---CGTAATAGT----------GGTAACCCAACTTGCG-TTTTA-TATG---T-ATA
gi|126021 : TGTTAAA---TAT-TATT--T--GTTT-A--AAA----CTCGCGTTTATA-T-CAA-CCGCGGCGTATTGATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAGAGTTATcaaatataa
gi|126022 : TGTTCAA---TAT-TCGT--T--GGTT-GG-AAA----CCCGCGTTAAAA-T-CAA-CCTCATTGTAACGATTAGATATAaa
gi|126023 : GTTCAA---AAT-TTAT--T--GTTT-AT-AAA----CCCGCATTTAAA-A-CAA-CCCCGTTGTTATGATTAGACGTGAAAGTAACATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126024 : GTTCAA---AAT-GTGT--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAA-CCCCGTCGTATTGATTAGACGTGAAAGTATAATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126025 : GTTAAA---AAT-CTGTGTT--GTTT-TC-AAA----CTGGCATTTAAA-T-AAA-CTCTGTTGTAATCATTAGATGTAAAGTCAACAC-AATTGTG-TTATA-TCTG---TGATAAAAATa
gi|126026 : TTTAA---AAT-TCGT--T--GTTT-TT-GAA----CCCGCGTGTAAA-T-CAA-CCCCGGCGTAATGATTAGACGTAAATGTTACACATACTGTA-TTTTA-CCTG---C-ACGAAAGTTATataa
gi|126027 : TTCAA---TATATC-T--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAT-CCCCGTCGTAATGATTAGATGTGAAAGTAGCATAATTTGTA-ATTTA-TCTG---T-GTAAAAGTTATa
gi|126028 : TTCAA---AAT-CCGT--T--GGTT-TT-AAA----TCCGCGATTATA-T-CAG-CCCCGGCGTGATGATTA-----------AACA---ATTGTA-TTTTA-TCTG---C-ATGAAAGTTATa
gi|126029 : AA---CAT-TTTT--T--GTTT-TT-AAA----CC---ATTTTAA-T-CAAACCCCGGCATAATGATTAAATGTAAAGGTAACATAAaa
gi|126030 : A---ATT-TTGT--T--GTTT-T--AAA----CGCGCGTTTTAA-T-CAA-CCCCTGCGTAACGGTTAGATGTAAATGTAACATAAATTGCG-TTTTA-TCCG---T-ATTAAAGCTAT
gi|126031 : -TCGT--T--GTTT-TT-AAA----CCTGCGTTTTTA-T-CAA-CCC-GGCGTAATTATTAGATGTAAAGGTAACATAAATTGaa
gi|126032 : aaattttaa---AAT-TTGT--T--GTTT-TT-AAA----CCCG--TTTACA-T-CAA-CTCCGGCGTAATAATTAGATGTAAAGGTAACACAAATTGTC-TTTTA-TCTG---C-ATGTAGGTTAT
gi|126033 : ---AAT-TCCT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-CAA-CCCCGGCGTAATGAGTAGATGTAAAGGTACCATAAATTGCG-TTTTA-TCTG---T-TTTAAAGTTATaa
gi|126034 : --T--GTTT-TA-AAA----AACCCGTTTTAA-C-CAA-CCCCTGCGCAATGATAAGATGTAAAGGCAACATAAATTGCA-TTGTA-TCTG---T-ATTAAAaa
gi|126035 : TTT-TT-AAA----ACCGCATTTATA-T-CGA-TCCCGGCGTAATGAATAGTTATGAAGGAAATACAAAGTGTA-ATTCA-TCTG---C-ATGAAAGTTATaat
gi|126036 : TT-TA-AAA----CCCGCGTTTTAA-C-CAA-CTCCGTCGGAATGATTAGATGTAAAGATAACACAGTTTGCG-TTTTA-GCTT---T-ATAAACGTTATaa
gi|126037 : -TT-AAAAAACCCCGCGTTTTAA-T-CAA-CCCCGGCGTAATGCTTAAATGTAAGGGTAACATAAATTGCG-TTTTA-TATG---T-GTTAAAGTTGTaa
gi|126038 : A----CCGGCGTTTATA-T-CGT-CCCCGGCGTAATGATTAGATGTAAAGGCAACACAAAATGTA-CTTTA-TCTG---C-ATGTAAGTTATaa
gi|126039 : TTTA-A-T-CAA-CCCCGTCGTAATGACTAGATGTAAAGGTAACAGAATGTGTG-TTTTT-TCCT---A-ATAAAAGTAATaa
gi|126040 : TTTAT--T-CAA-CCCCGTCGTAATGATTGGATGAACATGTAAAACAATTTGCG-CTTTA-TCTG---C-ATAGAAGTTATaa
gi|126041 : tTAAA-TGCTA-CCCCTGCGTAATGATTAGATGTAAAGGTTATAT---CTGTA-TTTaa
gi|126042 : A-T-CAA-CCCCGGCGTAATGGTTAGATATAAAGGTAACACAATTTGCG-TTTTA-TCTG---T-ATAACAGTTAT
gi|126043 : aA-T-CAA-TCCCAGCATAATGATTAGATGGAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-ATGAAAGTTATaa
Alignments
lowQualScore : 222 1 11 11 1 1 3333 2 0 0 0 1 1 22222 1
lowQualScore : ... . .. .. . . .... . . . . . . ..... .
lowQualScore : 000 1 55 55 0 0 0000 8 9 9 9 0 0 55555 7
consensus : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
Reference ( family-492 ) : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
gi|125998 : TGTTCAA---AAT-TTGT--T--GTTT-T--AAG----CCCGCGTTTAAA-T-TAA-CCCCATCATAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTATTCTG---T-ATAAAAGTTAT
gi|125999 : TGTTTTA---AAT-GTAT--T--GTTT-TT-AAA----TCCACGTTTTAA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACATAAATTGCG-TTTTA-TCTG---C-ATAAAAATTAaa
gi|126000 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCATTTATA-T-CAA-TCCCGGCGTAATGATTA----TA----TAACACAAATTGCA-ATTTA-TCTG---C-ATcaa
gi|126001 : TGTTGAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-TAA-CCCCGGCGTAACGATTAGATGTAAAGGTAACACAAATGATA-TATTA-TCTG---C-ATGAAAGTTATttataa
gi|126002 : TATTGAA---AAT-TTGT--T--GTTT-TT-AAA----CCCGCTTTTATA-T-CAA-TCCCGGCATAATGATTAAATGTAAAGTTAACACAAACTGTA-TTCTA-TCGG---C-ATAAAAGTTAT
gi|126003 : TGTTCAA---AAT-TCAT--T--GTCA-AT-AAA----TCCGCGTTTAAA-T-TAA-TCCTGCCGTAATGATTAGATGTAAAGGTAACATAAATTGTA-TTTTA-TCTG---T-ATAAAAaa
gi|126004 : TGTTCAC---AAT-GTGT--T--GTTT-TA-AAA----CCTGCGTTTATA-C-CAA-CTCCAGCATAATGATTAGATGTAAAGGTAACACAAATTGTATTTTTA-TCTG---C-ATGAGAATTAT
gi|126005 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGTGTTTATA-T-AAA-CCC-GGCGTTATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-aa
gi|126006 : TGTTCAA---AAT-TCAT--T--GTTT-TT-AAT----CCCGTGTTTATA-T-CAG-CCCCGGCGTAATGATTCGATGAAAAGGTAACACAAATTGTA-TATTA-TCTG---C-ATGGAAGTAAT
gi|126007 : TATTCAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-CAA-TCCAGGCGTAATGATTAGCTTTAAAGGTAACTTAAATTGTG-TTTTA-TCTG---C-ATGACGGTTAT
gi|126008 : TGTTCAA---ACT-TCGT--T--GTTT-TA-AAA----CCCGCATTTATA-T-CAA-CTCCGGTATGATGATTACATGTAAAAGTAACACAAATTGTA-TT----TCTA---C-ATGAAAGTTATaa
gi|126009 : TGTTCAA---AAT-TCAT--T--GTTT-TT-TAA----ACCACATTTATT-T-AAA-CCCTGGCATAATGATTAGATGTAAAAGTAATACAAATTGTA-TTTTA-TCTG---C-ATGAAAaa
gi|126010 : TATTCAA---AAT---GT--TATGTTT-TT-AAA----CCAGCTTTTTAA-T-CAA-CCCCGGTGTAATGATTAGGTATAAAGGTAAC---------A-TTTTA-TCTGTATT-ATTAAAGTTAT
gi|126011 : TGCTCAAGGAAAT-TTGT--T--GTTT-TT-GAA----CTTACTTTTTAA-T-CAA-CCTCAGCTTAATGATTAGATGTAAAGGTAACACAAATTGCA-TTTTA-TCTG---T-ATTAAAaa
gi|126012 : TGTTCAA---AAT-GTGT--T--GTTT-AA-ATA----CCCACTTTTTAA-T-CGA-CCCCGGCGTAGTGATTAGATGTAAAGGTAACATAAATTGTG-TTTTT-TCTG---T-ATTAAAGTTGTact
gi|126013 : TGTTCAA---AAT-TTGT--T--ATTT-TT-ACA----CCCGCGTTTTAA-T-CAA-CCCCGGCGTAATATTT---TGAGAACGTAACATAAATTACA-TTTTA-TCTG---C-ATGGAAGTTATaa
gi|126014 : TGTTCAA---AAT-TCGT--T--GTTA-TT-AAA----CTCGCGTTTATA-T-CAA-C------GTAATGACTAGATATAAGGGTAACACAAATTATA-TTTCA-TTTG---C-ATGAACGTTATaa
gi|126015 : TGTTCAA---AAT-ATAT--T--GTTT-TTTAAA----CACGCGTTTA-A-T-CAA-CCCCGTCGTAATGATTAAATATAAAGGTAACACAATATGTG-TTTTA-TTTG---TAATGAAAGTaa
gi|126016 : TGTTCAA---AAG-TTGT--T--GTTTAGT-AAA----CT-GC-TTTAAACT-CAA-CTCCGTCGTAATGGTTACATGTAAAGATAACACAAATTGAA-ATTAA-TCTG---T-ATAAAAGTTAT
gi|126017 : TGTTCAA---AA----GT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-TAA-CCCCGACATAACGATTAGATGTTAAAGTAACATAGCTTATG-TTTTA-TCTG---T-TTTAAAGaa
gi|126018 : TATTTAA---AAT-TCAT--T--GTTT-TA-AAA----CCAGTATTTAAC-T-CAA-CTCTTTCGTATTGATTAGAGTTAAAaactat
gi|126019 : TGTTAAA---TAT-AAGT--T--GGTT-TT-AAA----CCCGCGTTTATA-T-CAA-CCCCGGCGTATTTATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAAAGTTAT
gi|126020 : TGTTGAA---AAA-TTGT--T--GTTT-TT-AAAA---CCCGCGTTTAAA-T-CAA-CCT---CGTAATAGT----------GGTAACCCAACTTGCG-TTTTA-TATG---T-ATA
gi|126021 : TGTTAAA---TAT-TATT--T--GTTT-A--AAA----CTCGCGTTTATA-T-CAA-CCGCGGCGTATTGATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAGAGTTATcaaatataa
gi|126022 : TGTTCAA---TAT-TCGT--T--GGTT-GG-AAA----CCCGCGTTAAAA-T-CAA-CCTCATTGTAACGATTAGATATAaa
gi|126023 : GTTCAA---AAT-TTAT--T--GTTT-AT-AAA----CCCGCATTTAAA-A-CAA-CCCCGTTGTTATGATTAGACGTGAAAGTAACATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126024 : GTTCAA---AAT-GTGT--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAA-CCCCGTCGTATTGATTAGACGTGAAAGTATAATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126025 : GTTAAA---AAT-CTGTGTT--GTTT-TC-AAA----CTGGCATTTAAA-T-AAA-CTCTGTTGTAATCATTAGATGTAAAGTCAACAC-AATTGTG-TTATA-TCTG---TGATAAAAATa
gi|126026 : TTTAA---AAT-TCGT--T--GTTT-TT-GAA----CCCGCGTGTAAA-T-CAA-CCCCGGCGTAATGATTAGACGTAAATGTTACACATACTGTA-TTTTA-CCTG---C-ACGAAAGTTATataa
gi|126027 : TTCAA---TATATC-T--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAT-CCCCGTCGTAATGATTAGATGTGAAAGTAGCATAATTTGTA-ATTTA-TCTG---T-GTAAAAGTTATa
gi|126028 : TTCAA---AAT-CCGT--T--GGTT-TT-AAA----TCCGCGATTATA-T-CAG-CCCCGGCGTGATGATTA-----------AACA---ATTGTA-TTTTA-TCTG---C-ATGAAAGTTATa
gi|126029 : AA---CAT-TTTT--T--GTTT-TT-AAA----CC---ATTTTAA-T-CAAACCCCGGCATAATGATTAAATGTAAAGGTAACATAAaa
gi|126030 : A---ATT-TTGT--T--GTTT-T--AAA----CGCGCGTTTTAA-T-CAA-CCCCTGCGTAACGGTTAGATGTAAATGTAACATAAATTGCG-TTTTA-TCCG---T-ATTAAAGCTAT
gi|126031 : -TCGT--T--GTTT-TT-AAA----CCTGCGTTTTTA-T-CAA-CCC-GGCGTAATTATTAGATGTAAAGGTAACATAAATTGaa
gi|126032 : aaattttaa---AAT-TTGT--T--GTTT-TT-AAA----CCCG--TTTACA-T-CAA-CTCCGGCGTAATAATTAGATGTAAAGGTAACACAAATTGTC-TTTTA-TCTG---C-ATGTAGGTTAT
gi|126033 : ---AAT-TCCT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-CAA-CCCCGGCGTAATGAGTAGATGTAAAGGTACCATAAATTGCG-TTTTA-TCTG---T-TTTAAAGTTATaa
gi|126034 : --T--GTTT-TA-AAA----AACCCGTTTTAA-C-CAA-CCCCTGCGCAATGATAAGATGTAAAGGCAACATAAATTGCA-TTGTA-TCTG---T-ATTAAAaa
gi|126035 : TTT-TT-AAA----ACCGCATTTATA-T-CGA-TCCCGGCGTAATGAATAGTTATGAAGGAAATACAAAGTGTA-ATTCA-TCTG---C-ATGAAAGTTATaat
gi|126036 : TT-TA-AAA----CCCGCGTTTTAA-C-CAA-CTCCGTCGGAATGATTAGATGTAAAGATAACACAGTTTGCG-TTTTA-GCTT---T-ATAAACGTTATaa
gi|126037 : -TT-AAAAAACCCCGCGTTTTAA-T-CAA-CCCCGGCGTAATGCTTAAATGTAAGGGTAACATAAATTGCG-TTTTA-TATG---T-GTTAAAGTTGTaa
gi|126038 : A----CCGGCGTTTATA-T-CGT-CCCCGGCGTAATGATTAGATGTAAAGGCAACACAAAATGTA-CTTTA-TCTG---C-ATGTAAGTTATaa
gi|126039 : TTTA-A-T-CAA-CCCCGTCGTAATGACTAGATGTAAAGGTAACAGAATGTGTG-TTTTT-TCCT---A-ATAAAAGTAATaa
gi|126040 : TTTAT--T-CAA-CCCCGTCGTAATGATTGGATGAACATGTAAAACAATTTGCG-CTTTA-TCTG---C-ATAGAAGTTATaa
gi|126041 : tTAAA-TGCTA-CCCCTGCGTAATGATTAGATGTAAAGGTTATAT---CTGTA-TTTaa
gi|126042 : A-T-CAA-CCCCGGCGTAATGGTTAGATATAAAGGTAACACAATTTGCG-TTTTA-TCTG---T-ATAACAGTTAT
gi|126043 : aA-T-CAA-TCCCAGCATAATGATTAGATGGAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-ATGAAAGTTATaa
blockSeqs : GGA A GT AT A T AAAC A TATT A
blockSeqs : . . . . . . A T TA G
blockSeqs : . . . . . . . T TG A
blockSeqs : . . . . . . . T C A
blockSeqs : . . . . . . . A C G
blockSeqs : . . . . . . . T C G
blockSeqs : . . . . . . . T C G
blockSeqs : . . . . . . . T T G
blockSeqs : . . . . . . . T C G
blockSeqs : . . . . . . . T C T
blockSeqs : . . . . . . . T C T
blockSeqs : . . . . . . . A C T
blockSeqs : . . . . . . . A C G
blockSeqs : . . . . . . . A C G
blockSeqs : . . . . . . . A T G
blockSeqs : . . . . . . . T T A
blockSeqs : . . . . . . . A C T
blockSeqs : . . . . . . . A C A
blockSeqs : . . . . . . . A T A
blockSeqs : . . . . . . . T T A
blockSeqs : . . . . . . . A T A
blockSeqs : . . . . . . . T T A
blockSeqs : . . . . . . . A T A
blockSeqs : . . . . . . . A T G
blockSeqs : . . . . . . . A T A
blockSeqs : . . . . . . . A C G
blockSeqs : . . . . . . . A T T
blockSeqs : . . . . . . . A C G
blockSeqs : . . . . . . . T T T
blockSeqs : . . . . . . . A C T
blockSeqs : . . . . . . . A T G
blockSeqs : . . . . . . . T T A
blockSeqs : . . . . . . . C C T
blockSeqs : . . . . . . . A T G
blockSeqs : . . . . . . A T A
blockSeqs : . . . . . T C A
blockSeqs : . . . A A A
blockSeqs : . . . A C G
blockSeqs : . . . T T
blockSeqs : . T C
blockSeqs : A
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
finalCons : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
Alignments
lowQualScore : 222 1 11 11 1 1 3333 2 0 0 0 1 1 22222 1
lowQualScore : ... . .. .. . . .... . . . . . . ..... .
lowQualScore : 000 1 55 55 0 0 0000 8 9 9 9 0 0 55555 7
consensus : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
Reference ( family-492 ) : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCGTTTANA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTG---C-ATGAAAGTTAT
gi|125998 : TGTTCAA---AAT-TTGT--T--GTTT-T--AAG----CCCGCGTTTAAA-T-TAA-CCCCATCATAATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTATTCTG---T-ATAAAAGTTAT
gi|125999 : TGTTTTA---AAT-GTAT--T--GTTT-TT-AAA----TCCACGTTTTAA-T-CAA-CCCCGGCGTAATGATTAGATGTAAAGGTAACATAAATTGCG-TTTTA-TCTG---C-ATAAAAATTAaa
gi|126000 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGCATTTATA-T-CAA-TCCCGGCGTAATGATTA----TA----TAACACAAATTGCA-ATTTA-TCTG---C-ATcaa
gi|126001 : TGTTGAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-TAA-CCCCGGCGTAACGATTAGATGTAAAGGTAACACAAATGATA-TATTA-TCTG---C-ATGAAAGTTATttataa
gi|126002 : TATTGAA---AAT-TTGT--T--GTTT-TT-AAA----CCCGCTTTTATA-T-CAA-TCCCGGCATAATGATTAAATGTAAAGTTAACACAAACTGTA-TTCTA-TCGG---C-ATAAAAGTTAT
gi|126003 : TGTTCAA---AAT-TCAT--T--GTCA-AT-AAA----TCCGCGTTTAAA-T-TAA-TCCTGCCGTAATGATTAGATGTAAAGGTAACATAAATTGTA-TTTTA-TCTG---T-ATAAAAaa
gi|126004 : TGTTCAC---AAT-GTGT--T--GTTT-TA-AAA----CCTGCGTTTATA-C-CAA-CTCCAGCATAATGATTAGATGTAAAGGTAACACAAATTGTATTTTTA-TCTG---C-ATGAGAATTAT
gi|126005 : TGTTCAA---AAT-TCGT--T--GTTT-TT-AAA----CCCGTGTTTATA-T-AAA-CCC-GGCGTTATGATTAGATGTAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-aa
gi|126006 : TGTTCAA---AAT-TCAT--T--GTTT-TT-AAT----CCCGTGTTTATA-T-CAG-CCCCGGCGTAATGATTCGATGAAAAGGTAACACAAATTGTA-TATTA-TCTG---C-ATGGAAGTAAT
gi|126007 : TATTCAA---AAT-TCAT--T--GTTT-TT-AAA----CCCGCGTTTATA-T-CAA-TCCAGGCGTAATGATTAGCTTTAAAGGTAACTTAAATTGTG-TTTTA-TCTG---C-ATGACGGTTAT
gi|126008 : TGTTCAA---ACT-TCGT--T--GTTT-TA-AAA----CCCGCATTTATA-T-CAA-CTCCGGTATGATGATTACATGTAAAAGTAACACAAATTGTA-TT----TCTA---C-ATGAAAGTTATaa
gi|126009 : TGTTCAA---AAT-TCAT--T--GTTT-TT-TAA----ACCACATTTATT-T-AAA-CCCTGGCATAATGATTAGATGTAAAAGTAATACAAATTGTA-TTTTA-TCTG---C-ATGAAAaa
gi|126010 : TATTCAA---AAT---GT--TATGTTT-TT-AAA----CCAGCTTTTTAA-T-CAA-CCCCGGTGTAATGATTAGGTATAAAGGTAAC---------A-TTTTA-TCTGTATT-ATTAAAGTTAT
gi|126011 : TGCTCAAGGAAAT-TTGT--T--GTTT-TT-GAA----CTTACTTTTTAA-T-CAA-CCTCAGCTTAATGATTAGATGTAAAGGTAACACAAATTGCA-TTTTA-TCTG---T-ATTAAAaa
gi|126012 : TGTTCAA---AAT-GTGT--T--GTTT-AA-ATA----CCCACTTTTTAA-T-CGA-CCCCGGCGTAGTGATTAGATGTAAAGGTAACATAAATTGTG-TTTTT-TCTG---T-ATTAAAGTTGTact
gi|126013 : TGTTCAA---AAT-TTGT--T--ATTT-TT-ACA----CCCGCGTTTTAA-T-CAA-CCCCGGCGTAATATTT---TGAGAACGTAACATAAATTACA-TTTTA-TCTG---C-ATGGAAGTTATaa
gi|126014 : TGTTCAA---AAT-TCGT--T--GTTA-TT-AAA----CTCGCGTTTATA-T-CAA-C------GTAATGACTAGATATAAGGGTAACACAAATTATA-TTTCA-TTTG---C-ATGAACGTTATaa
gi|126015 : TGTTCAA---AAT-ATAT--T--GTTT-TTTAAA----CACGCGTTTA-A-T-CAA-CCCCGTCGTAATGATTAAATATAAAGGTAACACAATATGTG-TTTTA-TTTG---TAATGAAAGTaa
gi|126016 : TGTTCAA---AAG-TTGT--T--GTTTAGT-AAA----CT-GC-TTTAAACT-CAA-CTCCGTCGTAATGGTTACATGTAAAGATAACACAAATTGAA-ATTAA-TCTG---T-ATAAAAGTTAT
gi|126017 : TGTTCAA---AA----GT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-TAA-CCCCGACATAACGATTAGATGTTAAAGTAACATAGCTTATG-TTTTA-TCTG---T-TTTAAAGaa
gi|126018 : TATTTAA---AAT-TCAT--T--GTTT-TA-AAA----CCAGTATTTAAC-T-CAA-CTCTTTCGTATTGATTAGAGTTAAAaactat
gi|126019 : TGTTAAA---TAT-AAGT--T--GGTT-TT-AAA----CCCGCGTTTATA-T-CAA-CCCCGGCGTATTTATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAAAGTTAT
gi|126020 : TGTTGAA---AAA-TTGT--T--GTTT-TT-AAAA---CCCGCGTTTAAA-T-CAA-CCT---CGTAATAGT----------GGTAACCCAACTTGCG-TTTTA-TATG---T-ATA
gi|126021 : TGTTAAA---TAT-TATT--T--GTTT-A--AAA----CTCGCGTTTATA-T-CAA-CCGCGGCGTATTGATTAGATCTAAAGACAATACAACCC----CTCTA-TCTG---T-AGAAGAGTTATcaaatataa
gi|126022 : TGTTCAA---TAT-TCGT--T--GGTT-GG-AAA----CCCGCGTTAAAA-T-CAA-CCTCATTGTAACGATTAGATATAaa
gi|126023 : GTTCAA---AAT-TTAT--T--GTTT-AT-AAA----CCCGCATTTAAA-A-CAA-CCCCGTTGTTATGATTAGACGTGAAAGTAACATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126024 : GTTCAA---AAT-GTGT--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAA-CCCCGTCGTATTGATTAGACGTGAAAGTATAATAATTTGTA-TTTTA-TCTG---T-GTAAAAGTTAT
gi|126025 : GTTAAA---AAT-CTGTGTT--GTTT-TC-AAA----CTGGCATTTAAA-T-AAA-CTCTGTTGTAATCATTAGATGTAAAGTCAACAC-AATTGTG-TTATA-TCTG---TGATAAAAATa
gi|126026 : TTTAA---AAT-TCGT--T--GTTT-TT-GAA----CCCGCGTGTAAA-T-CAA-CCCCGGCGTAATGATTAGACGTAAATGTTACACATACTGTA-TTTTA-CCTG---C-ACGAAAGTTATataa
gi|126027 : TTCAA---TATATC-T--T--GTTT-TT-AAA----CCCGCGTTTAAA-C-CAT-CCCCGTCGTAATGATTAGATGTGAAAGTAGCATAATTTGTA-ATTTA-TCTG---T-GTAAAAGTTATa
gi|126028 : TTCAA---AAT-CCGT--T--GGTT-TT-AAA----TCCGCGATTATA-T-CAG-CCCCGGCGTGATGATTA-----------AACA---ATTGTA-TTTTA-TCTG---C-ATGAAAGTTATa
gi|126029 : AA---CAT-TTTT--T--GTTT-TT-AAA----CC---ATTTTAA-T-CAAACCCCGGCATAATGATTAAATGTAAAGGTAACATAAaa
gi|126030 : A---ATT-TTGT--T--GTTT-T--AAA----CGCGCGTTTTAA-T-CAA-CCCCTGCGTAACGGTTAGATGTAAATGTAACATAAATTGCG-TTTTA-TCCG---T-ATTAAAGCTAT
gi|126031 : -TCGT--T--GTTT-TT-AAA----CCTGCGTTTTTA-T-CAA-CCC-GGCGTAATTATTAGATGTAAAGGTAACATAAATTGaa
gi|126032 : aaattttaa---AAT-TTGT--T--GTTT-TT-AAA----CCCG--TTTACA-T-CAA-CTCCGGCGTAATAATTAGATGTAAAGGTAACACAAATTGTC-TTTTA-TCTG---C-ATGTAGGTTAT
gi|126033 : ---AAT-TCCT--T--GTTT-TT-AAA----CCTGCGTTTTAA-T-CAA-CCCCGGCGTAATGAGTAGATGTAAAGGTACCATAAATTGCG-TTTTA-TCTG---T-TTTAAAGTTATaa
gi|126034 : --T--GTTT-TA-AAA----AACCCGTTTTAA-C-CAA-CCCCTGCGCAATGATAAGATGTAAAGGCAACATAAATTGCA-TTGTA-TCTG---T-ATTAAAaa
gi|126035 : TTT-TT-AAA----ACCGCATTTATA-T-CGA-TCCCGGCGTAATGAATAGTTATGAAGGAAATACAAAGTGTA-ATTCA-TCTG---C-ATGAAAGTTATaat
gi|126036 : TT-TA-AAA----CCCGCGTTTTAA-C-CAA-CTCCGTCGGAATGATTAGATGTAAAGATAACACAGTTTGCG-TTTTA-GCTT---T-ATAAACGTTATaa
gi|126037 : -TT-AAAAAACCCCGCGTTTTAA-T-CAA-CCCCGGCGTAATGCTTAAATGTAAGGGTAACATAAATTGCG-TTTTA-TATG---T-GTTAAAGTTGTaa
gi|126038 : A----CCGGCGTTTATA-T-CGT-CCCCGGCGTAATGATTAGATGTAAAGGCAACACAAAATGTA-CTTTA-TCTG---C-ATGTAAGTTATaa
gi|126039 : TTTA-A-T-CAA-CCCCGTCGTAATGACTAGATGTAAAGGTAACAGAATGTGTG-TTTTT-TCCT---A-ATAAAAGTAATaa
gi|126040 : TTTAT--T-CAA-CCCCGTCGTAATGATTGGATGAACATGTAAAACAATTTGCG-CTTTA-TCTG---C-ATAGAAGTTATaa
gi|126041 : tTAAA-TGCTA-CCCCTGCGTAATGATTAGATGTAAAGGTTATAT---CTGTA-TTTaa
gi|126042 : A-T-CAA-CCCCGGCGTAATGGTTAGATATAAAGGTAACACAATTTGCG-TTTTA-TCTG---T-ATAACAGTTAT
gi|126043 : aA-T-CAA-TCCCAGCATAATGATTAGATGGAAAGGTAACACAAATTGTA-TTTTA-TCTA---C-ATGAAAGTTATaa