lowQualScore : 0 111 0 0 0 0 0 2 000
lowQualScore : . ... . . . . . . ...
lowQualScore : 6 555 5 5 5 5 5 7 999
consensus : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
Reference ( gi|35519 ) : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35520 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTA
gi|35524 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACT
gi|35528 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGACCAAGACTA
gi|35521 : CAAGACG-TTT---GTCGTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTA
gi|35526 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-AGTCGCATA---TGATCAAGACTAc
gi|35533 : CAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGGCTA
gi|35534 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35545 : CAAGATG-TTG---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTATG
gi|35530 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATTAAAACTATG
gi|35529 : CAAGACG-TTT---GTCTTTT-G-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTA
gi|35525 : CAAGACG-TTT---GTCTTTTTA-G-AAAA-GCAAG-CGTCGTATA---TGATCAAGACTAcaga
gi|35543 : CAAGTCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35542 : CAAGACG-ATT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCATA---TGATCAAGACTAacaaaga
gi|35541 : CAAGACG-TTT---GACTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35522 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GTAAG-CGTCGCATA---TGATCTAGACTA
gi|35539 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAaggtaagcgg
gi|35537 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAc
gi|35536 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAc
gi|35538 : CACGACG-TTT---GTCTTTT-A-G-AAAA-GCATG-CGTCGCATA---TGATCAAGACTAc
gi|35548 : CAAGACG-TTT---GTCTTTT-A-G-GAAA-GCAGG-CGTCGCCTA---TGATCAAGACTA
gi|35509 : CAAGACA-TTT---GTATTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTA
gi|35527 : cgcgatcgaacttgtCAAGACG-TTT---GTCTTGT-A-G-AAAA-GCAAG-CGTCGCACA---TGCTCAAGACTAgtatatgtgcag
gi|35553 : CAAGACG-TTT---GTATTTG-A-G-AAAA-GCAAG-CGTCGCATA---TAATCAAGACTA
gi|35551 : CAAGACA-TTT---GTCTGTT-A-G-AAAA-GCAAG-CATTGCATA---TGATCAAGACTA
gi|35518 : CAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTTGCAGA---TGATCAAGACTA
gi|35557 : CAAGACG-TTT---GTCTTTT-A-T-AAAA-GCAAG-CTTTGCATA---TGATCAAGACT
gi|35549 : CAAGACC-TTT---GTCTTTT-A-G-AAAA-TCAAG-CGTTGCATA---TGATCAAGACT
gi|35550 : CAAGAAG-TTT---GTCTTTA-A-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTA
gi|35535 : CAAGACG-TTT---GTGTTTA-A-G-AAAC-GCAAG-CGTCGCATA---TGATCAAGACTAc
gi|35552 : CAAGACG-TTT---GTCAATT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGCCTAc
gi|35510 : CAAGACG-TTT---GTCTTTT-A-C-AAAA-GCAAG-CGTCGCCGA---TGATTAAGACTAc
gi|35511 : ctgtggatcttgtCAAGACG-TTT---GTCTTTC-A-G-AAAA-TCAAG-GGTCCCATA---TGATCAAGACTA
gi|35515 : ggaacttgtCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CCTCGTATA---TGATCA
gi|35554 : tgaCAAGAGG-TTT---GTCTTTT-A-G-AAAA-GCAAT-CGTTGTACA---TGATCAAGACTA
gi|35508 : CAAGACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCA
gi|35531 : ttggttcacggtggaacgttCAAGATG-TTT---GCCTTGA-A-G-AAAA-GCAAG-CGTCGCATAATTTGATCAAGACTAT
gi|35532 : CAAGGCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGTCGA---TGATCTAGACTAagaa
gi|35544 : CAAGACGAGTC---ATCTTTT-A-G-AAAAAGCAAG-CGTCGCAGA---TGATCAAGACTA
gi|35513 : CAAGAAG-TTT---GTCTTTT-G-G-AAAA-AAAAGCCGTCGCAGA---TGATCAAGACTA
gi|35514 : cgtaatttgtCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAAGA---TAATGGAAACTAc
gi|35555 : tatCAAGATG-TTT---GTCTTTT-A-G-AAAA-GCCGG-TGTTGCAGA---AGATCAAGACCAatgaaatat
gi|35556 : CAAGACG-TTA---ATCTTTT-A-G-AAAA--CAAG-CGTCGCTGA---TGATCAATACTA
gi|35546 : CAAGCTG-TTT---TTCTTTT-A-A-AAAA-GTAAG-CGTCAAAGA---TGATCAAGACTA
gi|35540 : CAAGGCG-TTT---ATCTTTT-A-G-AAAA-GTAAG-CGTCAAAGA---TGATCACGAc
gi|35547 : CAAGAAG-TTT---GT-TGTT-A-G-AAAA-GTAAG-TGTCGAAGA---TGACCAAGACTAtctcaagaagat
gi|35517 : CAATGTG-TTT---TTATTTT-A-G-AAAA-GTAAG-CGTTGAAGA---TGATCAAGACTA
gi|35506 : aaCAGGACG-TTTA--GTCTT---A-G-GAAA-GAAAG-CGTTGAAGA---TGACCAAGACTACGc
gi|35505 : atatcagttagcgctgcaaaactgtatattgtacagaatgtCAGGGCG-CTT---ATCTTAT-A-A-AAAA-GCAAG-TTTCGGTGA---TGACCAAGACTAtgcggtatgtgtacggac
gi|35500 : atatcagttggcgctatggaacggtcatgaCAGGACG-TT----ATCTTTT-A-GAAAAA-ACAAG-TTTCAAAGA---TGATTAACACTACGcaaacgatatgcagacta
gi|35560 : gatatcagttggcgctattgaaccgtcgcaaAAGATG-TGT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATGgaaaatctgtggacta
gi|35558 : AAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGAACAAGACTAaaa
gi|35559 : AAGATG-TTT---GTGTTTT-A-G-AAAA-GCAAG-TGTGGGAGA---TGATCAAGACTA
gi|35496 : AGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGGTGA---TGATCAAGACTACG
gi|35499 : gatatcagttggcgcttttaaacggtcgtaaAAGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGCCGGTGA---TGATCAAGACTAaaagctatgcggacta
gi|35516 : gatatccgttggcgcttttgaacggtcgtaagAAGACA-TTT---TTCTTTT-A-G-AAAA-GTAAT-TGTCGAAGA---TGATCAAGACTcataagctatgcggac
gi|35503 : aagAGGACG-TTT---ATCTTTT-A-G-AATA-ACAAG-TGTCCGAAA---TGATCAAGACTAgcacaatacat
gi|35507 : gatatcagttgaacggccgttagAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGAGGA---TGATCAAAACCAcaaaagatatgcggac
gi|35502 : agttggcactatggaacagtcgtgagAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAT-TGTCGGTGA---TGATCAAGTCTACGcaaaag
gi|35498 : gatatcagtttgcacgtttgaacggtcgtaggAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGAAGGGCA---AGATCAAGACTACGaaagcta
gi|35497 : gatatcagttggcgctatgggactgtcgtgagAGGACG-TTC---ATCTTAT-A-G-AAAA-AAAAG-TGTCTGAGA---TGACCAAGACTAgaagatatgcgatcta
gi|35562 : gatatcagttggcgctatggaacggtcataagGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGCATA---TGATCAAGACTAccggaaagatatgcgaacta
gi|35564 : GACG-TTTTTTGTCTTTT-A-G-AAAA-GCAAG-GGTCGCATA---TGATCAAGACTAc
gi|35565 : GACG-TTT---GTTATTT-T-G-AAAA-GCAAG-CGTCGACGA---TGATCAAGACTA
gi|35504 : GATG-ATC---ATCTTAT-A-G-AAAA-GCAAG-CGTCAAAGA---TGATCAAGACTATG
gi|35563 : ggtatcagtttgcgccacgGACG-TTT---GATTTTA-A-G-AAAA-GCAAG-TGTCACAGA---TGATCAAGGTTACGaaagatatgcgaact
gi|35568 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCACATA---TGATCAAGACTg
gi|35523 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATCAAGACT
gi|35561 : cagtACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CG-CGCAAA---TGATTAAAACTA
gi|35566 : gaACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAc
gi|35567 : ACG-TTT---GTTTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAcggatagatatac
gi|35570 : TT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCAGA---TGATCAAGGCTA
gi|35512 : TTTTTT-ATG-GAAA-GCAAG-TGTTGGAGA---TGATCAAGctaaatata
gi|35571 : atggttgtacataacagtcCTTAT-C-G-AAAA-GCAAG-CGTCGAAGA---TGATCAAGACTA
gi|35572 : AG-TGTCGGAGA---TGATCAAGACTACGgaaaa
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|35501 ): GATATCAGCTGGCTCTGTGGAACGGTCGTGAGAGGATGTATATCTTATAGAAAAGCTTGTGTGTGAGATGATCTAGAATACAAAAGATATGCGGACT
Unaligned ( gi|35574 ): TGTCGGAGATGATCAATACTATGAAAGATATGCGGACTA
Unaligned ( gi|35573 ): AATGTCGGAGATGATCAAGGCTACGAAAGATATGC
Unaligned ( gi|35569 ): GTTTATTGGTATATATAAGCACTCGTCAAAGATGATCAAGACAACGAAAGATATGCGG
Alignments
lowQualScore : 0 111 0 0 0 0 0 1 000
lowQualScore : . ... . . . . . . ...
lowQualScore : 6 555 5 5 5 5 5 0 999
consensus : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
Reference ( family-359 ) : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
gi|35496 : AGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGGTGA---TGATCAAGACTACG
gi|35497 : gatatcagttggcgcttttaaacggtcgtaaAGGACG-TTC---ATCTTAT-A-G-AAAA-AAAAG-TGTCTGAGA---TGACCAAGACTACaaagctatgcggacta
gi|35498 : gatatcagttggcgctatggaacggtcataagAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGAAGGGCA---AGATCAAGACTACGcggaaagatatgcgaacta
gi|35499 : gatatcagttggcgctatgggactgtcgtgagAAGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGCCGGTGA---TGATCAAGACTACgaagatatgcgatcta
gi|35500 : gatatccgttggcgcttttgaacggtcgtaagCAGGACG-TT----ATCTTTT-A-GAAAAA-ACAAG-TTTCAAAGA---TGATTAACACTACGataagctatgcggac
gi|35502 : gatatcagttggcgctattgaaccgtcgcaaAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAT-TGTCGGTGA---TGATCAAGTCTACGgaaaatctgtggacta
gi|35503 : gatatcagtttgcacgtttgaacggtcgtaggAGGACG-TTT---ATCTTTT-A-G-AATA-ACAAG-TGTCCGAAA---TGATCAAGACTACaaagcta
gi|35504 : gatatcagttgaacggccgttagGATG-ATC---ATCTTAT-A-G-AAAA-GCAAG-CGTCAAAGA---TGATCAAGACTATGaaaagatatgcggac
gi|35505 : ggtatcagtttgcgccacgCAGGGCG-CTT---ATCTTAT-A-A-AAAA-GCAAG-TTTCGGTGA---TGACCAAGACTACaaagatatgcgaact
gi|35506 : atatcagttggcgctatggaacggtcatgaCAGGACG-TTTA--GTCTT---A-G-GAAA-GAAAG-CGTTGAAGA---TGACCAAGACTACGaaacgatatgcagacta
gi|35507 : atatcagttagcgctgcaaaactgtatattgtacagaatgtAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGAGGA---TGATCAAAACCACtgcggtatgtgtacggac
gi|35508 : agttggcactatggaacagtcgtgagCAAGACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAaaaag
gi|35509 : ttggttcacggtggaacgttCAAGACA-TTT---GTATTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTA
gi|35510 : cgcgatcgaacttgtCAAGACG-TTT---GTCTTTT-A-C-AAAA-GCAAG-CGTCGCCGA---TGATTAAGACTAgtatatgtgcag
gi|35511 : ctgtggatcttgtCAAGACG-TTT---GTCTTTC-A-G-AAAA-TCAAG-GGTCCCATA---TGATCAAGACTA
gi|35512 : ggaacttgtTTTTTT-ATG-GAAA-GCAAG-TGTTGGAGA---TGATCAAG
gi|35513 : atggttgtacataacagtcCAAGAAG-TTT---GTCTTTT-G-G-AAAA-AAAAGCCGTCGCAGA---TGATCAAGACTAC
gi|35514 : cgtaatttgtCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAAGA---TAATGGAAACTA
gi|35515 : tatCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CCTCGTATA---TGATCAatgaaatat
gi|35516 : tgaAAGACA-TTT---TTCTTTT-A-G-AAAA-GTAAT-TGTCGAAGA---TGATCAAGACTGC
gi|35517 : aagCAATGTG-TTT---TTATTTT-A-G-AAAA-GTAAG-CGTTGAAGA---TGATCAAGACTACacaatacat
gi|35518 : aaCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTTGCAGA---TGATCAAGACTA
gi|35519 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35520 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTA
gi|35521 : CAAGACG-TTT---GTCGTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35522 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GTAAG-CGTCGCATA---TGATCTAGACTA
gi|35523 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATCAAGACTaggtaagcgg
gi|35524 : cagtCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACT
gi|35525 : CAAGACG-TTT---GTCTTTTTA-G-AAAA-GCAAG-CGTCGTATA---TGATCAAGACTA
gi|35526 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-AGTCGCATA---TGATCAAGACTA
gi|35527 : CAAGACG-TTT---GTCTTGT-A-G-AAAA-GCAAG-CGTCGCACA---TGCTCAAGACTA
gi|35528 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGACCAAGACTA
gi|35529 : CAAGACG-TTT---GTCTTTT-G-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35530 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATTAAAACTATGaga
gi|35531 : CAAGATG-TTT---GCCTTGA-A-G-AAAA-GCAAG-CGTCGCATAATTTGATCAAGACTA
gi|35532 : CAAGGCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGTCGA---TGATCTAGACTAtagaa
gi|35533 : CAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGGCTA
gi|35534 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35535 : CAAGACG-TTT---GTGTTTA-A-G-AAAC-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35536 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35537 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35538 : CACGACG-TTT---GTCTTTT-A-G-AAAA-GCATG-CGTCGCATA---TGATCAAGACTA
gi|35539 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35540 : CAAGGCG-TTT---ATCTTTT-A-G-AAAA-GTAAG-CGTCAAAGA---TGATCACGA
gi|35541 : CAAGACG-TTT---GACTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTAtctcaagaagat
gi|35542 : CAAGACG-ATT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCATA---TGATCAAGACTA
gi|35543 : CAAGTCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35544 : CAAGACGAGTC---ATCTTTT-A-G-AAAAAGCAAG-CGTCGCAGA---TGATCAAGACTAacaaaga
gi|35545 : CAAGATG-TTG---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTATG
gi|35546 : CAAGCTG-TTT---TTCTTTT-A-A-AAAA-GTAAG-CGTCAAAGA---TGATCAAGACTAC
gi|35547 : CAAGAAG-TTT---GT-TGTT-A-G-AAAA-GTAAG-TGTCGAAGA---TGACCAAGACTA
gi|35548 : CAAGACG-TTT---GTCTTTT-A-G-GAAA-GCAGG-CGTCGCCTA---TGATCAAGACTA
gi|35549 : CAAGACC-TTT---GTCTTTT-A-G-AAAA-TCAAG-CGTTGCATA---TGATCAAGACT
gi|35550 : CAAGAAG-TTT---GTCTTTA-A-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35551 : CAAGACA-TTT---GTCTGTT-A-G-AAAA-GCAAG-CATTGCATA---TGATCAAGACTA
gi|35552 : CAAGACG-TTT---GTCAATT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGCCTAC
gi|35553 : CAAGACG-TTT---GTATTTG-A-G-AAAA-GCAAG-CGTCGCATA---TAATCAAGACTA
gi|35554 : CAAGAGG-TTT---GTCTTTT-A-G-AAAA-GCAAT-CGTTGTACA---TGATCAAGACTA
gi|35555 : CAAGATG-TTT---GTCTTTT-A-G-AAAA-GCCGG-TGTTGCAGA---AGATCAAGACCA
gi|35556 : CAAGACG-TTA---ATCTTTT-A-G-AAAA--CAAG-CGTCGCTGA---TGATCAATACTA
gi|35557 : CAAGACG-TTT---GTCTTTT-A-T-AAAA-GCAAG-CTTTGCATA---TGATCAAGACT
gi|35558 : AAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGAACAAGACTA
gi|35559 : AAGATG-TTT---GTGTTTT-A-G-AAAA-GCAAG-TGTGGGAGA---TGATCAAGACTA
gi|35560 : AAGATG-TGT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35561 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CG-CGCAAA---TGATTAAAACTACaaa
gi|35562 : gaGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGCATA---TGATCAAGACTAC
gi|35563 : GACG-TTT---GATTTTA-A-G-AAAA-GCAAG-TGTCACAGA---TGATCAAGGTTACG
gi|35564 : GACG-TTTTTTGTCTTTT-A-G-AAAA-GCAAG-GGTCGCATA---TGATCAAGACTAg
gi|35565 : GACG-TTT---GTTATTT-T-G-AAAA-GCAAG-CGTCGACGA---TGATCAAGACTA
gi|35566 : ACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCA
gi|35567 : ACG-TTT---GTTTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAcggatagatatac
gi|35568 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCACATA---TGATCAAGACT
gi|35570 : TT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCAGA---TGATCAAGGCTAC
gi|35571 : CTTAT-C-G-AAAA-GCAAG-CGTCGAAGA---TGATCAAGACTAtaaatata
gi|35572 : AG-TGTCGGAGA---TGATCAAGACTACGgaaaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35501 ): GATATCAGCTGGCTCTGTGGAACGGTCGTGAGAGGATGTATATCTTATAGAAAAGCTTGTGTGTGAGATGATCTAGAATACAAAAGATATGCGGACT
Unaligned ( gi|35574 ): TGTCGGAGATGATCAATACTATGAAAGATATGCGGACTA
Unaligned ( gi|35573 ): AATGTCGGAGATGATCAAGGCTACGAAAGATATGC
Unaligned ( gi|35569 ): GTTTATTGGTATATATAAGCACTCGTCAAAGATGATCAAGACAACGAAAGATATGCGG
Alignments
lowQualScore : 0 111 0 0 0 0 0 1 000
lowQualScore : . ... . . . . . . ...
lowQualScore : 6 555 5 5 5 5 5 0 999
consensus : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
Reference ( family-359 ) : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
gi|35496 : AGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGGTGA---TGATCAAGACTACG
gi|35497 : gatatcagttggcgcttttaaacggtcgtaaAGGACG-TTC---ATCTTAT-A-G-AAAA-AAAAG-TGTCTGAGA---TGACCAAGACTACaaagctatgcggacta
gi|35498 : gatatcagttggcgctatggaacggtcataagAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGAAGGGCA---AGATCAAGACTACGcggaaagatatgcgaacta
gi|35499 : gatatcagttggcgctatgggactgtcgtgagAAGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGCCGGTGA---TGATCAAGACTACgaagatatgcgatcta
gi|35500 : gatatccgttggcgcttttgaacggtcgtaagCAGGACG-TT----ATCTTTT-A-GAAAAA-ACAAG-TTTCAAAGA---TGATTAACACTACGataagctatgcggac
gi|35502 : gatatcagttggcgctattgaaccgtcgcaaAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAT-TGTCGGTGA---TGATCAAGTCTACGgaaaatctgtggacta
gi|35503 : gatatcagtttgcacgtttgaacggtcgtaggAGGACG-TTT---ATCTTTT-A-G-AATA-ACAAG-TGTCCGAAA---TGATCAAGACTACaaagcta
gi|35504 : gatatcagttgaacggccgttagGATG-ATC---ATCTTAT-A-G-AAAA-GCAAG-CGTCAAAGA---TGATCAAGACTATGaaaagatatgcggac
gi|35505 : ggtatcagtttgcgccacgCAGGGCG-CTT---ATCTTAT-A-A-AAAA-GCAAG-TTTCGGTGA---TGACCAAGACTACaaagatatgcgaact
gi|35506 : atatcagttggcgctatggaacggtcatgaCAGGACG-TTTA--GTCTT---A-G-GAAA-GAAAG-CGTTGAAGA---TGACCAAGACTACGaaacgatatgcagacta
gi|35507 : atatcagttagcgctgcaaaactgtatattgtacagaatgtAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGAGGA---TGATCAAAACCACtgcggtatgtgtacggac
gi|35508 : agttggcactatggaacagtcgtgagCAAGACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAaaaag
gi|35509 : ttggttcacggtggaacgttCAAGACA-TTT---GTATTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTA
gi|35510 : cgcgatcgaacttgtCAAGACG-TTT---GTCTTTT-A-C-AAAA-GCAAG-CGTCGCCGA---TGATTAAGACTAgtatatgtgcag
gi|35511 : ctgtggatcttgtCAAGACG-TTT---GTCTTTC-A-G-AAAA-TCAAG-GGTCCCATA---TGATCAAGACTA
gi|35512 : ggaacttgtTTTTTT-ATG-GAAA-GCAAG-TGTTGGAGA---TGATCAAG
gi|35513 : atggttgtacataacagtcCAAGAAG-TTT---GTCTTTT-G-G-AAAA-AAAAGCCGTCGCAGA---TGATCAAGACTAC
gi|35514 : cgtaatttgtCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAAGA---TAATGGAAACTA
gi|35515 : tatCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CCTCGTATA---TGATCAatgaaatat
gi|35516 : tgaAAGACA-TTT---TTCTTTT-A-G-AAAA-GTAAT-TGTCGAAGA---TGATCAAGACTGC
gi|35517 : aagCAATGTG-TTT---TTATTTT-A-G-AAAA-GTAAG-CGTTGAAGA---TGATCAAGACTACacaatacat
gi|35518 : aaCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTTGCAGA---TGATCAAGACTA
gi|35519 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35520 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTA
gi|35521 : CAAGACG-TTT---GTCGTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35522 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GTAAG-CGTCGCATA---TGATCTAGACTA
gi|35523 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATCAAGACTaggtaagcgg
gi|35524 : cagtCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACT
gi|35525 : CAAGACG-TTT---GTCTTTTTA-G-AAAA-GCAAG-CGTCGTATA---TGATCAAGACTA
gi|35526 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-AGTCGCATA---TGATCAAGACTA
gi|35527 : CAAGACG-TTT---GTCTTGT-A-G-AAAA-GCAAG-CGTCGCACA---TGCTCAAGACTA
gi|35528 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGACCAAGACTA
gi|35529 : CAAGACG-TTT---GTCTTTT-G-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35530 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATTAAAACTATGaga
gi|35531 : CAAGATG-TTT---GCCTTGA-A-G-AAAA-GCAAG-CGTCGCATAATTTGATCAAGACTA
gi|35532 : CAAGGCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGTCGA---TGATCTAGACTAtagaa
gi|35533 : CAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGGCTA
gi|35534 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35535 : CAAGACG-TTT---GTGTTTA-A-G-AAAC-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35536 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35537 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35538 : CACGACG-TTT---GTCTTTT-A-G-AAAA-GCATG-CGTCGCATA---TGATCAAGACTA
gi|35539 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35540 : CAAGGCG-TTT---ATCTTTT-A-G-AAAA-GTAAG-CGTCAAAGA---TGATCACGA
gi|35541 : CAAGACG-TTT---GACTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTAtctcaagaagat
gi|35542 : CAAGACG-ATT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCATA---TGATCAAGACTA
gi|35543 : CAAGTCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35544 : CAAGACGAGTC---ATCTTTT-A-G-AAAAAGCAAG-CGTCGCAGA---TGATCAAGACTAacaaaga
gi|35545 : CAAGATG-TTG---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTATG
gi|35546 : CAAGCTG-TTT---TTCTTTT-A-A-AAAA-GTAAG-CGTCAAAGA---TGATCAAGACTAC
gi|35547 : CAAGAAG-TTT---GT-TGTT-A-G-AAAA-GTAAG-TGTCGAAGA---TGACCAAGACTA
gi|35548 : CAAGACG-TTT---GTCTTTT-A-G-GAAA-GCAGG-CGTCGCCTA---TGATCAAGACTA
gi|35549 : CAAGACC-TTT---GTCTTTT-A-G-AAAA-TCAAG-CGTTGCATA---TGATCAAGACT
gi|35550 : CAAGAAG-TTT---GTCTTTA-A-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35551 : CAAGACA-TTT---GTCTGTT-A-G-AAAA-GCAAG-CATTGCATA---TGATCAAGACTA
gi|35552 : CAAGACG-TTT---GTCAATT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGCCTAC
gi|35553 : CAAGACG-TTT---GTATTTG-A-G-AAAA-GCAAG-CGTCGCATA---TAATCAAGACTA
gi|35554 : CAAGAGG-TTT---GTCTTTT-A-G-AAAA-GCAAT-CGTTGTACA---TGATCAAGACTA
gi|35555 : CAAGATG-TTT---GTCTTTT-A-G-AAAA-GCCGG-TGTTGCAGA---AGATCAAGACCA
gi|35556 : CAAGACG-TTA---ATCTTTT-A-G-AAAA--CAAG-CGTCGCTGA---TGATCAATACTA
gi|35557 : CAAGACG-TTT---GTCTTTT-A-T-AAAA-GCAAG-CTTTGCATA---TGATCAAGACT
gi|35558 : AAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGAACAAGACTA
gi|35559 : AAGATG-TTT---GTGTTTT-A-G-AAAA-GCAAG-TGTGGGAGA---TGATCAAGACTA
gi|35560 : AAGATG-TGT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35561 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CG-CGCAAA---TGATTAAAACTACaaa
gi|35562 : gaGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGCATA---TGATCAAGACTAC
gi|35563 : GACG-TTT---GATTTTA-A-G-AAAA-GCAAG-TGTCACAGA---TGATCAAGGTTACG
gi|35564 : GACG-TTTTTTGTCTTTT-A-G-AAAA-GCAAG-GGTCGCATA---TGATCAAGACTAg
gi|35565 : GACG-TTT---GTTATTT-T-G-AAAA-GCAAG-CGTCGACGA---TGATCAAGACTA
gi|35566 : ACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCA
gi|35567 : ACG-TTT---GTTTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAcggatagatatac
gi|35568 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCACATA---TGATCAAGACT
gi|35570 : TT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCAGA---TGATCAAGGCTAC
gi|35571 : CTTAT-C-G-AAAA-GCAAG-CGTCGAAGA---TGATCAAGACTAtaaatata
gi|35572 : AG-TGTCGGAGA---TGATCAAGACTACGgaaaa
blockSeqs : TTT G
blockSeqs : A C
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . A
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . C
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . T
blockSeqs : . C
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . A
blockSeqs : . T
blockSeqs : . G
blockSeqs : . T
blockSeqs : . G
blockSeqs : . G
blockSeqs : . G
blockSeqs : . T
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqCons :
originalCons : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
finalCons : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35501 ): GATATCAGCTGGCTCTGTGGAACGGTCGTGAGAGGATGTATATCTTATAGAAAAGCTTGTGTGTGAGATGATCTAGAATACAAAAGATATGCGGACT
Unaligned ( gi|35574 ): TGTCGGAGATGATCAATACTATGAAAGATATGCGGACTA
Unaligned ( gi|35573 ): AATGTCGGAGATGATCAAGGCTACGAAAGATATGC
Unaligned ( gi|35569 ): GTTTATTGGTATATATAAGCACTCGTCAAAGATGATCAAGACAACGAAAGATATGCGG
Alignments
lowQualScore : 0 111 0 0 0 0 0 1 000
lowQualScore : . ... . . . . . . ...
lowQualScore : 6 555 5 5 5 5 5 0 999
consensus : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
Reference ( family-359 ) : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCANA---TGATCAAGACTACG
gi|35496 : AGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGGTGA---TGATCAAGACTACG
gi|35497 : gatatcagttggcgcttttaaacggtcgtaaAGGACG-TTC---ATCTTAT-A-G-AAAA-AAAAG-TGTCTGAGA---TGACCAAGACTACaaagctatgcggacta
gi|35498 : gatatcagttggcgctatggaacggtcataagAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGAAGGGCA---AGATCAAGACTACGcggaaagatatgcgaacta
gi|35499 : gatatcagttggcgctatgggactgtcgtgagAAGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGCCGGTGA---TGATCAAGACTACgaagatatgcgatcta
gi|35500 : gatatccgttggcgcttttgaacggtcgtaagCAGGACG-TT----ATCTTTT-A-GAAAAA-ACAAG-TTTCAAAGA---TGATTAACACTACGataagctatgcggac
gi|35502 : gatatcagttggcgctattgaaccgtcgcaaAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAT-TGTCGGTGA---TGATCAAGTCTACGgaaaatctgtggacta
gi|35503 : gatatcagtttgcacgtttgaacggtcgtaggAGGACG-TTT---ATCTTTT-A-G-AATA-ACAAG-TGTCCGAAA---TGATCAAGACTACaaagcta
gi|35504 : gatatcagttgaacggccgttagGATG-ATC---ATCTTAT-A-G-AAAA-GCAAG-CGTCAAAGA---TGATCAAGACTATGaaaagatatgcggac
gi|35505 : ggtatcagtttgcgccacgCAGGGCG-CTT---ATCTTAT-A-A-AAAA-GCAAG-TTTCGGTGA---TGACCAAGACTACaaagatatgcgaact
gi|35506 : atatcagttggcgctatggaacggtcatgaCAGGACG-TTTA--GTCTT---A-G-GAAA-GAAAG-CGTTGAAGA---TGACCAAGACTACGaaacgatatgcagacta
gi|35507 : atatcagttagcgctgcaaaactgtatattgtacagaatgtAGGACG-TTT---ATCTTAT-A-G-AAAA-GCAAG-TGTCGAGGA---TGATCAAAACCACtgcggtatgtgtacggac
gi|35508 : agttggcactatggaacagtcgtgagCAAGACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAaaaag
gi|35509 : ttggttcacggtggaacgttCAAGACA-TTT---GTATTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTA
gi|35510 : cgcgatcgaacttgtCAAGACG-TTT---GTCTTTT-A-C-AAAA-GCAAG-CGTCGCCGA---TGATTAAGACTAgtatatgtgcag
gi|35511 : ctgtggatcttgtCAAGACG-TTT---GTCTTTC-A-G-AAAA-TCAAG-GGTCCCATA---TGATCAAGACTA
gi|35512 : ggaacttgtTTTTTT-ATG-GAAA-GCAAG-TGTTGGAGA---TGATCAAG
gi|35513 : atggttgtacataacagtcCAAGAAG-TTT---GTCTTTT-G-G-AAAA-AAAAGCCGTCGCAGA---TGATCAAGACTAC
gi|35514 : cgtaatttgtCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAAGA---TAATGGAAACTA
gi|35515 : tatCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CCTCGTATA---TGATCAatgaaatat
gi|35516 : tgaAAGACA-TTT---TTCTTTT-A-G-AAAA-GTAAT-TGTCGAAGA---TGATCAAGACTGC
gi|35517 : aagCAATGTG-TTT---TTATTTT-A-G-AAAA-GTAAG-CGTTGAAGA---TGATCAAGACTACacaatacat
gi|35518 : aaCAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTTGCAGA---TGATCAAGACTA
gi|35519 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35520 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTA
gi|35521 : CAAGACG-TTT---GTCGTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35522 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GTAAG-CGTCGCATA---TGATCTAGACTA
gi|35523 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATCAAGACTaggtaagcgg
gi|35524 : cagtCAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACT
gi|35525 : CAAGACG-TTT---GTCTTTTTA-G-AAAA-GCAAG-CGTCGTATA---TGATCAAGACTA
gi|35526 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-AGTCGCATA---TGATCAAGACTA
gi|35527 : CAAGACG-TTT---GTCTTGT-A-G-AAAA-GCAAG-CGTCGCACA---TGCTCAAGACTA
gi|35528 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGACCAAGACTA
gi|35529 : CAAGACG-TTT---GTCTTTT-G-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35530 : CAAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGAATA---TGATTAAAACTATGaga
gi|35531 : CAAGATG-TTT---GCCTTGA-A-G-AAAA-GCAAG-CGTCGCATAATTTGATCAAGACTA
gi|35532 : CAAGGCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGTCGA---TGATCTAGACTAtagaa
gi|35533 : CAAAACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGGCTA
gi|35534 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35535 : CAAGACG-TTT---GTGTTTA-A-G-AAAC-GCAAG-CGTCGCATA---TGATCAAGACTAC
gi|35536 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35537 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35538 : CACGACG-TTT---GTCTTTT-A-G-AAAA-GCATG-CGTCGCATA---TGATCAAGACTA
gi|35539 : CAAGACA-TTT---GTCTTTT-A-G-AAAA-GCAAG-CATCACATA---TGATCAAGACTAC
gi|35540 : CAAGGCG-TTT---ATCTTTT-A-G-AAAA-GTAAG-CGTCAAAGA---TGATCACGA
gi|35541 : CAAGACG-TTT---GACTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTAtctcaagaagat
gi|35542 : CAAGACG-ATT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCATA---TGATCAAGACTA
gi|35543 : CAAGTCG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTTGCATA---TGATCAAGACTA
gi|35544 : CAAGACGAGTC---ATCTTTT-A-G-AAAAAGCAAG-CGTCGCAGA---TGATCAAGACTAacaaaga
gi|35545 : CAAGATG-TTG---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAAACTATG
gi|35546 : CAAGCTG-TTT---TTCTTTT-A-A-AAAA-GTAAG-CGTCAAAGA---TGATCAAGACTAC
gi|35547 : CAAGAAG-TTT---GT-TGTT-A-G-AAAA-GTAAG-TGTCGAAGA---TGACCAAGACTA
gi|35548 : CAAGACG-TTT---GTCTTTT-A-G-GAAA-GCAGG-CGTCGCCTA---TGATCAAGACTA
gi|35549 : CAAGACC-TTT---GTCTTTT-A-G-AAAA-TCAAG-CGTTGCATA---TGATCAAGACT
gi|35550 : CAAGAAG-TTT---GTCTTTA-A-G-AAAA-GCAAG-CGTCGCATA---GGATCAAGACTAC
gi|35551 : CAAGACA-TTT---GTCTGTT-A-G-AAAA-GCAAG-CATTGCATA---TGATCAAGACTA
gi|35552 : CAAGACG-TTT---GTCAATT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGCCTAC
gi|35553 : CAAGACG-TTT---GTATTTG-A-G-AAAA-GCAAG-CGTCGCATA---TAATCAAGACTA
gi|35554 : CAAGAGG-TTT---GTCTTTT-A-G-AAAA-GCAAT-CGTTGTACA---TGATCAAGACTA
gi|35555 : CAAGATG-TTT---GTCTTTT-A-G-AAAA-GCCGG-TGTTGCAGA---AGATCAAGACCA
gi|35556 : CAAGACG-TTA---ATCTTTT-A-G-AAAA--CAAG-CGTCGCTGA---TGATCAATACTA
gi|35557 : CAAGACG-TTT---GTCTTTT-A-T-AAAA-GCAAG-CTTTGCATA---TGATCAAGACT
gi|35558 : AAGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGAACAAGACTA
gi|35559 : AAGATG-TTT---GTGTTTT-A-G-AAAA-GCAAG-TGTGGGAGA---TGATCAAGACTA
gi|35560 : AAGATG-TGT---GTCTTTT-A-G-AAAA-GCAAG-CGTCGCATA---TGATCAAGACTATG
gi|35561 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CG-CGCAAA---TGATTAAAACTACaaa
gi|35562 : gaGACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-TGTCGCATA---TGATCAAGACTAC
gi|35563 : GACG-TTT---GATTTTA-A-G-AAAA-GCAAG-TGTCACAGA---TGATCAAGGTTACG
gi|35564 : GACG-TTTTTTGTCTTTT-A-G-AAAA-GCAAG-GGTCGCATA---TGATCAAGACTAg
gi|35565 : GACG-TTT---GTTATTT-T-G-AAAA-GCAAG-CGTCGACGA---TGATCAAGACTA
gi|35566 : ACG-TTT---GTCTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCA
gi|35567 : ACG-TTT---GTTTTAT-A-G-AAAA-GCAAG-CGTCGCAGA---TGATCAcggatagatatac
gi|35568 : ACG-TTT---GTCTTTT-A-G-AAAA-GCAAG-CGTCACATA---TGATCAAGACT
gi|35570 : TT---GTCTTTT-A-G-AAAA-GCAAG-CATCGCAGA---TGATCAAGGCTAC
gi|35571 : CTTAT-C-G-AAAA-GCAAG-CGTCGAAGA---TGATCAAGACTAtaaatata
gi|35572 : AG-TGTCGGAGA---TGATCAAGACTACGgaaaa
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35501 ): GATATCAGCTGGCTCTGTGGAACGGTCGTGAGAGGATGTATATCTTATAGAAAAGCTTGTGTGTGAGATGATCTAGAATACAAAAGATATGCGGACT
Unaligned ( gi|35574 ): TGTCGGAGATGATCAATACTATGAAAGATATGCGGACTA
Unaligned ( gi|35573 ): AATGTCGGAGATGATCAAGGCTACGAAAGATATGC
Unaligned ( gi|35569 ): GTTTATTGGTATATATAAGCACTCGTCAAAGATGATCAAGACAACGAAAGATATGCGG