lowQualScore : 2222222 11111
lowQualScore : 2 4 0 111 0 00 00 0 3 1111111 1 111 2 1 00 0 1 66666
lowQualScore : . . . ... . .. .. . . ....... . ... . . .. . . .....
lowQualScore : 9 6 6 999 6 88 88 6 4 7777777 2 666 9 2 88 6 3 77777
consensus : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TT--TGTTT--CGT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGAA
Reference ( gi|113511 ) : GGTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TT--TGTTT--TGT-G-A---A---T-T---T-C-ATGA--AAT-A-T----AAAGAA
gi|113512 : GGTTCATCTCCATGCAGAGACGGC-GTT---TGTC-TT--TGTTT--TTT-G-A---A---T-T---T-C-ATGA--AAT-A-T----TAAGAA
gi|113473 : GGTTCATCTCCATACAGAGATGGT-GTT---TGTC-TT--TGTTT--CAT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGGA
gi|113472 : tGGTTTATCTCTATAAAGAGACGGC-GTT---CGTC-TT--TGTTT--TGG-G-A---AT--T-T---T-C-ATGA--ATT-A-T----TAAGAA
gi|113515 : tGGTTCATCTCCATTCAGAGATGGC-ATT---TGTC-TT--TGTTT--TGT-G-A---AT--T-T---T-T-AT-A--AAT-A-T----TAAGAA
gi|113516 : GGTTCATCTCCATTCTGAGACAGC-ATT---TGTC-TT--TGTTT--TGT-G-A---AT--T-T---T-C-AT-A--AAT-A-T----TAAGAA
gi|113479 : GGTTTATCTCTATACAGAGATGCT-GTT---TGTA-TT--TGTTT--TAT-G-A---AT--T-T---T-C-GTGA--AAT-A-T----CAAGAA
gi|113474 : tGGTTCATTGCTATACAGAGACGAC-GTT---CGTC-TT--TGTTT--CGT-T-A---AT--T-T---T-C-ATGT--ACT-A-T----TAAGAA
gi|113490 : tGGTTTATTTCTGTGCAGAGATGGC-GTT---CATCTTT--TGTTT--TGT-G-A---AT--T-T---T-C-ATGA--AAA-A-T----
gi|113488 : tGGTTCATCTCAATACAGTGGTGGT-GTT---CTTC-TT--TGTTT--TGT-G-A---AT--T-T---T-C-ATTC--AAT-A-T----TAAGAAtagtaa
gi|113476 : tGGTTCATCTCTCCACAGAGACGGG-TTT---CGTC-TT--TGTTT--CGT-GTA---T---T-T---T-C-TTGA--AAT-A-T----TAAGAA
gi|113518 : tGATTCATCTCTATACAAGGGCAGC-GTT---CGTC-TT--TATTT--CGT-G-A---A---T-T---TAA-ATGC--AAT-A-T----TAAGAA
gi|113484 : GGTTCATCTCTGTACACAGACCGT-GTT---CGTC-TT--TGTTT--CGT-G-A---AT--T-T---T-C-ATTA--AAA-A-T----TAAAAA
gi|113482 : tGGTTCATTTCTATACAGAGCTGGC-ATT---CATC-TT--T-CTT--TGT-G-A---AT--T-T---T-C-AGGA--AAT-A-T----TAAGAA
gi|113486 : tGGTTCATCTCTATACAGAGATGGT-GTG---CGCC-GC--TGTTT--CAT-G-A---AT--T-T---T-C-ATGA--AAT-A-A----TAAGAA
gi|113487 : tGGTTCACCTTCATACAGA--CGGC-GTT---CATC-TT--TGTTT--TGT-GTA---T---T-T---T-C-ATGC--GAT-ATT----ATAGAA
gi|113499 : tGGTTCATCTTCATACAGA--TGGC-GTT---CATC-TT--TGTTT--TGT-GTA---T---T-T---T-C-ATGC--GAT-ACT----ATAGAA
gi|113519 : tGATTCGTCTCTATACAAGGGCAGC-GTT---CGTC-TT--TATTT--CGT-G-A---A---T-T---TAA-ATGC--AAT-A-T----TAAGAA
gi|113489 : GGTTCACCTCTATACCGAGACAGT-GTT---CGTC-TT--TGTAT--TGT-G-A---CT--T-T---T-C-ATTA--AAT-A-T----
gi|113494 : tGGTTCATCTCTGTACAGAGATGGC-GTT---CATC-TT--TGTTTCCTGT---A---C---T-T---T-T-ATGT--AAT-A-T----TTAGAAtagg
gi|113517 : tGGTTCATCTTTATACAGGAACAGT-GTTGAACATC-TT--T-TTT--TGT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TGAGAA
gi|113496 : GGTTCATCTCTATACAAAGATAAC-AAT---CATC-TT--GGTTT--TGT-G-A---AT--T-T---T-C-ACAA--AAT-A-T-----AAGAA
gi|113495 : tGATTCATTTCTGGACAGAGACAGC-ATT---CATC-TT--TGTTA--CAT-G-A---A---T-T---T-TGATGA--AAT-A-T----TAAGAA
gi|113500 : tGGTTCATCTCTATACAGAGATGAT-GTG---CGCT-GC--TGTTT--CAT-G-A---A---TAT---T-C-ATGA--AATAA-T----AAAAA
gi|113501 : tGGTTCATCTCTATACAGCGGTGGC-ATT---TGTC-TT--TGTGG--CGT-G-A---AC--T-T---T-C-ATGA--AAT-G-T----
gi|113524 : tGGTCAATCTTCTTACAAAGACGGC-GTT---CGTC-AT--TGTTC--TGT-G-ATTTT---T-T---T-C-ATGA--AAT-G-T----TAAtgacaa
gi|113523 : GGTACATATCCATTTAGATACGTC-ATT---TGTC-TT--TGTTT--TGT-G-A---A---TCT---T-C-ATAA--AGT-A-T----
gi|113497 : GATTCATATCTATACAAGTACGGC-GTT---CGTC-TA--TGTTT--TGT-G-A---AT--T-T---T-C-AAGA--AAtagaaa
gi|113502 : tGGTTCATCTACATACAGACTTGGC-ATT---CGTC-TT--TGTTT--CGT-G-A---AT--T-T---T-C-ATattat
gi|113485 : tGATCCATCGCTATAAAGAGACGGG-GTT---CGTC-TT--TGTTT--CAT-G-A---AT--T-T---T-C-ACGA--ATT-A-T----
gi|113498 : tGGTTTGTGTCTATACAGAG--GGTTGTT---CATC-TT--T--TT--TGT-G-A---A---T-T---TTC-ATGA--AAT-A-T----TAAGAAtgataa
gi|113510 : tGGATCATCTCTATGCATGGACGGC-TTT---CGTC-TT--CG-----TGT-G-----C---T-T---T-C-GTTA--AAT-A-T----TAAGAA
gi|113504 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TT--TGTGG--CGT-G-A---AT--T-T---T-C-ATGA--AAT-G-T----
gi|113503 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TT--TGTGG--CGT-G-A---AT--T-T---T-C-ATGA--AAT-G-T----tgacaa
gi|113505 : tGGTTCATCTCTATACACAGACGAC-GTT---CGTC-TT--TGTTT--tgacaa
gi|113506 : tGGTTCATCTCTATAGAGAAATGGC-ATT---TGTC-TT--TGTTT--CAT-G-A---A---T-T---T-
gi|113520 : tGGTTCATCTTTTTAAAGAGACAGC-GTT---CGTC-AT--TGTTT--TGT-------ATCTT-T---T-C-ATGA--GAT-G-T----TAA
gi|113521 : GGTTTGTCTTTATACAGGAACAGT-GTTGATCATC-TT--T-TTT--TGT-G-A---A---T-T---TTC-ATGA--AAT-A-T----
gi|113522 : GGTTCTTCTCTATACAGGGACTGT-GTT---TGTC-AT--TGTTT--CAG-G-T---A---T-T---TTC-ATGA--AAT-T-T----TAAGAAtgag
gi|113509 : GGTT-ATCTCTATACAGAGGTGGT-GAT---TGTC-TT---------TGT-G-A---AT--T-T---T-T-ATGA--AAT-A-TTTTAAAAGAA
gi|113513 : tGATTTATCTTTTTACAGGGACGGC-GTT--------TT--TGTTT--TGT-G-AT--T---T-T---T-C-ATGA--AAT-G-T----TAA
gi|113507 : GATTCATCTCTTTATAGAAATGGC-GTT---TGTC--T--TGTTT--TAT-G-T---G---T-T---T-TAATAA--AAT-A-T----TAAAAA
gi|113481 : tGGTTCATCTCTATACAGGAATGGA-ATT---CGTC-TC--TGTTT--CGT-G-A---A---
gi|113477 : tGGTTCATTTCTATACAGCGATGGC-GCT---CGTC--T--TGCTT--CGT-G-A---A---T-
gi|113508 : tGGTCCATCTCTTTATAGAGACGAC-ATT----GTC--T--TGTTT--TGC-ATA---T---T-T---T-C-ATGA--GAT---T----TAAGAA
gi|113514 : tGGTTCATCTTTTTAAAGAGACAGA-TTT---CGTC-TT--TATTT--TGT-------A---T-TTTGT-C-ATGA--GAT-G-T----TAA
gi|113525 : GTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TT--TGTTT--TGT-G-A---A---T-T---T-C-ATGA--AAT-A-T----TATGAA
gi|113529 : GTTCAGCTCCATGCAGAGACAGC-TTT---CGTC-TT--TGTTG--TGT-G-A---A---T-T---T-C-ATGA--AAT-A-T----TATGAA
gi|113526 : GTTCGTCT--ATAGAGAGGCGGC-GTT---CGTC-TT--TGTTT--TGT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAATAA
gi|113528 : GTTCATCTCTATAAGAAGACGGC-GTA---CATC-TT--TGTTT--CGT-G-A---AC--T-T---T-C-ATAA--AAT-A-T----TAAAAA
gi|113480 : GTTCCTCTCTTTACACAGACGAT-GGT---CGTC-TT--TGTTT--CGT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGAA
gi|113527 : taGTCCATCTTTATACAGAGACGAT-GTT---CATC-TT--TATTT--CGC-A-A---AT--T-T---T-C-ATAA--AAT-A-T----TAAGAA
gi|113493 : GCTCATCTCTATACAGATACGGC-GTT---TGTC-TTTATGTCT--TGT---A---T---T-T---T-C-ATGA--AAT-A-T----TATGAA
gi|113530 : taGTTCATTGCCATACAGAGACGGT-GTT---CATC-TT--TGTTT--TGT-GTA---C---T-T---C-C-ATGA--
gi|113483 : GTTCATCTCTCTACATCAACGGC-ATT---CATC-TT--TGTTT--TAT-G-A---AT--T-T---T-T-ATGA--AAT-A-T----
gi|113531 : taGTTCATCTTTTTACAGAGACTAC-GTT---CATC-AT--TGTTT--TGT-G-GT--T---T-T---T-C-ATGA--AAT-G-T----TAAta
gi|113532 : GTTCATTTTTTTACAGCGACTGT-GTT---CGTC-AT--TGTTT--TGT-G-AT--T---T-T---T-C-ATGA--AAT-G-T----TAA
gi|113533 : GTTCGTCTCCATACAGAGACGGC-GTT---CGTC-
gi|113475 : TTCATCTCTATATAGAGATGGC-GTT---CGTC-TT--TGTTT--TGT-T-A---A---T-T---T-T-ATGAATAAT---T----AAGGA
gi|113534 : tgtTTTATCTTTTTACAGAGACGGC-GTT---C-----T--TGTTT--TGT-G-AT--T---T-T---T-C-ATGA--AAT-G-T----TAA
gi|113535 : TCATCTGTATACATAGATAGC-GTT---GGTC-TT--TGTTT--CGC-G-A---AG--T-TG--T-C-ATAA--A
gi|113536 : CATCTCCATGCAGAGACGGC-GTT---CGTC-TT--TGTTT--TTT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGAA
gi|113537 : CATATCAATGCAGAGACGGC-GTT---CGTC-TT--TGTTT--TTT-T-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGAA
gi|113492 : ATCTGTATACAGAGACGGC-GTT---CGTT-TG--TGTTT--TGT-G-A---AC--T-T---T-C-ATGA--TAT-A-T----
gi|113538 : tggtaaTCTCTATACAGAGACGTC-GTT---CGTC-TT--T-TAT--CGT-GTA---T---T-T---T-C-ATGT--AAT-A-T----TAAGAAtagaaa
gi|113539 : TTTCTGTACAAAGGCGGC-ATT---TGCC-TT--TGTTG--TGT-G-A---AC--T-T---T-C-ATGA--AAC-A-T-----AAGAA
gi|113541 : CTATGCAGACGCGGC-ATT---TGAT-TT--TCTTT--CAT-G-A---AT--T-T---T-C-ATGA--AAT-A-T----TAAGAA
gi|113478 : CTATACAGAGACGGC-ATT---CGGC-TT--TGTTT--TGT-G-A---T---T-T---T-
gi|113491 : tggatcgtaaCATACAGAGACGGC-GTC---CGAC-TT--TGTTT--CGT-G-A---AT--T-T---T-C-ATGA--AGT-A-T----TAAttcgcaacattttaaaaa
gi|113543 : tgattcacaATACGGGGACGCC-GTT---TGTC-TT--TGTTT--CGTCA-A---A---T-T---T-C-ATGA--ACT-A-T----TAAGAA
gi|113542 : ATACAAAGTCGAC-GTC---CGTC-TT--TGATT--CGT-G-A---AT--T-T---T-C-ATGA--AAT-G-T----
gi|113540 : AAACGGC-GTT---TGTC-TT--TGTTT--CAT-A-A---T---T-T---T-C-AGGA--AAT-A-T----TAAAAAt
gi|113544 : tttttatacCGGC-GTT---TGTC-TT--TGTTT--TTT-G-A---AT--T-T---T-C-ATGA--AAT-A-
Alignments
lowQualScore : 0 111 0 11 0 00 1111 1
lowQualScore : . ... . .. . .. .... .
lowQualScore : 5 999 5 33 6 88 3333 3
consensus : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
Reference ( family-380 ) : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113472 : GGTTTATCTCTATAAAGAGACGGC-GTT---CGTC-TTTGTTTTGGGA--A-TTT--TCATGAATTATT----A-AGAA
gi|113473 : tGGTTCATCTCCATACAGAGATGGT-GTT---TGTC-TTTGTTTCATGA--A-TTT--TCATGAAATATT----A-AGGA
gi|113474 : tGGTTCATTGCTATACAGAGACGAC-GTT---CGTC-TTTGTTTCGTTA--A-TTT--TCATGTACTATT----A-AGAA
gi|113475 : tTTCATCTCTATATAGAGATGGC-GTT---CGTC-TTTGTTTTGTTA--A-TTT--T-ATGAATAATT----A-AGGA
gi|113476 : tgtGGTTCATCTCTCCACAGAGACGGG-TTT---CGTC-TTTGTTTCGTGT--A-TTT--TCTTGAAATATT----A-AGAA
gi|113477 : tGGTTCATTTCTATACAGCGATGGC-GCT---CGTC--TTGCTTCGTGA--A-T
gi|113478 : tCTATACAGAGACGGC-ATT---CGGC-TTTGTTTTGTGAT-T-TTT--TCGCAACATTTT----A-AAAA
gi|113479 : tggatcgtaaGGTTTATCTCTATACAGAGATGCT-GTT---TGTA-TTTGTTTTATGA--A-TTT--TCGTGAAATATC----A-AGAA
gi|113480 : tGTTCCTCTCTTTACACAGACGAT-GGT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113481 : taGGTTCATCTCTATACAGGAATGGA-ATT---CGTC-TCTGTTTCGTGA--A-
gi|113482 : tGGTTCATTTCTATACAGAGCTGGC-ATT---CATC-TTTCTTT-GTGA--A-TTT--TCAGGAAATATT----A-AGAA
gi|113483 : tGTTCATCTCTCTACATCAACGGC-ATT---CATC-TTTGTTTTATGA--A-TTT--TTATGAAATATT----A-
gi|113484 : taGGTTCATCTCTGTACACAGACCGT-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATTAAAAATT----A-AAAA
gi|113485 : tGATCCATCGCTATAAAGAGACGGG-GTT---CGTC-TTTGTTTCATGA--A-TTT--TCACGAATTATT----G-ATAA
gi|113486 : tGGTTCATCTCTATACAGAGATGGT-GTG---CGCC-GCTGTTTCATGA--A-TTT--TCATGAAATAAT----A-AGAA
gi|113487 : tGGTTCACCTTCATACAGA--CGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATATT----ATAGAA
gi|113488 : tGGTTCATCTCAATACAGTGGTGGT-GTT---CTTC-TTTGTTTTGTGA--A-TTT--TCATTCAATATT----A-AGAA
gi|113489 : tGGTTCACCTCTATACCGAGACAGT-GTT---CGTC-TTTGTATTGTGA--C-TTT--TCATTAAATATT----A-GG
gi|113490 : tGGTTTATTTCTGTGCAGAGATGGC-GTT---CATCTTTTGTTTTGTGA--A-TTT--TCATGAAAAATT----A-
gi|113491 : tATACAGAGACGGC-GTC---CGAC-TTTGTTTCGTGA--A-TTT--TCATGAAGTATT----A-gtaa
gi|113492 : tgattcacacATCTGTATACAGAGACGGC-GTT---CGTT-TGTGTTTTGTGA--A-CTT--TCATGATATATT----A-GAAA
gi|113493 : tggtaaGCTCATCTCTATACAGATACGGC-GTT---TGTC-TTTATGTCTTGT--A-TTT--TCATGAAATATT----A-TGAA
gi|113494 : taGGTTCATCTCTGTACAGAGATGGC-GTT---CATC-TTTGTTTCCTGT--A-CTT--TTATGTAATATT----T-AGAA
gi|113495 : tGATTCATTTCTGGACAGAGACAGC-ATT---CATC-TTTGTTACATGA--A-TTT--TGATGAAATATT----A-AGAA
gi|113496 : tGGTTCATCTCTATACAAAGATAAC-AAT---CATC-TTGGTTTTGTGA--A-TTT--TCACAAAATA-T----A-AGAA
gi|113497 : tGATTCATATCTATACAAGTACGGC-GTT---CGTC-TATGTTTTGTGA--A-TTT--TCAAGAAA-ATT----A-
gi|113498 : tGGTTTGTGTCTATACAGAG--GGTTGTT---CATC-TTT--TTTGTGA--A-TTT--TCATGAAATATT----A-AGAAt
gi|113499 : tGGTTCATCTTCATACAGA--TGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATACT----ATAGAA
gi|113500 : tGGTTCATCTCTATACAGAGATGAT-GTG---CGCT-GCTGTTTCATGA--A-TAT--TCATGAAATAAT----A-AAAA
gi|113501 : tGGTTCATCTCTATACAGCGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-CTT--TCATGAAATGTT----G-ACAA
gi|113502 : tGGTTCATCTACATACAGACTTGGC-ATT---CGTC-TTTGTTTCGTGA--A-TTT--TCAT
gi|113503 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113504 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113505 : tGGTTCATCTCTATACACAGACGAC-GTT---CGTC-TTTGTTT
gi|113506 : tGGTTCATCTCTATAGAGAAATGGC-ATT---TGTC-TTTGTTTCATGA--A-TTT--
gi|113507 : tGATTCATCTCTTTATAGAAATGGC-GTT---TGTC--TTGTTTTATGT--G-TTT--TAATAAAATATT----A-AAAA
gi|113508 : tGGTCCATCTCTTTATAGAGACGAC-ATT----GTC--TTGTTTTGCAT--A-TTT--TCATGAGAT-TT----A-AGAA
gi|113509 : tGGTT-ATCTCTATACAGAGGTGGT-GAT---TGTC-TTT-----GTGA--A-TTT--TTATGAAATATTTTAAA-AGAA
gi|113510 : tGGATCATCTCTATGCATGGACGGC-TTT---CGTC-TTCGT---GTG-----CTT--TCGTTAAATATT----A-AGAA
gi|113511 : tGGTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATA----A-AGAA
gi|113512 : GGTTCATCTCCATGCAGAGACGGC-GTT---TGTC-TTTGTTTTTTGA--A--TT--TCATGAAATATT----A-AGAA
gi|113513 : GATTTATCTTTTTACAGGGACGGC-GTT--------TTTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113514 : GGTTCATCTTTTTAAAGAGACAGA-TTT---CGTC-TTTATTTTGT----A-TTTTGTCATGAGATGTT----A-
gi|113515 : GGTTCATCTCCATTCAGAGATGGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TTAT-AAATATT----A-AGAA
gi|113516 : GGTTCATCTCCATTCTGAGACAGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TCAT-AAATATT----A-AGAA
gi|113517 : GGTTCATCTTTATACAGGAACAGT-GTTGAACATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AGAA
gi|113518 : GATTCATCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113519 : GATTCGTCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113520 : GGTTCATCTTTTTAAAGAGACAGC-GTT---CGTC-ATTGTTTTGTAT--C-TTT--TCATGAGATGTT----A-
gi|113521 : GGTTTGTCTTTATACAGGAACAGT-GTTGATCATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AG
gi|113522 : GGTTCTTCTCTATACAGGGACTGT-GTT---TGTC-ATTGTTTCAGGT--A-TTT--TCATGAAATTTT----A-AGAA
gi|113523 : GGTACATATCCATTTAGATACGTC-ATT---TGTC-TTTGTTTTGTGA--A-TCT--TCATAAAGTATT----A-GAAA
gi|113524 : GGTCAATCTTCTTACAAAGACGGC-GTT---CGTC-ATTGTTCTGTGATTT-TTT--TCATGAAATGTT----A-
gi|113525 : GTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113526 : GTTCGTCT--ATAGAGAGGCGGC-GTT---CGTC-TTTGTTTTGTGA--A-TTT--TCATGAAATATT----A-ATAA
gi|113527 : GTCCATCTTTATACAGAGACGAT-GTT---CATC-TTTATTTCGCAA--A-TTT--TCATAAAATATT----A-AGAA
gi|113528 : GTTCATCTCTATAAGAAGACGGC-GTA---CATC-TTTGTTTCGTGA--A-CTT--TCATAAAATATT----A-AAAA
gi|113529 : GTTCAGCTCCATGCAGAGACAGC-TTT---CGTC-TTTGTTGTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113530 : GTTCATTGCCATACAGAGACGGT-GTT---CATC-TTTGTTTTGTGT--A-CTT--CCATGA
gi|113531 : GTTCATCTTTTTACAGAGACTAC-GTT---CATC-ATTGTTTTGTGG--T-TTT--TCATGAAATGTT----A-
gi|113532 : GTTCATTTTTTTACAGCGACTGT-GTT---CGTC-ATTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113533 : GTTCGTCTCCATACAGAGACGGC-GTT---CGTC-
gi|113534 : TTTATCTTTTTACAGAGACGGC-GTT---C-----TTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113535 : TCATCTGTATACATAGATAGC-GTT---GGTC-TTTGTTTCGCGA--AGTTG--TCATAAA
gi|113536 : CATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113537 : CATATCAATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTTA--A-TTT--TCATGAAATATT----A-AGAA
gi|113538 : TCTCTATACAGAGACGTC-GTT---CGTC-TTT-TATCGTGT--A-TTT--TCATGTAATATT----A-AGAA
gi|113539 : TTTCTGTACAAAGGCGGC-ATT---TGCC-TTTGTTGTGTGA--A-CTT--TCATGAAACA-T----A-AGAA
gi|113540 : TTTTTATACAAA--CGGC-GTT---TGTC-TTTGTTTCAT-A--A-TTT--TCAGGAAATATT----A-AAAA
gi|113541 : CTATGCAGACGCGGC-ATT---TGAT-TTTCTTTCATGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113542 : ATACAAAGTCGAC-GTC---CGTC-TTTGATTCGTGA--A-TTT--TCATGAAATGTT----
gi|113543 : ATACGGGGACGCC-GTT---TGTC-TTTGTTTCGTCA--A-ATT--TCATGAACTATT----A-AGAA
gi|113544 : CGGC-GTT---TGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATACT----
Alignments
lowQualScore : 0 111 0 11 0 00 1111 1
lowQualScore : . ... . .. . .. .... .
lowQualScore : 5 999 5 33 6 88 3333 3
consensus : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
Reference ( family-380 ) : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113472 : GGTTTATCTCTATAAAGAGACGGC-GTT---CGTC-TTTGTTTTGGGA--A-TTT--TCATGAATTATT----A-AGAA
gi|113473 : tGGTTCATCTCCATACAGAGATGGT-GTT---TGTC-TTTGTTTCATGA--A-TTT--TCATGAAATATT----A-AGGA
gi|113474 : tGGTTCATTGCTATACAGAGACGAC-GTT---CGTC-TTTGTTTCGTTA--A-TTT--TCATGTACTATT----A-AGAA
gi|113475 : tTTCATCTCTATATAGAGATGGC-GTT---CGTC-TTTGTTTTGTTA--A-TTT--T-ATGAATAATT----A-AGGA
gi|113476 : tgtGGTTCATCTCTCCACAGAGACGGG-TTT---CGTC-TTTGTTTCGTGT--A-TTT--TCTTGAAATATT----A-AGAA
gi|113477 : tGGTTCATTTCTATACAGCGATGGC-GCT---CGTC--TTGCTTCGTGA--A-T
gi|113478 : tCTATACAGAGACGGC-ATT---CGGC-TTTGTTTTGTGAT-T-TTT--TCGCAACATTTT----A-AAAA
gi|113479 : tggatcgtaaGGTTTATCTCTATACAGAGATGCT-GTT---TGTA-TTTGTTTTATGA--A-TTT--TCGTGAAATATC----A-AGAA
gi|113480 : tGTTCCTCTCTTTACACAGACGAT-GGT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113481 : taGGTTCATCTCTATACAGGAATGGA-ATT---CGTC-TCTGTTTCGTGA--A-
gi|113482 : tGGTTCATTTCTATACAGAGCTGGC-ATT---CATC-TTTCTTT-GTGA--A-TTT--TCAGGAAATATT----A-AGAA
gi|113483 : tGTTCATCTCTCTACATCAACGGC-ATT---CATC-TTTGTTTTATGA--A-TTT--TTATGAAATATT----A-
gi|113484 : taGGTTCATCTCTGTACACAGACCGT-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATTAAAAATT----A-AAAA
gi|113485 : tGATCCATCGCTATAAAGAGACGGG-GTT---CGTC-TTTGTTTCATGA--A-TTT--TCACGAATTATT----G-ATAA
gi|113486 : tGGTTCATCTCTATACAGAGATGGT-GTG---CGCC-GCTGTTTCATGA--A-TTT--TCATGAAATAAT----A-AGAA
gi|113487 : tGGTTCACCTTCATACAGA--CGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATATT----ATAGAA
gi|113488 : tGGTTCATCTCAATACAGTGGTGGT-GTT---CTTC-TTTGTTTTGTGA--A-TTT--TCATTCAATATT----A-AGAA
gi|113489 : tGGTTCACCTCTATACCGAGACAGT-GTT---CGTC-TTTGTATTGTGA--C-TTT--TCATTAAATATT----A-GG
gi|113490 : tGGTTTATTTCTGTGCAGAGATGGC-GTT---CATCTTTTGTTTTGTGA--A-TTT--TCATGAAAAATT----A-
gi|113491 : tATACAGAGACGGC-GTC---CGAC-TTTGTTTCGTGA--A-TTT--TCATGAAGTATT----A-gtaa
gi|113492 : tgattcacacATCTGTATACAGAGACGGC-GTT---CGTT-TGTGTTTTGTGA--A-CTT--TCATGATATATT----A-GAAA
gi|113493 : tggtaaGCTCATCTCTATACAGATACGGC-GTT---TGTC-TTTATGTCTTGT--A-TTT--TCATGAAATATT----A-TGAA
gi|113494 : taGGTTCATCTCTGTACAGAGATGGC-GTT---CATC-TTTGTTTCCTGT--A-CTT--TTATGTAATATT----T-AGAA
gi|113495 : tGATTCATTTCTGGACAGAGACAGC-ATT---CATC-TTTGTTACATGA--A-TTT--TGATGAAATATT----A-AGAA
gi|113496 : tGGTTCATCTCTATACAAAGATAAC-AAT---CATC-TTGGTTTTGTGA--A-TTT--TCACAAAATA-T----A-AGAA
gi|113497 : tGATTCATATCTATACAAGTACGGC-GTT---CGTC-TATGTTTTGTGA--A-TTT--TCAAGAAA-ATT----A-
gi|113498 : tGGTTTGTGTCTATACAGAG--GGTTGTT---CATC-TTT--TTTGTGA--A-TTT--TCATGAAATATT----A-AGAAt
gi|113499 : tGGTTCATCTTCATACAGA--TGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATACT----ATAGAA
gi|113500 : tGGTTCATCTCTATACAGAGATGAT-GTG---CGCT-GCTGTTTCATGA--A-TAT--TCATGAAATAAT----A-AAAA
gi|113501 : tGGTTCATCTCTATACAGCGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-CTT--TCATGAAATGTT----G-ACAA
gi|113502 : tGGTTCATCTACATACAGACTTGGC-ATT---CGTC-TTTGTTTCGTGA--A-TTT--TCAT
gi|113503 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113504 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113505 : tGGTTCATCTCTATACACAGACGAC-GTT---CGTC-TTTGTTT
gi|113506 : tGGTTCATCTCTATAGAGAAATGGC-ATT---TGTC-TTTGTTTCATGA--A-TTT--
gi|113507 : tGATTCATCTCTTTATAGAAATGGC-GTT---TGTC--TTGTTTTATGT--G-TTT--TAATAAAATATT----A-AAAA
gi|113508 : tGGTCCATCTCTTTATAGAGACGAC-ATT----GTC--TTGTTTTGCAT--A-TTT--TCATGAGAT-TT----A-AGAA
gi|113509 : tGGTT-ATCTCTATACAGAGGTGGT-GAT---TGTC-TTT-----GTGA--A-TTT--TTATGAAATATTTTAAA-AGAA
gi|113510 : tGGATCATCTCTATGCATGGACGGC-TTT---CGTC-TTCGT---GTG-----CTT--TCGTTAAATATT----A-AGAA
gi|113511 : tGGTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATA----A-AGAA
gi|113512 : GGTTCATCTCCATGCAGAGACGGC-GTT---TGTC-TTTGTTTTTTGA--A--TT--TCATGAAATATT----A-AGAA
gi|113513 : GATTTATCTTTTTACAGGGACGGC-GTT--------TTTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113514 : GGTTCATCTTTTTAAAGAGACAGA-TTT---CGTC-TTTATTTTGT----A-TTTTGTCATGAGATGTT----A-
gi|113515 : GGTTCATCTCCATTCAGAGATGGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TTAT-AAATATT----A-AGAA
gi|113516 : GGTTCATCTCCATTCTGAGACAGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TCAT-AAATATT----A-AGAA
gi|113517 : GGTTCATCTTTATACAGGAACAGT-GTTGAACATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AGAA
gi|113518 : GATTCATCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113519 : GATTCGTCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113520 : GGTTCATCTTTTTAAAGAGACAGC-GTT---CGTC-ATTGTTTTGTAT--C-TTT--TCATGAGATGTT----A-
gi|113521 : GGTTTGTCTTTATACAGGAACAGT-GTTGATCATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AG
gi|113522 : GGTTCTTCTCTATACAGGGACTGT-GTT---TGTC-ATTGTTTCAGGT--A-TTT--TCATGAAATTTT----A-AGAA
gi|113523 : GGTACATATCCATTTAGATACGTC-ATT---TGTC-TTTGTTTTGTGA--A-TCT--TCATAAAGTATT----A-GAAA
gi|113524 : GGTCAATCTTCTTACAAAGACGGC-GTT---CGTC-ATTGTTCTGTGATTT-TTT--TCATGAAATGTT----A-
gi|113525 : GTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113526 : GTTCGTCT--ATAGAGAGGCGGC-GTT---CGTC-TTTGTTTTGTGA--A-TTT--TCATGAAATATT----A-ATAA
gi|113527 : GTCCATCTTTATACAGAGACGAT-GTT---CATC-TTTATTTCGCAA--A-TTT--TCATAAAATATT----A-AGAA
gi|113528 : GTTCATCTCTATAAGAAGACGGC-GTA---CATC-TTTGTTTCGTGA--A-CTT--TCATAAAATATT----A-AAAA
gi|113529 : GTTCAGCTCCATGCAGAGACAGC-TTT---CGTC-TTTGTTGTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113530 : GTTCATTGCCATACAGAGACGGT-GTT---CATC-TTTGTTTTGTGT--A-CTT--CCATGA
gi|113531 : GTTCATCTTTTTACAGAGACTAC-GTT---CATC-ATTGTTTTGTGG--T-TTT--TCATGAAATGTT----A-
gi|113532 : GTTCATTTTTTTACAGCGACTGT-GTT---CGTC-ATTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113533 : GTTCGTCTCCATACAGAGACGGC-GTT---CGTC-
gi|113534 : TTTATCTTTTTACAGAGACGGC-GTT---C-----TTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113535 : TCATCTGTATACATAGATAGC-GTT---GGTC-TTTGTTTCGCGA--AGTTG--TCATAAA
gi|113536 : CATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113537 : CATATCAATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTTA--A-TTT--TCATGAAATATT----A-AGAA
gi|113538 : TCTCTATACAGAGACGTC-GTT---CGTC-TTT-TATCGTGT--A-TTT--TCATGTAATATT----A-AGAA
gi|113539 : TTTCTGTACAAAGGCGGC-ATT---TGCC-TTTGTTGTGTGA--A-CTT--TCATGAAACA-T----A-AGAA
gi|113540 : TTTTTATACAAA--CGGC-GTT---TGTC-TTTGTTTCAT-A--A-TTT--TCAGGAAATATT----A-AAAA
gi|113541 : CTATGCAGACGCGGC-ATT---TGAT-TTTCTTTCATGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113542 : ATACAAAGTCGAC-GTC---CGTC-TTTGATTCGTGA--A-TTT--TCATGAAATGTT----
gi|113543 : ATACGGGGACGCC-GTT---TGTC-TTTGTTTCGTCA--A-ATT--TCATGAACTATT----A-AGAA
gi|113544 : CGGC-GTT---TGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATACT----
blockSeqs : GAA TT TTAA T
blockSeqs : GAT T . T
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
finalCons : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
Alignments
lowQualScore : 0 111 0 11 0 00 1111 1
lowQualScore : . ... . .. . .. .... .
lowQualScore : 5 999 5 33 6 88 3333 3
consensus : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
Reference ( family-380 ) : GGTTCATCTCTATACAGAGACGGC-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113472 : GGTTTATCTCTATAAAGAGACGGC-GTT---CGTC-TTTGTTTTGGGA--A-TTT--TCATGAATTATT----A-AGAA
gi|113473 : tGGTTCATCTCCATACAGAGATGGT-GTT---TGTC-TTTGTTTCATGA--A-TTT--TCATGAAATATT----A-AGGA
gi|113474 : tGGTTCATTGCTATACAGAGACGAC-GTT---CGTC-TTTGTTTCGTTA--A-TTT--TCATGTACTATT----A-AGAA
gi|113475 : tTTCATCTCTATATAGAGATGGC-GTT---CGTC-TTTGTTTTGTTA--A-TTT--T-ATGAATAATT----A-AGGA
gi|113476 : tgtGGTTCATCTCTCCACAGAGACGGG-TTT---CGTC-TTTGTTTCGTGT--A-TTT--TCTTGAAATATT----A-AGAA
gi|113477 : tGGTTCATTTCTATACAGCGATGGC-GCT---CGTC--TTGCTTCGTGA--A-T
gi|113478 : tCTATACAGAGACGGC-ATT---CGGC-TTTGTTTTGTGAT-T-TTT--TCGCAACATTTT----A-AAAA
gi|113479 : tggatcgtaaGGTTTATCTCTATACAGAGATGCT-GTT---TGTA-TTTGTTTTATGA--A-TTT--TCGTGAAATATC----A-AGAA
gi|113480 : tGTTCCTCTCTTTACACAGACGAT-GGT---CGTC-TTTGTTTCGTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113481 : taGGTTCATCTCTATACAGGAATGGA-ATT---CGTC-TCTGTTTCGTGA--A-
gi|113482 : tGGTTCATTTCTATACAGAGCTGGC-ATT---CATC-TTTCTTT-GTGA--A-TTT--TCAGGAAATATT----A-AGAA
gi|113483 : tGTTCATCTCTCTACATCAACGGC-ATT---CATC-TTTGTTTTATGA--A-TTT--TTATGAAATATT----A-
gi|113484 : taGGTTCATCTCTGTACACAGACCGT-GTT---CGTC-TTTGTTTCGTGA--A-TTT--TCATTAAAAATT----A-AAAA
gi|113485 : tGATCCATCGCTATAAAGAGACGGG-GTT---CGTC-TTTGTTTCATGA--A-TTT--TCACGAATTATT----G-ATAA
gi|113486 : tGGTTCATCTCTATACAGAGATGGT-GTG---CGCC-GCTGTTTCATGA--A-TTT--TCATGAAATAAT----A-AGAA
gi|113487 : tGGTTCACCTTCATACAGA--CGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATATT----ATAGAA
gi|113488 : tGGTTCATCTCAATACAGTGGTGGT-GTT---CTTC-TTTGTTTTGTGA--A-TTT--TCATTCAATATT----A-AGAA
gi|113489 : tGGTTCACCTCTATACCGAGACAGT-GTT---CGTC-TTTGTATTGTGA--C-TTT--TCATTAAATATT----A-GG
gi|113490 : tGGTTTATTTCTGTGCAGAGATGGC-GTT---CATCTTTTGTTTTGTGA--A-TTT--TCATGAAAAATT----A-
gi|113491 : tATACAGAGACGGC-GTC---CGAC-TTTGTTTCGTGA--A-TTT--TCATGAAGTATT----A-gtaa
gi|113492 : tgattcacacATCTGTATACAGAGACGGC-GTT---CGTT-TGTGTTTTGTGA--A-CTT--TCATGATATATT----A-GAAA
gi|113493 : tggtaaGCTCATCTCTATACAGATACGGC-GTT---TGTC-TTTATGTCTTGT--A-TTT--TCATGAAATATT----A-TGAA
gi|113494 : taGGTTCATCTCTGTACAGAGATGGC-GTT---CATC-TTTGTTTCCTGT--A-CTT--TTATGTAATATT----T-AGAA
gi|113495 : tGATTCATTTCTGGACAGAGACAGC-ATT---CATC-TTTGTTACATGA--A-TTT--TGATGAAATATT----A-AGAA
gi|113496 : tGGTTCATCTCTATACAAAGATAAC-AAT---CATC-TTGGTTTTGTGA--A-TTT--TCACAAAATA-T----A-AGAA
gi|113497 : tGATTCATATCTATACAAGTACGGC-GTT---CGTC-TATGTTTTGTGA--A-TTT--TCAAGAAA-ATT----A-
gi|113498 : tGGTTTGTGTCTATACAGAG--GGTTGTT---CATC-TTT--TTTGTGA--A-TTT--TCATGAAATATT----A-AGAAt
gi|113499 : tGGTTCATCTTCATACAGA--TGGC-GTT---CATC-TTTGTTTTGTGT--A-TTT--TCATGCGATACT----ATAGAA
gi|113500 : tGGTTCATCTCTATACAGAGATGAT-GTG---CGCT-GCTGTTTCATGA--A-TAT--TCATGAAATAAT----A-AAAA
gi|113501 : tGGTTCATCTCTATACAGCGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-CTT--TCATGAAATGTT----G-ACAA
gi|113502 : tGGTTCATCTACATACAGACTTGGC-ATT---CGTC-TTTGTTTCGTGA--A-TTT--TCAT
gi|113503 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113504 : tGGTTCCTCTCTATACAGTGGTGGC-ATT---TGTC-TTTGTGGCGTGA--A-TTT--TCATGAAATGTT----G-ACAA
gi|113505 : tGGTTCATCTCTATACACAGACGAC-GTT---CGTC-TTTGTTT
gi|113506 : tGGTTCATCTCTATAGAGAAATGGC-ATT---TGTC-TTTGTTTCATGA--A-TTT--
gi|113507 : tGATTCATCTCTTTATAGAAATGGC-GTT---TGTC--TTGTTTTATGT--G-TTT--TAATAAAATATT----A-AAAA
gi|113508 : tGGTCCATCTCTTTATAGAGACGAC-ATT----GTC--TTGTTTTGCAT--A-TTT--TCATGAGAT-TT----A-AGAA
gi|113509 : tGGTT-ATCTCTATACAGAGGTGGT-GAT---TGTC-TTT-----GTGA--A-TTT--TTATGAAATATTTTAAA-AGAA
gi|113510 : tGGATCATCTCTATGCATGGACGGC-TTT---CGTC-TTCGT---GTG-----CTT--TCGTTAAATATT----A-AGAA
gi|113511 : tGGTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATA----A-AGAA
gi|113512 : GGTTCATCTCCATGCAGAGACGGC-GTT---TGTC-TTTGTTTTTTGA--A--TT--TCATGAAATATT----A-AGAA
gi|113513 : GATTTATCTTTTTACAGGGACGGC-GTT--------TTTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113514 : GGTTCATCTTTTTAAAGAGACAGA-TTT---CGTC-TTTATTTTGT----A-TTTTGTCATGAGATGTT----A-
gi|113515 : GGTTCATCTCCATTCAGAGATGGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TTAT-AAATATT----A-AGAA
gi|113516 : GGTTCATCTCCATTCTGAGACAGC-ATT---TGTC-TTTGTTTTGTGA--A-TTT--TCAT-AAATATT----A-AGAA
gi|113517 : GGTTCATCTTTATACAGGAACAGT-GTTGAACATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AGAA
gi|113518 : GATTCATCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113519 : GATTCGTCTCTATACAAGGGCAGC-GTT---CGTC-TTTATTTCGTGA--A-TTT--AAATGCAATATT----A-AGAA
gi|113520 : GGTTCATCTTTTTAAAGAGACAGC-GTT---CGTC-ATTGTTTTGTAT--C-TTT--TCATGAGATGTT----A-
gi|113521 : GGTTTGTCTTTATACAGGAACAGT-GTTGATCATC-TTT-TTTTGTGA--A-TTT--TCATGAAATATT----G-AG
gi|113522 : GGTTCTTCTCTATACAGGGACTGT-GTT---TGTC-ATTGTTTCAGGT--A-TTT--TCATGAAATTTT----A-AGAA
gi|113523 : GGTACATATCCATTTAGATACGTC-ATT---TGTC-TTTGTTTTGTGA--A-TCT--TCATAAAGTATT----A-GAAA
gi|113524 : GGTCAATCTTCTTACAAAGACGGC-GTT---CGTC-ATTGTTCTGTGATTT-TTT--TCATGAAATGTT----A-
gi|113525 : GTTCATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113526 : GTTCGTCT--ATAGAGAGGCGGC-GTT---CGTC-TTTGTTTTGTGA--A-TTT--TCATGAAATATT----A-ATAA
gi|113527 : GTCCATCTTTATACAGAGACGAT-GTT---CATC-TTTATTTCGCAA--A-TTT--TCATAAAATATT----A-AGAA
gi|113528 : GTTCATCTCTATAAGAAGACGGC-GTA---CATC-TTTGTTTCGTGA--A-CTT--TCATAAAATATT----A-AAAA
gi|113529 : GTTCAGCTCCATGCAGAGACAGC-TTT---CGTC-TTTGTTGTGTGA--A--TT--TCATGAAATATT----A-TGAA
gi|113530 : GTTCATTGCCATACAGAGACGGT-GTT---CATC-TTTGTTTTGTGT--A-CTT--CCATGA
gi|113531 : GTTCATCTTTTTACAGAGACTAC-GTT---CATC-ATTGTTTTGTGG--T-TTT--TCATGAAATGTT----A-
gi|113532 : GTTCATTTTTTTACAGCGACTGT-GTT---CGTC-ATTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113533 : GTTCGTCTCCATACAGAGACGGC-GTT---CGTC-
gi|113534 : TTTATCTTTTTACAGAGACGGC-GTT---C-----TTGTTTTGTGA--T-TTT--TCATGAAATGTT----A-
gi|113535 : TCATCTGTATACATAGATAGC-GTT---GGTC-TTTGTTTCGCGA--AGTTG--TCATAAA
gi|113536 : CATCTCCATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113537 : CATATCAATGCAGAGACGGC-GTT---CGTC-TTTGTTTTTTTA--A-TTT--TCATGAAATATT----A-AGAA
gi|113538 : TCTCTATACAGAGACGTC-GTT---CGTC-TTT-TATCGTGT--A-TTT--TCATGTAATATT----A-AGAA
gi|113539 : TTTCTGTACAAAGGCGGC-ATT---TGCC-TTTGTTGTGTGA--A-CTT--TCATGAAACA-T----A-AGAA
gi|113540 : TTTTTATACAAA--CGGC-GTT---TGTC-TTTGTTTCAT-A--A-TTT--TCAGGAAATATT----A-AAAA
gi|113541 : CTATGCAGACGCGGC-ATT---TGAT-TTTCTTTCATGA--A-TTT--TCATGAAATATT----A-AGAA
gi|113542 : ATACAAAGTCGAC-GTC---CGTC-TTTGATTCGTGA--A-TTT--TCATGAAATGTT----
gi|113543 : ATACGGGGACGCC-GTT---TGTC-TTTGTTTCGTCA--A-ATT--TCATGAACTATT----A-AGAA
gi|113544 : CGGC-GTT---TGTC-TTTGTTTTTTGA--A-TTT--TCATGAAATACT----