lowQualScore : 111111111
lowQualScore : 1 555555555 11 333333333333333333333 0000 2 111111111 1 00000 00 0 0
lowQualScore : . ......... .. ..................... .... . ......... . ..... .. . .
lowQualScore : 6 555555555 88 999999999999999999999 7777 4 333333333 4 88888 66 4 4
consensus : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
Reference ( gi|112086 ) : AGGGGAATCAGTAGA--------CCCC-CC---------------------TTTG----TGTATGTTACCGTAACA---------TACAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112059 : AGGGGAATCAGTAGA--------ACCT-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112064 : AGGGGAATCTGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TACAC-----TTATCTATG--T-TGA-GGGGAATCTGTA
gi|112121 : AGGGGAATCTGTAGA--------ACTA-CC---------------------TTTG----TGTATGTTACCATAACA---------TACAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112089 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCTTAACA---------TGTAC-----TTATCTGTG--T-TGA-GGGAAATCTATA
gi|112060 : AGGGGAATCAGTAGA--------ACCT-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTACCTGTT--T-TGA-GGGGAATCTGTA
gi|112061 : AGGGGAATCAGTAGA--------GCCT-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--C-TGA-GGGGAATCAGTA
gi|112087 : AGGGGAATCGGTAGA--------ACCC-CC---------------------TTTG----TATATGTTACCATAACA---------TATAC-----TCATCTGTA--T-TGA-GGGGAATCTGTA
gi|112105 : AGGGGAATCAGTAGA--------ACCC-CA---------------------TTTA----TGTATGTTACCATACCA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112063 : AGGGGAATAAGTAGA--------ACCT-CC---------------------TTTG----TGTATGTTACCATAGCA---------TAAAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112062 : AGGGGAATCAGTAGA--------GCCT-CC---------------------TTTC----TGTATGTTACCATAACC---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112122 : AGGGGATTCTGTAGA--------ATCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112104 : AGGGGAATCTGTAGA--------ACCA-CC---------------------TTTG----TTTATGTTACCATAACA---------TACAC-----TTATCTGTG--T-TGA-GAGGAATCTGTA
gi|112090 : AGGGGAATCTGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACG---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCAGT
gi|112123 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCGTAACA---------TATAC-----ATAACTATG--T-TGA-GGGGTATCTGTA
gi|112110 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTA----TGTATGTTACCATAACA---------TAGAA-----TTATCTGTA--T-TGA-GGGGAACCTGTA
gi|112106 : AGAGGAATCAGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-CGA-GGGTAATCTGTA
gi|112108 : AGGGGAATCTGTAGA--------ACCC-CCA--------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--C-TGA-GGGAAATCTGTA
gi|112065 : AGGGGAATCAGTAGA--------GCCT-CA---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--C-TGA-GGGGAATCAGTA
gi|112066 : AGGGGAATCAGTAGA--------GCCT-TC---------------------TTTG----TGTATGTTACCATAACA---------TATAA-----TTATCTGTG--T-TGA-GGGGAATCAGTA
gi|112068 : AGGGGAATCTGTAGA--------ACCC-CT---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTATG--T-TGA-GGGGAATCAGTA
gi|112067 : AGGGGAATCTGTAGA--------ACTC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TAA-GGGGAATCAGTA
gi|112085 : AGGGGAAACAGTAGA--------ACTT-CC---------------------TTTG----TGTATGTTTCCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112107 : AGGGGAATCAGTAGA--------ACCG-CT---------------------TTTG----TGTATGTTTCCATTACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112088 : AGGGGAATCAGTCGA--------ACCT-CC---------------------TTTG----TGTATGTTACCATGACA---------TATAC-----TTATCTGTA--T-TTA-GGGGAATCTGTA
gi|112112 : AGGGAAATCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATTACA---------TAAAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112070 : AGGGCAATCTGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----AAATCTGTG--T-TGA-GGGGAATCTGTA
gi|112071 : AGGGGAACCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAT-----ATAACTGTG--T-TGA-GGGCAATCTGTA
gi|112072 : AGGGAAATGTGTAAA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCAGTA
gi|112124 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----ATAACTATA--T-TGA-GGGGATTCTGTA
gi|112097 : AGGGGAATCAGTAGA--------CCTC-CC---------------------TTTG----TATATGTTACCATAACA---------TTTCT-----TTATCTGTT--T-TGA-GGGGAATCCGTA
gi|112111 : AGGGGAATCAGTAGA--------ACCA-TC---------------------TTTG----CATATGTTACCATAACA---------TATAC-----TTACCTGTG--T-TGA-GGGGAATCAGTA
gi|112091 : AGGGGAATCAGTACA--------ACCT-CC---------------------TTTG----TGTATATTACCATAACA---------TATAC-----ATATCTGTG--T-TGA-GGGAAATCTG
gi|112074 : AGGGGAAACAGTAGA--------ACCC-CC---------------------TTTG----TGTAGGTTTCCATAACA---------TGTAC-----TTATCTGTG--A-TGA-GGGGAATCTGTA
gi|112096 : AGGGGAGTCAGTAGA--------ACCC-CC---------------------TTTGTTTGTGTATGTTATAGTAACA---------TGTAC-----TTAGCTGTG--T-TGA-GGGGAATCTGTA
gi|112075 : AGGGGAATCTGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATATCA---------TATAC-----TTATCAATG--T-TGA-GGGGAATATGTA
gi|112080 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCCTAACA---------CATAC-----TTGTCAGTG--T-TGG-GGGGAATATGCA
gi|112113 : AGAGGAATCTGTAGA--------ACTC-AC---------------------TTTG----TTTATGTTACCATAACA---------TATAC-----TTACCTGTG--T-TGA-GGGGAATCTGTA
gi|112069 : AGGGGAATCAGTAGA--------ACCT-CC---------------------TTTG----TGTACGTTAGCATAACA---------TATAT-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112076 : AGGGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAA-----ATAACTGTG--T-TTAGGGGGAATCTGTA
gi|112078 : AGGGGAATCTGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATATCA---------TATAA-----TTATCAGTG--T-TGA-GGGGAATATGTA
gi|112125 : AGGGGAATCTGTAGA--------ACCA-CC---------------------TTTG----TTTATGTTACCATAACA---------TATAC-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112126 : AGGGGTATCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--C-CGA-GGGTAATCTGTA
gi|112092 : AGGGGAATCAGTAGC--------ACCG-CG---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATATGTG--T-TAA-GGGGAATCTG
gi|112109 : AGAGGAATCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----ATAGCTGTG--T-TGA-GAGGAATCTGTA
gi|112073 : AGGGAAATCAGTAGA--------AACT-CC---------------------TTTG----TGTATGTTACTATAACA---------TATAC-----ATAACTGTG--T-TGA-GGAGAATCTGTA
gi|112128 : AGGGTAATCTGTAGA--------ACCA-CT---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TCA-GGGGAATCAGTA
gi|112127 : AGGGTAATCTGTAGA--------ACCA-CA---------------------TTAG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTG
gi|112081 : AGGGGAATCTGTAAA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAAAA---------AATAC-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112094 : AGGGGAATCAGTAGA--------ACCA-CC---------------------TTTG----CATATCTTACCATAACA---------TATAC-----TTAGCTGTA--T-TGA-GGGGAATCAGTA
gi|112100 : AGGGGAATCAGTAGA--------CCCA-CC---------------------TTTG----CATGTTTTACCATTACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAAACAGTA
gi|112129 : AGGGGAATCAGTAGA--------ACCAATT---------------------TTTG----TGTATGTTTCCATTACA---------TATAC-----TTACCTGTG--T-TGA-GGGGAATCTGTA
gi|112114 : AGGGGAATCAGTAGA--------ACCC-CT---------------------TTT-----TGTATGTTGCCATAACA---------TATAC-----ATAACTGTG--T-TAA-GGGGAATCTG
gi|112134 : AGGGGAATCAGTAGA--------CCCC-CCCCCCCCCACACACACACACCCTTTG----TGTATGTTACCATAACA---------TATAC-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112115 : AGGGGAATCTGTAAA--------ACTA-CC---------------------TTTG----TGTATGTTACCATAACA---------T--AC-----TTATCTGTG--T-TGA-GGGGAATC
gi|112077 : AGGGGAATCAGAAGA--------ACCT-CC---------------------TGTG----TGTATGTTAGCATAACA---------TATAT-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112079 : AGGGGAATCTGTAGA--------ACCC-CC---------------------ATTG----TGTATGTTACTATATCA---------TATAC-----TTATCAGTG--T-TGA-GAGGAATATGTA
gi|112102 : AGGGGAATCTGTAAA--------ACCC-CC---------------------TTTG----CATCTGATACCATGACA---------TACAC-----TTATATATG--T-TGA-GGGGAATCTGTA
gi|112118 : AGGGGAATCTGTAGA--------ACCC-CC---------------------TTTG----CATCTGATACCATGACA---------TACAC-----TTATCTATG--T-TGA-GGGGAATGTG
gi|112093 : AGGGGAATCAGTTAA--------ATCT-CC---------------------TTTG----TATATGTTACCATAACA---------TGTAC-----TTATCTGTG--T-TGA--GTGAATCTGTA
gi|112132 : AGGGGAATCAGTAGA--------ACCC-CG---------------------TTTC----TGTATGTTACCATGACA---------TATAC-----ATAACTGTT--T-TGA-CGGGAATCTGTA
gi|112098 : AGGGGAATCAGTAAA--------ACTA-AC---------------------TTTG----TGTATGTTACCATAAAA---------T--AC-----TTATCTGTG--T-TGA-GGGGAATCAGTA
gi|112130 : AGGGGAATCTGTAGA--------ACCA-AT---------------------TTTG----TGTATGATACCATAACA---------TATAC-----ATAACTGTG--T-TGA-GGGGAATCTGTA
gi|112095 : AGGGGTATCGGTAAA--------AACC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTAGCTGTA--T-TGA-AAGAAATCTGTA
gi|112131 : AGGGGATTCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATGACA---------TATAC-----TTAGCTGTG--T-CAA-GGGTAATCTGTA
gi|112117 : AGAGGAATCTGTAGA--------ACTC-AC---------------------TTTG----TTTATGTTACCTTGACA---------TATAC-----TTATCTGTG--T-TGA-AGGGAATCTTTA
gi|112083 : AGGAGAATCTGTAGA--------GCCT-CC---------------------TTTG----CATCTGATATCATGACA---------TACAC-----TAATCTGTG--T-TGA-GGGGAATCTGTA
gi|112101 : AGGGGAATCAATAGA--------ACCC-CC---------------------TTTG----TTTATGTTACCATAACATAATATTATTATAC-----TTATCAG-G--T-TGA-GGGGAATCAGTA
gi|112082 : AGGGGAATTAGTTGA--------ACCC-GC---------------------TT-G----TGTAGGTTTCCATAACA---------TGTAC-----TTATCTGTG--A-TGA-GGGGAATCTGTA
gi|112133 : AGGGGAATCTGTAAA--------ACCA-CC---------------------TTTG----TGTATGTTACCATGACA---------TATAC-----ATAACTGTA--T-TAA-GGGTAATCTGTA
gi|112116 : AGGGGAATCAGTAGA--------ACCC-CT---------------------TTT-----TGTATGTTACCAAAACA---------TATAC-----ATAACTGTG--T-TAA-GGGG-ATCTG
gi|112099 : AGGGGAATTAGTAGA--------ACCT-TC---------------------TTTG----CATATGTTACCAAAACA---------TATAC-----TTACCTGTG--A-TGA-TGGGAATCAGTA
gi|112135 : AGGGTAATCAGTAGAACCCCCCCCCCC-CC---------------------TTTG----CGTATGTTACCATAACA---------TATAC-----ATAACTGTA--C-TAA-GGGTAATCTGTA
gi|112084 : AAGGGAATCAGTAGA--------ACCC-CC---------------------ATTG----TGTATGTTACCATAACA---------TACAC-----ATAACTGTG--T-ATA-GGGG
gi|112136 : AGGGGAATCTGTAGA--------ACCA-CT---------------------TTTG----CATCTGATACCATGACA---------TACAC-----TGATATGTG--T-TGA-AGGGAATCTGTA
gi|112119 : AGGGGAATCTGAAAA--------ACCA-CC---------------------TTTG----TGTATGTTGCCATAACA---------TATAT-----TAACCTGTG--T-CAA-GGGTAATCTGTA
gi|112120 : AAGGGGATCTGAAAA--------ACCA-CC---------------------TTTG----TGTATGTTGCCATAACA---------TATAC-----ATAACTGCG--T-TGA-GGGGAATCAGTA
gi|112103 : AGGGGAATCAATACA--------ACCC-CC---------------------TTTG----TGTATATAATCATAACA---------TTTAC-----TAATCTGTG--C-TGA---GGAATCAGTA
gi|112137 : AGGGGAATCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTT
gi|112141 : GAGGAATCAGTAAA--------ACCT-CC---------------------TTTG----TGTATGTAACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112142 : GAGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTAACCATAACA---------TTTAC-----TTATCTGTG--T-TGA-GGGGAATCTATA
gi|112143 : GGGGAATCAGTAGA--------TCCT-CC---------------------TTT-----TGTATGTTACCATAACA---------TTTAC-----TTATCTGTG--T-TGA-CGGGAATCTGTA
gi|112145 : GAGGAATCAGTAGAA-------CCCC-CC---------------------TCTT----TGTATGTTACCATAACA---------TTTAC-----TTATCTGTG--T-TGA-AGGGAATCTGTA
gi|112144 : GGGTAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATCTTAACATAACA---------TTTAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112138 : GGGGAATCTGTAGA--------ACCA-CC---------------------TTTG----CATCTGATACCATGACA---------TATAC-----TTACCTGTG--T-TGA-GGGGAATCTGTA
gi|112139 : GGGGAATCTGTAGA--------ACCA-CC---------------------TTTG----CATCTGATACCATGACA---------TATAC-----TTATTTGTG--T-TGA-GGGGAATCTGTA
gi|112140 : GGGGAATATGCAGA--------ACCA-CT---------------------TTTG----TGTATGTTTCCATTACA---------TATAC-----TTATCTGTG--G-TGA-GGGAAATGTGTA
gi|112146 : GAGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TTTAC-----TTA---NNN--N-NNN-NNNGAATCAGTA
gi|112148 : GGGAGTCAGTAGA--------ACCA-CT---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112149 : GGGAATCGGCAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCAGAACA---------TATAC-----TTATCTGTG--T-TGA-GAGGAATCTGTA
gi|112147 : GGGAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATAC-----ATAACTGTGTTT-TG--GGGGAATCTGTA
gi|112150 : GGGAATCAGTAGA--------ACCA-CG---------------------TTTG----CATATGTTACTATAACA---------TACAC-----TTATCTGTG--T-TGA-ATGGAATCTGTA
gi|112151 : GGGAATCTGTAGA--------ACCA-CC---------------------TTTG----TGTATGTTACCATAATT---------TACAC-----TGATCTGTG--T-TGA-GGGGATTCTGTA
gi|112152 : GAATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TTTAC-----TTATCTGTG--T-TGA-GGGTAATCTGTA
gi|112153 : ATCAGTAGA--------ACCC-CC---------------------TTTG----TGTATGTTACCATAACA---------TATGC-----TTATCTGTG--T-TGA--GGGAATCTGTA
gi|112154 : TCAGTAGA--------ACCT-CC---------------------TTTG----TGTATGTTACCATAACA---------TTTAC-----TTATCTGTG--T-TGA-GGGGAATCTGTA
gi|112109 : C---------------------TATG----TATATGTTATGGTAACA---------TACAC-----
gi|112070 : agaggaatctgtagaaccaccttt---------------------TTTG----TATATGTTATGGTAACA---------TACAC-----ctgtgttgagaggaatctgta
gi|112155 : agggcaatctgtagaaccccctttTTG----TGTATGTTACCATAACA---------TATAC-----ATAACTGTG--T-TGA-GGGGAATCAGTAtctgtgttgaggggaatctgta
gi|112123 : TG----TATATGTTACGGTAACA---------TACAC-----
gi|112124 : aggggaatcagtagaaccccctttTG----TATATGTTATGGTAACA---------TACAC-----taactatgttgaggggtatctgta
gi|112147 : aggggaatcagtagaaccccctttTG----TATATGTTATGGTAACA---------TACAC-----taactatattgaggggattctgta
gi|112073 : gggaatcagtagaaccccctttTG----TATATGTTATAGTAACA---------TACAC-----taactgtgttttgggggaatctgta
gi|112134 : agggaaatcagtagaaactcctttTG----TATATGTTATGGTAACA---------TACACAAAGGGTGTGTGTG--TGTGG-GGGGtaactgtgttgaggagaatctgta
gi|112084 : aggggaatcagtagacccccccTG----TGTATGTTATGGTAACA---------TACAC-----taactgtgttgaggggaatctgta
gi|112155 : aagggaatcagtagaacccccattTG----TATATGTTATGGTAACA---------TACAC-----taactgtgtatagggg
gi|112059 : ttG----TATATGTTATGGTAACA---------TACAC-----taactgtgttgaggggaatcagta
gi|112064 : aggggaatcagtagaacctcctttG----TGTATGTTATGGTAACA---------TACAC-----ttatctgtgttgaggggaatctgta
gi|112121 : aggggaatctgtagaaccccctttG----TGTATGTTATGGTAACA---------TACAC-----ttatctatgttgaggggaatctgta
gi|112060 : aggggaatctgtagaactacctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgttgaggggaatctgta
gi|112061 : aggggaatcagtagaacctcctttG----TATATGTTATGGTAACA---------TACAC-----ttacctgttttgaggggaatctgta
gi|112122 : aggggaatcagtagagcctcctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgctgaggggaatcagta
gi|112148 : aggggattctgtagaatcccctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgttgaggggaatctgta
gi|112106 : gggagtcagtagaaccacttttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgttgaggggaatctgta
gi|112108 : agaggaatcagtagaaccacctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgtcgagggtaatctgta
gi|112065 : aggggaatctgtagaacccccatttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgctgagggaaatctgta
gi|112068 : aggggaatcagtagagcctcatttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgctgaggggaatcagta
gi|112067 : aggggaatctgtagaaccccttttG----TATATGTTATGGTAACA---------TACAC-----ttatctatgttgaggggaatcagta
gi|112072 : aggggaatctgtagaactccctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgttaaggggaatcagta
gi|112096 : agggaaatgtgtaaaaccccctttG----TACATGTTACTATAACA---------TACAC-----ttatctgtgttgaggggaatcagta
gi|112126 : aggggagtcagtagaaccccctttgtttG----TATATGTTATGGTAACA---------TACAC-----ttagctgtgttgaggggaatctgta
gi|112092 : aggggtatctgtagaaccacctttG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgccgagggtaatctgta
gi|112128 : aggggaatcagtagcaccgcgtttG----TATATGTTATGGTAACA---------TACAC-----ttatatgtgttaaggggaatctg
gi|112127 : agggtaatctgtagaaccacttttG----TATATGTTATGGTAACA---------TACAC-----TAATGTG-G--T-Tttatctgtgttcaggggaatcagta
gi|112095 : agggtaatctgtagG----TATATGTTATGGTAACA---------TACAC-----ttatctgtgttgaggggaatctg
gi|112115 : aggggtatcggtaaaaacccctttGTATGTTATGGTAACA---------TACAC-----ttagctgtattgaaagaaatctgta
gi|112156 : aggggaatctgtaaaactacctttGTTACCATAACA---------TATAC-----ATAACTGTG--T-TGA-GGGGAATCTGTAttatctgtgttgaggggaatc
Alignments
lowQualScore : 1 11 333333333333333333333 11111111 0 0000 111111111 00 0
lowQualScore : . .. ..................... ........ . .... ......... .. .
lowQualScore : 5 77 555555555555555555555 99999999 4 9999 666666666 66 4
consensus : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
Reference ( family-312 ) : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112059 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112060 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTACCTGTT--TTGA-GGGGAATCTGTA
gi|112061 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112062 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TC----TGTATGTTACCATAACC---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112063 : AGGGGAATAAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAGCA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112064 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTATG--TTGA-GGGGAATCTGTA
gi|112065 : AGGGGAATCAGTAGAGCCT-C---------------------A--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112066 : AGGGGAATCAGTAGAGCCT-T---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAATTATCTGTG--TTGA-GGGGAATCAGTA
gi|112067 : AGGGGAATCTGTAGAACTC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTAA-GGGGAATCAGTA
gi|112068 : AGGGGAATCTGTAGAACCC-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTATG--TTGA-GGGGAATCAGTA
gi|112069 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTACGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112070 : AGGGCAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACAAATCTGTG--TTGA-GGGGAATCTGTA
gi|112071 : AGGGGAACCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATATATAACTGTG--TTGA-GGGCAATCTGTA
gi|112072 : AGGGAAATGTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112073 : AGGGAAATCAGTAGAAACT-C---------------------C--------TT-TG----TGTATGTTACTATAACA---------TATACATAACTGTG--TTGA-GGAGAATCTGTA
gi|112074 : AGGGGAAACAGTAGAACCC-C---------------------C--------TT-TG----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112075 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATACTTATCAATG--TTGA-GGGGAATATGTA
gi|112076 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAAATAACTGTG--TTTAGGGGGAATCTGTA
gi|112077 : AGGGGAATCAGAAGAACCT-C---------------------C--------TG-TG----TGTATGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112078 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATAATTATCAGTG--TTGA-GGGGAATATGTA
gi|112079 : AGGGGAATCTGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACTATATCA---------TATACTTATCAGTG--TTGA-GAGGAATATGTA
gi|112080 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCCTAACA---------CATACTTGTCAGTG--TTGG-GGGGAATATGCA
gi|112081 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAAAA---------AATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112082 : AGGGGAATTAGTTGAACCC-G---------------------C--------TT--G----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112083 : AGGAGAATCTGTAGAGCCT-C---------------------C--------TT-TG----CATCTGATATCATGACA---------TACACTAATCTGTG--TTGA-GGGGAATCTGTA
gi|112084 : AAGGGAATCAGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACCATAACA---------TACACATAACTGTG--TATA-GGGG
gi|112085 : AGGGGAAACAGTAGAACTT-C---------------------C--------TT-TG----TGTATGTTTCCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112086 : AGGGGAATCAGTAGACCCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112087 : AGGGGAATCGGTAGAACCC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TATACTCATCTGTA--TTGA-GGGGAATCTGTA
gi|112088 : AGGGGAATCAGTCGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTATCTGTA--TTTA-GGGGAATCTGTA
gi|112089 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCTTAACA---------TGTACTTATCTGTG--TTGA-GGGAAATCTATA
gi|112090 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACG---------TATACTTATCTGTG--TTGA-GGGGAATCAGT
gi|112091 : AGGGGAATCAGTACAACCT-C---------------------C--------TT-TG----TGTATATTACCATAACA---------TATACATATCTGTG--TTGA-GGGAAATCTG
gi|112092 : AGGGGAATCAGTAGCACCG-C---------------------G--------TT-TG----TGTATGTTACCATAACA---------TATACTTATATGTG--TTAA-GGGGAATCTG
gi|112093 : AGGGGAATCAGTTAAATCT-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TGTACTTATCTGTG--TTGA--GTGAATCTGTA
gi|112094 : AGGGGAATCAGTAGAACCA-C---------------------C--------TT-TG----CATATCTTACCATAACA---------TATACTTAGCTGTA--TTGA-GGGGAATCAGTA
gi|112095 : AGGGGTATCGGTAAAAACC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTAGCTGTA--TTGA-AAGAAATCTGTA
gi|112096 : AGGGGAGTCAGTAGAACCC-C---------------------C--------TT-TGTTTGTGTATGTTATAGTAACA---------TGTACTTAGCTGTG--TTGA-GGGGAATCTGTA
gi|112097 : AGGGGAATCAGTAGACCTC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TTTCTTTATCTGTT--TTGA-GGGGAATCCGTA
gi|112098 : AGGGGAATCAGTAAAACTA-A---------------------C--------TT-TG----TGTATGTTACCATAA-A----------ATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112099 : AGGGGAATTAGTAGAACCT-T---------------------C--------TT-TG----CATATGTTACCAAAACA---------TATACTTACCTGTG--ATGA-TGGGAATCAGTA
gi|112100 : AGGGGAATCAGTAGACCCA-C---------------------C--------TT-TG----CATGTTTTACCATTACA---------TATACTTATCTGTG--TTGA-GGGGAAACAGTA
gi|112101 : AGGGGAATCAATAGAACCC-C---------------------C--------TT-TG----TTTATGTTACCATAACATAATATTATTATACTTATCAG-G--TTGA-GGGGAATCAGTA
gi|112102 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATATATG--TTGA-GGGGAATCTGTA
gi|112103 : AGGGGAATCAATACAACCC-C---------------------C--------TT-TG----TGTATATAATCATAACA---------TTTACTAATCTGTG--CTGA---GGAATCAGTA
gi|112104 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112105 : AGGGGAATCAGTAGAACCC-C---------------------A--------TT-TA----TGTATGTTACCATACCA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112106 : AGAGGAATCAGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TCGA-GGGTAATCTGTA
gi|112107 : AGGGGAATCAGTAGAACCG-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112108 : AGGGGAATCTGTAGAACCC-C---------------------CA-------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGAAATCTGTA
gi|112109 : AGAGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAGCTGTG--TTGA-GAGGAATCTGTA
gi|112110 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TA----TGTATGTTACCATAACA---------TAGAATTATCTGTA--TTGA-GGGGAACCTGTA
gi|112111 : AGGGGAATCAGTAGAACCA-T---------------------C--------TT-TG----CATATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCAGTA
gi|112112 : AGGGAAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATTACA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112113 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112114 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTGCCATAACA---------TATACATAACTGTG--TTAA-GGGGAATCTG
gi|112115 : AGGGGAATCTGTAAAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAAC-----------ATACTTATCTGTG--TTGA-GGGGAATC
gi|112116 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTACCAAAACA---------TATACATAACTGTG--TTAA-GGGG-ATCTG
gi|112117 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCTTGACA---------TATACTTATCTGTG--TTGA-AGGGAATCTTTA
gi|112118 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATCTATG--TTGA-GGGGAATGTG
gi|112119 : AGGGGAATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATATTAACCTGTG--TCAA-GGGTAATCTGTA
gi|112120 : AAGGGGATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATACATAACTGCG--TTGA-GGGGAATCAGTA
gi|112121 : AGGGGAATCTGTAGAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112122 : AGGGGATTCTGTAGAATCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112123 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TATACATAACTATG--TTGA-GGGGTATCTGTA
gi|112124 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTATA--TTGA-GGGGATTCTGTA
gi|112125 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112126 : AGGGGTATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CCGA-GGGTAATCTGTA
gi|112127 : AGGGTAATCTGTAGAACCA-C---------------------A--------TT-AG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTG
gi|112128 : AGGGTAATCTGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTCA-GGGGAATCAGTA
gi|112129 : AGGGGAATCAGTAGAACCAAT---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112130 : AGGGGAATCTGTAGAACCA-A---------------------T--------TT-TG----TGTATGATACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112131 : AGGGGATTCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTAGCTGTG--TCAA-GGGTAATCTGTA
gi|112132 : AGGGGAATCAGTAGAACCC-C---------------------G--------TT-TC----TGTATGTTACCATGACA---------TATACATAACTGTT--TTGA-CGGGAATCTGTA
gi|112133 : AGGGGAATCTGTAAAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACATAACTGTA--TTAA-GGGTAATCTGTA
gi|112134 : AGGGGAATCAGTAGACCCC-CCCCCCCCCACACACACACACCC--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112135 : AGGGTAATCAGTAGAACCC-C---------------------CCCCCCCCCTT-TG----CGTATGTTACCATAACA---------TATACATAACTGTA--CTAA-GGGTAATCTGTA
gi|112136 : AGGGGAATCTGTAGAACCA-C---------------------T--------TT-TG----CATCTGATACCATGACA---------TACACTGATATGTG--TTGA-AGGGAATCTGTA
gi|112137 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTT
gi|112138 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112139 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTATTTGTG--TTGA-GGGGAATCTGTA
gi|112140 : GGGGAATATGCAGAACCA-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--GTGA-GGGAAATGTGTA
gi|112141 : GAGGAATCAGTAAAACCT-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112142 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTATA
gi|112143 : GGGGAATCAGTAGATCCT-C---------------------C--------TT-T-----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-CGGGAATCTGTA
gi|112144 : GGGTAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATCTTAACATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112145 : GAGGAATCAGTAGAACCC-C---------------------C--------CTCTT----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-AGGGAATCTGTA
gi|112146 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTA---NNN--NNNN-NNNGAATCAGTA
gi|112147 : GGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTGTTTTG--GGGGAATCTGTA
gi|112148 : GGGAGTCAGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112149 : GGGAATCGGCAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCAGAACA---------TATACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112150 : GGGAATCAGTAGAACCA-C---------------------G--------TT-TG----CATATGTTACTATAACA---------TACACTTATCTGTG--TTGA-ATGGAATCTGTA
gi|112151 : GGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAATT---------TACACTGATCTGTG--TTGA-GGGGATTCTGTA
gi|112152 : GAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGTAATCTGTA
gi|112153 : ATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATGCTTATCTGTG--TTGA--GGGAATCTGTA
gi|112154 : TCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112155 : T-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCAGTA
gi|112156 : GTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
Alignments
lowQualScore : 1 11 333333333333333333333 11111111 0 0000 111111111 00 0
lowQualScore : . .. ..................... ........ . .... ......... .. .
lowQualScore : 5 77 555555555555555555555 99999999 4 9999 666666666 66 4
consensus : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
Reference ( family-312 ) : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112059 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112060 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTACCTGTT--TTGA-GGGGAATCTGTA
gi|112061 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112062 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TC----TGTATGTTACCATAACC---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112063 : AGGGGAATAAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAGCA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112064 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTATG--TTGA-GGGGAATCTGTA
gi|112065 : AGGGGAATCAGTAGAGCCT-C---------------------A--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112066 : AGGGGAATCAGTAGAGCCT-T---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAATTATCTGTG--TTGA-GGGGAATCAGTA
gi|112067 : AGGGGAATCTGTAGAACTC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTAA-GGGGAATCAGTA
gi|112068 : AGGGGAATCTGTAGAACCC-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTATG--TTGA-GGGGAATCAGTA
gi|112069 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTACGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112070 : AGGGCAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACAAATCTGTG--TTGA-GGGGAATCTGTA
gi|112071 : AGGGGAACCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATATATAACTGTG--TTGA-GGGCAATCTGTA
gi|112072 : AGGGAAATGTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112073 : AGGGAAATCAGTAGAAACT-C---------------------C--------TT-TG----TGTATGTTACTATAACA---------TATACATAACTGTG--TTGA-GGAGAATCTGTA
gi|112074 : AGGGGAAACAGTAGAACCC-C---------------------C--------TT-TG----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112075 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATACTTATCAATG--TTGA-GGGGAATATGTA
gi|112076 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAAATAACTGTG--TTTAGGGGGAATCTGTA
gi|112077 : AGGGGAATCAGAAGAACCT-C---------------------C--------TG-TG----TGTATGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112078 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATAATTATCAGTG--TTGA-GGGGAATATGTA
gi|112079 : AGGGGAATCTGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACTATATCA---------TATACTTATCAGTG--TTGA-GAGGAATATGTA
gi|112080 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCCTAACA---------CATACTTGTCAGTG--TTGG-GGGGAATATGCA
gi|112081 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAAAA---------AATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112082 : AGGGGAATTAGTTGAACCC-G---------------------C--------TT--G----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112083 : AGGAGAATCTGTAGAGCCT-C---------------------C--------TT-TG----CATCTGATATCATGACA---------TACACTAATCTGTG--TTGA-GGGGAATCTGTA
gi|112084 : AAGGGAATCAGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACCATAACA---------TACACATAACTGTG--TATA-GGGG
gi|112085 : AGGGGAAACAGTAGAACTT-C---------------------C--------TT-TG----TGTATGTTTCCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112086 : AGGGGAATCAGTAGACCCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112087 : AGGGGAATCGGTAGAACCC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TATACTCATCTGTA--TTGA-GGGGAATCTGTA
gi|112088 : AGGGGAATCAGTCGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTATCTGTA--TTTA-GGGGAATCTGTA
gi|112089 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCTTAACA---------TGTACTTATCTGTG--TTGA-GGGAAATCTATA
gi|112090 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACG---------TATACTTATCTGTG--TTGA-GGGGAATCAGT
gi|112091 : AGGGGAATCAGTACAACCT-C---------------------C--------TT-TG----TGTATATTACCATAACA---------TATACATATCTGTG--TTGA-GGGAAATCTG
gi|112092 : AGGGGAATCAGTAGCACCG-C---------------------G--------TT-TG----TGTATGTTACCATAACA---------TATACTTATATGTG--TTAA-GGGGAATCTG
gi|112093 : AGGGGAATCAGTTAAATCT-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TGTACTTATCTGTG--TTGA--GTGAATCTGTA
gi|112094 : AGGGGAATCAGTAGAACCA-C---------------------C--------TT-TG----CATATCTTACCATAACA---------TATACTTAGCTGTA--TTGA-GGGGAATCAGTA
gi|112095 : AGGGGTATCGGTAAAAACC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTAGCTGTA--TTGA-AAGAAATCTGTA
gi|112096 : AGGGGAGTCAGTAGAACCC-C---------------------C--------TT-TGTTTGTGTATGTTATAGTAACA---------TGTACTTAGCTGTG--TTGA-GGGGAATCTGTA
gi|112097 : AGGGGAATCAGTAGACCTC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TTTCTTTATCTGTT--TTGA-GGGGAATCCGTA
gi|112098 : AGGGGAATCAGTAAAACTA-A---------------------C--------TT-TG----TGTATGTTACCATAA-A----------ATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112099 : AGGGGAATTAGTAGAACCT-T---------------------C--------TT-TG----CATATGTTACCAAAACA---------TATACTTACCTGTG--ATGA-TGGGAATCAGTA
gi|112100 : AGGGGAATCAGTAGACCCA-C---------------------C--------TT-TG----CATGTTTTACCATTACA---------TATACTTATCTGTG--TTGA-GGGGAAACAGTA
gi|112101 : AGGGGAATCAATAGAACCC-C---------------------C--------TT-TG----TTTATGTTACCATAACATAATATTATTATACTTATCAG-G--TTGA-GGGGAATCAGTA
gi|112102 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATATATG--TTGA-GGGGAATCTGTA
gi|112103 : AGGGGAATCAATACAACCC-C---------------------C--------TT-TG----TGTATATAATCATAACA---------TTTACTAATCTGTG--CTGA---GGAATCAGTA
gi|112104 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112105 : AGGGGAATCAGTAGAACCC-C---------------------A--------TT-TA----TGTATGTTACCATACCA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112106 : AGAGGAATCAGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TCGA-GGGTAATCTGTA
gi|112107 : AGGGGAATCAGTAGAACCG-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112108 : AGGGGAATCTGTAGAACCC-C---------------------CA-------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGAAATCTGTA
gi|112109 : AGAGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAGCTGTG--TTGA-GAGGAATCTGTA
gi|112110 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TA----TGTATGTTACCATAACA---------TAGAATTATCTGTA--TTGA-GGGGAACCTGTA
gi|112111 : AGGGGAATCAGTAGAACCA-T---------------------C--------TT-TG----CATATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCAGTA
gi|112112 : AGGGAAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATTACA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112113 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112114 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTGCCATAACA---------TATACATAACTGTG--TTAA-GGGGAATCTG
gi|112115 : AGGGGAATCTGTAAAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAAC-----------ATACTTATCTGTG--TTGA-GGGGAATC
gi|112116 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTACCAAAACA---------TATACATAACTGTG--TTAA-GGGG-ATCTG
gi|112117 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCTTGACA---------TATACTTATCTGTG--TTGA-AGGGAATCTTTA
gi|112118 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATCTATG--TTGA-GGGGAATGTG
gi|112119 : AGGGGAATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATATTAACCTGTG--TCAA-GGGTAATCTGTA
gi|112120 : AAGGGGATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATACATAACTGCG--TTGA-GGGGAATCAGTA
gi|112121 : AGGGGAATCTGTAGAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112122 : AGGGGATTCTGTAGAATCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112123 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TATACATAACTATG--TTGA-GGGGTATCTGTA
gi|112124 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTATA--TTGA-GGGGATTCTGTA
gi|112125 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112126 : AGGGGTATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CCGA-GGGTAATCTGTA
gi|112127 : AGGGTAATCTGTAGAACCA-C---------------------A--------TT-AG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTG
gi|112128 : AGGGTAATCTGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTCA-GGGGAATCAGTA
gi|112129 : AGGGGAATCAGTAGAACCAAT---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112130 : AGGGGAATCTGTAGAACCA-A---------------------T--------TT-TG----TGTATGATACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112131 : AGGGGATTCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTAGCTGTG--TCAA-GGGTAATCTGTA
gi|112132 : AGGGGAATCAGTAGAACCC-C---------------------G--------TT-TC----TGTATGTTACCATGACA---------TATACATAACTGTT--TTGA-CGGGAATCTGTA
gi|112133 : AGGGGAATCTGTAAAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACATAACTGTA--TTAA-GGGTAATCTGTA
gi|112134 : AGGGGAATCAGTAGACCCC-CCCCCCCCCACACACACACACCC--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112135 : AGGGTAATCAGTAGAACCC-C---------------------CCCCCCCCCTT-TG----CGTATGTTACCATAACA---------TATACATAACTGTA--CTAA-GGGTAATCTGTA
gi|112136 : AGGGGAATCTGTAGAACCA-C---------------------T--------TT-TG----CATCTGATACCATGACA---------TACACTGATATGTG--TTGA-AGGGAATCTGTA
gi|112137 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTT
gi|112138 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112139 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTATTTGTG--TTGA-GGGGAATCTGTA
gi|112140 : GGGGAATATGCAGAACCA-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--GTGA-GGGAAATGTGTA
gi|112141 : GAGGAATCAGTAAAACCT-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112142 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTATA
gi|112143 : GGGGAATCAGTAGATCCT-C---------------------C--------TT-T-----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-CGGGAATCTGTA
gi|112144 : GGGTAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATCTTAACATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112145 : GAGGAATCAGTAGAACCC-C---------------------C--------CTCTT----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-AGGGAATCTGTA
gi|112146 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTA---NNN--NNNN-NNNGAATCAGTA
gi|112147 : GGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTGTTTTG--GGGGAATCTGTA
gi|112148 : GGGAGTCAGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112149 : GGGAATCGGCAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCAGAACA---------TATACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112150 : GGGAATCAGTAGAACCA-C---------------------G--------TT-TG----CATATGTTACTATAACA---------TACACTTATCTGTG--TTGA-ATGGAATCTGTA
gi|112151 : GGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAATT---------TACACTGATCTGTG--TTGA-GGGGATTCTGTA
gi|112152 : GAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGTAATCTGTA
gi|112153 : ATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATGCTTATCTGTG--TTGA--GGGAATCTGTA
gi|112154 : TCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112155 : T-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCAGTA
gi|112156 : GTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
blockSeqs : A AA CCCCCCCCACACACACACACC CCCCCCCC TAATATTAT
blockSeqs : A T . A .
blockSeqs : A T . . .
blockSeqs : A T . . .
blockSeqs : T T . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : T T . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : T T . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : T T . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : A T . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : G C . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : A G . . .
blockSeqs : A T . . .
blockSeqs : G A . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A A . . .
blockSeqs : A T . . .
blockSeqs : A A . . .
blockSeqs : T C . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : A A . . .
blockSeqs : A C . . .
blockSeqs : A A . . .
blockSeqs : T G . . .
blockSeqs : T C . . .
blockSeqs : A A . . .
blockSeqs : A C . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : A A . . .
blockSeqs : T C . . .
blockSeqs : T C . . .
blockSeqs : T C . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : T C . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : A A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : A C . . .
blockSeqs : T A . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : T A . . .
blockSeqs : A T . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A A . . .
blockSeqs : G A . . .
blockSeqs : A A . . .
blockSeqs : T A . . .
blockSeqs : A C . . .
blockSeqs : A C . . .
blockSeqs : A T . . .
blockSeqs : .
blockSeqCons :
originalCons : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
finalCons : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
Alignments
lowQualScore : 1 11 333333333333333333333 11111111 0 0000 111111111 00 0
lowQualScore : . .. ..................... ........ . .... ......... .. .
lowQualScore : 5 77 555555555555555555555 99999999 4 9999 666666666 66 4
consensus : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
Reference ( family-312 ) : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112059 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112060 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTACCTGTT--TTGA-GGGGAATCTGTA
gi|112061 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112062 : AGGGGAATCAGTAGAGCCT-C---------------------C--------TT-TC----TGTATGTTACCATAACC---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112063 : AGGGGAATAAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAGCA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112064 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTATG--TTGA-GGGGAATCTGTA
gi|112065 : AGGGGAATCAGTAGAGCCT-C---------------------A--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGGAATCAGTA
gi|112066 : AGGGGAATCAGTAGAGCCT-T---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAATTATCTGTG--TTGA-GGGGAATCAGTA
gi|112067 : AGGGGAATCTGTAGAACTC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTAA-GGGGAATCAGTA
gi|112068 : AGGGGAATCTGTAGAACCC-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTATG--TTGA-GGGGAATCAGTA
gi|112069 : AGGGGAATCAGTAGAACCT-C---------------------C--------TT-TG----TGTACGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112070 : AGGGCAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACAAATCTGTG--TTGA-GGGGAATCTGTA
gi|112071 : AGGGGAACCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATATATAACTGTG--TTGA-GGGCAATCTGTA
gi|112072 : AGGGAAATGTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112073 : AGGGAAATCAGTAGAAACT-C---------------------C--------TT-TG----TGTATGTTACTATAACA---------TATACATAACTGTG--TTGA-GGAGAATCTGTA
gi|112074 : AGGGGAAACAGTAGAACCC-C---------------------C--------TT-TG----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112075 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATACTTATCAATG--TTGA-GGGGAATATGTA
gi|112076 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATAAATAACTGTG--TTTAGGGGGAATCTGTA
gi|112077 : AGGGGAATCAGAAGAACCT-C---------------------C--------TG-TG----TGTATGTTAGCATAACA---------TATATATAACTGTG--TTGA-GGGGAATCTGTA
gi|112078 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATATCA---------TATAATTATCAGTG--TTGA-GGGGAATATGTA
gi|112079 : AGGGGAATCTGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACTATATCA---------TATACTTATCAGTG--TTGA-GAGGAATATGTA
gi|112080 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCCTAACA---------CATACTTGTCAGTG--TTGG-GGGGAATATGCA
gi|112081 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAAAA---------AATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112082 : AGGGGAATTAGTTGAACCC-G---------------------C--------TT--G----TGTAGGTTTCCATAACA---------TGTACTTATCTGTG--ATGA-GGGGAATCTGTA
gi|112083 : AGGAGAATCTGTAGAGCCT-C---------------------C--------TT-TG----CATCTGATATCATGACA---------TACACTAATCTGTG--TTGA-GGGGAATCTGTA
gi|112084 : AAGGGAATCAGTAGAACCC-C---------------------C--------AT-TG----TGTATGTTACCATAACA---------TACACATAACTGTG--TATA-GGGG
gi|112085 : AGGGGAAACAGTAGAACTT-C---------------------C--------TT-TG----TGTATGTTTCCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112086 : AGGGGAATCAGTAGACCCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112087 : AGGGGAATCGGTAGAACCC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TATACTCATCTGTA--TTGA-GGGGAATCTGTA
gi|112088 : AGGGGAATCAGTCGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTATCTGTA--TTTA-GGGGAATCTGTA
gi|112089 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCTTAACA---------TGTACTTATCTGTG--TTGA-GGGAAATCTATA
gi|112090 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACG---------TATACTTATCTGTG--TTGA-GGGGAATCAGT
gi|112091 : AGGGGAATCAGTACAACCT-C---------------------C--------TT-TG----TGTATATTACCATAACA---------TATACATATCTGTG--TTGA-GGGAAATCTG
gi|112092 : AGGGGAATCAGTAGCACCG-C---------------------G--------TT-TG----TGTATGTTACCATAACA---------TATACTTATATGTG--TTAA-GGGGAATCTG
gi|112093 : AGGGGAATCAGTTAAATCT-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TGTACTTATCTGTG--TTGA--GTGAATCTGTA
gi|112094 : AGGGGAATCAGTAGAACCA-C---------------------C--------TT-TG----CATATCTTACCATAACA---------TATACTTAGCTGTA--TTGA-GGGGAATCAGTA
gi|112095 : AGGGGTATCGGTAAAAACC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTAGCTGTA--TTGA-AAGAAATCTGTA
gi|112096 : AGGGGAGTCAGTAGAACCC-C---------------------C--------TT-TGTTTGTGTATGTTATAGTAACA---------TGTACTTAGCTGTG--TTGA-GGGGAATCTGTA
gi|112097 : AGGGGAATCAGTAGACCTC-C---------------------C--------TT-TG----TATATGTTACCATAACA---------TTTCTTTATCTGTT--TTGA-GGGGAATCCGTA
gi|112098 : AGGGGAATCAGTAAAACTA-A---------------------C--------TT-TG----TGTATGTTACCATAA-A----------ATACTTATCTGTG--TTGA-GGGGAATCAGTA
gi|112099 : AGGGGAATTAGTAGAACCT-T---------------------C--------TT-TG----CATATGTTACCAAAACA---------TATACTTACCTGTG--ATGA-TGGGAATCAGTA
gi|112100 : AGGGGAATCAGTAGACCCA-C---------------------C--------TT-TG----CATGTTTTACCATTACA---------TATACTTATCTGTG--TTGA-GGGGAAACAGTA
gi|112101 : AGGGGAATCAATAGAACCC-C---------------------C--------TT-TG----TTTATGTTACCATAACATAATATTATTATACTTATCAG-G--TTGA-GGGGAATCAGTA
gi|112102 : AGGGGAATCTGTAAAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATATATG--TTGA-GGGGAATCTGTA
gi|112103 : AGGGGAATCAATACAACCC-C---------------------C--------TT-TG----TGTATATAATCATAACA---------TTTACTAATCTGTG--CTGA---GGAATCAGTA
gi|112104 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112105 : AGGGGAATCAGTAGAACCC-C---------------------A--------TT-TA----TGTATGTTACCATACCA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112106 : AGAGGAATCAGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TCGA-GGGTAATCTGTA
gi|112107 : AGGGGAATCAGTAGAACCG-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112108 : AGGGGAATCTGTAGAACCC-C---------------------CA-------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CTGA-GGGAAATCTGTA
gi|112109 : AGAGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAGCTGTG--TTGA-GAGGAATCTGTA
gi|112110 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TA----TGTATGTTACCATAACA---------TAGAATTATCTGTA--TTGA-GGGGAACCTGTA
gi|112111 : AGGGGAATCAGTAGAACCA-T---------------------C--------TT-TG----CATATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCAGTA
gi|112112 : AGGGAAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATTACA---------TAAACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112113 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112114 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTGCCATAACA---------TATACATAACTGTG--TTAA-GGGGAATCTG
gi|112115 : AGGGGAATCTGTAAAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAAC-----------ATACTTATCTGTG--TTGA-GGGGAATC
gi|112116 : AGGGGAATCAGTAGAACCC-C---------------------T--------TT-T-----TGTATGTTACCAAAACA---------TATACATAACTGTG--TTAA-GGGG-ATCTG
gi|112117 : AGAGGAATCTGTAGAACTC-A---------------------C--------TT-TG----TTTATGTTACCTTGACA---------TATACTTATCTGTG--TTGA-AGGGAATCTTTA
gi|112118 : AGGGGAATCTGTAGAACCC-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TACACTTATCTATG--TTGA-GGGGAATGTG
gi|112119 : AGGGGAATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATATTAACCTGTG--TCAA-GGGTAATCTGTA
gi|112120 : AAGGGGATCTGAAAAACCA-C---------------------C--------TT-TG----TGTATGTTGCCATAACA---------TATACATAACTGCG--TTGA-GGGGAATCAGTA
gi|112121 : AGGGGAATCTGTAGAACTA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TACACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112122 : AGGGGATTCTGTAGAATCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112123 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCGTAACA---------TATACATAACTATG--TTGA-GGGGTATCTGTA
gi|112124 : AGGGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTATA--TTGA-GGGGATTCTGTA
gi|112125 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TTTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112126 : AGGGGTATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--CCGA-GGGTAATCTGTA
gi|112127 : AGGGTAATCTGTAGAACCA-C---------------------A--------TT-AG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTG
gi|112128 : AGGGTAATCTGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTCA-GGGGAATCAGTA
gi|112129 : AGGGGAATCAGTAGAACCAAT---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112130 : AGGGGAATCTGTAGAACCA-A---------------------T--------TT-TG----TGTATGATACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112131 : AGGGGATTCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACTTAGCTGTG--TCAA-GGGTAATCTGTA
gi|112132 : AGGGGAATCAGTAGAACCC-C---------------------G--------TT-TC----TGTATGTTACCATGACA---------TATACATAACTGTT--TTGA-CGGGAATCTGTA
gi|112133 : AGGGGAATCTGTAAAACCA-C---------------------C--------TT-TG----TGTATGTTACCATGACA---------TATACATAACTGTA--TTAA-GGGTAATCTGTA
gi|112134 : AGGGGAATCAGTAGACCCC-CCCCCCCCCACACACACACACCC--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA
gi|112135 : AGGGTAATCAGTAGAACCC-C---------------------CCCCCCCCCTT-TG----CGTATGTTACCATAACA---------TATACATAACTGTA--CTAA-GGGTAATCTGTA
gi|112136 : AGGGGAATCTGTAGAACCA-C---------------------T--------TT-TG----CATCTGATACCATGACA---------TACACTGATATGTG--TTGA-AGGGAATCTGTA
gi|112137 : AGGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTT
gi|112138 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTACCTGTG--TTGA-GGGGAATCTGTA
gi|112139 : GGGGAATCTGTAGAACCA-C---------------------C--------TT-TG----CATCTGATACCATGACA---------TATACTTATTTGTG--TTGA-GGGGAATCTGTA
gi|112140 : GGGGAATATGCAGAACCA-C---------------------T--------TT-TG----TGTATGTTTCCATTACA---------TATACTTATCTGTG--GTGA-GGGAAATGTGTA
gi|112141 : GAGGAATCAGTAAAACCT-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112142 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTAACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTATA
gi|112143 : GGGGAATCAGTAGATCCT-C---------------------C--------TT-T-----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-CGGGAATCTGTA
gi|112144 : GGGTAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATCTTAACATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112145 : GAGGAATCAGTAGAACCC-C---------------------C--------CTCTT----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-AGGGAATCTGTA
gi|112146 : GAGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTA---NNN--NNNN-NNNGAATCAGTA
gi|112147 : GGGAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATACATAACTGTGTTTTG--GGGGAATCTGTA
gi|112148 : GGGAGTCAGTAGAACCA-C---------------------T--------TT-TG----TGTATGTTACCATAACA---------TATACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112149 : GGGAATCGGCAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCAGAACA---------TATACTTATCTGTG--TTGA-GAGGAATCTGTA
gi|112150 : GGGAATCAGTAGAACCA-C---------------------G--------TT-TG----CATATGTTACTATAACA---------TACACTTATCTGTG--TTGA-ATGGAATCTGTA
gi|112151 : GGGAATCTGTAGAACCA-C---------------------C--------TT-TG----TGTATGTTACCATAATT---------TACACTGATCTGTG--TTGA-GGGGATTCTGTA
gi|112152 : GAATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGTAATCTGTA
gi|112153 : ATCAGTAGAACCC-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TATGCTTATCTGTG--TTGA--GGGAATCTGTA
gi|112154 : TCAGTAGAACCT-C---------------------C--------TT-TG----TGTATGTTACCATAACA---------TTTACTTATCTGTG--TTGA-GGGGAATCTGTA
gi|112155 : T-TG----TGTATGTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCAGTA
gi|112156 : GTTACCATAACA---------TATACATAACTGTG--TTGA-GGGGAATCTGTA