lowQualScore                  :                                            11                                          2222          11                                                     1                                           2                          1               11                                     111111111                 44444444444444444444444              1           3333333   111                          11                                 1      11  
lowQualScore                  :                   6    3                   88              2          1                6666   1    2 99                          3      6        0  6       5         3          6                      4                          7               88  4        8   2  9                  777777777   777   66 4    11111111111111111111111     3        0   1 1  11 2222222   111 333   4444               33   666      11               1   0      44  
lowQualScore                  :                   .    .                   ..              .          .                ....   .    . ..                          .      .        .  .       .         .          .                      .                          .               ..  .        .   .  .                  .........   ...   .. .    .......................     .        .   . .  .. .......   ... ...   ....               ..   ...      ..               .   .      ..  
lowQualScore                  :                   0    9                   77              0          4                0000   4    8 88                          7      0        7  0       0         7          7                      7                          0               22  5        8   2  5                  000000000   888   11 4    66666666666666666666666     1        1   1 1  44 3333333   666 333   5555               11   444      44               1   8      11  
consensus                     : AGCTGAATGGTTTCAATTCAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGTTGCTTG-ATTTTTTCTTGACGGGACACCAACTTTNGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCNAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGGTAAATCATAAATGACTGT---CACGCCATG---ACA--A-TTTT----------NTT----------TTGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
Reference ( gi|19370 )        : AGCTGAATGGTTTCAATTAAACTTGCTTCAGTGATAAATTTTAATGGTTATAATGGTAACCCAGTCTGTGCAATTAATAAACAATGTGGACAAGTTGCTCG-TTTTTTTCTTGACGGGACACCAACTTTGGAAAGCCGAATGTTCCGGTGGGATACATGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGATGAAAATCCTATTCAACAACATATTGTGGTTATTTTTATATACTATACACTCACTTGTCAGGTTAAATCATAAATGACTGT---CACACTATG---ACA--A-TTTT----------ATT----------TTGTAATTTGAAGAAAAC-A-TC--TTTT--T-AAAA--A---AACA---TACGCTGCAACAATATTACTA--ATATAT--ACCCAGTTTTAGGTT-GTTGGTATAT-TAA
gi|19371                      : AGCTGAATGGTTTCAATTAAACTCGCTTCAGTGATAAATTTTACCAGTTATAATGGTAACCCAGTCTGTTTAATTAATAAACAATGTTGCTAAGTTGCTCA-ATTTTTTCTTGACGGGACACCAACTTTGAAAAGCTGAATGTTCTAGCAGGATACCTGTAATTCCAAGAGCTGTCT-AATATATAAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAA-ATGCGCTCACTCTTCGGGTTAAATAATAAATGACTGT---AAAGCCATG---ACA--ACCTTT----------ATT----------TTGTAATTTGAAGAAAAC-A-TC----TT--T-GAAA--A---AACG---TATGCTGCAACAATATTACTA--ATATAT--ACCCGG-TTTAAGTT-GTTGGTATAT-TAA
gi|19369                      : AGCTGAACGGTTTCAATTAAACTCGCTTCAGTGATAAATTTAACCGGTTATAATGGTAATATAGTCTATGCAATTAATAAACAATGTTGCTGAGTTGCTTG-ATTTTTTCTTGACGGGACACCAACTTCCGAAAGCTTAATGTTCTGGCGGGATACCTGTAATTTCCGGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATCCAACAACATATTGAGGTTATTTTTATATAATATCTGTTCACTAGTCGGGGTAAATCATAAATGACTGT---CACGCCATG---ACA--A-TTTT----------TTT----------TTGTAA-TTGAAGAAAAC-A-TC--TTTG--GAAAAA--A---AAAA---TACCCTGCAACAATATCACTT--ATATAT--ACCCGGTTTAAGGTT-GTTGGTATAT-TAA
gi|19372                      : AGCTGAATGGTTTCAATTCAACTCGTTTCAGTGATAAATTATACTGGTT-TAATGGTAATCCAGTCTGTGTAATTAATAAACAATGT
gi|19373                      : AGCTGAATGGTTCCAATACAACTCGCTTCAGTAGTGAATTTTACCAGTTATAATGGTAATCCAGTCTGTATAATAAATAATCAATGTTGCTAAGATGCTTG-ATTTctcttagatgcttgatttatcattgtgcatgatactaaaacccgagccggttcccggcagcctgt
gi|19374                      : AGCTGAATTGTTTGAATGCAACTCGCTTCAGTGATGAATTTTACCAGTTATGATGGTAATCCACTCTGTGTTATAAATAAACAATGTCGCTAAGATGCTTG-ATT
gi|19375                      : AGTTGAATGGTTTCAAATCAACTAACTTCAGTG----------------ATAATGGTAATCTAGTCTGTGTAATTAA
gi|19376                      :  GCTGAATGGTTTCAATTAAACTTTCTTCAGTGATAAATTTTACCGGTTAGAATGATAACCCAGTCTATTCAATTAATAAACAATGTCGCTTAGTTGCTTGATTTTCTTCTTGACGGGACATCAACTTTAGAAAGCTGTGTGTTCCGGCGGGATACCTGTAATTCCTAGAGCTGTTTCAATATTTTAGGTATATCACTGG--GAAAATCATATTCAACAACATATTGAGGTTATTTTTATATAATATACACTCACTCGTTGGGGTAAATCATAAATGACGGT---CACGCTATG---ACA--A-TATT----------CTT----------TTGTATTTTGAAGAAAAC-G-TC--TTTG--A-GAAA--A---AATG---TATGCTGCAACAATATCACTA--ATATAT--ACCTGGTTTTAAGTT-ATTGGTATAT-TAA
gi|19377                      :   CTGAATGGTTTCAATTCAACTCG--------ATAAATTTTACTGGTTATAATGGTAA
gi|19378                      :               AATTGAACTTGCTTCAGTGATAAATTTTACCAGTTAGAATGGTAATCTAG
gi|19379                      :                                                                                                                                                                                                                                       TTGTTTTTATATAATATGCACTCACTCGTCAGGATAAATCATAAATGACTGT---CACGCCATG---ACA--T-TTTT----------TTT----------CTGTAATTTGAAGAAAAC-A-TC--TTTGAAA-AAAA--A---AACG---TTTGCTGCAACAATATCACTA--ATTCAT--ACCCAGTTTCAGGGT-CTTAGTATAT-TAActa
gi|19384                      :                                                                                                                                                                                                                                                                              CATACATAACTTT---C-CGTGGTG----CA--A-TATT----------AT---------------AGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19382                      :                                                                                                                                                                                                                                                                              CATAGATGATTAT---GAT--CATGTACATA--A-TTTTCTGCGAAGCAATA----------TTGTAGTTTGAAGA---C-A-TC--TGTG--A-AAAC--A---AACA---TACGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTAAGGTT-GTTTGTATAT-AAA
gi|19381                      :                                                                                                                                                                                                                                                                              CATAAACGATTAT---AATTATAT----ACATTA-TTTT----------TTTCCGCGCAATATTGTAGTTTGAAGACAAC-A-TC--TGT-----AAAACCA---AACA---TACACTGCAACAATAGCACTG--ATTTAT--ACCCAGTTTTAGGTT-GTTTGTATGT-AAA
gi|19385                      :                                                                                                                                                                                                                                                                              CATAGATGATTATGATCACA-TACA---A-A--A-TTTTTCGCGAAGCAATA----------CTATAGTTTGCAGACATC-A-AC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATAGCACTG--ATATAT--AACCAGTTTTAGGTT-GTTAATGTATATAA
gi|19380                      :                                                                                                                                                                                                                                                                                                  CCATG---ACA--A-TATT------------T----------TTGCGATTTGAAGAAAAC-A-TC--TTT-------GA--A---AACAGTGTACACTGCAACAATAGTGCTG--ATATATATACCCGGTATTAGGTT-ATTGGTATATATAA
gi|19383                      :                                                                                                                                                                                                                                                                               tcgggctatcataaattctaagttcatggacctttggg----------ATA----------TTATAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACA---TATGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-
gi|19387                      :                                                                                                                                                                                                                                                                                                         catacataattttccgcgaaacaTT----------TTGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATATCACTG--ATACAT--ACCCAGTTTTAGATT-GTTTGTATAT-AAA
gi|19386                      :                                                                                                                                                                                                                                                                                                                                TT----------TTATAATTTGAAGACAAC-A-TC--TTTG--A-AAAC--A---AAAG---TATGCTGTAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19388                      :                                                                                                                                                                                                                                                                                                                                 T----------TGGTAATT-----AAGGCTA-TC--TGTG--A-AAAC--A---AATG---TACGCTGCAACAATAGCGCTG--ATATAT--ACCCAGTTTTAAGTT-GTTTGTATAT-AAA
gi|19397                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAAGACAAC-A-TC--TTTT--A-AAAG--T---AACG---TGCGCTGCAACAATAGAACTG--ATATAT--ACCCAGTTTTAGGTT-GTGTGTATAT-AAA
gi|19389                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGACGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19390                      :                                                                                                                                                                                                                                                                                                                                  ----------TTATAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19395                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAGGAAAAT-A-TC--TTT-----AAAA--AGCAAACG---TACGCTGCAACAATAGCGCTG--ATATAT--ACCCAGTTTTAGTTT-GTTAGTGT
gi|19391                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTGGTTTGAAGGCAAC-A-TC--TGTG--A-AAAC--A---AACA---TACGCTGCAACAGTAGCACTG--ATATAT--ACTCAGTTTTAGGTT-GTTTGTATAT-
gi|19393                      :                                                                                                                                                                                                                                                                                                                                  ----------TTATAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACA---TATGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTTAGTT-GTTTGTATAT-AAA
gi|19394                      :                                                                                                                                                                                                                                                                                                                                  ----------TTATAGTTTGAAGATAAC-A-TC--TGTA--A-AAAC--A---AACG---TATGCTGCAACAACAGCACTG--ATATAT--ACCCAGTTTCAGGTT-GTTTGTATAT-AAA
gi|19396                      :                                                                                                                                                                                                                                                                                                                                  ----------TTTTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATAGCACTG--ATATGT--ACCCAGTTTTAAGTT-GTTTGTATAT-AAA
gi|19392                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AATG---TATGCTGCAACAAAAGCACTGATATATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19399                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAAGACAAC-A-TC--AGTG--A-AAAC--A---AACG---TACGCTGCAGCAATACCATGG--ATATAT--ACCTAGTTTTAAGTT-GTTTGTATAT-AAA
gi|19398                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AAAG---TATGCTGCAACAATAGCAATG--ATATTT--ATCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19400                      :                                                                                                                                                                                                                                                                                                                                  ----------TTGTAGTTTGAAGAAAAT-A-TC--TTTG--A-AAAC--A---AACG---TACACTGCAACAATAGCATTG--ATATAT--AC
gi|19401                      :                                                                                                                                                                                                                                                                                                                                  ----------TTATAGTTTGAAGACAAT-A-TC--TGTA--A-AAAC--A---AACG---TATGCTGCAACAATAGCACTG--ATATAT--Atggtt
gi|19402                      :                                                                                                                                                                                                                                                                                                                                             TGTAATTTGAAGACAAC-A-TCATTCTT--T-GAAA--ACA-AACG---TACGCTGCAACAATAGCACTG--ATATAT--ACCCAGTTTTAGGTT-TTCCGTATAT-AAA
gi|19405                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-GAA
gi|19404                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-GAA
gi|19403                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-GAA
gi|19406                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGATAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATATTACTG--ACATAT--ACCCAGTTTTATGTT-GTTTGTATAT-GAA
gi|19407                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATAT--ACCCAGTTTTAAGTT-GTTTGTATAT-GAA
gi|19409                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATTT--ACCCAGTTTTAGGTT-GTTTGTATAT-GAA
gi|19408                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTTAAGACAAC-A-AC--TGTG--A-AAAC--A---AACA---TATGCTGCAACAATAGCACTT--ACATAT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19410                      :                                                                                                                                                                                                                                                                                                                                             TGTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---AACG---TACCCTGCAACAATAGTACTG--ACATTT--ACCCAGTTTTAGGT
gi|19411                      :                                                                                                                                                                                                                                                                                                                                              GTAGTTTGAAGACAAC-A-TC--TGTG--A-AAAC--A---ACCT---TACCCTGCAACAATAGTACTG--ACATAT--ACCTAGTTTTAGGAT-GTTTGTATAT-GAA
gi|19412                      :                                                                                                                                                                                                                                                                                                                                               TAGTTTGAAGACCAG-G-TC--TGTG--A-AAAC--A---AACG---TATGCTGCAACAATAGCTCTG--ATATGT--ACCCAGTTTTAGGTT-GTTTGTATAT-AAA
gi|19413                      :                                                                                                                                                                                                                                                                                                                                               TAATTTGAAGAAAAA-AATA--TCTT--T-GAAAT-A---AATA---TATGCTGCAATGATAGCACAA--GTATAT--ACCTTAATATGGGTTGGTTGTTATAT-AAA
gi|19414                      :                                                                                                                                                                                                                                                                                                                                                                                           ---TACCCTGCAACAATAGTACTG--ACATTT--ACCCAGTTTTAGGTT-GTTTGTATAT-GAA

lowQualScore                  :                                                                                                                                                                                                                                                                                      222222222222                               11111111111111111111                                                                                                          
lowQualScore                  :                   2                                                                    0   0  2           8      8                1                                    1          2                      9                                           0  1               5            000000000000    0  2       777   55 4 1  4 99999999999999999999                 111    2222   1 11    1                           22                        11  1        
lowQualScore                  :                   .                                                                    .   .  .           .      .                .                                    .          .                      .                                           .  .               .            ............    .  .       ...   .. . .  . ....................                 ...    ....   . ..    .                           ..                        ..  .        
lowQualScore                  :                   5                                                                    4   6  1           0      0                0                                    0          5                      8                                           8  4               2            555555555555    7  3       000   55 0 4  9 11111111111111111111                 888    2222   0 44    0                           88                        55  1        
consensus                     : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
Reference ( family-486 )      : AGCTGAATGGTTTCAATTCAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGTTGCTTGATTTT-TTCTTG-ACGGGACACCAACTTTNGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCNAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGGTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19369                      : AGCTGAACGGTTTCAATTAAACTCGCTTCAGTGATAAATTTAACCGGTTATAATGGTAATATAGTCTATGCAATTAATAAACAATGTTGCTGAGTTGCTTGATTTT-TTCTTG-ACGGGACACCAACTTCCGAAAGCTTAATGTTCTGGCGGGATACCTGTAATTTCCGGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATCCAACAACATATTGAGGTTATTTTTATATAATATCTGTTCACTAGTCGGGGTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTTT---------T----------TTGTAA-TTGAAGAAAA---CATC----TTTGG--AAAA-AAAAAATACCCTGCAACAATATCACTT--ATATATACCCGGTTTAAGGTTGTT--GG-TATATTAA
gi|19370                      : AGCTGAATGGTTTCAATTAAACTTGCTTCAGTGATAAATTTTAATGGTTATAATGGTAACCCAGTCTGTGCAATTAATAAACAATGTGGACAAGTTGCTCGTTTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCCGAATGTTCCGGTGGGATACATGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGATGAAAATCCTATTCAACAACATATTGTGGTTATTTTTATATACTATACACTCACTTGTCAGGTTAAATCATAAAT------------GACTGTCACACTATG---ACA--A-TTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-T--TAAA-AAAACATACGCTGCAACAATATTACTA--ATATATACCCAGTTTTAGGTTGTT--GG-TATATTAA
gi|19371                      : AGCTGAATGGTTTCAATTAAACTCGCTTCAGTGATAAATTTTACCAGTTATAATGGTAACCCAGTCTGTTTAATTAATAAACAATGTTGCTAAGTTGCTCAATTTT-TTCTTG-ACGGGACACCAACTTTGAAAAGCTGAATGTTCTAGCAGGATACCTGTAATTCCAAGAGCTGTCT-AATATATAAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAA-ATGCGCTCACTCTTCGGGTTAAATAATAAAT------------GACTGTAAAGCCATG---ACA--ACCTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-G--AAA---AAACGTATGCTGCAACAATATTACTA--ATATATACCCGG-TTTAAGTTGTT--GG-TATATTAA
gi|19372                      : AGCTGAATGGTTTCAATTCAACTCGTTTCAGTGATAAATTATACTGGTT-TAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCTCTTAGATGCTTGATTTA-TCATTGTGCATGATACTAA
gi|19373                      : AGCTGAATGGTTCCAATACAACTCGCTTCAGTAGTGAATTTTACCAGTTATAATGGTAATCCAGTCTGTATAATAAATAATCAATGTTGCTAAGATGCTTGATTTaacccgagccggttcccggcagcctgt
gi|19374                      : AGCTGAATTGTTTGAATGCAACTCGCTTCAGTGATGAATTTTACCAGTTATGATGGTAATCCACTCTGTGTTATAAATAAACAATGTCGCTAAGATGCTTGATT
gi|19375                      : AGTTGAATGGTTTCAAATCAACTAACTTCAGTG----------------ATAATGGTAATCTAGTCTGTGTAATTAA
gi|19376                      :  GCTGAATGGTTTCAATTAAACTTTCTTCAGTGATAAATTTTACCGGTTAGAATGATAACCCAGTCTATTCAATTAATAAACAATGTCGCTTAGTTGCTTGATTTTCTTCTTG-ACGGGACATCAACTTTAGAAAGCTGTGTGTTCCGGCGGGATACCTGTAATTCCTAGAGCTGTTTCAATATTTTAGGTATATCACTGG--GAAAATCATATTCAACAACATATTGAGGTTATTTTTATATAATATACACTCACTCGTTGGGGTAAATCATAAAT------------GACGGTCACGCTATG---ACA--A-TATTCT---------T----------TTGTATTTTGAAGAAAA---CGTC----TTT-G--AGAA-AAAATGTATGCTGCAACAATATCACTA--ATATATACCTGGTTTTAAGTTATT--GG-TATATTAA
gi|19377                      :   CTGAATGGTTTCAATTCAACTCG--------ATAAATTTTACTGGTTATAATGGTAA
gi|19378                      :               AATTGAACTTGCTTCAGTGATAAATTTTACCAGTTAGAATGGTAATCTAG
gi|19379                      :                                                                                                                                                                                                                                        TTGTTTTTATATAATATGCACTCACTCGTCAGGATAAATCATAAAT------------GACTGTCACGCCATG---ACA--T-TTTTTT---------T----------CTGTAATTTGAAGAAAA---CATC----TTT-GAAAAAA-AAAACGTTTGCTGCAACAATATCACTA--ATTCATACCCAGTTTCAGGGTCTT--AG-TATATTAActa
gi|19380                      :                                                                                                                                                                                                                                                                    TCGGGCTA--TCATAAATTCTAAGTTCATGGACCTTTGGGCCATG---ACA--A-TATT-----------T----------TTGCGATTTGAAGAAAA---CATC----TTT-G--AAAA-CAG-TGTACACTGCAACAATAGTGCTGATATATATACCCGGTATTAGGTTATT--GG-TATATA
gi|19381                      :                                                                                                                                                                                                                                                                               CATAAAC------------GATTATAATTATAT----ACATTA-TTTTTT---------TCCGCGCAATATTGTAGTTTGAAGACAA---CATC----TGT-A--AAAC-CAAACATACACTGCAACAATAGCACTG--ATTTATACCCAGTTTTAGGTTGTT--TG-TATGTAAAtaa
gi|19382                      :                                                                                                                                                                                                                                                                               CATAGAT------------GATTATGAT--CATGTACATA--A-TTTTCTGCGAAGCAATA---------TTGTAGTTTGAAGACA------TC----TGT-G--AAAA-CAAACATACGCTGCAACAATAGCACTG--ATATATACCCAGTTTAAGGTTGTT--TG-TATATAAA
gi|19383                      :                                                                                                                                                                                                                                                                               CATACAT------------AATTTTC-CGCGA-A---ACA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATAT
gi|19384                      :                                                                                                                                                                                                                                                                               CATACAT------------AACTTTC-CGTGGTG----CA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19385                      :                                                                                                                                                                                                                                                                                                                                                      TATAGTTTGCAGACAT---CAAC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAACCAGTTTTAGGTTGTTAATG-TATATAA
gi|19386                      :                                                                                                                                                                                                                                                                                   catagatgattatgatcacatacaaaatttttcgcgaagcaatacT---------T----------TTATAATTTGAAGACAA---CATC----TTT-G--AAAA-CAAAAGTATGCTGTAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19387                      :                                                                                                                                                                                                                                                                                                                                T---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATATCACTG--ATACATACCCAGTTTTAGATTGTT--TG-TATATAAA
gi|19388                      :                                                                                                                                                                                                                                                                                                                                 ---------T----------TGGTAATT--AAGGC-----TATC----TGT-G--AAAA-CAAATGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19389                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGACGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19390                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19391                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTGGTTTGAAGGCAA---CATC----TGT-G--AAAA-CAAACATACGCTGCAACAGTAGCACTG--ATATATACTCAGTTTTAGGTTGTT--TG-TATAT
gi|19392                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAATGTATGCTGCAACAAAAGCACTGATATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19393                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTTAGTTGTT--TG-TATATAAA
gi|19394                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGATAA---CATC----TGT-A--AAAA-CAAACGTATGCTGCAACAACAGCACTG--ATATATACCCAGTTTCAGGTTGTT--TG-TATATAAA
gi|19395                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAGGAAAA---TATC----TTT-A--AAAAGCAAACGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAGTTTGTT--AG-TGT
gi|19396                      :                                                                                                                                                                                                                                                                                                                                           ----------TTTTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATGTACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19397                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TTT-T--AAAA-GTAACGTGCGCTGCAACAATAGAACTG--ATATATACCCAGTTTTAGGTTGTG--TG-TATATAAA
gi|19398                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAAAGTATGCTGCAACAATAGCAATG--ATATTTATCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19399                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----AGT-G--AAAA-CAAACGTACGCTGCAGCAATACCATGG--ATATATACCTAGTTTTAAGTTGTT--TG-TATATAAA
gi|19400                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGAAAA---TATC----TTT-G--AAAA-CAAACGTACACTGCAACAATAGCATTG--ATATATAC
gi|19401                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---TATC----TGT-A--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAtggtt
gi|19402                      :                                                                                                                                                                                                                                                                                                                                                      TGTAATTTGAAGACAA---CATCATTCTTT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTTTC--CG-TATATAAA
gi|19403                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19404                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19405                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19406                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGATAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATATTACTG--ACATATACCCAGTTTTATGTTGTT--TG-TATATGAA
gi|19407                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAAGTTGTT--TG-TATATGAA
gi|19408                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTTAAGACAA---CAAC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTT--ACATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19409                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19410                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGT
gi|19411                      :                                                                                                                                                                                                                                                                                                                                                       GTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAACCTTACCCTGCAACAATAGTACTG--ACATATACCTAGTTTTAGGATGTT--TG-TATATGAA
gi|19412                      :                                                                                                                                                                                                                                                                                                                                                        TAGTTTGAAGACCA---GGTC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCTCTG--ATATGTACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19413                      :                                                                                                                                                                                                                                                                                                                                                        TAATTTGAAGAAAAAAATATC----TTT-G--AAA--TAAATATATGCTGCAATGATAGCACAA--GTATATACCTTAATATGGGTTGGT--TGTTATATAAA
gi|19414                      :                                                                                                                                                                                                                                                                                                                                                                                                   TACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA

lowQualScore                  :                                                                                                                                                                                                                                                                                      222222222222                               11111111111111111111                                                                                                          
lowQualScore                  :                   1                                                                    0   0  1    1      8      8                0                                    0          2                      9                                           0  1               1            000000000000    0  2       777   55 4 1  4 99999999999999999999                 111    2222   1 11    1                           22                        11  1        
lowQualScore                  :                   .                                                                    .   .  .    .      .      .                .                                    .          .                      .                                           .  .               .            ............    .  .       ...   .. . .  . ....................                 ...    ....   . ..    .                           ..                        ..  .        
lowQualScore                  :                   0                                                                    4   6  0    4      0      0                2                                    2          5                      8                                           8  4               0            555555555555    7  3       000   55 0 4  9 11111111111111111111                 888    2222   0 44    0                           88                        55  1        
consensus                     : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
Reference ( family-486 )      : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19369                      : AGCTGAACGGTTTCAATTAAACTCGCTTCAGTGATAAATTTAACCGGTTATAATGGTAATATAGTCTATGCAATTAATAAACAATGTTGCTGAGTTGCTTGATTTT-TTCTTG-ACGGGACACCAACTTCCGAAAGCTTAATGTTCTGGCGGGATACCTGTAATTTCCGGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATCCAACAACATATTGAGGTTATTTTTATATAATATCTGTTCACTAGTCGGGGTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTTT---------T----------TTGTAA-TTGAAGAAAA---CATC----TTTGG--AAAA-AAAAAATACCCTGCAACAATATCACTT--ATATATACCCGGTTTAAGGTTGTT--GG-TATATTAA
gi|19370                      : AGCTGAATGGTTTCAATTAAACTTGCTTCAGTGATAAATTTTAATGGTTATAATGGTAACCCAGTCTGTGCAATTAATAAACAATGTGGACAAGTTGCTCGTTTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCCGAATGTTCCGGTGGGATACATGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGATGAAAATCCTATTCAACAACATATTGTGGTTATTTTTATATACTATACACTCACTTGTCAGGTTAAATCATAAAT------------GACTGTCACACTATG---ACA--A-TTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-T--TAAA-AAAACATACGCTGCAACAATATTACTA--ATATATACCCAGTTTTAGGTTGTT--GG-TATATTAA
gi|19371                      : AGCTGAATGGTTTCAATTAAACTCGCTTCAGTGATAAATTTTACCAGTTATAATGGTAACCCAGTCTGTTTAATTAATAAACAATGTTGCTAAGTTGCTCAATTTT-TTCTTG-ACGGGACACCAACTTTGAAAAGCTGAATGTTCTAGCAGGATACCTGTAATTCCAAGAGCTGTCT-AATATATAAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAA-ATGCGCTCACTCTTCGGGTTAAATAATAAAT------------GACTGTAAAGCCATG---ACA--ACCTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-G--AAA---AAACGTATGCTGCAACAATATTACTA--ATATATACCCGG-TTTAAGTTGTT--GG-TATATTAA
gi|19372                      : AGCTGAATGGTTTCAATTCAACTCGTTTCAGTGATAAATTATACTGGTT-TAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCTCTTAGATGCTTGATTTA-TCATTGTGCATGATACTAA
gi|19373                      : AGCTGAATGGTTCCAATACAACTCGCTTCAGTAGTGAATTTTACCAGTTATAATGGTAATCCAGTCTGTATAATAAATAATCAATGTTGCTAAGATGCTTGATTTaacccgagccggttcccggcagcctgt
gi|19374                      : AGCTGAATTGTTTGAATGCAACTCGCTTCAGTGATGAATTTTACCAGTTATGATGGTAATCCACTCTGTGTTATAAATAAACAATGTCGCTAAGATGCTTGATT
gi|19375                      : AGTTGAATGGTTTCAAATCAACTAACTTCAGTGATAA----------------TGGTAATCTAGTCTGTGTAATTAA
gi|19376                      :  GCTGAATGGTTTCAATTAAACTTTCTTCAGTGATAAATTTTACCGGTTAGAATGATAACCCAGTCTATTCAATTAATAAACAATGTCGCTTAGTTGCTTGATTTTCTTCTTG-ACGGGACATCAACTTTAGAAAGCTGTGTGTTCCGGCGGGATACCTGTAATTCCTAGAGCTGTTTCAATATTTTAGGTATATCACTGG--GAAAATCATATTCAACAACATATTGAGGTTATTTTTATATAATATACACTCACTCGTTGGGGTAAATCATAAAT------------GACGGTCACGCTATG---ACA--A-TATTCT---------T----------TTGTATTTTGAAGAAAA---CGTC----TTT-G--AGAA-AAAATGTATGCTGCAACAATATCACTA--ATATATACCTGGTTTTAAGTTATT--GG-TATATTAA
gi|19377                      :   CTGAATGGTTTCAATTCAACTCG--------ATAAATTTTACTGGTTATAATGGTAA
gi|19378                      :               AATTGAACTTGCTTCAGTGATAAATTTTACCAGTTAGAATGGTAATCTAG
gi|19379                      :                                                                                                                                                                                                                                        TTGTTTTTATATAATATGCACTCACTCGTCAGGATAAATCATAAAT------------GACTGTCACGCCATG---ACA--T-TTTTTT---------T----------CTGTAATTTGAAGAAAA---CATC----TTT-GAAAAAA-AAAACGTTTGCTGCAACAATATCACTA--ATTCATACCCAGTTTCAGGGTCTT--AG-TATATTAActa
gi|19380                      :                                                                                                                                                                                                                                                                    TCGGGCTA--TCATAAATTCTAAGTTCATGGACCTTTGGGCCATG---ACA--A-TATT-----------T----------TTGCGATTTGAAGAAAA---CATC----TTT-G--AAAA-CAG-TGTACACTGCAACAATAGTGCTGATATATATACCCGGTATTAGGTTATT--GG-TATATA
gi|19381                      :                                                                                                                                                                                                                                                                               CATAAAC------------GATTATAATTATAT----ACATTA-TTTTTT---------TCCGCGCAATATTGTAGTTTGAAGACAA---CATC----TGT-A--AAAC-CAAACATACACTGCAACAATAGCACTG--ATTTATACCCAGTTTTAGGTTGTT--TG-TATGTAAAtaa
gi|19382                      :                                                                                                                                                                                                                                                                               CATAGAT------------GATTATGAT--CATGTACATA--A-TTTTCTGCGAAGCAATA---------TTGTAGTTTGAAGACA------TC----TGT-G--AAAA-CAAACATACGCTGCAACAATAGCACTG--ATATATACCCAGTTTAAGGTTGTT--TG-TATATAAA
gi|19383                      :                                                                                                                                                                                                                                                                               CATACAT------------AATTTTC-CGCGA-A---ACA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATAT
gi|19384                      :                                                                                                                                                                                                                                                                               CATACAT------------AACTTTC-CGTGGTG----CA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19385                      :                                                                                                                                                                                                                                                                                                                                                      TATAGTTTGCAGACAT---CAAC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAACCAGTTTTAGGTTGTTAATG-TATATAA
gi|19386                      :                                                                                                                                                                                                                                                                                   catagatgattatgatcacatacaaaatttttcgcgaagcaatacT---------T----------TTATAATTTGAAGACAA---CATC----TTT-G--AAAA-CAAAAGTATGCTGTAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19387                      :                                                                                                                                                                                                                                                                                                                                T---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATATCACTG--ATACATACCCAGTTTTAGATTGTT--TG-TATATAAA
gi|19388                      :                                                                                                                                                                                                                                                                                                                                 ---------T----------TGGTAATT--AAGGC-----TATC----TGT-G--AAAA-CAAATGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19389                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGACGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19390                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19391                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTGGTTTGAAGGCAA---CATC----TGT-G--AAAA-CAAACATACGCTGCAACAGTAGCACTG--ATATATACTCAGTTTTAGGTTGTT--TG-TATAT
gi|19392                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAATGTATGCTGCAACAAAAGCACTGATATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19393                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTTAGTTGTT--TG-TATATAAA
gi|19394                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGATAA---CATC----TGT-A--AAAA-CAAACGTATGCTGCAACAACAGCACTG--ATATATACCCAGTTTCAGGTTGTT--TG-TATATAAA
gi|19395                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAGGAAAA---TATC----TTT-A--AAAAGCAAACGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAGTTTGTT--AG-TGT
gi|19396                      :                                                                                                                                                                                                                                                                                                                                           ----------TTTTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATGTACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19397                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TTT-T--AAAA-GTAACGTGCGCTGCAACAATAGAACTG--ATATATACCCAGTTTTAGGTTGTG--TG-TATATAAA
gi|19398                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAAAGTATGCTGCAACAATAGCAATG--ATATTTATCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19399                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----AGT-G--AAAA-CAAACGTACGCTGCAGCAATACCATGG--ATATATACCTAGTTTTAAGTTGTT--TG-TATATAAA
gi|19400                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGAAAA---TATC----TTT-G--AAAA-CAAACGTACACTGCAACAATAGCATTG--ATATATAC
gi|19401                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---TATC----TGT-A--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAtggtt
gi|19402                      :                                                                                                                                                                                                                                                                                                                                                      TGTAATTTGAAGACAA---CATCATTCTTT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTTTC--CG-TATATAAA
gi|19403                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19404                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19405                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19406                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGATAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATATTACTG--ACATATACCCAGTTTTATGTTGTT--TG-TATATGAA
gi|19407                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAAGTTGTT--TG-TATATGAA
gi|19408                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTTAAGACAA---CAAC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTT--ACATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19409                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19410                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGT
gi|19411                      :                                                                                                                                                                                                                                                                                                                                                       GTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAACCTTACCCTGCAACAATAGTACTG--ACATATACCTAGTTTTAGGATGTT--TG-TATATGAA
gi|19412                      :                                                                                                                                                                                                                                                                                                                                                        TAGTTTGAAGACCA---GGTC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCTCTG--ATATGTACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19413                      :                                                                                                                                                                                                                                                                                                                                                        TAATTTGAAGAAAAAAATATC----TTT-G--AAA--TAAATATATGCTGCAATGATAGCACAA--GTATATACCTTAATATGGGTTGGT--TGTTATATAAA
gi|19414                      :                                                                                                                                                                                                                                                                                                                                                                                                   TACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA


blockSeqs                     :                   A                                                                           T    C      C      T                                                                C                      A                                              A               T            TCTAAGTTCATG       A       TAC   TT C T  A TCCGCGCAATA                          AAA    ATTC   . AA    G                           AT                        AA  T
blockSeqs                     :                   A                                                                           T    C      .      .                                                                C                      T                                              G               T            .                  A       .     .  . T  A GCGAAGCAATA                          .      .      . .     .                           AT                        .   .
blockSeqs                     :                   C                                                                           A    T      .      .                                                                .                      .                                              A               G            .                  A       .     .  . A  C T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   C                                                                           A    T      .      .                                                                                                                                      G               A            .                  A       .     .  . T  T T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   C                                                                           A    T                                                                                                                                                                    C            .                  G       .     .  . A  T T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   C                                                                           T    T                                                                                                                                                                                 .                  A       .     .  . T  C T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   A                                                                                                                                                                                                                                                                  .                  A       .     .  . T  A T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   C                                                                                                                                                                                                                                                                  .                  .       .     .  . A  A T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                   G                                                                                                                                                                                                                                                                  .                  .       .     .  . A  . T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                 T                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                 .                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                 .                                    .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                         .   .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                              
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                      .      .      . .     .                           .                              
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                        .                              


blockSeqCons                  : 
originalCons                  : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
finalCons                     : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA

lowQualScore                  :                                                                                                                                                                                                                                                                                      222222222222                               11111111111111111111                                                                                                          
lowQualScore                  :                   1                                                                    0   0  1    1      8      8                0                                    0          2                      9                                           0  1               1            000000000000    0  2       777   55 4 1  4 99999999999999999999                 111    2222   1 11    1                           22                        11  1        
lowQualScore                  :                   .                                                                    .   .  .    .      .      .                .                                    .          .                      .                                           .  .               .            ............    .  .       ...   .. . .  . ....................                 ...    ....   . ..    .                           ..                        ..  .        
lowQualScore                  :                   0                                                                    4   6  0    4      0      0                2                                    2          5                      8                                           8  4               0            555555555555    7  3       000   55 0 4  9 11111111111111111111                 888    2222   0 44    0                           88                        55  1        
consensus                     : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
Reference ( family-486 )      : AGCTGAATGGTTTCAATTNAACTCGCTTCAGTGATAAATTTTACCGGTTATAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCGCTAAGNTGCTCGATTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCTGAATGTTCCGGCGGGATACCTGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAATATGCGCTCACTCGTCGGGNTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTNT---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19369                      : AGCTGAACGGTTTCAATTAAACTCGCTTCAGTGATAAATTTAACCGGTTATAATGGTAATATAGTCTATGCAATTAATAAACAATGTTGCTGAGTTGCTTGATTTT-TTCTTG-ACGGGACACCAACTTCCGAAAGCTTAATGTTCTGGCGGGATACCTGTAATTTCCGGAGCTGTTTCAATATTTTAGGTATATCGCTGGTTGAAAATCCTATCCAACAACATATTGAGGTTATTTTTATATAATATCTGTTCACTAGTCGGGGTAAATCATAAAT------------GACTGTCACGCCATG---ACA--A-TTTTTT---------T----------TTGTAA-TTGAAGAAAA---CATC----TTTGG--AAAA-AAAAAATACCCTGCAACAATATCACTT--ATATATACCCGGTTTAAGGTTGTT--GG-TATATTAA
gi|19370                      : AGCTGAATGGTTTCAATTAAACTTGCTTCAGTGATAAATTTTAATGGTTATAATGGTAACCCAGTCTGTGCAATTAATAAACAATGTGGACAAGTTGCTCGTTTTT-TTCTTG-ACGGGACACCAACTTTGGAAAGCCGAATGTTCCGGTGGGATACATGTAATTCCCAGAGCTGTTTCAATATTTTAGGTATATCGCTGGATGAAAATCCTATTCAACAACATATTGTGGTTATTTTTATATACTATACACTCACTTGTCAGGTTAAATCATAAAT------------GACTGTCACACTATG---ACA--A-TTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-T--TAAA-AAAACATACGCTGCAACAATATTACTA--ATATATACCCAGTTTTAGGTTGTT--GG-TATATTAA
gi|19371                      : AGCTGAATGGTTTCAATTAAACTCGCTTCAGTGATAAATTTTACCAGTTATAATGGTAACCCAGTCTGTTTAATTAATAAACAATGTTGCTAAGTTGCTCAATTTT-TTCTTG-ACGGGACACCAACTTTGAAAAGCTGAATGTTCTAGCAGGATACCTGTAATTCCAAGAGCTGTCT-AATATATAAGGTATATCGCTGGTTGAAAATCCTATTCAACAACATATTGAGGTTATTTTTATATAA-ATGCGCTCACTCTTCGGGTTAAATAATAAAT------------GACTGTAAAGCCATG---ACA--ACCTTTAT---------T----------TTGTAATTTGAAGAAAA---CATC----TTT-G--AAA---AAACGTATGCTGCAACAATATTACTA--ATATATACCCGG-TTTAAGTTGTT--GG-TATATTAA
gi|19372                      : AGCTGAATGGTTTCAATTCAACTCGTTTCAGTGATAAATTATACTGGTT-TAATGGTAATCCAGTCTGTGTAATTAATAAACAATGTCTCTTAGATGCTTGATTTA-TCATTGTGCATGATACTAA
gi|19373                      : AGCTGAATGGTTCCAATACAACTCGCTTCAGTAGTGAATTTTACCAGTTATAATGGTAATCCAGTCTGTATAATAAATAATCAATGTTGCTAAGATGCTTGATTTaacccgagccggttcccggcagcctgt
gi|19374                      : AGCTGAATTGTTTGAATGCAACTCGCTTCAGTGATGAATTTTACCAGTTATGATGGTAATCCACTCTGTGTTATAAATAAACAATGTCGCTAAGATGCTTGATT
gi|19375                      : AGTTGAATGGTTTCAAATCAACTAACTTCAGTGATAA----------------TGGTAATCTAGTCTGTGTAATTAA
gi|19376                      :  GCTGAATGGTTTCAATTAAACTTTCTTCAGTGATAAATTTTACCGGTTAGAATGATAACCCAGTCTATTCAATTAATAAACAATGTCGCTTAGTTGCTTGATTTTCTTCTTG-ACGGGACATCAACTTTAGAAAGCTGTGTGTTCCGGCGGGATACCTGTAATTCCTAGAGCTGTTTCAATATTTTAGGTATATCACTGG--GAAAATCATATTCAACAACATATTGAGGTTATTTTTATATAATATACACTCACTCGTTGGGGTAAATCATAAAT------------GACGGTCACGCTATG---ACA--A-TATTCT---------T----------TTGTATTTTGAAGAAAA---CGTC----TTT-G--AGAA-AAAATGTATGCTGCAACAATATCACTA--ATATATACCTGGTTTTAAGTTATT--GG-TATATTAA
gi|19377                      :   CTGAATGGTTTCAATTCAACTCG--------ATAAATTTTACTGGTTATAATGGTAA
gi|19378                      :               AATTGAACTTGCTTCAGTGATAAATTTTACCAGTTAGAATGGTAATCTAG
gi|19379                      :                                                                                                                                                                                                                                        TTGTTTTTATATAATATGCACTCACTCGTCAGGATAAATCATAAAT------------GACTGTCACGCCATG---ACA--T-TTTTTT---------T----------CTGTAATTTGAAGAAAA---CATC----TTT-GAAAAAA-AAAACGTTTGCTGCAACAATATCACTA--ATTCATACCCAGTTTCAGGGTCTT--AG-TATATTAActa
gi|19380                      :                                                                                                                                                                                                                                                                    TCGGGCTA--TCATAAATTCTAAGTTCATGGACCTTTGGGCCATG---ACA--A-TATT-----------T----------TTGCGATTTGAAGAAAA---CATC----TTT-G--AAAA-CAG-TGTACACTGCAACAATAGTGCTGATATATATACCCGGTATTAGGTTATT--GG-TATATA
gi|19381                      :                                                                                                                                                                                                                                                                               CATAAAC------------GATTATAATTATAT----ACATTA-TTTTTT---------TCCGCGCAATATTGTAGTTTGAAGACAA---CATC----TGT-A--AAAC-CAAACATACACTGCAACAATAGCACTG--ATTTATACCCAGTTTTAGGTTGTT--TG-TATGTAAAtaa
gi|19382                      :                                                                                                                                                                                                                                                                               CATAGAT------------GATTATGAT--CATGTACATA--A-TTTTCTGCGAAGCAATA---------TTGTAGTTTGAAGACA------TC----TGT-G--AAAA-CAAACATACGCTGCAACAATAGCACTG--ATATATACCCAGTTTAAGGTTGTT--TG-TATATAAA
gi|19383                      :                                                                                                                                                                                                                                                                               CATACAT------------AATTTTC-CGCGA-A---ACA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATAT
gi|19384                      :                                                                                                                                                                                                                                                                               CATACAT------------AACTTTC-CGTGGTG----CA--A-TATTAT------------------------AGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19385                      :                                                                                                                                                                                                                                                                                                                                                      TATAGTTTGCAGACAT---CAAC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAACCAGTTTTAGGTTGTTAATG-TATATAA
gi|19386                      :                                                                                                                                                                                                                                                                                   catagatgattatgatcacatacaaaatttttcgcgaagcaatacT---------T----------TTATAATTTGAAGACAA---CATC----TTT-G--AAAA-CAAAAGTATGCTGTAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19387                      :                                                                                                                                                                                                                                                                                                                                T---------T----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATATCACTG--ATACATACCCAGTTTTAGATTGTT--TG-TATATAAA
gi|19388                      :                                                                                                                                                                                                                                                                                                                                 ---------T----------TGGTAATT--AAGGC-----TATC----TGT-G--AAAA-CAAATGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19389                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGACGACAA---CATC----TGT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19390                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19391                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTGGTTTGAAGGCAA---CATC----TGT-G--AAAA-CAAACATACGCTGCAACAGTAGCACTG--ATATATACTCAGTTTTAGGTTGTT--TG-TATAT
gi|19392                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAATGTATGCTGCAACAAAAGCACTGATATATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19393                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTG--ATATATACCCAGTTTTTAGTTGTT--TG-TATATAAA
gi|19394                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGATAA---CATC----TGT-A--AAAA-CAAACGTATGCTGCAACAACAGCACTG--ATATATACCCAGTTTCAGGTTGTT--TG-TATATAAA
gi|19395                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAGGAAAA---TATC----TTT-A--AAAAGCAAACGTACGCTGCAACAATAGCGCTG--ATATATACCCAGTTTTAGTTTGTT--AG-TGT
gi|19396                      :                                                                                                                                                                                                                                                                                                                                           ----------TTTTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATGTACCCAGTTTTAAGTTGTT--TG-TATATAAA
gi|19397                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TTT-T--AAAA-GTAACGTGCGCTGCAACAATAGAACTG--ATATATACCCAGTTTTAGGTTGTG--TG-TATATAAA
gi|19398                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAAAGTATGCTGCAACAATAGCAATG--ATATTTATCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19399                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGACAA---CATC----AGT-G--AAAA-CAAACGTACGCTGCAGCAATACCATGG--ATATATACCTAGTTTTAAGTTGTT--TG-TATATAAA
gi|19400                      :                                                                                                                                                                                                                                                                                                                                           ----------TTGTAGTTTGAAGAAAA---TATC----TTT-G--AAAA-CAAACGTACACTGCAACAATAGCATTG--ATATATAC
gi|19401                      :                                                                                                                                                                                                                                                                                                                                           ----------TTATAGTTTGAAGACAA---TATC----TGT-A--AAAA-CAAACGTATGCTGCAACAATAGCACTG--ATATATAtggtt
gi|19402                      :                                                                                                                                                                                                                                                                                                                                                      TGTAATTTGAAGACAA---CATCATTCTTT-G--AAAA-CAAACGTACGCTGCAACAATAGCACTG--ATATATACCCAGTTTTAGGTTTTC--CG-TATATAAA
gi|19403                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19404                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19405                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19406                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGATAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATATTACTG--ACATATACCCAGTTTTATGTTGTT--TG-TATATGAA
gi|19407                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATATACCCAGTTTTAAGTTGTT--TG-TATATGAA
gi|19408                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTTAAGACAA---CAAC----TGT-G--AAAA-CAAACATATGCTGCAACAATAGCACTT--ACATATACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19409                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA
gi|19410                      :                                                                                                                                                                                                                                                                                                                                                      TGTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAAACGTACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGT
gi|19411                      :                                                                                                                                                                                                                                                                                                                                                       GTAGTTTGAAGACAA---CATC----TGT-G--AAAA-CAACCTTACCCTGCAACAATAGTACTG--ACATATACCTAGTTTTAGGATGTT--TG-TATATGAA
gi|19412                      :                                                                                                                                                                                                                                                                                                                                                        TAGTTTGAAGACCA---GGTC----TGT-G--AAAA-CAAACGTATGCTGCAACAATAGCTCTG--ATATGTACCCAGTTTTAGGTTGTT--TG-TATATAAA
gi|19413                      :                                                                                                                                                                                                                                                                                                                                                        TAATTTGAAGAAAAAAATATC----TTT-G--AAA--TAAATATATGCTGCAATGATAGCACAA--GTATATACCTTAATATGGGTTGGT--TGTTATATAAA
gi|19414                      :                                                                                                                                                                                                                                                                                                                                                                                                   TACCCTGCAACAATAGTACTG--ACATTTACCCAGTTTTAGGTTGTT--TG-TATATGAA