lowQualScore : 1 77777777777777777777777777777777777777 111 2 4444444444444444444444444444444444444 11 111 111111111 1 111 222222222222222 11111111111 11111 111111 11111111111 11111111
lowQualScore : 5 5 3 99999999999999999999999999999999999999 333 6 2222 9 0 000 3 000 1111 2 6666666666666666666666666666666666666 00 55555 22222 1111 11 9 00 00 333 666666666 0 22 1 6666 000 777777777 3 0 22 666666666666666 00000000000 222 00000 4 111111 77 66666666666 33 9 1 4 77 66666666666666 5 00000000 1 0 1 1 777 2 4
lowQualScore : . . . ...................................... ... . .... . . ... . ... .... . ..................................... .. ..... ..... .... .. . .. .. ... ......... . .. . .... ... ......... . . .. ............... ........... ... ..... . ...... .. ........... .. . . . .. .............. . ........ . . . . ... . .
lowQualScore : 7 7 3 99999999999999999999999999999999999999 777 1 3333 9 5 999 6 999 6666 6 1111111111111111111111111111111111111 77 66666 55555 7777 66 7 77 77 222 111111111 5 99 6 9999 999 000000000 8 8 11 111111111111111 55555555555 888 00000 8 888888 99 55555555555 33 6 1 7 55 99999999999999 8 77777777 2 2 3 3 222 1 0
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCC----------A----------------T----------CACCTGAG-TAAAGGATT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-CC--CAG-GGG-C-CCAGA-C-T-N--A--N-----CA--A-----A-----T--C-TT-NTAGGG--G--ACCN-CCA-------TGCA-AT-GCTACATGTAAAATAT-CT-AA-GGTCT--------ANGCATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-N----AAA--G----T------TA--ACCC-CTGTGGNAGCCCCN-AATT--------------TGACCCCAGGG------ACCC-GGCTTGAAC-A-A---TTTTGATAAAGGACTATCAACCAATTGACATA
Reference ( gi|103779 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC----------A----------------T----------CACCTGAT-CAAAGGATT----GACCCCTGTGGAAG-CC---CCTAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-C-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--ACTA-CCA-------GACA-AT-ACTAGATGTAAAATAT-TC-AA-ACTCC--------ATACATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-T----AAA--G----T------TA--AACT-CTGTGGAAGCCCTT-AATT--------------TCACCCCAGCA------ACCC-AGTTTGAAC-A-A---TTTTGATAAAGAACTATCAACCAGTTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC----------A----------------T----------CACCTGAT-CAAAGGATT----GACCCCTGTGGAAG-CC---CCTAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-C-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--ACTA-CCA-------GACA-AT-ACTAGATGTAAAATAT-TC-AA-ACTCC--------ATACATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-T----AAA--G----T------TA--AACT-CTGTGGAAGCCCTT-A---------------------------A------ACCC-AGTTTGAAC-A-A---TTTTGATAAAGAACTATCAACCAGTTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCC----------A----------------TGTAAGTTGATCACCTGAG-TAAAGGATT----GACCCCTGTGGGAG-CC---A-TAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-C-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GACA-AT-ACTAAATGTAAAATAT-TA-AA-ACTCC--------ATACATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-TATT--------------TCACCTCAGCA------ACCC-AGTTTGAAC-A-A---TTTTGATAAAGAACTATCAACCAATTGACATA
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCC----------A----------------TGTAAGTTTATCACCTGAG-TAAAGGATT----GACCTCTGTGGAGG-CC---C-TAAA---TTTT----A-C-AA--AAG-GGG-T-CCAGA-T-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GACA-AT-ACTAGATGTAAAATAT-TC-AA-ACTCC--------ATGCATT--G---------------TGCT-----------T--AT-----AAACACTTTG-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-AATT--------------CCACCCCAGCA------ACCC-GGTTTGAAC-A-A---TCTTGATAAAGGACTATCAACCAATTGATAcaacat
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCT----------A----------------TGTAAGTCGATCACCTTAG-TAAAGGATC----GACCCCTGTGGAAG-CC---C-TAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-T-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GAAA-AT-ACTAGATGTAAAATAT-TC-AA-ACTAC--------ATACATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-AATT--------------TCACCTCAGTA------ACCC-GGTTAGAAA-A-A---TCTTGATAAAGGACTATCAACCAATTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCA----------A----------------TGTAAGTTGATCACCTAAG-TAAAGGATT----GATCCCCGTGGAAG-CC---C-TAAA---TTTG----A-C-AA--AAA-GGGCT-CCAGA-T-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GACA-AT-ACTAGATGTAAAATAT-TC-AA-ACTCC--------ATACATT--G---------------TGCT-----------T--AG-----TAACATTTTG-T-A----AAA--G----T------TA--ACCT-CTGTGTGAGCCCTT-AATT--------------TCACCCCAGCA------ACCA-GGTTTGAAC-A-A---TCTTGATAAAGATTAATCAACCAATTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCC----------A----------------TGTAAGTCGATCACCTGAG-TAAAGGATT----GACCCCTCTG-AAG-GC---CCTAAA---------------------------------------------T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GAAA-AT-ACTAGATGTAAAATAT-TC-AA-ACAAC--------ATACATT--G---------------TGCT-----------T--GT-----TAACACTTTG-T-A----AAA--G----T------TA--ATCT-CTGTGGAAGCCCTT-AATT--------------TCACCCCAGTA------ACCC-GGTTTGAAC-A-A---TCTTGATAAAGGACTATCAACCAATTGACATAcaacat
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAGCCGA----------------T----------TACCTGAG-TAAAGGATT----GACTCCTGTGGAGG--C---CCTAAA---TTTG----A-C-AA--AAG-TGG-T-CTAGA-T-T-G--A--T-----CT--A-----A-----T--T-TT-ATACA----------------------------------------AATAT-TC-AA-ACGCC--------ATACATT--G---------------TGCT-----------T--AT-----TAACACTTTG-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-AATT--------------Tcaacat
gi|103785 : AAACAAGGGGCCC----------AAGTAGGCCTAAGACACT----------CATCTGAG-TAACAGATT----GACATCT-----AA-CCAGGCTTGAA---TTTT----A-C-CC--AAT-GGG---CCAGA-CAT-G--AAGT------A--A-----C-----T--T-GC-A-ACAG--A--GCAA-CCA-------GGTA-AT-ACCTGCTTCA---TAC-TCTAA-ACTTTTTGAGAAGATTTATTTTA---------------TGTTC----------T--ATCATTATAACACTATG-T-T-----AA--G----TG-----TG--ACCT-CTGTTGCAACTCCT-TATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCT-GGCTTGAAC-T-A---TCCTGGGAGAGGACCACCAGCCAA
gi|103849 : gatacatcttaa----------A----------------T----------CACCTGAG-TAAAGGATT----GACCTCTGTGGAGG-CC---C-TAAA---TTTT----A-C-AA--AAG-GGG-T-CCAGA-T-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------GACA-AT-
gi|103788 : tt----------A----------------T----------CACTCTATGTAAAACAGT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-CC--CAG-GGG-C-CCGTC-T-T-C--A--A-----CA--A-----A-----T--C-TT--TAGTG--G--ACCC-CCA-------CGCA-AG-ATTCAATGAAAAAT
gi|103786 : ----------------T----------CGTCTGAG-TAAAAGAAT----GACCCCTGTGGATG-TT---CC-GCA---TTTGAGCCA-C-AA--CA------C-CCAG--C---------T-----CA--A-----A-----C--T-TA-GTACAA--G--GCCA-C-----------CA-AT-AATAGATGTAAAACAT-TT-AATA--CC--------GTGCATT--G---------------TTCT-----------T--TT-----TGATA
gi|103787 : gaaacaaatgggcctaagacac----------------T----------TACCTGAG-GAAAATATT----GACTCCTGT-----------CCCAAA---TTTG----A-C-CA--GA--GCG-T-CTCGA-CTT-G--A--A-----CA--A-----T-----C--T-TG-CTACAG--A--GTCA-TCA-------CACA-AT-AGTAAATGTAAAA
gi|103852 : cgc----------CACCTGAT-CAAAGGATT----GACCCCTGTGGAAG-CC---CCTAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-C-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--ACTA-CCA-------GACA-AT-
gi|103851 : ----------CACCTGAT-CAAAGGATT----GACCCCTGTGGAAG-CC---CCTAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-C-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--ACTA-CCA-------GACA-AT-
gi|103850 : ----------CACCTTAG-TAAAGGATC----GACCCCTGTGGAAG-CC---C-TAAA---TTTG----A-C-AA--AAG-GAG-T-CCAGA-T-T-G--A--T-----CA--A-----A-----T--T-TT-ATACAG--G--GCTA-CCA-------
gi|103811 : -CAAAACAGT----GACCCCTGTTGC-G-AC---CCTCAA---TTTG----A-C-CC--CAG-GGA-C-CC-GA-C-T-TC-A--A-----CA--A-----A-----T--T-TT--TAGGG--G--ACCT-CCA-------TGCA-AT-GCTACATGTAAAATAT-CT-AA-
gi|103829 : gAAAG--TT----AAACTCTGTGGAAG-CC---CTT-AA---TTTC----A-C-CC--CAG-CAA-C-CCAGT-T-T-G--A--A-----CA--A-----T-----T--T-TG-ATAAAG--A--ACTA-TCAACCAGTTGACATATCACT---TGCAGAAGAT-TT-AA-A
gi|103797 : tAAAG--TT----AACCTCTGTGGAAG-CC---CTT-TA---TTTC----A-C-CT--CAG-CAA-C-CCAGT-T-T-G--A--A-----CA--A-----T-----T--T-TG-ATAAAG--A--ACTA-TCA-------ACCA-AT-aaagctatatttatctatagcattctcatatactataaaagt
gi|103799 : gtaAAAG--TT----AACCTCTGTGGAAG-CC---CTT-AA---TTCC----A-C-CC--CAG-CAA-C-CCGGT-T-T-G--A--A-----CA--A-----T-----C--T-TG-ATAAAG--G--ACTA-TCA-------ACCA-AT-
gi|103800 : gtaAAAG--TT----AATCTCTGTGGAAG-CC---CTT-AA---TTTC----A-C-CC--CAG-TAA-C-CCGGT-T-T-G--A--A-----CA--A-----T-----C--T-TG-ATAAAG--G--ACTA-TCA-------ACCA-AT-
gi|103798 : gtaAAAG--TT----AACCTCTGTGGAAG-CC---CTT-AA---TTTC----A-C-CT--CAG-TAA-C-CCGGT-T-A-G--A--------AA--A-----A-----T--C-TTGATAAAG--G--ACTA-TCA-------ACCA-AT-
gi|103801 : gtaAAACGAT-----GACCCCTGTGGCAG-CC---CC-AAA---CTTG----A-C-CT--AAG-GGA-C-CCA-A-CAT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACCT-CCA-------TGCA-AT-GCTACATGTAAAATAT-CT-AA-GGTCT--------AGGCCTT--GAATTTGCAGAGAAAATGTT-----------T--TT-----TAAAATTTTGCT-T----AAAT-GTGC-T------TATTAACC-CTGTGGTAG
gi|103795 : gtaAAAAAAGT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-CT--CAG-GGA-C-CCAAC-T-T-C--A--A-----CA--A-----A-----T--C-TT--TA-AG--A--AATATCCA-------TGCA-AT-GCTACATGTAAAATAT-
gi|103853 : taagtAAAG---T----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-CT--CAG-GGA-C-CCAAC-T-T-C--A--A-----CA--A-----A-----T--C-TT--TA-AG--A--AATATCCA-------TGCA-AT-GCTACATGTAAAAT
gi|103813 : aAAAACATT----GACCCCTGTGGTGG-CC---TC-AAA---TTTG----ACC-CA--AAG-GA--C-CCAAC-T-T-C--A--A-----CA--A-----A-----C--C-TT-TTAGTG--G--ACCC-CAA-------TGCA-AT-GCTACACATAAAATATCTC-AA-
gi|103806 : gtAAAAGAGT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----GCC-CC--GGG-GAG-C-C--GA-C-T-------T-----CA--A-----AAAATCT--T-TT-A-AGAG--A--ACAT-CCA-------TGCA-AT-GCTACATGTTAAATAT-CT-AA-GATCT--------A
gi|103835 : gtAAAG---T----GACCCCTTTGGCGG-CC---CC-AAA---TTTG----A-C-CC--CAG-G--------GA-C-TCG--A--TGTCAACA--A-----A-----T--C-TG-TTAGAG--G--ACCC-CTA-------TGCA-AT-GCAATATGTAAAATAT-TT-AA-GGTCT--------A
gi|103845 : AAAAGATTATTAGACCC-TGTGGTGG-CC---CCGAAG---TT-G----A---AATCATG-GA--C-CCAGT-T-T-G--A--C-----CA--A-----A-----C--A-TG-GTAGAA--G--GCCA-TTA-------GACA-AT-
gi|103796 : ttgaacaaacttgatagagaccatcagccaatgctacatataaaatatctcaaagtctagttttacagtttgggagaAAAAGATTATTAGACCC-TGTGGTGG-CC---CCGAAG---TT-G----A---AATCATG-GA--C-CCAGT-T-T-G--A--C-----CA--A-----A-----C--A-TG-GTAGAA--G--GCCA-TTA-------GACA-AT-GAAATATTTAAAAAAT-CT-AA-GCTCC--------TGACATT--G---------------AACT-----------TTCAG-----AAACATTTTgaaata
gi|103823 : gagaACT----GACCCCTGTGGC-G-TC---ACCAAA---TTTG----A-T-GC--CAG-GAA---CCTGA-C-T-TC-A--A-----CA--A-----A-----T--A-TT-TTAGGG--G--ACCT-TCA-------TGCA-AT-GCTACATGTAAAATAT-CT-AA-GGTCT--------AGACCTT--taa
gi|103831 : gtgaaacTT----AACCTGTGTGGCAG-CC---CA-AAA---TTTA----A-C-CC--CAG-GGA-C-CC-GA-T-T-------T-----CA--ACAACTA-----T--T-TT-A--CAG--G--ACCT-CCA-------TGCA-AT-A-TACATGTAAGATAT-CT-AA-GGTCT--------ACGCCTT--G---------------AACT-----------T--
gi|103848 : taaaacgTT----AACCTGTGTGGCAG-CC---CA-AAA---TTTA----A-C-CC--CAG-GGA-C-CC-GA-T-T-------T-----CA--ACAACTA-----T--T-TT-A--CAG--G--ACCT-CCA-------TGCA-AT-A-TACATGTAAGAT
gi|103802 : cattttccctatataactatataaaacgT----GACCCCTGTGGTGG-CC---CC-AAA---TTTG----AAC-CT--AGG-GA--T-CC-GA-C-T-TC-A--A-----CA--A-----A-----T--C-TT-TTACAG--G--ACCT-CCA-------TGCA-AT-GCTAAATGTAAAATAT-CT-AA-GGTCT--------A
gi|103803 : gtaaaaT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----T-C-CA--CAG-AAA-C-CCA-A-C-T-------T-----CA--ACA---A-----T--A-TT-TTACAG--G--ACCT-CCA-------TGCA-AT-GTTACATGTAAAATAT-CT-AA-
gi|103807 : gtaaaacagT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-CT--CAG-GGA-T-CC-GA-C-T-AC-A--C-----AA--A-----A-----T--C-TT--TAAAG--GGAAC-A-CCC-------TGCA-AT-GCTACATGTAAAATAT-CT-AA-
gi|103794 : gtaaaacagT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-AC--AAG-G-G-A-CCTGA-CTT-T--A--A-----CA--A-----A-----T--C-TT-TTAGGA--G--ACCT-CCA-------GGCA-AT-GCTACAAGCAAAAAAT-
gi|103784 : ctgtgtaaaacagT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----A-CTAC--AAG-GA----CCCGA-C-T-------T-----CA--ACA---A-----TCCT-TT--TAGGG--G--ATCT-CCA-------TGCA-AT-GTTACATGTAAAATAT-CT-AA-GGTC----------TACAT
gi|103804 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatggaggcccctaaataactctatgtaaaaccaT----GGCCCCTGTGGTGG-CC---CC-AAA---TTTG----ATC-CC--AGG-GA----CCCGC-C-T-TC-A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACCT-CCA-------TACA-AT-GCTATATGTAAAATAT-CT-AA-GATCT--------AGGTCTT--G---------------AGCT-----------T--cttaaacttccggagaacatgtttgaaacgttaa
gi|103838 : gtaaaacagT----GACTCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-A-------------CCAG----C-G--A--C-----CC--G-----A-----C--T-TT--TAGGG--G--ACCT-CCA-------TGCC-AT-GCTACATGTAAAATAT-CT-AA-AGTCT--------AAGCATT--G---------------
gi|103808 : T----GACCCCTGTGGTGG-CC---CC-AAA---TTTG----A-C-CC--CAG-GGA-C-CC-GA-CTT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGA--G--ACCG-CCA-------TGCA-AT-GCTACATGTAATATAT-CT-AA-GATCT--------A
gi|103822 : gtaaaacagT----GACCCCTGTGGTGA-CC---CCCAAA---TTTG----A-C-CT--CAG-G-G-A-CCTCA-C-T-T--A--CA----CA--A-----A-----T--C-TT-TTAGGG--G--ACCT-CCA-------CGCA-AT-GCTACATATAAAATAT-
gi|103830 : gtaaaacagT----GACCCCTGTGGTGG-CC---CC-AAA---TTTG----A-C-CC--CAG-GGA-C-CCAAC-T-T-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACCT-CAA-------TGCA-AT-GCTACATGTAAAATA
gi|103840 : taaacggT----GACCCATGTGGCAG-CC---CC-AAA---TTTG----A-C-CC--CAG-GGA-C-CCCGA-C-T-------TCCA--CA--A-----A-----T--C-TT-TTAGGG--G--ACCT-CCA-------TGCA-AT-GATACATGTAGAACAT-TT-AA-GGTCT--------AGGCCTT--G---------------AACT-----------T--
gi|103810 : T----GACCC-TATGGCGG-CC---CC-AAA---TTTG----A-C-TC--CAG-G-G-A-CCTGA-CTT-C--A--A-----CA--A-----A-----T--T-TT--TATGG--G--ACCT-CCA-------TGCA-AT-GCTACATGTTAAATAT-CT-AA-GGTCT--------AGGCCTT--G---------------AACTTTCAGAGAAAAT--GT-----TAAAGTTTTG-T-TTAA-AAA--GTGC-T------TAT-AACTCCTGTGG
gi|103837 : gtaaaacagT----GACCCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-TC--CAG-GGA-C-CCA-A-T-T-------T-----CAACA-----A-----T--C-TT-TTAGGG--A--ATCT-CCA-------TGCA-AT-ACTACATG-AAAATAT-CT-AA-GGTCT--------ACACCTT--G---------------AACT-----------T--
gi|103805 : T----GACCCCTGTGGCGG-CC---C-TAAA---TTTG----G-C-CC--CAG-GGA-C-CCGAT-T-T-C--A--A-----CA--A-----A-----T--C-TT-TTACAG--G--ACCC-CCA-------TGCA-AT-GCTACATGTTAAGT
gi|103841 : gtaaaacggT----GACCCCTGTGGCAG-CC---TC-AAA---TTTG----A-C-TT--CA--------CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT-TTAGGG--A--ACAT-CCA-------TTCA-AT-GCTACATGTAAAATAT-
gi|103789 : T----GACCCCTGTGGCAG-CC---TC-AAA---TTTG----A-C-TT--CA--------CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT-TTAGGG--A--ACAT-CCA-------TTCA-AT-GCTACATGTAAAATAT-
gi|103825 : cctatgtaaaacagT----GACACCTGTGGCAA-CC---CC-AAA---TTTT----A-C-CC--CAG-G-G-A-CCTGA-C-C-------T-----CA--ACAC--A-----T--T-TT-TCAGAG--G--ATCT-CCA-------TGCA-AT-GCTAAATGTAAAATAT-CT-AA-GTTCT--------A
gi|103817 : gtgaaacaaT----GACCCATGTGGCGG-CC---C-TAAA---TTTG----A-C-TC--TAG-G-G-T-CTCGA-C-T----A--TAA---CA--A-----A-----C--C-TA-TTAGGG--G--ACCT-CCA-------TGCA-AT-ACTACAGGTAAAATAT-CT-AA-
gi|103820 : gtaaaacaaT----GATCCCTGTGGCAG-CC---CC-AAA---TTTG----T-C-CC--AAG-G-G-A-CCTGA-CTT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--AACC-CCA-------TTCA-AT-GCTACATGGAAAATAT-CT-AA-
gi|103819 : gtaaaacagT----GATCCCTGTGGCAG-CC---CC-AAA---TTTG----T-C-CC--AAG-G-G-A-CCTGA-CTT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--AACC-CCA-------TTCA-AT-GCTACATGGAAAATAT-CT-AA-
gi|103821 : gtaaaacagT----GATCCCTGTGGCAG-CC---CC-AAA---TTTG----T-C-CC--AAG-G-G-A-CCTGA-CTT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACCC-CCA-------TTCA-TT-GCTACATGGAAAATAT-CT-AA-
gi|103815 : gtaaaacagT----GGCCCCTGCGGCAG-CC---CC-AAA---TTTT----A-C-CC--CAG-TGA-C-CCA-A-C-T-T--C--A-----CA--A-----ACC---T--T-TT--TAGGG--G--ACCC-CCA-------TACA-AT-GCTACATGTAAAATAT-
gi|103839 : gtaaaacagT----GATCCCTGTGGCGG-CC---CA-AAA---TTTG----A-C-CC--CAGTGA----CCTGACC-T-C--A--A-----CA--A-----A-----T--C-TT-TTAGAG--G--ACCT-CCA-------TGCA-AT-GCTACATTTAAAATAT-
gi|103791 : T----GACCCCTGTGGCAG-CC---TC-AAA---TTTG----A-C-TC--CA--------CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT-TTAGGG--A--ACAT-CCA-------TTCA-AT-GCTTCATGTAAAATAT-
gi|103792 : cctatgtaaaacagT----GACCCCTGTGGCAG-TC---TC-AAA---TTTG----A-C-TC--CA--------CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT-TTAGGG--A--ACAT-CCA-------TTCA-AT-GCTGCATGTAAAATAT-
gi|103793 : cctatgtaaaacagT----GACCCCTGTGGCAG-CC---TC-GAA---TTTG----A-C-TC--CA--------CCAGA-CTT-T--A--A-----CA--A-----A-----T--C-TT-TTA-AG--G--AACATCCA-------TTCA-AT-GCTACATGTAAGATAT-
gi|103836 : cctatgtaaaacagT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-------------C-CCAGG-----G--A--C-----CC--G-----A-----C--T-TC-A-ACAG--G--ACCT-CTA-------TGCA-AT-GCTATATGC-ACATAT-CT-AA-GGTCT--------AGACCTT--
gi|103833 : T----GTCCGCTGTGGCAG-CC---TC-AAA---TTTG----A-C-TC--CA--------CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT--TTCAG--G--AACATCCA-------TTCA-AT-GCTACATGTAAAATAT-
gi|103828 : taaaacagT----GACCCCTGTGACAG-CC---TC-AAA---TTTG----A-C-TC--CAG-G-G-A-CCAGA-CTT-A--A--A-----CA--A-----A-----T--C-TT-TTA-GG--A--AACA-TCT-------TTCA-AT-GCTACATGTAATATAT-CT-AA-GGTCT--------A
gi|103809 : gtgaaacagT----GACCCTTGTGGTGG-CC---GC-AAA---TTTG----A-C-CT--CA--GAG-A-CCAGA-CAT-G--A--------CA--A-----G-----T--C-TA-TTAGGG--G--ACCT-CCA-------TGCA-AT-GCTACATGTAACGTAT-CT-AA-
gi|103816 : gtaaaacagT----AATCGCTGTGGCAG-CC---CC-AAA---TTAG----T-C-CA--CGG-G-G-TACCTGA-C-T-TT-A--A-----CA--A-----C-----C--T-TT-TTAGTG--G--ACCT-CCA-------TACA-AT-GCTACATGTAAAATAT-CT-AA-GATCT--------ATA
gi|103826 : gtaaaacagT----GATCCCTGTGGCGG-CC---CC-AAA---TTTG----A-C-CCC-AAG-GA----CCCGA-C-T-TC-A--A-----CA--A-----A-----C--C-TT-TTAGGG--T--ACCT-CCA-------TTCA-AT-GCTTTATGTAAAATAT-AT-AA-GGTCT--------AT
gi|103847 : gtaaaacagT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-
gi|103834 : acattttccttatataactctatgtaaaaaaT----GACCCATGTGGCGG-TC---CC-AAA---TTTG----ATC-CC--AGG-GA----CCCGA-CTT-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACTT-CCA-------TGCA-AT-GCTACATGTCAAcccagggacc
gi|103842 : taaaacagT----GAGCTCTGTAGCAA-TC---CC-AAA---TTTG----A-C-CC--CAG-GGA-C-CCAAC-T-T-C--A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ACCC-CCA-------TGCA-AT-GTTACATGTAAAATGT-
gi|103818 : T----GACCCATGTGGCGG-CC---CC-AAA---TTTG----A-C-TC--TAG-G-G-A-CCAGA-CTT-C--A--C-----CA--T-----A-----T--C-TT-TTAGGG--A--ACT--CCA-------TGCA-AT-GATACATGTACACTAT-CT-AA-GGTCT--------A
gi|103812 : gtaaaacagT----GACCCTTGTGGCGA-TC---TC-AAA---TTTG----A-C-CC--CAG-G-G-A-CCTGA-C-T-TC-A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--ATCT-CCA-------TGCA-AA-GCTACATGTAAAATAT-CT-AA-A
gi|103790 : gtaaaacagT----GACACCTGTGGCAG--C---CTTAAA---TTTG----A-C-AC--CAGAGAC-C-CCAAC-T-T-G--A--A-----CA--A-----A-----TA-T-TT-A---AGGCG--ACCT-TCA-------TGCA-AT-ACAACATG-AAAAAAT-CT-AA-GATCT--------GGACATT--
gi|103832 : cctatgtaaaacagT----GACCCATGTGGCAG-CC---C-TAAA---TTCGA---A-C-CC--AGG-GA--C-CCATC-T-T-C--A--G-----CA--A-----AC----C--T-TT-A-AGGG--G--ACCT-CCA-------TGCA-TT-ACTACATGTAAAGTAT-CT-AA-GGTCT--------A
gi|103846 : taaaacagT----GACCCCTGTGGCAG-CC---CC-AAA---TTTG----A-C-
gi|103827 : acattttccctatatagctctttgtaaaacagT----GACCCCTTTGGCAA-CC---CA-AAA---TTTG----A-C-CC--TTG-GGA-C-CCAAC-T-T-C--A--A-----CA--A-----A-----T--C-TT-TTAGGC--G--ACCT-CCA-------TGCA-AT-GCTCCATGTAAAATAT-CT-AA-ctcagggatcc
gi|103824 : gtaaaacag----GACCACTGTGGCAG-CC---CC-AAA---TTTG----A-C-CC--CAG-G-G-A-CCTGA-C-T-------T-----CA--AGA---A-----C--T-CT-TTA--------A-TC-CCA-------TGCA-AT-GCTTAATGTAAAATAT-TT-AA-AGTCT--------ATGCCTT--GAACCA----------TGTT-----------T--TT-----TAAAGTTTTGCT-T----AAA--
gi|103814 : gtaaaacaggACCCCTGTGGCGG-CC---CC-GAA---CTTG----A-C-CCC-AAG-GA----CCCGA-T-T-TT-A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--CCT--CCA-------AGCA-AT-GCTACATGTAAAATAT-CT-AA-G-TGT--------AGGCATT--GAACTTTCAGAGAAACTGTT-----------T--TT-----TAAAATTTTGCT-T----AAA--A----TTGCTTATA--AGCC-CTGTGG
gi|103843 : gtaaaacagttACCCCTGTCGCGG-CC---CC-ATA---TTTG----A-C-AT--CAG-GAA-C-CCAAC-C-T-C--A--A-----CA--A-----A-----T--CGTT-AAGGGG--A--ACT--CCA-------TACA-AT-GCTACATGTAAAATATCTC-A
gi|103844 : CCTGTGGCAG-CC---CC-AAA---TTTT----A-C-CC--AAG-GGA-T-CT-GA-C-T-TC-A--A-----CA--A-----A-----T--C-TT-TTAGGG--G--GTCT-CCA-------TGCA-AT-GCTACATGTAAAATGC-CT-AA-GGTCT--------AGGCCTT--G---------------CACT-----------T--
gi|103804 : TATGGAGGTCC---CCTAAAAGATTTG----T-T-GA--AGGCGGG-T-CC----C-T-GGGA--T-----CA--A-----A-----T--T-T------GG--G--GCCA-CCA-------
gi|103845 : gtaaaacagtggcccctg-T-G--A--A-----CA--A-----A-----C--T-TG-ATAGAG-----ACCA-TCA-------GCCA-AT-GCTACATATAAAATATCTC-AA-AGTCT--------A--------G---------------T------------------T-----TTACAGTTTG-G-GAGAAAAA--GATTAT------TA--GACC-CTGTGGTGGCCCCG-AAGT--------------TGAAATCATGG------ACCC-AGTTTGACC-A-A---ACATGGTAGAAGGCCATTAGACAA-TGAAATAcaatgctatatgtaaaatatctaagatctaggtcttgagctt
gi|103847 : tACATT--T---------------TCCT-----------T--ATA----TAACTCTATG-T-A----AAA--A----A------TG--ACCC-CTGTGGCAGCCCCA-AATT--------------TGACCCCAGGG------ACC
gi|103848 : CATT--T---------------TCCC-----------T--ATA----TAAC--TATA-T-A----AAAC-G----T------TA--ACCT-GTGTGGCAGCCCAA-AATT--------------TAACCCCAGGG------ACCC-GATTTCAAC-A-A---CT
gi|103849 : T-----TATCACCTGA-G-T----AAA--GGA--T------TG--ACCT-CTGTGGAGGCCCTA-AATT--------------TTACAAAAGGG------GTCC-AGATTGATC-A-A---ATTTTATACAGGGCTACCAGACAAattttacaggacctccatgcaatatacatgtaagat
gi|103852 : CACCTGA-T-C----AAA--GGA--T------TG--ACCC-CTGTGGAAGCCCCTAAATT--------------TGACAAAAGGA------GTCC-AGACTGATC-A-A---ATTTTATACAGGACTACCAGACAA
gi|103851 : CACCTGA-T-C----AAA--GGA--T------TG--ACCC-CTGTGGAAGCCCCTAAATT--------------TGACAAAAGGA------GTCC-AGACTGATC-A-A---ATTTTATACAGGACTACCAGACAA
gi|103850 : CACCTTA-G-T----AAA--GGA--T------CG--ACCC-CTGTGGAAGCCCTA-AATT--------------TGACAAAAGGA------GTCC-AGATTGATC-A-A---ATTTTATACAGGGCTACCA
gi|103788 : CACTCTA-TGT----AAA--A----CAG----TG--ACCC-CTGTGGCGGCCCCA-AATT--------------TGACCCCAGGG------GCCC-GTCTTCAAC-A-A---
gi|103790 : atCTATG-T-A----AAACAG----T------GA--CAC--CTGTGGCAGCCTTA-AATT--------------TGACACCAGAG------ACCCCAACTTGAAC-A-A---atctttagtggacccccacgcaagattcaatgaaaaat
gi|103797 : cG-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-TATT--------------TCACCTCAGCA------ACCC-AGTTTGAAC-A-A---TTTTGATAAAGAACTATCAACCAAatatttaaggcgaccttcatgcaatacaacatgaaaaaatctaagatctggacatt
gi|103799 : G-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-AATT--------------CCACCCCAGCA------ACCC-GGTTTGAAC-A-A---TCTTGATAAAGGACTATCAACCAA
gi|103800 : G-T-A----AAA--G----T------TA--ATCT-CTGTGGAAGCCCTT-AATT--------------TCACCCCAGTA------ACCC-GGTTTGAAC-A-A---TCTTGATAAAGGACTATCAACCAA
gi|103798 : G-T-A----AAA--G----T------TA--ACCT-CTGTGGAAGCCCTT-AATT--------------TCACCTCAGTA------ACCC-GGTTAGAAA-A-A---TCTTGATAAAGGACTATCAACCAA
gi|103829 : -T----AAA--G----T------TA--AACT-CTGTGGAAGCCCTT-AATT--------------TCACCCCAGCA------ACCC-AGTTTGAAC-A-A---TTTTGATAAAGAACTATCAACCAGTTGACATA
gi|103830 : -T----AAAC-G----G------TG--ACCC-CTGTGGTGGCCCCA-AATT--------------TGACCCCAGGG------ACCC-AACTTCAAC-A-AATCTTTTtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : -T----AAAACG----T------TA--ACCT-GTGTGGCAGCCCAA-AATT--------------TAACCCCAGGG------ACCC-GATTTCAAC-A-A---CTaggggacctcaatgcaatgctacatgtaaaata
gi|103835 : ----AAA--G----T-------G--ACCC-CTTTGGCGGCCCCA-AATT--------------TGACCCCAGGG------ACTC-GATGTCAAC-A-A---ATCTGTTAGAGGACattttacaggacctccatgcaatatacatgtaagatatctaaggtctacgccttgaactt
gi|103842 : ------TG--AGCT-CTGTAGCAATCCCA-AATT--------------TGACCCCAGGG------ACCC-AACTTCAAC-A-AATCTTTTccctatgcaatgcaatatgtaaaatatttaaggtcta
gi|103808 : CC-CTGTGGTGGCCCCA-AATT--------------TGACCCCAGGG------ACCC-GACTTCAAC-A-AATCTTTTaggggacccccatgcaatgttacatgtaaaatgt
gi|103811 : gtaaaacagtgacCC-CTGTTGCGACCCTC-AATT--------------TGACCCCAGGG------ACCC-GACTTCAACAA-A---TTTTaggagaccgccatgcaatgctacatgtaatatatctaagatcta
gi|103815 : gcaaaacagtgacCC-CTGCGGCAGCCCCA-AATT--------------TTACCCCAGTG------ACCC-AACTTtaggggacctccatgcaatgctacatgtaaaatatctaa
gi|103839 : gtaaaacagtggcCC-CTGTGGCGGCCCAA-AATT--------------TGACCCCAGTG------ACCT-GACCTCAAC-A-A---ATCTTTTAGAGGACcacaaacctttttaggggacccccatacaatgctacatgtaaaatat
gi|103836 : tgatCC-CTGTGGCAGCCCCA-AATT--------------TGACCCCAGGG------ACCC-GACTTCAAC-A-ctccatgcaatgctacatttaaaatat
gi|103824 : tgac-CTGTGGCAGCCCCA-AATT--------------TGACCCCAGGG------ACCT-GACTTCAAG-A-A---CTCTggacctctatgcaatgctatatgcacatatctaaggtctagacctt
gi|103825 : gtaaaacagggacca-CTGTGGCAACCCCA-AATT--------------TTACCCCAGGG------ACCT-GACCTCAAC-ACA---TTTTttaatcccatgcaatgcttaatgtaaaatatttaaagtctatgccttgaaccatgttttttaaagttttgcttaaa
gi|103840 : gtgaaacaatgacacTGTGGCAGCCCCA-AATT--------------TGACCCCAGGG------ACCC-tcagaggatctccatgcaatgctaaatgtaaaatatctaagttcta
Alignments
lowQualScore : 777777777777777777777777777 1111111 1 222222222222222 11111 111111 222222222222222 111
lowQualScore : 5 5 777777777777777777777777777 1 3333333 1111 2 0 44 0 0 8 1 666 555 0 00 0 44 0 22 1111 111 222 0 1 2 1 444444444444444 0 99999999999 22 11111 5 4444 3333 9999999 3333 333333 0 1 33 222222222222222 55555 000 4 33 2
lowQualScore : . . ........................... . ....... .... . . .. . . . . ... ... . .. . .. . .. .... ... ... . . . . ............... . ........... .. ..... . .... .... ....... .... ...... . . .. ............... ..... ... . .. .
lowQualScore : 0 0 000000000000000000000000000 8 9999999 3333 9 6 22 6 6 5 3 444 000 6 88 6 00 6 33 2222 000 333 3 1 6 3 000000000000000 2 66666666666 33 00000 5 2222 7777 8888888 9999 444444 9 0 33 000000000000000 66666 999 0 44 9
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCA----------------TGTAAG---ATCAC-CTGAGTAAA--A-CAGT----GACCCCTGTGGCGGCCCC-AAATTTGA-CCCCAGGG-AC-C-CAGAC-T-C-A-A-C-AAAT--C-TT-TT-AGGGGACCT-CCATGCAAT----GCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTTC--------------ACCCCA-----GCA-ACCCGGTTTGAACAAT--CTTGATAAAGGACT-ATCAACCAATTGACATA
Reference ( family-363 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCA----------------T----------CAC-CTGAGTAAA--G-GATT----GACCCCTGTGGCGGCCCC-AAATTTGA-CCCCAGGG-GC-C-CAGAC-T-N-A-N-C-AAAT--C-TT-NT-AGGGGACCN-CCATGCAAT----GCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---NA----AA-------G----T------TAACCCCTGTGGNAGCCCCNAATTTG--------------ACCCCA-----GGG-ACCCGGCTTGAACAAT--TTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCA----------------TGTAAGTTGATCAC-CTGAGTAAA--G-GATT----GACCCCTGTGGGAGCCAT-AAATTTGA-CAAAAGGA-GT-C-CAGAC-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCAGACAAT----ACTAAATG---TAAAATATTA---AAACT-CCATACATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTTATTTC--------------ACCTCA-----GCA-ACCCAGTTTGAACAAT--TTTGATAAAGAACT-ATCAACCAATTGACATA
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCTA----------------TGTAAGTCGATCAC-CTTAGTAAA--G-GATC----GACCCCTGTGGAAGCCCT-AAATTTGA-CAAAAGGA-GT-C-CAGAT-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCAGAAAAT----ACTAGATG---TAAAATATTC---AAACT-ACATACATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTTC--------------ACCTCA-----GTA-ACCCGGTTAGAAAAAT--CTTGATAAAGGACT-ATCAACCAATTGACATAcaacat
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCCA----------------TGTAAGTTTATCAC-CTGAGTAAA--G-GATT----GACCTCTGTGGAGGCCCT-AAATTTTA-CAAAAGGG-GT-C-CAGAT-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCAGACAAT----ACTAGATG---TAAAATATTC---AAACT-CCATGCATTG---------------TGCT-----------T--AT-----AAACACTTTG-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTCC--------------ACCCCA-----GCA-ACCCGGTTTGAACAAT--CTTGATAAAGGACT-ATCAACCAATTGATAcaacat
gi|103779 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCA----------------T----------CAC-CTGATCAAA--G-GATT----GACCCCTGTGGAAGCCCCTAAATTTGA-CAAAAGGA-GT-C-CAGAC-T-G-A-T-C-AAAT--T-TT-AT-ACAGGACTA-CCAGACAAT----ACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---TA----AA-------G----T------TAAACTCTGTGGAAGCCCTTAATTTC--------------ACCCCA-----GCA-ACCCAGTTTGAACAAT--TTTGATAAAGAACT-ATCAACCAGTTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCAA----------------TGTAAGTTGATCAC-CTAAGTAAA--G-GATT----GATCCCCGTGGAAGCCCT-AAATTTGA-CAAAAAGG-GCTC-CAGAT-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCAGACAAT----ACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--AG-----TAACATTTTG-T---AA----AA-------G----T------TAACCTCTGTGTGAGCCCTTAATTTC--------------ACCCCA-----GCA-ACCAGGTTTGAACAAT--CTTGATAAA-GATTAATCAACCAATTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCA----------------T----------CAC-CTGATCAAA--G-GATT----GACCCCTGTGGAAGCCCCTAAATTTGA-CAAAAGGA-GT-C-CAGAC-T-G-A-T-C-AAAT--T-TT-AT-ACAGGACTA-CCAGACAAT----ACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---TA----AA-------G----T------TAAACTCTGTGGAAGCCCTTAA---------------------------------ACCCAGTTTGAACAAT--TTTGATAAAGAACT-ATCAACCAGTTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCCA----------------TGTAAGTCGATCAC-CTGAGTAAA--G-GATT----GACCCCTCTGAAGGCCCT-AAAT---------------------------------C-AAAT--T-TT-AT-ACAGGGCTA-CCAGAAAAT----ACTAGATG---TAAAATATTC---AAACA-ACATACATTG---------------TGCT-----------T--GT-----TAACACTTTG-T---AA----AA-------G----T------TAATCTCTGTGGAAGCCCTTAATTTC--------------ACCCCA-----GTA-ACCCGGTTTGAACAAT--CTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCA----------------TGTAAGCCGATTAC-CTGAGTAAA--G-GATT----GACTCCTGTGGAGGCCCT-AAATTTGA-CAAAAGTG-GT-C-TAGAT-T-G-A-T-C-TAAT--T-TT-AT-A--------------CAA--------------------ATATTC---AAACG-CCATACATTG---------------TGCT-----------T--AT-----TAACACTTTG-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTTcaacat
gi|103784 : -----TAACTCTATG-T---AA----AA-------C----CA-----TGACCCCTGTGGCGGCCCCAAATTTG--------------ACTACA-----AGG-ACCCGACTTCAACAATCCTTT--TAGGGGA
gi|103784 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatggaggcccctaaaT----GACCCCTGTGGCGGCCCC-AAATTTGA-CTACAAGG-AC-C-C-GACTT-C-A-A-C-AATC--C-TT-TT-AGGGGATCT-CCATGCAAT----GTTACATG---TAAAATATCT---AAGGT-CTAtctccatgcaatgttacatgtaaaatatctaaggtctacatcttaaacttccggagaacatgtttgaaacgttaa
gi|103785 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatggaggcccctaaataactctatgtaaaaccaATACATCT--TAAAAACAAGGGGCCCAAGTAGGCCTAAGACACT----------CAT-CTGAGTAAC--A-GATT----GACATCTA-ACCAGGCTT-GAATTTTA-CCCAATGG-GC-C--AGAC-----A-T-G-AAGTAAC-TT-GC-AACAGAGCAACCAGGTAATACCTGCTTCATACTCTAAACTTTTTGAGAAGAT-TTATT--TTA---------------TGTTC----------T--ATCATTATAACACTATG-T---TA----A--------G----TG-----TGACCTCTGTTGCAACTCCTTATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCTGGCTTGAACTAT--CCTGGGAGAGGACC-ACCAGCCAATcatcttaaacttccggagaacatgtttgaaacgttaa
gi|103786 : g----------------T----------CGT-CTGAGTAAA--A-GAAT----GACCCCTGTGGATGTTCC-GCATTTGAGCCACA-AC-AC-C-CAG-C-T-------C-AAAC--T-TA-GT-ACAAGGCCA-C----CAAT----AATAGATG---TAAAACATTT---AA--TACCGTGCATTG---------------TTCT-----------T--TT-----TGATA
gi|103787 : gaaacaaatgggcctaagacac----------------T----------TAC-CTGAGGAAA--A-TATT----GACTCCTGT------CCC-AAATTTGA---CCAGAGCGT-C-TCGACTT-G-A-A-C--AAT--C-TTGCT-ACAGAGTCA-TCACACAAT----AGTAAATG---TAAAA
gi|103788 : cgcA----------------T----------CACTCTATGTAAA--A-CAGT----GACCCCTGTGGCGGCCCC-AAATTTGA-CCCCAGGG-GC-C-CGTCT-T-C-A-A-C-AAAT--C-TT--T-AGTGGACCC-CCACGCAAG----ATTCAATG---AAAAAT
gi|103789 : C-CTATGTAAA--A-CAGT----GACCCCTGTGGCAGCCTC-AAATTTGA-CTTCA-------C-CAGAC-T-T-A-AAC-AAAT--C-TT-TT-AGGGAACAT-CCATTCAAT----GCTACATG---TAAAATAT
gi|103790 : C-CTATGTAAA--A-CAGT----GACACCTGTGGCAGCCTT-AAATTTGA-CACCAGAG-AC-C-CCAACTT-G-A-A-C-AAAT--A-TT-TA-AGGCGACCT-TCATGCAAT----ACAACATG----AAAAAATCT---AAGAT-CTGGACATT
gi|103791 : C-CTATGTAAA--A-CAGT----GACCCCTGTGGCAGCCTC-AAATTTGA-CTCCA-------C-CAGACTT-A-A-A-C-AAAT--C-TT-TT-AGGGAACAT-CCATTCAAT----GCTTCATG---TAAAATAT
gi|103792 : C-CTATGTAAA--A-CAGT----GACCCCTGTGGCAGTCTC-AAATTTGA-CTCCA-------C-CAGAC-T-T-A-AAC-AAAT--C-TT-TT-AGGGAACAT-CCATTCAAT----GCTGCATG---TAAAATAT
gi|103793 : C-CTATGTAAA--A-CAGT----GACCCCTGTGGCAGCCTC-GAATTTGA-CTCCA-------C-CAGAC-T-TTA-A-C-AAAT--C-TT-TT-AAGGAACAT-CCATTCAAT----GCTACATG---TAAGATAT
gi|103794 : -CTGTGTAAA--A-CAGT----GACCCCTGTGGCGGCCCC-AAATTTGA-CACAAGGG-AC-C-T-GACTT-T-A-A-C-AAAT--C-TT-TT-AGGAGACCT-CCAGGCAAT----GCTACAAG---CAAAAAAT
gi|103795 : TAAGTAAA--A-AAGT----GACCCCTGTGGCAGCCCC-AAATTTGA-CCTCAGGG-AC-C-CAACT-T-C-A-A-C-AAAT--C-TT--T-AAGAAATAT-CCATGCAAT----GCTACATG---TAAAATAT
gi|103796 : GAGAAAA--A-GATTATTAGACCC-TGTGGTGGCCCC-GAAGTTGA-AATCATGG-AC-C-CAGTT-T-G-A-C-C-AAAC--A-TG-GT-AGAAGGCCA-TTAGACAAT----GAAATATT---TAAAAAATCT---AAGCT-CCTGACATTG---------------AACT-----------TTCAG-----AAACATTTT
gi|103797 : G-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTTATTTC--------------ACCTCA-----GCA-ACCCAGTTTGAACAAT--TTTGATAAAGAACT-ATCAACCAATtaa
gi|103798 : G-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTTC--------------ACCTCA-----GTA-ACCCGGTTAGAAAAAT--CTTGATAAAGGACT-ATCAACCAAT
gi|103799 : G-T---AA----AA-------G----T------TAACCTCTGTGGAAGCCCTTAATTCC--------------ACCCCA-----GCA-ACCCGGTTTGAACAAT--CTTGATAAAGGACT-ATCAACCAAT
gi|103800 : G-T---AA----AA-------G----T------TAATCTCTGTGGAAGCCCTTAATTTC--------------ACCCCA-----GTA-ACCCGGTTTGAACAAT--CTTGATAAAGGACT-ATCAACCAAT
gi|103801 : GTAAA--ACGAT-----GACCCCTGTGGCAGCCCC-AAACTTGA-CCTAAGGG-AC-C-CA-ACAT-C-A-A-C-AAAT--C-TT-TT-AGGGGACCT-CCATGCAAT----GCTACATG---TAAAATATCT---AAGGT-CTAGGCCTTGAATTTGCAGAGAAAATGTT-----------T--TT-----TAAAATTTTGCT---TA----AATGTGCTTA----T------TAA-CCCTGTGGTAG
gi|103802 : GTAAA--A----T----GACCCCTGTGGTGGCCCC-AAATTTGA-ACCTAGGG-AT-C-C-GACTT-C-A-A-C-AAAT--C-TT-TT-ACAGGACCT-CCATGCAAT----GCTAAATG---TAAAATATCT---AAGGT-CTA
gi|103803 : GTAAA--A-CAGT----GACCCCTGTGGCAGCCCC-AAATTTGT-CCACAGAA-AC-C-CAACT-T-C-A-A-C-AA-T--A-TT-TT-ACAGGACCT-CCATGCAAT----GTTACATG---TAAAATATCT---AA
gi|103804 : GTAAA--A-CAGT----GGCCCCTGTGGTGGCCCC-AAATTTGA-TCCCAGGG-AC-C-CGCCT-T-C-A-A-C-AAAT--C-TT-TT-AGGGGACCT-CCATACAAT----GCTATATG---TAAAATATCT---AAGAT-CTAGGTCTTG---------------AGCT-----------T--
gi|103805 : GTAAAACG-G--T----GACCCCTGTGGCGGCCCT-AAATTTGG-CCCCAGGG-AC-C-CGATT-T-C-A-A-C-AAAT--C-TT-TT-ACAGGACCC-CCATGCAAT----GCTACATG---TTAAGT
gi|103806 : GTAAA--A-GAGT----GACCCCTGTGGCGGCCCC-AAATTTGG-CCCCGGGGAGC-C---GACTT-C-A-A-A-AAAT--C-TT-TTAAGAGAACAT-CCATGCAAT----GCTACATG---TTAAATATCT---AAGAT-CTA
gi|103807 : GTAAA--A-CAGT----GACCCCTGTGGCAGCCCC-AAATTTGA-CCTCAGGG-AT-C-C-GAC-T-A-C-A-CAAAAT--C-TT-TA-AAGGGAACA-CCCTGCAAT----GCTACATG---TAAAATATCT---AA
gi|103808 : GTAAA--A-CAGT----GACCCCTGTGGTGGCCCC-AAATTTGA-CCCCAGGG-AC-C-C-GACTT-C-A-A-C-AAAT--C-TT-TT-AGGAGACCG-CCATGCAAT----GCTACATG---TAATATATCT---AAGAT-CTA
gi|103809 : GTAAA--A-CAGT----GACCCTTGTGGTGGCCGC-AAATTTGA-CCTCAGAG-AC-C--AGAC-A-T-G-A-C-AAGT--C-TA-TT-AGGGGACCT-CCATGCAAT----GCTACATG---TAACGTATCT---AA
gi|103810 : GTAAA--A-CAGT----GACCC-TATGGCGGCCCC-AAATTTGA-CTCCAGGG-AC-C-T-GAC-T-TCA-A-C-AAAT----TT-TT-ATGGGACCT-CCATGCAAT----GCTACATG---TTAAATATCT---AAGGT-CTAGGCCTTG---------------AACTTTCAGAGAAAAT--GT-----TAAAGTTTTG-TTTAAA----AA-------G----TGCTTA-TAACTCCTGTGG
gi|103811 : GCAAA--A-CAGT----GACCCCTGTTGCGACCCT-CAATTTGA-CCCCAGGG-AC-C-C-GAC-T-TCA-A-C-AAAT----TT-TT-AGGGGACCT-CCATGCAAT----GCTACATG---TAAAATATCT---AA
gi|103812 : GTAAA--A-CAGT----GACCCTTGTGGCGATCTC-AAATTTGA-CCCCAGGG-AC-C-T-GACTT-C-A-A-C-AAAT--C-TT-TT-AGGGGATCT-CCATGCAAA----GCTACATG---TAAAATATCT---AA
gi|103813 : GTAAA--A-CATT----GACCCCTGTGGTGGCCTC-AAATTTGA-CCCAAAGG-AC-C-CAACT-T-C-A-A-C-AAAC--C-TT-TT-AGTGGACCC-CAATGCAAT----GCTACACA---TAAAATATCT---a
gi|103814 : GTAAA--A-CAGT----TACCCCTGTGGCGGCCCC-GAACTTGA-CCCCAAGG-AC-C-CGATT-T-T-A-A-C-AAAT--C-TT-TT-AGGGG-CCT-CCAAGCAAT----GCTACATG---TAAAATATCT---AA-GT-GTAGGCATTGAACTTTCAGAGAAACTGTT-----------T--TT-----TAAAATTTTGCT---TA----AA-------A----TTGCTTATAAGCCCTGTGGcaa
gi|103815 : GTAAA--A-CAGT----GGCCCCTGCGGCAGCCCC-AAATTTTA-CCCCAGTG-AC-C-CA-AC-T-T-C-A-C-AAAC--CTTT-TT-AGGGGACCC-CCATACAAT----GCTACATG---TAAAATAT
gi|103816 : GTAAA--A-CAGT----AATCGCTGTGGCAGCCCC-AAATTAGT-CCACGGGG-TA-C-CTGAC-T-TTA-A-C-AACC--T-TT-TT-AGTGGACCT-CCATACAAT----GCTACATG---TAAAATATCT---AAGAT-CTA
gi|103817 : GTAAA--A-CAAT----GACCCATGTGGCGGCCCT-AAATTTGA-CTCTAGGG-TC-T-C-GAC-TAT-A-A-C-AAAC--C-TA-TT-AGGGGACCT-CCATGCAAT----ACTACAGG---TAAAATATCT---AAta
gi|103818 : GTAAA--A-CAGT----GACCCATGTGGCGGCCCC-AAATTTGA-CTCTAGGG-A--C-CAGACTT-C-A-C-C-ATAT--C-TT-TT-AGGGAA-CT-CCATGCAAT----GATACATG---TACACTATCT---AAGGT-CTA
gi|103819 : GTAAA--A-CAGT----GATCCCTGTGGCAGCCCC-AAATTTG--TCCCAAGG-GA-C-CTGACTT-C-A-A-C-AAAT--C-TT-TT-AGGGGAACC-CCATTCAAT----GCTACATG---GAAAATATCT---AA
gi|103820 : GTAAA--A-CAGT----GATCCCTGTGGCAGCCCC-AAATTTG--TCCCAAGG-GA-C-CTGACTT-C-A-A-C-AAAT--C-TT-TT-AGGGGAACC-CCATTCAAT----GCTACATG---GAAAATATCT---AA
gi|103821 : GTAAA--A-CAGT----GATCCCTGTGGCAGCCCC-AAATTTG--TCCCAAGG-GA-C-CTGACTT-C-A-A-C-AAAT--C-TT-TT-AGGGGACCC-CCATTCATT----GCTACATG---GAAAATATCT---AA
gi|103822 : GTAAA--A-CAGT----GACCCCTGTGGTGACCCCCAAATTTGA-CCTCAGGG-AC-CTC--AC-T-T-ACA-C-AAAT--C-TT-TT-AGGGGACCT-CCACGCAAT----GCTACATA---TAAAATAT
gi|103823 : GTGAA--A-CACT----GACCCCTGTGGCGTCACC-AAATTTGA-TGCCAGGA-AC-C-T-GACTT-C-A-A-C-AAAT--A-TT-TT-AGGGGACCT-TCATGCAAT----GCTACATG---TAAAATATCT---AAGGT-CTAGACCTT
gi|103824 : GTAAA--A-CAGG----GACCACTGTGGCAGCCCC-AAATTTGA-CCCCAGGG-AC-C-T-GACTT-C-A-A-G-AACT--C-TT--T-A----ATC--CCATGCAAT----GCTTAATG---TAAAATATTT---AAAGT-CTATGCCTTGAACCA----------TGTT-----------T--TT-----TAAAGTTTTGCT---TA----AA-------
gi|103825 : GTGAA--A-CAAT----GACACCTGTGGCAACCCC-AAATTTTA-CCCCAGGG-AC-C-TGACC-T-C-A-A-C-ACAT--T-TT-TC-AGAGGATCT-CCATGCAAT----GCTAAATG---TAAAATATCT---AAGTT-CTA
gi|103826 : GTAAA--A-CAGT----GATCCCTGTGGCGGCCCC-AAATTTGA-CCCCAAGG-AC-C-C-GACTT-C-A-A-C-AAAC--C-TT-TT-AGGGTACCT-CCATTCAAT----GCTTTATG---TAAAATATAT---AAGGT-CTA
gi|103827 : GTAAA--A-CAGT----GACCCCTTTGGCAACCCA-AAATTTGA-CCCTTGGG-AC-C-CAACT-T-C-A-A-C-AAAT--C-TT-TT-AGGCGACCT-CCATGCAAT----GCTCCATG---TAAAATATCT---AAt
gi|103828 : GTGAA--A-CAGT----GACCCCTGTGACAGCCTC-AAATTTGA-CTCCAGGG-A--C-CAGACTT-A-A-A-C-AAAT--C-TT-TT-AGGAAACAT-CT-TTCAAT----GCTACATG---TAATATATCT---AAGGT-CTA
gi|103829 : A----AA-------G----T------TAAACTCTGTGGAAGCCCTTAATTTC--------------ACCCCA-----GCA-ACCCAGTTTGAACAAT--TTTGATAAAGAACT-ATCAACCAGTTGACATA
gi|103830 : tTAAAC-G-G--T----GACCCCTGTGGTGGCCCC-AAATTTGA-CCCCAGGG-AC-C-CAACT-T-C-A-A-C-AAAT--C-TT-TT-AGGGGACCT-CAATGCAAT----GCTACATG---TAAAATAtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : TAAA--A-CGTT----AACCTGTGTGGCAGCCCA-AAATTTAA-CCCCAGGG-AC-C-CGATT-T-C-A-A-C-AACT--A-TT-TT-ACAGGACCT-CCATGCAAT----A-TACATG---TAAGATATCT---AAGGT-CTACGCCTTG---------------AACT-----------T--
gi|103832 : TAAA--A-CAGT----GACCCATGTGGCAGCCCT-AAATTCGA-ACCCAGGG-AC-C-CATCT-T-C-A-G-C-AAAC--C-TT-TA-AGGGGACCT-CCATGCATT----ACTACATG---TAAAGTATCT---AAGGT-CTA
gi|103833 : TAAA--A-CAGT----GTCCGCTGTGGCAGCCTC-AAATTTGA-CTCCA-------C-CAGAC-T-T-A-AAC-AAAT--C-TT-TT-CAGGAACAT-CCATTCAAT----GCTACATG---TAAAATAT
gi|103834 : TAAA--A-CAGT----GACCCATGTGGCGGTCCC-AAATTTGA-TCCCAGGG-AC-C-C-GAC-T-TCA-A-C-AAAT--C-TT-TT-AGGGGACTT-CCATGCAAT----GCTACATG---TCAA
gi|103835 : AAA--G----T----GACCCCTTTGGCGGCCCC-AAATTTGA-CCCCAGGG-AC-T-C-GATGT-C-A-A-C-AAAT--C-TG-TT-AGAGGACCC-CTATGCAAT----GCAATATG---TAAAATATTT---AAGGT-CTA
gi|103836 : T----GACCCCTGTGGCAGCCCC-AAATTTGA-CCCCAGGG-AC-C-C-GACTT-C-A-A-C-A----------------GGACCT-CTATGCAAT----GCTATATG---C-ACATATCT---AAGGT-CTAGACCTT
gi|103837 : T----GACCCCTGTGGCGGCCCC-AAATTTGA-CTCCAGGG-AC-C-CAATT-T-C-A-A-C--AAT--C-TT-TT-AGGGAATCT-CCATGCAAT----ACTACATG----AAAATATCT---AAGGT-CTACACCTTG---------------AACT-----------T--
gi|103838 : T----GACTCCTGTGGCGGCCCC-AAATTTGA-CACCAGCG-AC-C-C-GAC-T------------------T-TT-AGGGGACCT-CCATGCCAT----GCTACATG---TAAAATATCT---AAAGT-CTAAGCATTG---------------
gi|103839 : T----GATCCCTGTGGCGGCCCA-AAATTTGA-CCCCAGTG-AC-C-TGACC-T-C-A-A-C-AAAT--C-TT-TT-AGAGGACCT-CCATGCAAT----GCTACATT---TAAAATAT
gi|103840 : T----GACCCATGTGGCAGCCCC-AAATTTGA-CCCCAGGG-AC-C-CCGAC-T-T-C-CAC-AAAT--C-TT-TT-AGGGGACCT-CCATGCAAT----GATACATG---TAGAACATTT---AAGGT-CTAGGCCTTG---------------AACT-----------T--
gi|103841 : T----GACCCCTGTGGCAGCCTC-AAATTTGA-CTTCA-------C-CAGAC-T-T-A-AAC-AAAT--C-TT-TT-AGGGAACAT-CCATTCAAT----GCTACATG---TAAAATAT
gi|103842 : T----GAGCTCTGTAGCAATCCC-AAATTTGA-CCCCAGGG-AC-C-CAACT-T-C-A-A-C-AAAT--C-TT-TT-AGGGGACCC-CCATGCAAT----GTTACATG---TAAAATGT
gi|103843 : ACCCCTGTCGCGGCCCC-ATATTTGA-CATCAGGA-AC-C-CAACC-T-C-A-A-C-AAAT--C-GT-TA-AGGGGAACT-CCATACAAT----GCTACATG---TAAAATATCT---
gi|103844 : CCTGTGGCAGCCCC-AAATTTTA-CCCAAGGG-AT-C-T-GAC-T-TCA-A-C-AAAT--C-TT-TT-AGGGGGTCT-CCATGCAAT----GCTACATG---TAAAATGCCT---AAGGT-CTAGGCCTTG---------------CACT-----------T--ca
gi|103845 : -T-G-A-A-C-AAAC--T-TG-AT-AGAG-ACCA-TCAGCCAAT----GCTACATA---TAAAATATCTC--AAAGT-CTA------G---------------T------------------T-----TTACAGTTTG-G---GAGAAAAA-------GATTAT------TAGACCCTGTGGTGGCCCCGAAGTTG--------------AAATCA-----TGG-ACCCAGTTTGACCAAA--CATGGTAGAAGGCC-ATTAGACAA-TGAAATA
gi|103846 : tCATTT---------------TCCC-----------T--ATA----TAGCTCTTTG-T---AA----AACA-----G----T-------GACCCCTGTGGCAGCCCCAAATTTG--------------ACCTCA-----GGG-ATCC
gi|103847 : aCATTT---------------TCCT-----------T--ATA----TAACTCTATG-T---AA----AA-------A----A------TGACCCCTGTGGCAGCCCCAAATTTG--------------ACCCCA-----GGG-ACC
gi|103848 : aCATTT---------------TCCC-----------T--ATA----TAAC--TATA-T---AA----AAC------G----T------TAACCTGTGTGGCAGCCCAAAATTTA--------------ACCCCA-----GGG-ACCCGATTTCAACAAC--TATTTTACAGGAC
gi|103848 : TAAA--A-CGTT----AACCTGTGTGGCAGCCCA-AAATTTAA-CCCCAGGG-AC-C-CGATT-T-C-A-A-C-AACT--A-TT-TT-ACAGGACCT-CCATGCAAT----A-TACATG---TAAGATctccatgcaatatacatgtaagat
gi|103849 : cattttccctatataactataA----------------T----------CAC-CTGAGTAAA--G-GATT----GACCTCTGTGGAGGCCCT-AAATTTTA-CAAAAGGG-GT-C-CAGAT-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCAGACAAT----
gi|103850 : tt----------CAC-CTTAGTAAA--G-GATC----GACCCCTGTGGAAGCCCT-AAATTTGA-CAAAAGGA-GT-C-CAGAT-T-G-A-T-C-AAAT--T-TT-AT-ACAGGGCTA-CCA
gi|103851 : ----------CAC-CTGATCAAA--G-GATT----GACCCCTGTGGAAGCCCCTAAATTTGA-CAAAAGGA-GT-C-CAGAC-T-G-A-T-C-AAAT--T-TT-AT-ACAGGACTA-CCAGACAAT----
gi|103852 : ----------CAC-CTGATCAAA--G-GATT----GACCCCTGTGGAAGCCCCTAAATTTGA-CAAAAGGA-GT-C-CAGAC-T-G-A-T-C-AAAT--T-TT-AT-ACAGGACTA-CCAGACAAT----
gi|103853 : AAA--G----T----GACCCCTGTGGCAGCCCC-AAATTTGA-CCTCAGGG-AC-C-CAACT-T-C-A-A-C-AAAT--C-TT--T-AAGAAATAT-CCATGCAAT----GCTACATG---TAAAAT
Alignments
lowQualScore : 333333333333333333333 11111 222222222222222 11111 111111111111 11111111111111
lowQualScore : 5 5 2 666666666666666666666 3 2 0 0 0 0 0 22222 555 0 2 0 0 0 0 0 1111 111 222 0 1 44 0 333333333333333 0 99999999999 444444 11111 555555 2 8888888 22 1 444444444444 33333333333333 1 666666 2
lowQualScore : . . . ..................... . . . . . . . ..... ... . . . . . . . .... ... ... . . .. . ............... . ........... ...... ..... ...... . ....... .. . ............ .............. . ...... .
lowQualScore : 0 0 1 777777777777777777777 5 8 6 6 6 6 6 66666 666 6 3 6 6 6 6 5 2222 000 333 3 1 33 9 111111111111111 8 22222222222 666666 00000 888888 1 1111111 44 8 444444444444 11111111111111 1 888888 9
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATG------TAA---GT--A---TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
Reference ( family-363 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATG------TAA---G---A---TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATG------TAA---GTTGA---TCAC-CTGAGTAAAGGATTGACCCCTGTGGGAGCCAT-AAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAAATG---TAAAATATTA---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAATTGACATA
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCTATG------TAA---GTCGA---TCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACT-ACATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAATTGACATAcaacat
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCCATG------TAA---GTTTA---TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATGCATTG---------------TGCT-----------T--A---T-----A------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGATAcaacat
gi|103779 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCAT----------------------CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--A-G------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCAATG------TAA---GTTGA---TCAC-CTAAGTAAAGGATTGATCCCCGTGGAAGCCCT-AAATTTGACAA-AA-AGG-GCTC-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---G-----T------AACAT-TTTG--T----AAA--A-G------T-----TAACCTCTGTGTGAGCCCTTAATT--------------TCACCCCAGCA------ACCAGGTTTGAACAATCTTGATAAA-GATTAATCAACCAATTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC-------------------A---TCAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--A-G------T-----TAAACTCTGTGGAAGCCCTTA---------------------------A------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCCATG------TAA---GTCGA---TCAC-CTGAGTAAAGGATTGACCCCTCTGAAGGCCCT-AAAT----------------------------------CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACA-ACATACATTG---------------TGCT-----------T--G---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATG------TAAGCCG---A---TTAC-CTGAGTAAAGGATTGACTCCTGTGGAGGCCCT-AAATTTGACAA-AA-GTG-GT-C-TAGAT-T-G-A-T-CTAA---TT-TT-A------------------------TAC--------AAATATTC---AAACG-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------Tcaacat
gi|103784 : GAGGCCCCT---------A---A---A---TAACTCTATGTAAAACCATGACCCCTGTGGCGGCCCC-AAATTTGACTA-CA-AGG-AC-C-C-GACTT-C-A-A-CAATCC-TT-TT-AGGGGA-TCTCCATGCAA----TGTTACATG---TAAAATATCT---AAGGT-CTA--CAT-------------------CT-----------T--AAACT-----TCCGGAGAACATGTTTG-------AAA--C-G------T-----TAA
gi|103785 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatgATACATCT--TAAAAACAAGGGGCCCAAGTAGGCCTAA---G---ACACTCAT-CTGAGTAACAGATTGACATCTA-ACCAGGCTT-GAATTTTACCC-AATGGG----C-CAGACAT-G-A-A-GTAA-C-TT-GC-AACAGAGCAACCAGGTAATACCTGCTTCATACTCTAAACTTTTTGAGAAGAT-TTATT--TTA---------------TGTTC----------T--A---TCATTAT------AACAC-TATG--T-----TA--A-G------TG----TGACCTCTGTTGCAACTCCTTATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCTGGCTTGAACTATCCTGGGAGAGGACC-ACCAGCCAAT
gi|103786 : gAAACAAATGGGCC---------TAA---G---ACACTCGT-CTGAGTAAAAGAATGACCCCTGTGGATGTTCC-GCATTTGAGCCACA-AC--AC-C-CAG-C-T-C-A-A----ACT-TA-GT-ACAAGG-CCACCA----A----TAATAGATG---TAAAACATTT---AA--TACCGTGCATTG---------------TTCT-----------T--T---T-----T------GATA
gi|103787 : g---TTAC-CTGAGGAAAATATTGACTCCTGT------CCC-AAATTTGACCA-GA-GCG-TC-T-C-GAC-T-TGA-A-C-AATC-TTGCT-ACAGAG-TCATCACACAA----TAGTAAATG---TAAAA
gi|103788 : cgc---A---TCACTCTATGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-GC-C-CGTCT-T-C-A-A-CAAATC--T-TT-AGTGGA-CCCCCACGCAA----GATTCAATG---AAAAAT
gi|103789 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103790 : C-CTATGTAAAACAGTGACACCTGTGGCAGCCTT-AAATTTGACAC-CA-GAG-AC-C-CCAAC-T-TGA-A-CAAATA-TT-TA-AGGCGA-CCTTCATGCAA----TACAACATG----AAAAAATCT---AAGAT-CTGGACATT
gi|103791 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTTCATG---TAAAATAT
gi|103792 : C-CTATGTAAAACAGTGACCCCTGTGGCAGTCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTGCATG---TAAAATAT
gi|103793 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-GAATTTGACTC-CA--------C-CAGAC-T-TTA-A-CAAATC-TT-TT-AAGGAA-CATCCATTCAA----TGCTACATG---TAAGATAT
gi|103794 : -CTGTGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACAC-AA-GGG-AC-C-T-GACTT-T-A-A-CAAATC-TT-TT-AGGAGA-CCTCCAGGCAA----TGCTACAAG---CAAAAAAT
gi|103795 : TAAGTAAAAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAATAT
gi|103796 : CCCTGTGGTGGCCCC-GAAGTTGAAAT-CA-TGG-AC-C-CAGTT-T-G-A-C-CAAACA-TG-GT-AGAAGG-CCATTAGACAA----TGAAATATT---TAAAAAATCT---AAGCT-CCTGACATTG---------------AACT-----------TTCA---G-----A------AACAT-TTT---T----AA
gi|103797 : gagaaaaagattattagaG--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAAT
gi|103798 : G--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAAT
gi|103799 : G--T----AAA--A-G------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103800 : G--T----AAA--A-G------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103801 : GTAAAACGATGACCCCTGTGGCAGCCCC-AAACTTGACCT-AA-GGG-AC-C-CA-ACAT-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGGCCTTGAATTTGCAGAGAAAATGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--T-GTGCTTAT-----TAACC-CTGTGGTAG
gi|103802 : GTAAAA---TGACCCCTGTGGTGGCCCC-AAATTTGAACC-TA-GGG-AT-C-C-GACTT-C-A-A-CAAATC-TT-TT-ACAGGA-CCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGGT-CTA
gi|103803 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGTCCA-CA-GAA-AC-C-CAACT-T-C-A-A-C-AATA-TT-TT-ACAGGA-CCTCCATGCAA----TGTTACATG---TAAAATATCT---AA
gi|103804 : GTAAAACAGTGGCCCCTGTGGTGGCCCC-AAATTTGATCC-CA-GGG-AC-C-CGCCT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATACAA----TGCTATATG---TAAAATATCT---AAGAT-CTAGGTCTTG---------------AGCT-----------T--
gi|103805 : GTAAAACGGTGACCCCTGTGGCGGCCCT-AAATTTGGCCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAAATC-TT-TT-ACAGGA-CCCCCATGCAA----TGCTACATG---TTAAGT
gi|103806 : GTAAAAGAGTGACCCCTGTGGCGGCCCC-AAATTTGGCCC-CG-GGG-AG-C-C-GACTT-C-A-A-AAAATC-TT-TTAAGAGAA-CATCCATGCAA----TGCTACATG---TTAAATATCT---AAGAT-CTA
gi|103807 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C-GAC-TAC-A-C-AAAATC-TT-TA-AAGGGA-ACACCCTGCAA----TGCTACATG---TAAAATATCT---AA
gi|103808 : GTAAAACAGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGAGA-CCGCCATGCAA----TGCTACATG---TAATATATCT---AAGAT-CTA
gi|103809 : GTAAAACAGTGACCCTTGTGGTGGCCGC-AAATTTGACCT-CA-GAG-AC-C--AGAC-A-T-G-A-CAAGTC-TA-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAACGTATCT---AA
gi|103810 : GTAAAACAGTGACCC-TATGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-T-GAC-TTC-A-A-CAAAT--TT-TT-ATGGGA-CCTCCATGCAA----TGCTACATG---TTAAATATCT---AAGGT-CTAGGCCTTG---------------AACTTTCAGAGAAAAT--G---T-----T------AAAGT-TTTG--TTTA-AAA--A-G------TGCTTATAACTCCTGTGG
gi|103811 : GCAAAACAGTGACCCCTGTTGCGACCCT-CAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAAT--TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AA
gi|103812 : GTAAAACAGTGACCCTTGTGGCGATCTC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-TCTCCATGCAA----AGCTACATG---TAAAATATCT---AA
gi|103813 : GTAAAACATTGACCCCTGTGGTGGCCTC-AAATTTGACCC-AA-AGG-AC-C-CAACT-T-C-A-A-CAAACC-TT-TT-AGTGGA-CCCCAATGCAA----TGCTACACA---TAAAATATCT---a
gi|103814 : GTAAAACAGTTACCCCTGTGGCGGCCCC-GAACTTGACCC-CA-AGG-AC-C-CGATT-T-T-A-A-CAAATC-TT-TT-AGGGG--CCTCCAAGCAA----TGCTACATG---TAAAATATCT---AA-GT-GTAGGCATTGAACTTTCAGAGAAACTGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--A-T------TGCTTATAAGCCCTGTGGcaa
gi|103815 : GTAAAACAGTGGCCCCTGCGGCAGCCCC-AAATTTTACCC-CA-GTG-AC-C-CA-AC-T-T-C-A-CAAACCTTT-TT-AGGGGA-CCCCCATACAA----TGCTACATG---TAAAATAT
gi|103816 : GTAAAACAGTAATCGCTGTGGCAGCCCC-AAATTAGTCCA-CG-GGGTAC-C-T-GAC-T-TTA-A-CAACCT-TT-TT-AGTGGA-CCTCCATACAA----TGCTACATG---TAAAATATCT---AAGAT-CTA
gi|103817 : GTAAAACAATGACCCATGTGGCGGCCCT-AAATTTGACTC-TA-GGG-TC-T-C-GAC-TAT-A-A-CAAACC-TA-TT-AGGGGA-CCTCCATGCAA----TACTACAGG---TAAAATATCT---AAta
gi|103818 : GTAAAACAGTGACCCATGTGGCGGCCCC-AAATTTGACTC-TA-GGG-A--C-CAGACTT-C-A-C-CATATC-TT-TT-AGGGAA--CTCCATGCAA----TGATACATG---TACACTATCT---AAGGT-CTA
gi|103819 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103820 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103821 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATTCAT----TGCTACATG---GAAAATATCT---AA
gi|103822 : GTAAAACAGTGACCCCTGTGGTGACCCCCAAATTTGACCT-CA-GGG-AC-CTC--AC-T-T-ACA-CAAATC-TT-TT-AGGGGA-CCTCCACGCAA----TGCTACATA---TAAAATAT
gi|103823 : GTGAAACACTGACCCCTGTGGCGTCACC-AAATTTGATGC-CA-GGA-AC-C-T-GACTT-C-A-A-CAAATA-TT-TT-AGGGGA-CCTTCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGACCTT
gi|103824 : GTAAAACAGGGACCACTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-GAACTC-TT-T------AA-TC-CCATGCAA----TGCTTAATG---TAAAATATTT---AAAGT-CTATGCCTTGAACCA----------TGTT-----------T--T---T-----T------AAAGT-TTTGCTT----AAA--
gi|103825 : GTGAAACAATGACACCTGTGGCAACCCC-AAATTTTACCC-CA-GGG-AC-C-TGACC-T-C-A-A-CACATT-TT-TC-AGAGGA-TCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGTT-CTA
gi|103826 : GTAAAACAGTGATCCCTGTGGCGGCCCC-AAATTTGACCC-CA-AGG-AC-C-C-GACTT-C-A-A-CAAACC-TT-TT-AGGGTA-CCTCCATTCAA----TGCTTTATG---TAAAATATAT---AAGGT-CTA
gi|103827 : GTAAAACAGTGACCCCTTTGGCAACCCA-AAATTTGACCC-TT-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGCGA-CCTCCATGCAA----TGCTCCATG---TAAAATATCT---AAt
gi|103828 : GTGAAACAGTGACCCCTGTGACAGCCTC-AAATTTGACTC-CA-GGG-A--C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGAAA-CATCT-TTCAA----TGCTACATG---TAATATATCT---AAGGT-CTA
gi|103829 : AA--A-G------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATA
gi|103830 : tAAACGGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCAATGCAA----TGCTACATG---TAAAATAtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : tTAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGATATCT---AAGGT-CTACGCCTTG---------------AACT-----------T--
gi|103832 : TAAAACAGTGACCCATGTGGCAGCCCT-AAATTCGAACC-CA-GGG-AC-C-CATCT-T-C-A-G-CAAACC-TT-TA-AGGGGA-CCTCCATGCAT----TACTACATG---TAAAGTATCT---AAGGT-CTA
gi|103833 : TAAAACAGTGTCCGCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-CAGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103834 : TAAAACAGTGACCCATGTGGCGGTCCC-AAATTTGATCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CTTCCATGCAA----TGCTACATG---TCAA
gi|103835 : AGTGACCCCTTTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-T-C-GATGT-C-A-A-CAAATC-TG-TT-AGAGGA-CCCCTATGCAA----TGCAATATG---TAAAATATTT---AAGGT-CTA
gi|103836 : aaTGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CA--------------GGA-CCTCTATGCAA----TGCTATATG---C-ACATATCT---AAGGT-CTAGACCTT
gi|103837 : TGACCCCTGTGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-CAATT-T-C-A-A-C-AATC-TT-TT-AGGGAA-TCTCCATGCAA----TACTACATG----AAAATATCT---AAGGT-CTACACCTTG---------------AACT-----------T--
gi|103838 : TGACTCCTGTGGCGGCCCC-AAATTTGACAC-CA-GCG-AC-C-C-GAC-T---------------T-TT-AGGGGA-CCTCCATGCCA----TGCTACATG---TAAAATATCT---AAAGT-CTAAGCATTG---------------
gi|103839 : TGATCCCTGTGGCGGCCCA-AAATTTGACCC-CA-GTG-AC-C-TGACC-T-C-A-A-CAAATC-TT-TT-AGAGGA-CCTCCATGCAA----TGCTACATT---TAAAATAT
gi|103840 : TGACCCATGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-CCGAC-TTC-C-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGATACATG---TAGAACATTT---AAGGT-CTAGGCCTTG---------------AACT-----------T--
gi|103841 : TGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103842 : TGAGCTCTGTAGCAATCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATGCAA----TGTTACATG---TAAAATGT
gi|103843 : ACCCCTGTCGCGGCCCC-ATATTTGACAT-CA-GGA-AC-C-CAACC-T-C-A-A-CAAATC-GT-TA-AGGGGA-ACTCCATACAA----TGCTACATG---TAAAATATCT---
gi|103844 : CCTGTGGCAGCCCC-AAATTTTACCC-AA-GGG-AT-C-T-GAC-TTC-A-A-CAAATC-TT-TT-AGGGGG-TCTCCATGCAA----TGCTACATG---TAAAATGCCT---AAGGT-CTAGGCCTTG---------------CACT-----------T--ca
gi|103845 : -A-A-CAAACT-TG-AT-AGAG-A-CCATCAGCCAA----TGCTACATA---TAAAATATCTC--AAAGT-CTA------G---------------T---------------------T-----T------TACAG-TTTG--GGAGAAAA--A-GATTA--T-----TAGACCCTGTGGTGGCCCCGAAGT--------------TGAAATCATGG------ACCCAGTTTGACCAAACATGGTAGAAGGCC-ATTAGACAA-TGAAATA
gi|103846 : ttgCATTT---------------TCCC-----------T--A---TA----T------AGCTC-TTTG--T----AAAACA-G------------TGACCCCTGTGGCAGCCCCAAATT--------------TGACCTCAGGG------ATCC
gi|103846 : aGTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C
gi|103847 : acattttccctatatagctctttCATTT---------------TCCT-----------T--A---TA----T------AACTC-TATG--T----AAA--A-A------A-----TGACCCCTGTGGCAGCCCCAAATT--------------TGACCCCAGGG------ACC
gi|103847 : aGTAAAA-AATGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-
gi|103848 : acattttccttatataactctatCATTT---------------TCCC-----------T--A---TA----T------AAC---TATA--T----AAA--ACG------T-----TAACCTGTGTGGCAGCCCAAAATT--------------TAACCCCAGGG------ACCCGATTTCAACAA
gi|103848 : TAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGATctattttacaggacctccatgcaatatacatgtaagat
gi|103849 : cattttccctatataactata---A---TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----T
gi|103850 : ttCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCA
gi|103851 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103852 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103853 : AAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAAT
Alignments
lowQualScore : 22222 11111 222222222222222 11111111111 111111111111 11111111111111
lowQualScore : 5 5 2 33333 777777 4 0 2 0 0 0 0 0 22222 555 0 2 0 0 0 0 0 1111 111 222 0 1 44 1 555555555555555 00000000000 666666 888888888888 2 9999999 22 555555555555 44444444444444 777777 2
lowQualScore : . . . ..... ...... . . . . . . . . ..... ... . . . . . . . .... ... ... . . .. . ............... ........... ...... ............ . ....... .. ............ .............. ...... .
lowQualScore : 0 0 8 66666 222222 8 9 8 6 6 6 6 6 66666 666 6 3 6 6 6 6 5 2222 000 333 3 1 33 7 000000000000000 00000000000 111111 111111111111 4 7777777 66 555555555555 77777777777777 777777 9
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
Reference ( family-363 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTGA------TCAC-CTGAGTAAAGGATTGACCCCTGTGGGAGCCAT-AAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAAATG---TAAAATATTA---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAATTGACATA
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCTATGTAAG--TCGA------TCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACT-ACATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAATTGACATAcaacat
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTTA------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATGCATTG---------------TGCT-----------T--A---T-----A------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGATAcaacat
gi|103779 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCAT------------------CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCAATGTAAG--TTGA------TCAC-CTAAGTAAAGGATTGATCCCCGTGGAAGCCCT-AAATTTGACAA-AA-AGG-GCTC-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---G-----T------AACAT-TTTG--T----AAA--AG------T-----TAACCTCTGTGTGAGCCCTTAATT--------------TCACCCCAGCA------ACCAGGTTTGAACAATCTTGATAAA-GATTAATCAACCAATTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC------------A------TCAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTA---------------------------A------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCCATGTAAG--TCGA------TCAC-CTGAGTAAAGGATTGACCCCTCTGAAGGCCCT-AAAT----------------------------------CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACA-ACATACATTG---------------TGCT-----------T--G---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--CCGA------TTAC-CTGAGTAAAGGATTGACTCCTGTGGAGGCCCT-AAATTTGACAA-AA-GTG-GT-C-TAGAT-T-G-A-T-CTAA---TT-TT-A------------------------TAC--------AAATATTC---AAACG-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------Tcaacat
gi|103784 : GAGGCCCCT--AAA--T--A--------ACTCTATGTAAAACCATGACCCCTGTGGCGGCCCC-AAATTTGACTA-CA-AGG-AC-C-C-GACTT-C-A-A-CAATCC-TT-TT-AGGGGA-TCTCCATGCAA----TGTTACATG---TAAAATATCT---AAGGT-CTA--CAT-------------------CT-----------T--AAACT-----TCCGGAGAACATGTTTG-------AAA--CG------T-----TAA
gi|103785 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatgATACATCT--TAAAAACAAGGGGCCCAAGTAGGCCT--AAGACACTCAT-CTGAGTAACAGATTGACATCTA-ACCAGGCTT-GAATTTTACCC-AATGGG----C-CAGACAT-G-A-A-GTAA-C-TT-GC-AACAGAGCAACCAGGTAATACCTGCTTCATACTCTAAACTTTTTGAGAAGAT-TTATT--TTA---------------TGTTC----------T--A---TCATTAT------AACAC-TATG--T-----TA--AG------TG----TGACCTCTGTTGCAACTCCTTATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCTGGCTTGAACTATCCTGGGAGAGGACC-ACCAGCCAAT
gi|103786 : g------TCGT-CTGAGTAAAAGAATGACCCCTGTGGATGTTCC-GCATTTGAGCCACA-AC--AC-C-CAG-C-T-C-A-A----ACT-TA-GT-ACAAGG-CCACCA----A----TAATAGATG---TAAAACATTT---AA--TACCGTGCATTG---------------TTCT-----------T--T---T-----T------GATA
gi|103787 : gaaacaaatgggcctaagacac------TTAC-CTGAGGAAAATATTGACTCCTGT------CCC-AAATTTGACCA-GA-GCG-TC-T-C-GAC-T-TGA-A-C-AATC-TTGCT-ACAGAG-TCATCACACAA----TAGTAAATG---TAAAA
gi|103788 : cgc--A------TCACTCTATGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-GC-C-CGTCT-T-C-A-A-CAAATC--T-TT-AGTGGA-CCCCCACGCAA----GATTCAATG---AAAAAT
gi|103789 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103790 : C-CTATGTAAAACAGTGACACCTGTGGCAGCCTT-AAATTTGACAC-CA-GAG-AC-C-CCAAC-T-TGA-A-CAAATA-TT-TA-AGGCGA-CCTTCATGCAA----TACAACATG----AAAAAATCT---AAGAT-CTGGACATT
gi|103791 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTTCATG---TAAAATAT
gi|103792 : C-CTATGTAAAACAGTGACCCCTGTGGCAGTCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTGCATG---TAAAATAT
gi|103793 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-GAATTTGACTC-CA--------C-CAGAC-T-TTA-A-CAAATC-TT-TT-AAGGAA-CATCCATTCAA----TGCTACATG---TAAGATAT
gi|103794 : -CTGTGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACAC-AA-GGG-AC-C-T-GACTT-T-A-A-CAAATC-TT-TT-AGGAGA-CCTCCAGGCAA----TGCTACAAG---CAAAAAAT
gi|103795 : TAAGTAAAAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAATAT
gi|103796 : CCCTGTGGTGGCCCC-GAAGTTGAAAT-CA-TGG-AC-C-CAGTT-T-G-A-C-CAAACA-TG-GT-AGAAGG-CCATTAGACAA----TGAAATATT---TAAAAAATCT---AAGCT-CCTGACATTG---------------AACT-----------TTCA---G-----A------AACAT-TTT---T----AA
gi|103797 : gagaaaaagattattagaG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAAT
gi|103798 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAAT
gi|103799 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103800 : G--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103801 : GTAAAACGATGACCCCTGTGGCAGCCCC-AAACTTGACCT-AA-GGG-AC-C-CA-ACAT-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGGCCTTGAATTTGCAGAGAAAATGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--TGTGCTTAT-----TAACC-CTGTGGTAG
gi|103802 : GTAAAA---TGACCCCTGTGGTGGCCCC-AAATTTGAACC-TA-GGG-AT-C-C-GACTT-C-A-A-CAAATC-TT-TT-ACAGGA-CCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGGT-CTA
gi|103803 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGTCCA-CA-GAA-AC-C-CAACT-T-C-A-A-C-AATA-TT-TT-ACAGGA-CCTCCATGCAA----TGTTACATG---TAAAATATCT---AA
gi|103804 : GTAAAACAGTGGCCCCTGTGGTGGCCCC-AAATTTGATCC-CA-GGG-AC-C-CGCCT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATACAA----TGCTATATG---TAAAATATCT---AAGAT-CTAGGTCTTG---------------AGCT-----------T--
gi|103805 : GTAAAACGGTGACCCCTGTGGCGGCCCT-AAATTTGGCCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAAATC-TT-TT-ACAGGA-CCCCCATGCAA----TGCTACATG---TTAAGT
gi|103806 : GTAAAAGAGTGACCCCTGTGGCGGCCCC-AAATTTGGCCC-CG-GGG-AG-C-C-GACTT-C-A-A-AAAATC-TT-TTAAGAGAA-CATCCATGCAA----TGCTACATG---TTAAATATCT---AAGAT-CTA
gi|103807 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C-GAC-TAC-A-C-AAAATC-TT-TA-AAGGGA-ACACCCTGCAA----TGCTACATG---TAAAATATCT---AA
gi|103808 : GTAAAACAGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGAGA-CCGCCATGCAA----TGCTACATG---TAATATATCT---AAGAT-CTA
gi|103809 : GTAAAACAGTGACCCTTGTGGTGGCCGC-AAATTTGACCT-CA-GAG-AC-C--AGAC-A-T-G-A-CAAGTC-TA-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAACGTATCT---AA
gi|103810 : GTAAAACAGTGACCC-TATGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-T-GAC-TTC-A-A-CAAAT--TT-TT-ATGGGA-CCTCCATGCAA----TGCTACATG---TTAAATATCT---AAGGT-CTAGGCCTTG---------------AACTTTCAGAGAAAAT--G---T-----T------AAAGT-TTTG--TTTA-AAA--AG------TGCTTATAACTCCTGTGG
gi|103811 : GCAAAACAGTGACCCCTGTTGCGACCCT-CAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAAT--TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AA
gi|103812 : GTAAAACAGTGACCCTTGTGGCGATCTC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-TCTCCATGCAA----AGCTACATG---TAAAATATCT---AA
gi|103813 : GTAAAACATTGACCCCTGTGGTGGCCTC-AAATTTGACCC-AA-AGG-AC-C-CAACT-T-C-A-A-CAAACC-TT-TT-AGTGGA-CCCCAATGCAA----TGCTACACA---TAAAATATCT---a
gi|103814 : GTAAAACAGTTACCCCTGTGGCGGCCCC-GAACTTGACCC-CA-AGG-AC-C-CGATT-T-T-A-A-CAAATC-TT-TT-AGGGG--CCTCCAAGCAA----TGCTACATG---TAAAATATCT---AA-GT-GTAGGCATTGAACTTTCAGAGAAACTGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--AT------TGCTTATAAGCCCTGTGGcaa
gi|103815 : GTAAAACAGTGGCCCCTGCGGCAGCCCC-AAATTTTACCC-CA-GTG-AC-C-CA-AC-T-T-C-A-CAAACCTTT-TT-AGGGGA-CCCCCATACAA----TGCTACATG---TAAAATAT
gi|103816 : GTAAAACAGTAATCGCTGTGGCAGCCCC-AAATTAGTCCA-CG-GGGTAC-C-T-GAC-T-TTA-A-CAACCT-TT-TT-AGTGGA-CCTCCATACAA----TGCTACATG---TAAAATATCT---AAGAT-CTA
gi|103817 : GTAAAACAATGACCCATGTGGCGGCCCT-AAATTTGACTC-TA-GGG-TC-T-C-GAC-TAT-A-A-CAAACC-TA-TT-AGGGGA-CCTCCATGCAA----TACTACAGG---TAAAATATCT---AAta
gi|103818 : GTAAAACAGTGACCCATGTGGCGGCCCC-AAATTTGACTC-TA-GGG-A--C-CAGACTT-C-A-C-CATATC-TT-TT-AGGGAA--CTCCATGCAA----TGATACATG---TACACTATCT---AAGGT-CTA
gi|103819 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103820 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103821 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATTCAT----TGCTACATG---GAAAATATCT---AA
gi|103822 : GTAAAACAGTGACCCCTGTGGTGACCCCCAAATTTGACCT-CA-GGG-AC-CTC--AC-T-T-ACA-CAAATC-TT-TT-AGGGGA-CCTCCACGCAA----TGCTACATA---TAAAATAT
gi|103823 : GTGAAACACTGACCCCTGTGGCGTCACC-AAATTTGATGC-CA-GGA-AC-C-T-GACTT-C-A-A-CAAATA-TT-TT-AGGGGA-CCTTCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGACCTT
gi|103824 : GTAAAACAGGGACCACTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-GAACTC-TT-T------AA-TC-CCATGCAA----TGCTTAATG---TAAAATATTT---AAAGT-CTATGCCTTGAACCA----------TGTT-----------T--T---T-----T------AAAGT-TTTGCTT----AAA--
gi|103825 : GTGAAACAATGACACCTGTGGCAACCCC-AAATTTTACCC-CA-GGG-AC-C-TGACC-T-C-A-A-CACATT-TT-TC-AGAGGA-TCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGTT-CTA
gi|103826 : GTAAAACAGTGATCCCTGTGGCGGCCCC-AAATTTGACCC-CA-AGG-AC-C-C-GACTT-C-A-A-CAAACC-TT-TT-AGGGTA-CCTCCATTCAA----TGCTTTATG---TAAAATATAT---AAGGT-CTA
gi|103827 : GTAAAACAGTGACCCCTTTGGCAACCCA-AAATTTGACCC-TT-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGCGA-CCTCCATGCAA----TGCTCCATG---TAAAATATCT---AAt
gi|103828 : GTGAAACAGTGACCCCTGTGACAGCCTC-AAATTTGACTC-CA-GGG-A--C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGAAA-CATCT-TTCAA----TGCTACATG---TAATATATCT---AAGGT-CTA
gi|103829 : AA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATA
gi|103830 : tAAACGGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCAATGCAA----TGCTACATG---TAAAATAtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : tTAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGATATCT---AAGGT-CTACGCCTTG---------------AACT-----------T--
gi|103832 : TAAAACAGTGACCCATGTGGCAGCCCT-AAATTCGAACC-CA-GGG-AC-C-CATCT-T-C-A-G-CAAACC-TT-TA-AGGGGA-CCTCCATGCAT----TACTACATG---TAAAGTATCT---AAGGT-CTA
gi|103833 : TAAAACAGTGTCCGCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-CAGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103834 : TAAAACAGTGACCCATGTGGCGGTCCC-AAATTTGATCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CTTCCATGCAA----TGCTACATG---TCAA
gi|103835 : AGTGACCCCTTTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-T-C-GATGT-C-A-A-CAAATC-TG-TT-AGAGGA-CCCCTATGCAA----TGCAATATG---TAAAATATTT---AAGGT-CTA
gi|103836 : aaTGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CA--------------GGA-CCTCTATGCAA----TGCTATATG---C-ACATATCT---AAGGT-CTAGACCTT
gi|103837 : TGACCCCTGTGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-CAATT-T-C-A-A-C-AATC-TT-TT-AGGGAA-TCTCCATGCAA----TACTACATG----AAAATATCT---AAGGT-CTACACCTTG---------------AACT-----------T--
gi|103838 : TGACTCCTGTGGCGGCCCC-AAATTTGACAC-CA-GCG-AC-C-C-GAC-T---------------T-TT-AGGGGA-CCTCCATGCCA----TGCTACATG---TAAAATATCT---AAAGT-CTAAGCATTG---------------
gi|103839 : TGATCCCTGTGGCGGCCCA-AAATTTGACCC-CA-GTG-AC-C-TGACC-T-C-A-A-CAAATC-TT-TT-AGAGGA-CCTCCATGCAA----TGCTACATT---TAAAATAT
gi|103840 : TGACCCATGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-CCGAC-TTC-C-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGATACATG---TAGAACATTT---AAGGT-CTAGGCCTTG---------------AACT-----------T--
gi|103841 : TGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103842 : TGAGCTCTGTAGCAATCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATGCAA----TGTTACATG---TAAAATGT
gi|103843 : ACCCCTGTCGCGGCCCC-ATATTTGACAT-CA-GGA-AC-C-CAACC-T-C-A-A-CAAATC-GT-TA-AGGGGA-ACTCCATACAA----TGCTACATG---TAAAATATCT---
gi|103844 : CCTGTGGCAGCCCC-AAATTTTACCC-AA-GGG-AT-C-T-GAC-TTC-A-A-CAAATC-TT-TT-AGGGGG-TCTCCATGCAA----TGCTACATG---TAAAATGCCT---AAGGT-CTAGGCCTTG---------------CACT-----------T--ca
gi|103845 : -A-A-CAAACT-TG-AT-AGAG-A-CCATCAGCCAA----TGCTACATA---TAAAATATCTC--AAAGT-CTA------G---------------T---------------------T-----T------TACAG-TTTG--GGAGAAAA--AGATTA--T-----TAGACCCTGTGGTGGCCCCGAAGT--------------TGAAATCATGG------ACCCAGTTTGACCAAACATGGTAGAAGGCC-ATTAGACAA-TGAAATA
gi|103846 : ttgCATTT---------------TCCC-----------T--A---TA----T------AGCTC-TTTG--T----AAAACAG------------TGACCCCTGTGGCAGCCCCAAATT--------------TGACCTCAGGG------ATCC
gi|103846 : aGTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C
gi|103847 : acattttccctatatagctcttt--T--A------TAACTCTATGTAAAA-AATGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-
gi|103848 : acattttccttaCCTATATAAC--T--A------T--------ATAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGAT
gi|103849 : cattttc--T--A------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----T
gi|103850 : tCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCA
gi|103851 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103852 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103853 : AAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAAT
Alignments
lowQualScore : 22222 11111 222222222222222 11111111111 111111111111 11111111111111
lowQualScore : 5 5 2 33333 777777 4 0 2 0 0 0 0 0 22222 555 0 2 0 0 0 0 0 1111 111 222 0 1 44 1 555555555555555 00000000000 666666 888888888888 2 9999999 22 555555555555 44444444444444 777777 2
lowQualScore : . . . ..... ...... . . . . . . . . ..... ... . . . . . . . .... ... ... . . .. . ............... ........... ...... ............ . ....... .. ............ .............. ...... .
lowQualScore : 0 0 8 66666 222222 8 9 8 6 6 6 6 6 66666 666 6 3 6 6 6 6 5 2222 000 333 3 1 33 7 000000000000000 00000000000 111111 111111111111 4 7777777 66 555555555555 77777777777777 777777 9
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
Reference ( family-363 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTGA------TCAC-CTGAGTAAAGGATTGACCCCTGTGGGAGCCAT-AAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAAATG---TAAAATATTA---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAATTGACATA
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCTATGTAAG--TCGA------TCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACT-ACATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAATTGACATAcaacat
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTTA------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATGCATTG---------------TGCT-----------T--A---T-----A------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGATAcaacat
gi|103779 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCAT------------------CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCAATGTAAG--TTGA------TCAC-CTAAGTAAAGGATTGATCCCCGTGGAAGCCCT-AAATTTGACAA-AA-AGG-GCTC-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---G-----T------AACAT-TTTG--T----AAA--AG------T-----TAACCTCTGTGTGAGCCCTTAATT--------------TCACCCCAGCA------ACCAGGTTTGAACAATCTTGATAAA-GATTAATCAACCAATTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC------------A------TCAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTA---------------------------A------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCCATGTAAG--TCGA------TCAC-CTGAGTAAAGGATTGACCCCTCTGAAGGCCCT-AAAT----------------------------------CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACA-ACATACATTG---------------TGCT-----------T--G---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--CCGA------TTAC-CTGAGTAAAGGATTGACTCCTGTGGAGGCCCT-AAATTTGACAA-AA-GTG-GT-C-TAGAT-T-G-A-T-CTAA---TT-TT-A------------------------TAC--------AAATATTC---AAACG-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------Tcaacat
gi|103784 : GAGGCCCCT--AAA--T--A--------ACTCTATGTAAAACCATGACCCCTGTGGCGGCCCC-AAATTTGACTA-CA-AGG-AC-C-C-GACTT-C-A-A-CAATCC-TT-TT-AGGGGA-TCTCCATGCAA----TGTTACATG---TAAAATATCT---AAGGT-CTA--CAT-------------------CT-----------T--AAACT-----TCCGGAGAACATGTTTG-------AAA--CG------T-----TAA
gi|103785 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatgATACATCT--TAAAAACAAGGGGCCCAAGTAGGCCT--AAGACACTCAT-CTGAGTAACAGATTGACATCTA-ACCAGGCTT-GAATTTTACCC-AATGGG----C-CAGACAT-G-A-A-GTAA-C-TT-GC-AACAGAGCAACCAGGTAATACCTGCTTCATACTCTAAACTTTTTGAGAAGAT-TTATT--TTA---------------TGTTC----------T--A---TCATTAT------AACAC-TATG--T-----TA--AG------TG----TGACCTCTGTTGCAACTCCTTATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCTGGCTTGAACTATCCTGGGAGAGGACC-ACCAGCCAAT
gi|103786 : g------TCGT-CTGAGTAAAAGAATGACCCCTGTGGATGTTCC-GCATTTGAGCCACA-AC--AC-C-CAG-C-T-C-A-A----ACT-TA-GT-ACAAGG-CCACCA----A----TAATAGATG---TAAAACATTT---AA--TACCGTGCATTG---------------TTCT-----------T--T---T-----T------GATA
gi|103787 : gaaacaaatgggcctaagacac------TTAC-CTGAGGAAAATATTGACTCCTGT------CCC-AAATTTGACCA-GA-GCG-TC-T-C-GAC-T-TGA-A-C-AATC-TTGCT-ACAGAG-TCATCACACAA----TAGTAAATG---TAAAA
gi|103788 : cgc--A------TCACTCTATGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-GC-C-CGTCT-T-C-A-A-CAAATC--T-TT-AGTGGA-CCCCCACGCAA----GATTCAATG---AAAAAT
gi|103789 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103790 : C-CTATGTAAAACAGTGACACCTGTGGCAGCCTT-AAATTTGACAC-CA-GAG-AC-C-CCAAC-T-TGA-A-CAAATA-TT-TA-AGGCGA-CCTTCATGCAA----TACAACATG----AAAAAATCT---AAGAT-CTGGACATT
gi|103791 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTTCATG---TAAAATAT
gi|103792 : C-CTATGTAAAACAGTGACCCCTGTGGCAGTCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTGCATG---TAAAATAT
gi|103793 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-GAATTTGACTC-CA--------C-CAGAC-T-TTA-A-CAAATC-TT-TT-AAGGAA-CATCCATTCAA----TGCTACATG---TAAGATAT
gi|103794 : -CTGTGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACAC-AA-GGG-AC-C-T-GACTT-T-A-A-CAAATC-TT-TT-AGGAGA-CCTCCAGGCAA----TGCTACAAG---CAAAAAAT
gi|103795 : TAAGTAAAAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAATAT
gi|103796 : CCCTGTGGTGGCCCC-GAAGTTGAAAT-CA-TGG-AC-C-CAGTT-T-G-A-C-CAAACA-TG-GT-AGAAGG-CCATTAGACAA----TGAAATATT---TAAAAAATCT---AAGCT-CCTGACATTG---------------AACT-----------TTCA---G-----A------AACAT-TTT---T----AA
gi|103797 : gagaaaaagattattagaG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAAT
gi|103798 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAAT
gi|103799 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103800 : G--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103801 : GTAAAACGATGACCCCTGTGGCAGCCCC-AAACTTGACCT-AA-GGG-AC-C-CA-ACAT-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGGCCTTGAATTTGCAGAGAAAATGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--TGTGCTTAT-----TAACC-CTGTGGTAG
gi|103802 : GTAAAA---TGACCCCTGTGGTGGCCCC-AAATTTGAACC-TA-GGG-AT-C-C-GACTT-C-A-A-CAAATC-TT-TT-ACAGGA-CCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGGT-CTA
gi|103803 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGTCCA-CA-GAA-AC-C-CAACT-T-C-A-A-C-AATA-TT-TT-ACAGGA-CCTCCATGCAA----TGTTACATG---TAAAATATCT---AA
gi|103804 : GTAAAACAGTGGCCCCTGTGGTGGCCCC-AAATTTGATCC-CA-GGG-AC-C-CGCCT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATACAA----TGCTATATG---TAAAATATCT---AAGAT-CTAGGTCTTG---------------AGCT-----------T--
gi|103805 : GTAAAACGGTGACCCCTGTGGCGGCCCT-AAATTTGGCCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAAATC-TT-TT-ACAGGA-CCCCCATGCAA----TGCTACATG---TTAAGT
gi|103806 : GTAAAAGAGTGACCCCTGTGGCGGCCCC-AAATTTGGCCC-CG-GGG-AG-C-C-GACTT-C-A-A-AAAATC-TT-TTAAGAGAA-CATCCATGCAA----TGCTACATG---TTAAATATCT---AAGAT-CTA
gi|103807 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C-GAC-TAC-A-C-AAAATC-TT-TA-AAGGGA-ACACCCTGCAA----TGCTACATG---TAAAATATCT---AA
gi|103808 : GTAAAACAGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGAGA-CCGCCATGCAA----TGCTACATG---TAATATATCT---AAGAT-CTA
gi|103809 : GTAAAACAGTGACCCTTGTGGTGGCCGC-AAATTTGACCT-CA-GAG-AC-C--AGAC-A-T-G-A-CAAGTC-TA-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAACGTATCT---AA
gi|103810 : GTAAAACAGTGACCC-TATGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-T-GAC-TTC-A-A-CAAAT--TT-TT-ATGGGA-CCTCCATGCAA----TGCTACATG---TTAAATATCT---AAGGT-CTAGGCCTTG---------------AACTTTCAGAGAAAAT--G---T-----T------AAAGT-TTTG--TTTA-AAA--AG------TGCTTATAACTCCTGTGG
gi|103811 : GCAAAACAGTGACCCCTGTTGCGACCCT-CAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAAT--TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AA
gi|103812 : GTAAAACAGTGACCCTTGTGGCGATCTC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-TCTCCATGCAA----AGCTACATG---TAAAATATCT---AA
gi|103813 : GTAAAACATTGACCCCTGTGGTGGCCTC-AAATTTGACCC-AA-AGG-AC-C-CAACT-T-C-A-A-CAAACC-TT-TT-AGTGGA-CCCCAATGCAA----TGCTACACA---TAAAATATCT---a
gi|103814 : GTAAAACAGTTACCCCTGTGGCGGCCCC-GAACTTGACCC-CA-AGG-AC-C-CGATT-T-T-A-A-CAAATC-TT-TT-AGGGG--CCTCCAAGCAA----TGCTACATG---TAAAATATCT---AA-GT-GTAGGCATTGAACTTTCAGAGAAACTGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--AT------TGCTTATAAGCCCTGTGGcaa
gi|103815 : GTAAAACAGTGGCCCCTGCGGCAGCCCC-AAATTTTACCC-CA-GTG-AC-C-CA-AC-T-T-C-A-CAAACCTTT-TT-AGGGGA-CCCCCATACAA----TGCTACATG---TAAAATAT
gi|103816 : GTAAAACAGTAATCGCTGTGGCAGCCCC-AAATTAGTCCA-CG-GGGTAC-C-T-GAC-T-TTA-A-CAACCT-TT-TT-AGTGGA-CCTCCATACAA----TGCTACATG---TAAAATATCT---AAGAT-CTA
gi|103817 : GTAAAACAATGACCCATGTGGCGGCCCT-AAATTTGACTC-TA-GGG-TC-T-C-GAC-TAT-A-A-CAAACC-TA-TT-AGGGGA-CCTCCATGCAA----TACTACAGG---TAAAATATCT---AAta
gi|103818 : GTAAAACAGTGACCCATGTGGCGGCCCC-AAATTTGACTC-TA-GGG-A--C-CAGACTT-C-A-C-CATATC-TT-TT-AGGGAA--CTCCATGCAA----TGATACATG---TACACTATCT---AAGGT-CTA
gi|103819 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103820 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103821 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATTCAT----TGCTACATG---GAAAATATCT---AA
gi|103822 : GTAAAACAGTGACCCCTGTGGTGACCCCCAAATTTGACCT-CA-GGG-AC-CTC--AC-T-T-ACA-CAAATC-TT-TT-AGGGGA-CCTCCACGCAA----TGCTACATA---TAAAATAT
gi|103823 : GTGAAACACTGACCCCTGTGGCGTCACC-AAATTTGATGC-CA-GGA-AC-C-T-GACTT-C-A-A-CAAATA-TT-TT-AGGGGA-CCTTCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGACCTT
gi|103824 : GTAAAACAGGGACCACTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-GAACTC-TT-T------AA-TC-CCATGCAA----TGCTTAATG---TAAAATATTT---AAAGT-CTATGCCTTGAACCA----------TGTT-----------T--T---T-----T------AAAGT-TTTGCTT----AAA--
gi|103825 : GTGAAACAATGACACCTGTGGCAACCCC-AAATTTTACCC-CA-GGG-AC-C-TGACC-T-C-A-A-CACATT-TT-TC-AGAGGA-TCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGTT-CTA
gi|103826 : GTAAAACAGTGATCCCTGTGGCGGCCCC-AAATTTGACCC-CA-AGG-AC-C-C-GACTT-C-A-A-CAAACC-TT-TT-AGGGTA-CCTCCATTCAA----TGCTTTATG---TAAAATATAT---AAGGT-CTA
gi|103827 : GTAAAACAGTGACCCCTTTGGCAACCCA-AAATTTGACCC-TT-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGCGA-CCTCCATGCAA----TGCTCCATG---TAAAATATCT---AAt
gi|103828 : GTGAAACAGTGACCCCTGTGACAGCCTC-AAATTTGACTC-CA-GGG-A--C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGAAA-CATCT-TTCAA----TGCTACATG---TAATATATCT---AAGGT-CTA
gi|103829 : AA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATA
gi|103830 : tAAACGGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCAATGCAA----TGCTACATG---TAAAATAtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : tTAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGATATCT---AAGGT-CTACGCCTTG---------------AACT-----------T--
gi|103832 : TAAAACAGTGACCCATGTGGCAGCCCT-AAATTCGAACC-CA-GGG-AC-C-CATCT-T-C-A-G-CAAACC-TT-TA-AGGGGA-CCTCCATGCAT----TACTACATG---TAAAGTATCT---AAGGT-CTA
gi|103833 : TAAAACAGTGTCCGCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-CAGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103834 : TAAAACAGTGACCCATGTGGCGGTCCC-AAATTTGATCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CTTCCATGCAA----TGCTACATG---TCAA
gi|103835 : AGTGACCCCTTTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-T-C-GATGT-C-A-A-CAAATC-TG-TT-AGAGGA-CCCCTATGCAA----TGCAATATG---TAAAATATTT---AAGGT-CTA
gi|103836 : aaTGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CA--------------GGA-CCTCTATGCAA----TGCTATATG---C-ACATATCT---AAGGT-CTAGACCTT
gi|103837 : TGACCCCTGTGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-CAATT-T-C-A-A-C-AATC-TT-TT-AGGGAA-TCTCCATGCAA----TACTACATG----AAAATATCT---AAGGT-CTACACCTTG---------------AACT-----------T--
gi|103838 : TGACTCCTGTGGCGGCCCC-AAATTTGACAC-CA-GCG-AC-C-C-GAC-T---------------T-TT-AGGGGA-CCTCCATGCCA----TGCTACATG---TAAAATATCT---AAAGT-CTAAGCATTG---------------
gi|103839 : TGATCCCTGTGGCGGCCCA-AAATTTGACCC-CA-GTG-AC-C-TGACC-T-C-A-A-CAAATC-TT-TT-AGAGGA-CCTCCATGCAA----TGCTACATT---TAAAATAT
gi|103840 : TGACCCATGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-CCGAC-TTC-C-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGATACATG---TAGAACATTT---AAGGT-CTAGGCCTTG---------------AACT-----------T--
gi|103841 : TGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103842 : TGAGCTCTGTAGCAATCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATGCAA----TGTTACATG---TAAAATGT
gi|103843 : ACCCCTGTCGCGGCCCC-ATATTTGACAT-CA-GGA-AC-C-CAACC-T-C-A-A-CAAATC-GT-TA-AGGGGA-ACTCCATACAA----TGCTACATG---TAAAATATCT---
gi|103844 : CCTGTGGCAGCCCC-AAATTTTACCC-AA-GGG-AT-C-T-GAC-TTC-A-A-CAAATC-TT-TT-AGGGGG-TCTCCATGCAA----TGCTACATG---TAAAATGCCT---AAGGT-CTAGGCCTTG---------------CACT-----------T--ca
gi|103845 : -A-A-CAAACT-TG-AT-AGAG-A-CCATCAGCCAA----TGCTACATA---TAAAATATCTC--AAAGT-CTA------G---------------T---------------------T-----T------TACAG-TTTG--GGAGAAAA--AGATTA--T-----TAGACCCTGTGGTGGCCCCGAAGT--------------TGAAATCATGG------ACCCAGTTTGACCAAACATGGTAGAAGGCC-ATTAGACAA-TGAAATA
gi|103846 : ttgCATTT---------------TCCC-----------T--A---TA----T------AGCTC-TTTG--T----AAAACAG------------TGACCCCTGTGGCAGCCCCAAATT--------------TGACCTCAGGG------ATCC
gi|103846 : aGTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C
gi|103847 : acattttccctatatagctcttt--T--A------TAACTCTATGTAAAA-AATGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-
gi|103848 : acattttccttaCCTATATAAC--T--A------T--------ATAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGAT
gi|103849 : cattttc--T--A------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----T
gi|103850 : tCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCA
gi|103851 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103852 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103853 : AAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAAT
blockSeqs : A T G TCG AGACAC T T AGACA TG A TACC CTC GAG A TA A AATTTGCAGAGAAAA TTCAGAGAAAA AAAC TCCGGAG G GGAGA AC TGCTTAT CCCCCCCCCCCCCC CCGGAT A
blockSeqs : . . G TTT . T T AGACT TG A . . C . TG A AACTTTCAGAGAAAC C TCA CATTAT . TTTA . TGCTTA . . .
blockSeqs : . . G TTG . T C AGAT TA A . . . . TA A AACCA . A AT . CTT . TGCTTA . . .
blockSeqs : . . G TCG . . T AGAT TT A . . . . TA A . . A T . CTT . ATTAT . . .
blockSeqs : . . G CCG . . T AGAC AC . . . . . TA A . . A A . CTT . TG . . .
blockSeqs : . . G CCT . . . AGAT TC . . . . . TA A . . A T . T . T . . .
blockSeqs : . . A T . . . AGAC TT . . . . . TA A . . A T . T . T . . .
blockSeqs : . T . . . AGAT AT . . . . . TT A . . G T . T . T . . .
blockSeqs : . T . . . GACT TA . . . . . TG A . . A T . T . T . . .
blockSeqs : . T . . . GTCT TC . . . . . GA A . . A T . T . T . . .
blockSeqs : . . . . AGAC TC . . . . . GA A . . T T . T . T . . .
blockSeqs : . . . . CAAC G . . . . . GG C . . T A . T . T . . .
blockSeqs : . . . AGAC G . . . . . GG C . . G T . T . T . . .
blockSeqs : . . . AGAC G . . . . . GG C . . T T . T . T . .
blockSeqs : . . . AGAC G . . . . . GG A . . T T . T . T .
blockSeqs : . . GACT G . . . . . GA C . . A T . T . T
blockSeqs : . . AACT G . . . . . TG C . . . T T . T
blockSeqs : . . AGTT C . . . . . CG C . . T . T
blockSeqs : . . AACA G . . . . . GA C . . T . .
blockSeqs : . . GACT C . . . . . CA C . . . .
blockSeqs : . . AACT C . . . . . AG A . .
blockSeqs : . . GCCT T . . . . . GG C . .
blockSeqs : . . GATT T . . . . . GG C .
blockSeqs : . . GACT T . . . . . . A
blockSeqs : . GACT C . . . . . . .
blockSeqs : . AGAC G . . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . AACT C . . . . .
blockSeqs : . GATT C . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . GACT T . . . . .
blockSeqs : . GACT C . . . . .
blockSeqs : . GACC C . . . .
blockSeqs : . GACT C . . . .
blockSeqs : . AACT T . . . .
blockSeqs : . AGAC T . . . .
blockSeqs : . AACT C . . . .
blockSeqs : . GATT C . . . .
blockSeqs : . ATCT C . . . .
blockSeqs : . AGAC C . . . .
blockSeqs : . GACT T . . . .
blockSeqs : . GATG C . . . .
blockSeqs : . GACT C . . . .
blockSeqs : . AATT C . . . .
blockSeqs : . GACC C . . .
blockSeqs : . CGAC C . . .
blockSeqs : . AGAC C . . .
blockSeqs : . AACT C . . .
blockSeqs : . AACC C . . .
blockSeqs : . GATT T . . .
blockSeqs : . AGAT C . . .
blockSeqs : . AGAT C . . .
blockSeqs : . AGAC C . . .
blockSeqs : . AGAC C . . .
blockSeqs : . AACT C . . .
blockSeqs : . AGC T . . .
blockSeqs : . GAC C . . .
blockSeqs : . GAC C . . .
blockSeqs : . GAC C . . .
blockSeqs : . AAC G . . .
blockSeqs : . GAC G . . .
blockSeqs : . GAC G . . .
blockSeqs : . GAC G . . .
blockSeqs : . GAC C . .
blockSeqs : . AC . . .
blockSeqs : . . . . .
blockSeqs : . .
blockSeqs : .
blockSeqCons :
originalCons : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
finalCons : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
Alignments
lowQualScore : 22222 11111 222222222222222 11111111111 111111111111 11111111111111
lowQualScore : 5 5 2 33333 777777 4 0 2 0 0 0 0 0 22222 555 0 2 0 0 0 0 0 1111 111 222 0 1 44 1 555555555555555 00000000000 666666 888888888888 2 9999999 22 555555555555 44444444444444 777777 2
lowQualScore : . . . ..... ...... . . . . . . . . ..... ... . . . . . . . .... ... ... . . .. . ............... ........... ...... ............ . ....... .. ............ .............. ...... .
lowQualScore : 0 0 8 66666 222222 8 9 8 6 6 6 6 6 66666 666 6 3 6 6 6 6 5 2222 000 333 3 1 33 7 000000000000000 00000000000 111111 111111111111 4 7777777 66 555555555555 77777777777777 777777 9
consensus : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
Reference ( family-363 ) : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--T--A------TCAC-CTGAGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAGAC-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTANGCATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103776 : ATTTCTAACTAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTGA------TCAC-CTGAGTAAAGGATTGACCCCTGTGGGAGCCAT-AAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAAATG---TAAAATATTA---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAATTGACATA
gi|103777 : ATTTATAACGAAATTAATTCATGAACACTAAAAATTTATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAAGAAGAAGCCTATGTAAG--TCGA------TCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACT-ACATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAATTGACATAcaacat
gi|103778 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATAAAAA-CTTTAA-ATATGTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--TTTA------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATGCATTG---------------TGCT-----------T--A---T-----A------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGATAcaacat
gi|103779 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCCAT------------------CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAatatacaaca
gi|103780 : ATTTCTAACGAAATTATTTCATGAACACTAAAAATTGATGAAAATACAAAACTTATATATATTGATACATTTGTTTTAAATAAGAAACCAATGTAAG--TTGA------TCAC-CTAAGTAAAGGATTGATCCCCGTGGAAGCCCT-AAATTTGACAA-AA-AGG-GCTC-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---G-----T------AACAT-TTTG--T----AAA--AG------T-----TAACCTCTGTGTGAGCCCTTAATT--------------TCACCCCAGCA------ACCAGGTTTGAACAATCTTGATAAA-GATTAATCAACCAATTGACATA
gi|103781 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATTCATTTGTTTTAAACAAGAAGCCC------------A------TCAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----TACTAGATG---TAAAATATTC---AAACT-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----TAA--AG------T-----TAAACTCTGTGGAAGCCCTTA---------------------------A------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATAcaacat
gi|103782 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTAGTATTAAACAAGAAGCCCATGTAAG--TCGA------TCAC-CTGAGTAAAGGATTGACCCCTCTGAAGGCCCT-AAAT----------------------------------CAAATT-TT-AT-ACAGGG-CTACCAGAAAA----TACTAGATG---TAAAATATTC---AAACA-ACATACATTG---------------TGCT-----------T--G---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAATTGACATA
gi|103783 : ATTTCTAACGAAATTAATTCATGAACACTAAAAATTGATGAAAATACAAA-CTTGAA-ATATTTATACATTTGTTTTAAACAAGAAGCCCATGTAAG--CCGA------TTAC-CTGAGTAAAGGATTGACTCCTGTGGAGGCCCT-AAATTTGACAA-AA-GTG-GT-C-TAGAT-T-G-A-T-CTAA---TT-TT-A------------------------TAC--------AAATATTC---AAACG-CCATACATTG---------------TGCT-----------T--A---T-----T------AACAC-TTTG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------Tcaacat
gi|103784 : GAGGCCCCT--AAA--T--A--------ACTCTATGTAAAACCATGACCCCTGTGGCGGCCCC-AAATTTGACTA-CA-AGG-AC-C-C-GACTT-C-A-A-CAATCC-TT-TT-AGGGGA-TCTCCATGCAA----TGTTACATG---TAAAATATCT---AAGGT-CTA--CAT-------------------CT-----------T--AAACT-----TCCGGAGAACATGTTTG-------AAA--CG------T-----TAA
gi|103785 : tggaatgaattgcgtacatctttgaggttgaaacccaataaatcatatgATACATCT--TAAAAACAAGGGGCCCAAGTAGGCCT--AAGACACTCAT-CTGAGTAACAGATTGACATCTA-ACCAGGCTT-GAATTTTACCC-AATGGG----C-CAGACAT-G-A-A-GTAA-C-TT-GC-AACAGAGCAACCAGGTAATACCTGCTTCATACTCTAAACTTTTTGAGAAGAT-TTATT--TTA---------------TGTTC----------T--A---TCATTAT------AACAC-TATG--T-----TA--AG------TG----TGACCTCTGTTGCAACTCCTTATTCCCCCCCCCCCCCCCCACCCCACCACCGGATACCTGGCTTGAACTATCCTGGGAGAGGACC-ACCAGCCAAT
gi|103786 : g------TCGT-CTGAGTAAAAGAATGACCCCTGTGGATGTTCC-GCATTTGAGCCACA-AC--AC-C-CAG-C-T-C-A-A----ACT-TA-GT-ACAAGG-CCACCA----A----TAATAGATG---TAAAACATTT---AA--TACCGTGCATTG---------------TTCT-----------T--T---T-----T------GATA
gi|103787 : gaaacaaatgggcctaagacac------TTAC-CTGAGGAAAATATTGACTCCTGT------CCC-AAATTTGACCA-GA-GCG-TC-T-C-GAC-T-TGA-A-C-AATC-TTGCT-ACAGAG-TCATCACACAA----TAGTAAATG---TAAAA
gi|103788 : cgc--A------TCACTCTATGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACCC-CA-GGG-GC-C-CGTCT-T-C-A-A-CAAATC--T-TT-AGTGGA-CCCCCACGCAA----GATTCAATG---AAAAAT
gi|103789 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103790 : C-CTATGTAAAACAGTGACACCTGTGGCAGCCTT-AAATTTGACAC-CA-GAG-AC-C-CCAAC-T-TGA-A-CAAATA-TT-TA-AGGCGA-CCTTCATGCAA----TACAACATG----AAAAAATCT---AAGAT-CTGGACATT
gi|103791 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTTCATG---TAAAATAT
gi|103792 : C-CTATGTAAAACAGTGACCCCTGTGGCAGTCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTGCATG---TAAAATAT
gi|103793 : C-CTATGTAAAACAGTGACCCCTGTGGCAGCCTC-GAATTTGACTC-CA--------C-CAGAC-T-TTA-A-CAAATC-TT-TT-AAGGAA-CATCCATTCAA----TGCTACATG---TAAGATAT
gi|103794 : -CTGTGTAAAACAGTGACCCCTGTGGCGGCCCC-AAATTTGACAC-AA-GGG-AC-C-T-GACTT-T-A-A-CAAATC-TT-TT-AGGAGA-CCTCCAGGCAA----TGCTACAAG---CAAAAAAT
gi|103795 : TAAGTAAAAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAATAT
gi|103796 : CCCTGTGGTGGCCCC-GAAGTTGAAAT-CA-TGG-AC-C-CAGTT-T-G-A-C-CAAACA-TG-GT-AGAAGG-CCATTAGACAA----TGAAATATT---TAAAAAATCT---AAGCT-CCTGACATTG---------------AACT-----------TTCA---G-----A------AACAT-TTT---T----AA
gi|103797 : gagaaaaagattattagaG--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTTATT--------------TCACCTCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAAT
gi|103798 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------TCACCTCAGTA------ACCCGGTTAGAAAAATCTTGATAAAGGACT-ATCAACCAAT
gi|103799 : G--T----AAA--AG------T-----TAACCTCTGTGGAAGCCCTTAATT--------------CCACCCCAGCA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103800 : G--T----AAA--AG------T-----TAATCTCTGTGGAAGCCCTTAATT--------------TCACCCCAGTA------ACCCGGTTTGAACAATCTTGATAAAGGACT-ATCAACCAAT
gi|103801 : GTAAAACGATGACCCCTGTGGCAGCCCC-AAACTTGACCT-AA-GGG-AC-C-CA-ACAT-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGGCCTTGAATTTGCAGAGAAAATGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--TGTGCTTAT-----TAACC-CTGTGGTAG
gi|103802 : GTAAAA---TGACCCCTGTGGTGGCCCC-AAATTTGAACC-TA-GGG-AT-C-C-GACTT-C-A-A-CAAATC-TT-TT-ACAGGA-CCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGGT-CTA
gi|103803 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGTCCA-CA-GAA-AC-C-CAACT-T-C-A-A-C-AATA-TT-TT-ACAGGA-CCTCCATGCAA----TGTTACATG---TAAAATATCT---AA
gi|103804 : GTAAAACAGTGGCCCCTGTGGTGGCCCC-AAATTTGATCC-CA-GGG-AC-C-CGCCT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCCATACAA----TGCTATATG---TAAAATATCT---AAGAT-CTAGGTCTTG---------------AGCT-----------T--
gi|103805 : GTAAAACGGTGACCCCTGTGGCGGCCCT-AAATTTGGCCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAAATC-TT-TT-ACAGGA-CCCCCATGCAA----TGCTACATG---TTAAGT
gi|103806 : GTAAAAGAGTGACCCCTGTGGCGGCCCC-AAATTTGGCCC-CG-GGG-AG-C-C-GACTT-C-A-A-AAAATC-TT-TTAAGAGAA-CATCCATGCAA----TGCTACATG---TTAAATATCT---AAGAT-CTA
gi|103807 : GTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C-GAC-TAC-A-C-AAAATC-TT-TA-AAGGGA-ACACCCTGCAA----TGCTACATG---TAAAATATCT---AA
gi|103808 : GTAAAACAGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGAGA-CCGCCATGCAA----TGCTACATG---TAATATATCT---AAGAT-CTA
gi|103809 : GTAAAACAGTGACCCTTGTGGTGGCCGC-AAATTTGACCT-CA-GAG-AC-C--AGAC-A-T-G-A-CAAGTC-TA-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAACGTATCT---AA
gi|103810 : GTAAAACAGTGACCC-TATGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-T-GAC-TTC-A-A-CAAAT--TT-TT-ATGGGA-CCTCCATGCAA----TGCTACATG---TTAAATATCT---AAGGT-CTAGGCCTTG---------------AACTTTCAGAGAAAAT--G---T-----T------AAAGT-TTTG--TTTA-AAA--AG------TGCTTATAACTCCTGTGG
gi|103811 : GCAAAACAGTGACCCCTGTTGCGACCCT-CAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAAT--TT-TT-AGGGGA-CCTCCATGCAA----TGCTACATG---TAAAATATCT---AA
gi|103812 : GTAAAACAGTGACCCTTGTGGCGATCTC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-TCTCCATGCAA----AGCTACATG---TAAAATATCT---AA
gi|103813 : GTAAAACATTGACCCCTGTGGTGGCCTC-AAATTTGACCC-AA-AGG-AC-C-CAACT-T-C-A-A-CAAACC-TT-TT-AGTGGA-CCCCAATGCAA----TGCTACACA---TAAAATATCT---a
gi|103814 : GTAAAACAGTTACCCCTGTGGCGGCCCC-GAACTTGACCC-CA-AGG-AC-C-CGATT-T-T-A-A-CAAATC-TT-TT-AGGGG--CCTCCAAGCAA----TGCTACATG---TAAAATATCT---AA-GT-GTAGGCATTGAACTTTCAGAGAAACTGTT-----------T--T---T-----T------AAAAT-TTTGCTT----AAA--AT------TGCTTATAAGCCCTGTGGcaa
gi|103815 : GTAAAACAGTGGCCCCTGCGGCAGCCCC-AAATTTTACCC-CA-GTG-AC-C-CA-AC-T-T-C-A-CAAACCTTT-TT-AGGGGA-CCCCCATACAA----TGCTACATG---TAAAATAT
gi|103816 : GTAAAACAGTAATCGCTGTGGCAGCCCC-AAATTAGTCCA-CG-GGGTAC-C-T-GAC-T-TTA-A-CAACCT-TT-TT-AGTGGA-CCTCCATACAA----TGCTACATG---TAAAATATCT---AAGAT-CTA
gi|103817 : GTAAAACAATGACCCATGTGGCGGCCCT-AAATTTGACTC-TA-GGG-TC-T-C-GAC-TAT-A-A-CAAACC-TA-TT-AGGGGA-CCTCCATGCAA----TACTACAGG---TAAAATATCT---AAta
gi|103818 : GTAAAACAGTGACCCATGTGGCGGCCCC-AAATTTGACTC-TA-GGG-A--C-CAGACTT-C-A-C-CATATC-TT-TT-AGGGAA--CTCCATGCAA----TGATACATG---TACACTATCT---AAGGT-CTA
gi|103819 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103820 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-ACCCCATTCAA----TGCTACATG---GAAAATATCT---AA
gi|103821 : GTAAAACAGTGATCCCTGTGGCAGCCCC-AAATTTGTCCC-AA-GGG-AC-C-T-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATTCAT----TGCTACATG---GAAAATATCT---AA
gi|103822 : GTAAAACAGTGACCCCTGTGGTGACCCCCAAATTTGACCT-CA-GGG-AC-CTC--AC-T-T-ACA-CAAATC-TT-TT-AGGGGA-CCTCCACGCAA----TGCTACATA---TAAAATAT
gi|103823 : GTGAAACACTGACCCCTGTGGCGTCACC-AAATTTGATGC-CA-GGA-AC-C-T-GACTT-C-A-A-CAAATA-TT-TT-AGGGGA-CCTTCATGCAA----TGCTACATG---TAAAATATCT---AAGGT-CTAGACCTT
gi|103824 : GTAAAACAGGGACCACTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-T-GACTT-C-A-A-GAACTC-TT-T------AA-TC-CCATGCAA----TGCTTAATG---TAAAATATTT---AAAGT-CTATGCCTTGAACCA----------TGTT-----------T--T---T-----T------AAAGT-TTTGCTT----AAA--
gi|103825 : GTGAAACAATGACACCTGTGGCAACCCC-AAATTTTACCC-CA-GGG-AC-C-TGACC-T-C-A-A-CACATT-TT-TC-AGAGGA-TCTCCATGCAA----TGCTAAATG---TAAAATATCT---AAGTT-CTA
gi|103826 : GTAAAACAGTGATCCCTGTGGCGGCCCC-AAATTTGACCC-CA-AGG-AC-C-C-GACTT-C-A-A-CAAACC-TT-TT-AGGGTA-CCTCCATTCAA----TGCTTTATG---TAAAATATAT---AAGGT-CTA
gi|103827 : GTAAAACAGTGACCCCTTTGGCAACCCA-AAATTTGACCC-TT-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGCGA-CCTCCATGCAA----TGCTCCATG---TAAAATATCT---AAt
gi|103828 : GTGAAACAGTGACCCCTGTGACAGCCTC-AAATTTGACTC-CA-GGG-A--C-CAGAC-T-TAA-A-CAAATC-TT-TT-AGGAAA-CATCT-TTCAA----TGCTACATG---TAATATATCT---AAGGT-CTA
gi|103829 : AA--AG------T-----TAAACTCTGTGGAAGCCCTTAATT--------------TCACCCCAGCA------ACCCAGTTTGAACAATTTTGATAAAGAACT-ATCAACCAGTTGACATA
gi|103830 : tAAACGGTGACCCCTGTGGTGGCCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCTCAATGCAA----TGCTACATG---TAAAATAtcacttgcagaagatttaaaaaagctatatttatctatagcattctcatatactataaaagt
gi|103831 : tTAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGATATCT---AAGGT-CTACGCCTTG---------------AACT-----------T--
gi|103832 : TAAAACAGTGACCCATGTGGCAGCCCT-AAATTCGAACC-CA-GGG-AC-C-CATCT-T-C-A-G-CAAACC-TT-TA-AGGGGA-CCTCCATGCAT----TACTACATG---TAAAGTATCT---AAGGT-CTA
gi|103833 : TAAAACAGTGTCCGCTGTGGCAGCCTC-AAATTTGACTC-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-CAGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103834 : TAAAACAGTGACCCATGTGGCGGTCCC-AAATTTGATCC-CA-GGG-AC-C-C-GACTT-C-A-A-CAAATC-TT-TT-AGGGGA-CTTCCATGCAA----TGCTACATG---TCAA
gi|103835 : AGTGACCCCTTTGGCGGCCCC-AAATTTGACCC-CA-GGG-AC-T-C-GATGT-C-A-A-CAAATC-TG-TT-AGAGGA-CCCCTATGCAA----TGCAATATG---TAAAATATTT---AAGGT-CTA
gi|103836 : aaTGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-C-GACTT-C-A-A-CA--------------GGA-CCTCTATGCAA----TGCTATATG---C-ACATATCT---AAGGT-CTAGACCTT
gi|103837 : TGACCCCTGTGGCGGCCCC-AAATTTGACTC-CA-GGG-AC-C-CAATT-T-C-A-A-C-AATC-TT-TT-AGGGAA-TCTCCATGCAA----TACTACATG----AAAATATCT---AAGGT-CTACACCTTG---------------AACT-----------T--
gi|103838 : TGACTCCTGTGGCGGCCCC-AAATTTGACAC-CA-GCG-AC-C-C-GAC-T---------------T-TT-AGGGGA-CCTCCATGCCA----TGCTACATG---TAAAATATCT---AAAGT-CTAAGCATTG---------------
gi|103839 : TGATCCCTGTGGCGGCCCA-AAATTTGACCC-CA-GTG-AC-C-TGACC-T-C-A-A-CAAATC-TT-TT-AGAGGA-CCTCCATGCAA----TGCTACATT---TAAAATAT
gi|103840 : TGACCCATGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-CCGAC-TTC-C-A-CAAATC-TT-TT-AGGGGA-CCTCCATGCAA----TGATACATG---TAGAACATTT---AAGGT-CTAGGCCTTG---------------AACT-----------T--
gi|103841 : TGACCCCTGTGGCAGCCTC-AAATTTGACTT-CA--------C-CAGAC-T-T-A-AACAAATC-TT-TT-AGGGAA-CATCCATTCAA----TGCTACATG---TAAAATAT
gi|103842 : TGAGCTCTGTAGCAATCCC-AAATTTGACCC-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC-TT-TT-AGGGGA-CCCCCATGCAA----TGTTACATG---TAAAATGT
gi|103843 : ACCCCTGTCGCGGCCCC-ATATTTGACAT-CA-GGA-AC-C-CAACC-T-C-A-A-CAAATC-GT-TA-AGGGGA-ACTCCATACAA----TGCTACATG---TAAAATATCT---
gi|103844 : CCTGTGGCAGCCCC-AAATTTTACCC-AA-GGG-AT-C-T-GAC-TTC-A-A-CAAATC-TT-TT-AGGGGG-TCTCCATGCAA----TGCTACATG---TAAAATGCCT---AAGGT-CTAGGCCTTG---------------CACT-----------T--ca
gi|103845 : -A-A-CAAACT-TG-AT-AGAG-A-CCATCAGCCAA----TGCTACATA---TAAAATATCTC--AAAGT-CTA------G---------------T---------------------T-----T------TACAG-TTTG--GGAGAAAA--AGATTA--T-----TAGACCCTGTGGTGGCCCCGAAGT--------------TGAAATCATGG------ACCCAGTTTGACCAAACATGGTAGAAGGCC-ATTAGACAA-TGAAATA
gi|103846 : ttgCATTT---------------TCCC-----------T--A---TA----T------AGCTC-TTTG--T----AAAACAG------------TGACCCCTGTGGCAGCCCCAAATT--------------TGACCTCAGGG------ATCC
gi|103846 : aGTAAAACAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AT-C-C
gi|103847 : acattttccctatatagctcttt--T--A------TAACTCTATGTAAAA-AATGACCCCTGTGGCAGCCCC-AAATTTGACCC-CA-GGG-AC-C-
gi|103848 : acattttccttaCCTATATAAC--T--A------T--------ATAAAACGTTAACCTGTGTGGCAGCCCA-AAATTTAACCC-CA-GGG-AC-C-CGATT-T-C-A-A-CAACTA-TT-TT-ACAGGA-CCTCCATGCAA----TA-TACATG---TAAGAT
gi|103849 : cattttc--T--A------TCAC-CTGAGTAAAGGATTGACCTCTGTGGAGGCCCT-AAATTTTACAA-AA-GGG-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCAGACAA----T
gi|103850 : tCAC-CTTAGTAAAGGATCGACCCCTGTGGAAGCCCT-AAATTTGACAA-AA-GGA-GT-C-CAGAT-T-G-A-T-CAAATT-TT-AT-ACAGGG-CTACCA
gi|103851 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103852 : CAC-CTGATCAAAGGATTGACCCCTGTGGAAGCCCCTAAATTTGACAA-AA-GGA-GT-C-CAGAC-T-G-A-T-CAAATT-TT-AT-ACAGGA-CTACCAGACAA----T
gi|103853 : AAAAGTGACCCCTGTGGCAGCCCC-AAATTTGACCT-CA-GGG-AC-C-CAACT-T-C-A-A-CAAATC--T-TT-AAGAAA-TATCCATGCAA----TGCTACATG---TAAAAT