lowQualScore : 0 0 0 0 0 555 0 0 55555 0000
lowQualScore : . . . . . ... . . ..... ....
lowQualScore : 4 4 4 4 4 777 4 4 55555 9999
consensus : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
Reference ( gi|42145 ) : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GC--CCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42146 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GC--CCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42149 : AATACTTGGCTCGAACAACCC-TT-ACC-TCG-AATTATTTT-GC--CCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42148 : AATACTTAGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CGAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42150 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTTT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42151 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGCCGGGTTCG-AG----C----TATCGAA
gi|42152 : AATACTTGGCTCGAACAACCC-TT-AAA-TCG-AACTAGTTT-GC--CCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42147 : AATACTTGGCTCAAACAACCC-TT-AAC-TCA-AACTATTTT-GT--CCAGTCC-CTTCGTGTTCG-AA----C----CATCGAA
gi|42155 : AGTACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGTTGGGTTCG-TG----C----CATCG
gi|42156 : AGTATTTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CTAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42157 : AACACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GT--CCAGTCT-CGTCGGGTTCG-AG----C----CATCGAA
gi|42154 : AATACTTGGCTTTAACAACCC-TT-AAG-TCA-AACTATTTT-GT--CCAGTCC-CATCGGGTTCG-AA----C----CATCGAA
gi|42158 : AATACTTGGCTCAAACAACCC-TT-AAC-ACG-AACTATTTT-GC--CCAGTTC-CGTCAGGTTCG-AG----C----CTTCGAA
gi|42160 : AATACGTGGCTCGCACAACCC-TT-AAC-TCG-AACTATTTT-TC--CTAGTCC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42159 : AATATTTGGTTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGTCGGATTCG-AG----C----CATCGGA
gi|42161 : AATAATTGGCTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----TATC
gi|42164 : AATACTTGGCTTGAACAACCC-TT-AAC-TCG-AACTATTTT-AT--GAAGTCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42163 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATATT-GT--CCGGACC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42165 : AATACTTGGTTCGAACAATCC-TT-AAC-TCG-AAGTATTTT-AT--CCAGTCC-AGTCGGGTTCG-AA----T----CATCGAA
gi|42167 : AATATTTGGGTCGAACATCCC-TT-AAC-TCG-AACTATTTT-GC--CCAGTCC-CGTCGGGTTCA-AA----T----TATCAAA
gi|42166 : AATACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GT--CCAGTCC-GGTCAGGTTCG-AG----C----CATCGA
gi|42168 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTAATTT-GT--CCAGTCC-CATCGGGATCG-AG----C----CA-CGAA
gi|42169 : AATACCTGGCTCGAACAACCC-AT-AAC-TCG-AACTAGTTT-GT--CCAGTCC-CGTCTGGTTCG-AG----C----CACCGAA
gi|42172 : AATACTCAGCTCGAACAACCC-TT-CAC-TCG-AACTATATT-GG--CCAATCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42173 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTGT-GT--CGAATCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42174 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACAGTTTT-GT--CCAGTCC-AGCCAGGTTCG-AG----C----CATCGGA
gi|42175 : AATACTTGGCTGGAACAACCC-TT-AAC-TTG-AACTATTTT-GT--ACAGTCC-TGTCGGGTTCA-AG----C----CATTGAA
gi|42177 : AATACTTGGCTCAAACAACCT-GT-AAT-TCG-AACTGTTTT-GT--CCAGTCC-TGTCGGGTTCG-AG----C----TATCGAA
gi|42179 : AATGCTTGGCTCGAACAACCC-TT-AAG-TCG-AACAATTTT-GT--ACAGTCC-TGTTGGGTTCG-AG----C----CATCGAA
gi|42180 : AATACTTGGCTCAAACAACAC-TT-AAC-TCG-AACTATTTT-GT--CAAATCC-CGTCGGGTTCG-TG----T----CATCGAA
gi|42184 : AATATTTGGCTCGAACAACCC-TT-AAT-TCG-AATTATTTT--C--CCTGTCC-CGTCGGGCTCA-AG----C----CATCGAA
gi|42182 : AGTACTTGGCTCAAACAACCC-TT-CAG-TTG-AACTATTTT-GT--CCAGCCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42162 : AATACTTGGCTCGAACAACCC-CT-AAC-TCA-AACTATTGT-GT--CCAATCC-CGTCAGGTACA-AG----C----CATCGAA
gi|42185 : AATATTTGGCTCGAATAACCC-TT-AGC-TCG-TACTATTTT-GT--TCAGTCT-CTTCGGGTTCG-AG----C----CATCGAA
gi|42186 : AATACTTGGCTCAAACAACCA-TT-AAC-TTG-AACTATTTT-GT--CCTGTCC-TGTCGAGTTCA-AG----C----CATCGAA
gi|42187 : AATACTTAGCTCGAACATCCC-TT-AAC-TCG-AACTACTTT-GA--CCAATCC-CGTCAGGATCG-AG----C----CATCGA
gi|42170 : AATACTTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GT--CCAATCC-TGTCAGGTTAG-AG----C----CACCAAA
gi|42171 : AATATTTGGCTCGAACAACCC-TT-AAC-TCA-AACTATTTT-GT--CCAGTCC-CGTCTGGTTCA-AG----C----AAT
gi|42188 : AATATTTGACTCGAACAACCC-TT-AAG-TCG-AACTATTTT-GT--CCAGCCC-CGCCGGGTTTG-AG----T----CATCG
gi|42190 : AATATTTGGCTCGAACAACCC-TT-AAG-CCG-AACTATTAT-TT--CCAGTCC-TGTCGGGTTCG-AG----T----CATCGAA
gi|42189 : AATACTTAGCTCGAGCAACCC-T--AATGTCG-AATTATTTT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42192 : AATACTTGTCTCGAACAACCA-TT-AAC-TCG-AACTAGTTT-GT--CCAGTCC-CGTAGGATTCA-AG----C----TATCGAA
gi|42191 : AATGCTTGGCTCAAACAACCC-TT-AAC-TCG-AACTAATTT-GT--CCAGTCC-CATTGGGTTTG-AG----C----CTTTGAA
gi|42176 : AATATTTGGCTCGAACAACAC-TT-AAT-TCA-AACTATTTT-AT--CCAGTCC-CGTCGGGTTTG-AG----C----CAACAAA
gi|42194 : AATATTTGGTTCGAACAACCC-TT-AGC-TCG-AACTA-TTA-GT--CCAGTCC-GATCGGGTTCG-AG----C----CATCGAA
gi|42178 : AATACTTGGCTCAAACAACCT-TT-AAC-ACA-AACTATTTT-GT--CTGGTTC-CATTGGGTTCG-AG----C----CATCGAA
gi|42197 : AATACTTGGCTGGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CCATTCC-TGTTGGAGTCG-AA----C----TGTCAAA
gi|42196 : AATACTTGGCTCGAATAACC--TT-AAC-TCG-AACTATTGT-GT--TAAGTCC-CGTCGGGTTCG-AG----CTATTCATCGAA
gi|42198 : AATATTTGACTTGAACAACCC-TT-AAC-TTG-AACTA-TTT-GT--CCAGTCC-TGTCGGGTTCG-AG----A----CATTGAA
gi|42202 : AAGACATGGCTGGAACAACCT-TT-AAC-TAG-AACTATTTT-GT--CCTGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42200 : AATACTTGACTCGAACAACCA-TT-ATT-TCG-AACTATTTT-GT--CCAGCCT-CGTCTGGTTCG-AG----C----CATCG
gi|42183 : AATGTTTGGCTTGAACAACCT-TT-AAC-TCA-AATTATTTT-GT--CCAGTCC-TGTCAGGTTCA-AG----C----CACCGAA
gi|42204 : AATACTTTGCTCGAACAATCT-TT-AG--TCG-AACTGTTTT-GT--CCAGTCC-TGTCGGGTTCG-CG----C----CATCGAA
gi|42205 : AATACTTGACTCGAATAAACC-AT-AAC-TCG-AACTAGTTT-GT--CAAGTCC-CATCGGGTTCG-GG----C----CATCGAA
gi|42207 : AATATTTGGCTTAAACAACCC-TT-AGC-GTG-AACTATTTT-GT--TCAGTCC-CGTCAGGTTCA-AG----C----TATCGAA
gi|42208 : AATACTTGGCTCAAACAATCC-T--AAC-TCG-AATTATTTT-GT--TTAGTCC-CGTCGTGTTCG-AG----C----CGTTGAA
gi|42209 : AATATTTTGCCCGAAAAACCC-TTTAAC-TCG-AACAATTTT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----CACCCAA
gi|42211 : AATACATTGATCGAACAACCC-TT-AAC-TCG-AACTATTTT-AT--TCAATCC-CGTCGGTTTCG-AT----C----TATCGAA
gi|42213 : AATGCTTGGGTCGAACAACAC-TT-AGC-TCG-AACTTTTGT-GT--CCAGTCC-TGCCGGGTTCG-AG----C----CATCAAA
gi|42212 : AATGCGTGGCTCGAACAAGCT-TC-AAC-TTG-AACTATTTTTGT--TCAGTCC-CGTTGGGTTCG-AG----C----CATCGA
gi|42215 : AATACTTGACTCGAGCAACAT-TT-AAC-TCG-AACTATTTA-GT--CCAGTCC-TGTCGCGTTCG-AGTCATC----CATCGAA
gi|42216 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-GACTATTTT-TT--CCAGACTACGTCTGATTCG-AG----C----CATTAAA
gi|42214 : AATAGTTGGCTCGAACAACAC-TT-AAC-TCG-GACTA-CTT-GT--CCACTCC-CGTCGGGTTAG-AG----C----CACCGAA
gi|42218 : AATATTTGGCTTGAACAGCCT-TT-AAC-TCG-AACTA-TTT-GT--CCAGTCC-CGTCGGACTGT-AA----C----CATCG
gi|42219 : AATATTTGGCTCGAAAAACTC-TT-TAC-TCG-AACTATTGT-GT--CCAGTCT-CGTCGGGTTCG-AG----C----AA-CGAA
gi|42195 : AATATTTGGCTTGAACAACTC-TT-AAC-TCA-AACTAACTT-AT--TCAGTCC-CATTGGGCTCG-AG----C----CATCGAA
gi|42222 : AATATTTAGCTCGAACAACCT-TT-AAA-TCG-AACTATTTC-G---TCGGGCC-CGTCCGGTTCG-AG----C----CATCGAA
gi|42223 : AATACTTGGCTCT--CAACCC-TT-AAC-TCG-AACCATTTT-GT--CCAATCT-CTTCGTATTCG-AG----C----CATCGAA
gi|42199 : AATACTTGGCTCAAACAACCC-TT-AAG-TCA-AACTATATT-GT--CCAGTCC-AGTCAGGTTCA-AG----C----TATTGGA
gi|42224 : AATATTTGACTCGAACAACCA-T--AAT-TCG-AACAATTTT-GT--CTAGTCT-CGTCGGGTTCG-AG----T----CATCGA
gi|42203 : AATACTTGGCTTGAACAACCA-TA-AAG-TCA-AACTATTTT-GT--CCTGTCC-CGTCGTGTTTG-AG----C----CATCAAA
gi|42227 : AATACTTGACTCGAACAACCG-TT-AAC-TCG-AACTATTTT-AT--CCAGTTC-CGCGGAGTTCG-AG----C----TA
gi|42226 : AATACTTGGCTCGAATAACCC-TT-TAC-TCG-AGC--TTTT-GCGTTCAGTCC-CATCTGGTTTG-AA----C----CACCGAA
gi|42206 : AATACTTGGCCTAAACAACTT-TT-AAC-TCA-AACTAATTT-GT--CCTGTCC-CGTCGGATTCG-AG----T----CATCAAA
gi|42210 : AGTATTTGGCTTGAACAACCC-TT-AAC-TCA-AACTAATCT-GT--CCAGTCC-TGTTGGATTCA-AG----C----CAT
gi|42225 : AATATATGGCTCAAACAACCC-TT-AAT-T----ACTATTTT-GT--CCAGTCC-CAGCAGGTTCG-AG----C----CATTGAA
gi|42217 : AATGTCTGGCTCAATCAACCC-TT-AAC-TCA-AACTA-TTT-GT--CCAGTCC-TGTTGGATTCG-AG----C----CATTGA
gi|42220 : AATACTTGACTGGAACAACCC-TT-AAC-TCA-AACTATTTT-AT--CTTGTAC-CGGCGGGATCG-AG----C----CAGCGAA
gi|42270 : ATACTTGGCTCGAACAACC--TT-AAC-TCG-AACTATTTT-GT--CTAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42272 : ATACTTGACTCAAACAACCC-TT-AAC-TGG-AACTATTTT-GT--CCAGTCC-CATTGGGTTTG-AT----C----TATCGAA
gi|42271 : ATATTTGGCTCGAACGACCC-TT-AAC-TCA-AACTATTTT-GT--CAAGTCT-CGTCGTGTTCT-AA----C----CATCAAA
gi|42273 : ATACTTGACTCGAACAACAC-TT-AGC-TCG-AACTATTTT-GT--CAAGTCC-CATCGGGTTCG-CG----C----AATCGAA
gi|42274 : ATACTTGACTCGAA-AACCC-TC-AAC-TCG-AACTATTTT-GT--CTAGTCC-CGTCGTGTTGG-AG----C----TCTCGAA
gi|42275 : ATACTTGGCTTGAACAACGC-TT-AAC-TCGGAACTGTTTT-AT--CCAGTCC-AGTCGGGTACA-AG----C----CATCAAA
gi|42282 : TACTAGGCTCGAACAACCC-TT-TGC-TCG-AACTATTTT-GG--TCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42283 : TACTTGGATCGAACAACCC-TA-AAC-TCG-AACTATTTT-GT--CCAGTCC-CGTCGAGTTCG-AC----C----AATCGAA
gi|42284 : TACTTGGCTCGAATAACCC-TT-GAC-TCA-AACTATTTT-GT--CTAATCA-TGTCGGGTTCG-AG----C----CATTGAA
gi|42286 : TACTTGGATCGAACAACCC-TT-ATT-TCG-AATTATTAT-GT--CCAGTCC-CGTCGGGTTCG-AG----C----TATCG
gi|42287 : TACTTGGCTCGAACTACCC-TT-AAA-TCG-AACTATTTT-GT--CCAGTGT-CATTGGGTTTG-AG----C----CATCGA
gi|42288 : TATTTGGCTCAAACAACTC-TT-AAT-TCG-AAATGTTTT-TT--CCAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42290 : TACTTGGCTCGAACAACCCTTT-AAC--CG-AACTATTTT-GT--CGAGCCC-CATCGTGTTCG-AG----C----CACCGAA
gi|42285 : TACTTAGCTCGAACAACCC-TT-AAC-TCA-AACTTCTTT-GT--CCAGTCC-CATCAGGTTTT-AG----C----CATCGGA
gi|42289 : TACTTGGTTCTAACAACCC-TT-AAC-TCA-AACTA-TTT-GT--CCAGTCC-TGTCTGATTC--AA----C----CGTCGAA
gi|42291 : TACTTGACTCGAACAACCT-GT-AAC-TCA-AACTATTTT-GT--CCAGTTC-CGTTCAGTTCGCAA----------ATCGAA
gi|42294 : ACTTGGCTCGAACAACCC-TT-AAC-TCG-GTCTATTTT--C--CCAGTCC-CGTCGGGTTCG-AG----C----AATTGAA
gi|42298 : CTTGGCTGGAACAACCC-TT-GAC-TCG-AACTATTTT-GT--CCATTCC-CATCTGGTTTG-AG----C----CATCGAA
gi|42305 : TTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GT--CCAGTCC-CGTCGGGTTCT-AG----C----CATCGAA
gi|42307 : TTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GT--CTCGTCC-CATCGAGTTCA-AG----T----CATCGAA
gi|42306 : TTGGCTTGAACAACCT-TT-AAC-TTA-TATTAGTTT-GT--CCAGTCC-CGTCGGGTTCT-AG----C----CATCGA
gi|42309 : TGTCTTGAACAACCC-TT-AAC-CTT-AACTATTTT-GT--CTAGTCC-CGTCGGGTTCA-AG----C----CATCGAA
Alignments
lowQualScore : 0 0 0 0 0 0 0 0000 0000
lowQualScore : . . . . . . . .... ....
lowQualScore : 4 4 4 4 4 4 4 8888 8888
consensus : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
Reference ( family-197 ) : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42145 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42146 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42147 : AATACTTGGCTCAAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CTTCGTGTTCG-AA----C----CATCGAA
gi|42148 : AATACTTAGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCGAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42149 : AATACTTGGCTCGAACAACCC-TT-ACC-TCG-AATTATTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42150 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42151 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGCCGGGTTCG-AG----C----TATCGAA
gi|42152 : AATACTTGGCTCGAACAACCC-TT-AAA-TCG-AACTAGTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42154 : AATACTTGGCTTTAACAACCC-TT-AAG-TCA-AACTATTTT-GTCCAGTCC-CATCGGGTTCG-AA----C----CATCGAA
gi|42155 : AGTACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTTGGGTTCG-TG----C----CATCG
gi|42156 : AGTATTTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42157 : AACACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCT-CGTCGGGTTCG-AG----C----CATCGAA
gi|42158 : AATACTTGGCTCAAACAACCC-TT-AAC-ACG-AACTATTTT-GCCCAGTTC-CGTCAGGTTCG-AG----C----CTTCGAA
gi|42159 : AATATTTGGTTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGATTCG-AG----C----CATCGGA
gi|42160 : AATACGTGGCTCGCACAACCC-TT-AAC-TCG-AACTATTTT-TCCTAGTCC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42161 : AATAATTGGCTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATC
gi|42162 : AATACTTGGCTCGAACAACCC-CT-AAC-TCA-AACTATTGT-GTCCAATCC-CGTCAGGTACA-AG----C----CATCGAA
gi|42163 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATATT-GTCCGGACC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42164 : AATACTTGGCTTGAACAACCC-TT-AAC-TCG-AACTATTTT-ATGAAGTCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42165 : AATACTTGGTTCGAACAATCC-TT-AAC-TCG-AAGTATTTT-ATCCAGTCC-AGTCGGGTTCG-AA----T----CATCGAA
gi|42166 : AATACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCC-GGTCAGGTTCG-AG----C----CATCGA
gi|42167 : AATATTTGGGTCGAACATCCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCA-AA----T----TATCAAA
gi|42168 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATCGGGATCG-AG----C----CA-CGAA
gi|42169 : AATACCTGGCTCGAACAACCC-AT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTCTGGTTCG-AG----C----CACCGAA
gi|42170 : AATACTTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAATCC-TGTCAGGTTAG-AG----C----CACCAAA
gi|42171 : AATATTTGGCTCGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCTGGTTCA-AG----C----AAT
gi|42172 : AATACTCAGCTCGAACAACCC-TT-CAC-TCG-AACTATATT-GGCCAATCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42173 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTGT-GTCGAATCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42174 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACAGTTTT-GTCCAGTCC-AGCCAGGTTCG-AG----C----CATCGGA
gi|42175 : AATACTTGGCTGGAACAACCC-TT-AAC-TTG-AACTATTTT-GTACAGTCC-TGTCGGGTTCA-AG----C----CATTGAA
gi|42176 : AATATTTGGCTCGAACAACAC-TT-AAT-TCA-AACTATTTT-ATCCAGTCC-CGTCGGGTTTG-AG----C----CAACAAA
gi|42177 : AATACTTGGCTCAAACAACCT-GT-AAT-TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-AG----C----TATCGAA
gi|42178 : AATACTTGGCTCAAACAACCT-TT-AAC-ACA-AACTATTTT-GTCTGGTTC-CATTGGGTTCG-AG----C----CATCGAA
gi|42179 : AATGCTTGGCTCGAACAACCC-TT-AAG-TCG-AACAATTTT-GTACAGTCC-TGTTGGGTTCG-AG----C----CATCGAA
gi|42180 : AATACTTGGCTCAAACAACAC-TT-AAC-TCG-AACTATTTT-GTCAAATCC-CGTCGGGTTCG-TG----T----CATCGAA
gi|42182 : AGTACTTGGCTCAAACAACCC-TT-CAG-TTG-AACTATTTT-GTCCAGCCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42183 : AATGTTTGGCTTGAACAACCT-TT-AAC-TCA-AATTATTTT-GTCCAGTCC-TGTCAGGTTCA-AG----C----CACCGAA
gi|42184 : AATATTTGGCTCGAACAACCC-TT-AAT-TCG-AATTATTTT--CCCTGTCC-CGTCGGGCTCA-AG----C----CATCGAA
gi|42185 : AATATTTGGCTCGAATAACCC-TT-AGC-TCG-TACTATTTT-GTTCAGTCT-CTTCGGGTTCG-AG----C----CATCGAA
gi|42186 : AATACTTGGCTCAAACAACCA-TT-AAC-TTG-AACTATTTT-GTCCTGTCC-TGTCGAGTTCA-AG----C----CATCGAA
gi|42187 : AATACTTAGCTCGAACATCCC-TT-AAC-TCG-AACTACTTT-GACCAATCC-CGTCAGGATCG-AG----C----CATCGA
gi|42188 : AATATTTGACTCGAACAACCC-TT-AAG-TCG-AACTATTTT-GTCCAGCCC-CGCCGGGTTTG-AG----T----CATCG
gi|42189 : AATACTTAGCTCGAGCAACCC-T--AATGTCG-AATTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42190 : AATATTTGGCTCGAACAACCC-TT-AAG-CCG-AACTATTAT-TTCCAGTCC-TGTCGGGTTCG-AG----T----CATCGAA
gi|42191 : AATGCTTGGCTCAAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATTGGGTTTG-AG----C----CTTTGAA
gi|42192 : AATACTTGTCTCGAACAACCA-TT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTAGGATTCA-AG----C----TATCGAA
gi|42194 : AATATTTGGTTCGAACAACCC-TT-AGC-TCG-AACTA-TTA-GTCCAGTCC-GATCGGGTTCG-AG----C----CATCGAA
gi|42195 : AATATTTGGCTTGAACAACTC-TT-AAC-TCA-AACTAACTT-ATTCAGTCC-CATTGGGCTCG-AG----C----CATCGAA
gi|42196 : AATACTTGGCTCGAATAACC--TT-AAC-TCG-AACTATTGT-GTTAAGTCC-CGTCGGGTTCG-AG----CTATTCATCGAA
gi|42197 : AATACTTGGCTGGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCATTCC-TGTTGGAGTCG-AA----C----TGTCAAA
gi|42198 : AATATTTGACTTGAACAACCC-TT-AAC-TTG-AACTA-TTT-GTCCAGTCC-TGTCGGGTTCG-AG----A----CATTGAA
gi|42199 : AATACTTGGCTCAAACAACCC-TT-AAG-TCA-AACTATATT-GTCCAGTCC-AGTCAGGTTCA-AG----C----TATTGGA
gi|42200 : AATACTTGACTCGAACAACCA-TT-ATT-TCG-AACTATTTT-GTCCAGCCT-CGTCTGGTTCG-AG----C----CATCG
gi|42202 : AAGACATGGCTGGAACAACCT-TT-AAC-TAG-AACTATTTT-GTCCTGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42203 : AATACTTGGCTTGAACAACCA-TA-AAG-TCA-AACTATTTT-GTCCTGTCC-CGTCGTGTTTG-AG----C----CATCAAA
gi|42204 : AATACTTTGCTCGAACAATCT-TT-AG--TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-CG----C----CATCGAA
gi|42205 : AATACTTGACTCGAATAAACC-AT-AAC-TCG-AACTAGTTT-GTCAAGTCC-CATCGGGTTCG-GG----C----CATCGAA
gi|42206 : AATACTTGGCCTAAACAACTT-TT-AAC-TCA-AACTAATTT-GTCCTGTCC-CGTCGGATTCG-AG----T----CATCAAA
gi|42207 : AATATTTGGCTTAAACAACCC-TT-AGC-GTG-AACTATTTT-GTTCAGTCC-CGTCAGGTTCA-AG----C----TATCGAA
gi|42208 : AATACTTGGCTCAAACAATCC-T--AAC-TCG-AATTATTTT-GTTTAGTCC-CGTCGTGTTCG-AG----C----CGTTGAA
gi|42209 : AATATTTTGCCCGAAAAACCC-TTTAAC-TCG-AACAATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CACCCAA
gi|42210 : AGTATTTGGCTTGAACAACCC-TT-AAC-TCA-AACTAATCT-GTCCAGTCC-TGTTGGATTCA-AG----C----CAT
gi|42211 : AATACATTGATCGAACAACCC-TT-AAC-TCG-AACTATTTT-ATTCAATCC-CGTCGGTTTCG-AT----C----TATCGAA
gi|42212 : AATGCGTGGCTCGAACAAGCT-TC-AAC-TTG-AACTATTTTTGTTCAGTCC-CGTTGGGTTCG-AG----C----CATCGA
gi|42213 : AATGCTTGGGTCGAACAACAC-TT-AGC-TCG-AACTTTTGT-GTCCAGTCC-TGCCGGGTTCG-AG----C----CATCAAA
gi|42214 : AATAGTTGGCTCGAACAACAC-TT-AAC-TCG-GACTA-CTT-GTCCACTCC-CGTCGGGTTAG-AG----C----CACCGAA
gi|42215 : AATACTTGACTCGAGCAACAT-TT-AAC-TCG-AACTATTTA-GTCCAGTCC-TGTCGCGTTCG-AGTCATC----CATCGAA
gi|42216 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-GACTATTTT-TTCCAGACTACGTCTGATTCG-AG----C----CATTAAA
gi|42217 : AATGTCTGGCTCAATCAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTTGGATTCG-AG----C----CATTGA
gi|42218 : AATATTTGGCTTGAACAGCCT-TT-AAC-TCG-AACTA-TTT-GTCCAGTCC-CGTCGGACTGT-AA----C----CATCG
gi|42219 : AATATTTGGCTCGAAAAACTC-TT-TAC-TCG-AACTATTGT-GTCCAGTCT-CGTCGGGTTCG-AG----C----AA-CGAA
gi|42220 : AATACTTGACTGGAACAACCC-TT-AAC-TCA-AACTATTTT-ATCTTGTAC-CGGCGGGATCG-AG----C----CAGCGAA
gi|42222 : AATATTTAGCTCGAACAACCT-TT-AAA-TCG-AACTATTTC-GT-CGGGCC-CGTCCGGTTCG-AG----C----CATCGAA
gi|42223 : AATACTTGGCTCT--CAACCC-TT-AAC-TCG-AACCATTTT-GTCCAATCT-CTTCGTATTCG-AG----C----CATCGAA
gi|42224 : AATATTTGACTCGAACAACCA-T--AAT-TCG-AACAATTTT-GTCTAGTCT-CGTCGGGTTCG-AG----T----CATCGA
gi|42225 : AATATATGGCTCAAACAACCC-TT-AAT-T----ACTATTTT-GTCCAGTCC-CAGCAGGTTCG-AG----C----CATTGAA
gi|42226 : AATACTTGGCTCGAATAACCC-TT-TAC-TCG-AGCTTTTGC-GTTCAGTCC-CATCTGGTTTG-AA----C----CACCGAA
gi|42227 : AATACTTGACTCGAACAACCG-TT-AAC-TCG-AACTATTTT-ATCCAGTTC-CGCGGAGTTCG-AG----C----TA
gi|42270 : ATACTTGGCTCGAACAACC--TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42271 : ATATTTGGCTCGAACGACCC-TT-AAC-TCA-AACTATTTT-GTCAAGTCT-CGTCGTGTTCT-AA----C----CATCAAA
gi|42272 : ATACTTGACTCAAACAACCC-TT-AAC-TGG-AACTATTTT-GTCCAGTCC-CATTGGGTTTG-AT----C----TATCGAA
gi|42273 : ATACTTGACTCGAACAACAC-TT-AGC-TCG-AACTATTTT-GTCAAGTCC-CATCGGGTTCG-CG----C----AATCGAA
gi|42274 : ATACTTGACTCGAA-AACCC-TC-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTGG-AG----C----TCTCGAA
gi|42275 : ATACTTGGCTTGAACAACGC-TT-AAC-TCGGAACTGTTTT-ATCCAGTCC-AGTCGGGTACA-AG----C----CATCAAA
gi|42282 : TACTAGGCTCGAACAACCC-TT-TGC-TCG-AACTATTTT-GGTCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42283 : TACTTGGATCGAACAACCC-TA-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGAGTTCG-AC----C----AATCGAA
gi|42284 : TACTTGGCTCGAATAACCC-TT-GAC-TCA-AACTATTTT-GTCTAATCA-TGTCGGGTTCG-AG----C----CATTGAA
gi|42285 : TACTTAGCTCGAACAACCC-TT-AAC-TCA-AACTTCTTT-GTCCAGTCC-CATCAGGTTTT-AG----C----CATCGGA
gi|42286 : TACTTGGATCGAACAACCC-TT-ATT-TCG-AATTATTAT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCG
gi|42287 : TACTTGGCTCGAACTACCC-TT-AAA-TCG-AACTATTTT-GTCCAGTGT-CATTGGGTTTG-AG----C----CATCGA
gi|42288 : TATTTGGCTCAAACAACTC-TT-AAT-TCG-AAATGTTTT-TTCCAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42289 : TACTTGGTTCTAACAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTCTGATTC--AA----C----CGTCGAA
gi|42290 : TACTTGGCTCGAACAACCCTTT-AAC--CG-AACTATTTT-GTCGAGCCC-CATCGTGTTCG-AG----C----CACCGAA
gi|42291 : TACTTGACTCGAACAACCT-GT-AAC-TCA-AACTATTTT-GTCCAGTTC-CGTTCAGTTCGCAA----------ATCGAA
gi|42294 : ACTTGGCTCGAACAACCC-TT-AAC-TCG-GTCTATTTT--CCCAGTCC-CGTCGGGTTCG-AG----C----AATTGAA
gi|42298 : CTTGGCTGGAACAACCC-TT-GAC-TCG-AACTATTTT-GTCCATTCC-CATCTGGTTTG-AG----C----CATCGAA
gi|42305 : TTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGAA
gi|42306 : TTGGCTTGAACAACCT-TT-AAC-TTA-TATTAGTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGA
gi|42307 : TTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTCGTCC-CATCGAGTTCA-AG----T----CATCGAA
gi|42309 : TGTCTTGAACAACCC-TT-AAC-CTT-AACTATTTT-GTCTAGTCC-CGTCGGGTTCA-AG----C----CATCGAA
Alignments
lowQualScore : 0 0 0 0 0 0 0 0000 0000
lowQualScore : . . . . . . . .... ....
lowQualScore : 4 4 4 4 4 4 4 8888 8888
consensus : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
Reference ( family-197 ) : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42145 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42146 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42147 : AATACTTGGCTCAAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CTTCGTGTTCG-AA----C----CATCGAA
gi|42148 : AATACTTAGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCGAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42149 : AATACTTGGCTCGAACAACCC-TT-ACC-TCG-AATTATTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42150 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42151 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGCCGGGTTCG-AG----C----TATCGAA
gi|42152 : AATACTTGGCTCGAACAACCC-TT-AAA-TCG-AACTAGTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42154 : AATACTTGGCTTTAACAACCC-TT-AAG-TCA-AACTATTTT-GTCCAGTCC-CATCGGGTTCG-AA----C----CATCGAA
gi|42155 : AGTACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTTGGGTTCG-TG----C----CATCG
gi|42156 : AGTATTTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42157 : AACACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCT-CGTCGGGTTCG-AG----C----CATCGAA
gi|42158 : AATACTTGGCTCAAACAACCC-TT-AAC-ACG-AACTATTTT-GCCCAGTTC-CGTCAGGTTCG-AG----C----CTTCGAA
gi|42159 : AATATTTGGTTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGATTCG-AG----C----CATCGGA
gi|42160 : AATACGTGGCTCGCACAACCC-TT-AAC-TCG-AACTATTTT-TCCTAGTCC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42161 : AATAATTGGCTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATC
gi|42162 : AATACTTGGCTCGAACAACCC-CT-AAC-TCA-AACTATTGT-GTCCAATCC-CGTCAGGTACA-AG----C----CATCGAA
gi|42163 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATATT-GTCCGGACC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42164 : AATACTTGGCTTGAACAACCC-TT-AAC-TCG-AACTATTTT-ATGAAGTCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42165 : AATACTTGGTTCGAACAATCC-TT-AAC-TCG-AAGTATTTT-ATCCAGTCC-AGTCGGGTTCG-AA----T----CATCGAA
gi|42166 : AATACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCC-GGTCAGGTTCG-AG----C----CATCGA
gi|42167 : AATATTTGGGTCGAACATCCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCA-AA----T----TATCAAA
gi|42168 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATCGGGATCG-AG----C----CA-CGAA
gi|42169 : AATACCTGGCTCGAACAACCC-AT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTCTGGTTCG-AG----C----CACCGAA
gi|42170 : AATACTTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAATCC-TGTCAGGTTAG-AG----C----CACCAAA
gi|42171 : AATATTTGGCTCGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCTGGTTCA-AG----C----AAT
gi|42172 : AATACTCAGCTCGAACAACCC-TT-CAC-TCG-AACTATATT-GGCCAATCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42173 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTGT-GTCGAATCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42174 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACAGTTTT-GTCCAGTCC-AGCCAGGTTCG-AG----C----CATCGGA
gi|42175 : AATACTTGGCTGGAACAACCC-TT-AAC-TTG-AACTATTTT-GTACAGTCC-TGTCGGGTTCA-AG----C----CATTGAA
gi|42176 : AATATTTGGCTCGAACAACAC-TT-AAT-TCA-AACTATTTT-ATCCAGTCC-CGTCGGGTTTG-AG----C----CAACAAA
gi|42177 : AATACTTGGCTCAAACAACCT-GT-AAT-TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-AG----C----TATCGAA
gi|42178 : AATACTTGGCTCAAACAACCT-TT-AAC-ACA-AACTATTTT-GTCTGGTTC-CATTGGGTTCG-AG----C----CATCGAA
gi|42179 : AATGCTTGGCTCGAACAACCC-TT-AAG-TCG-AACAATTTT-GTACAGTCC-TGTTGGGTTCG-AG----C----CATCGAA
gi|42180 : AATACTTGGCTCAAACAACAC-TT-AAC-TCG-AACTATTTT-GTCAAATCC-CGTCGGGTTCG-TG----T----CATCGAA
gi|42182 : AGTACTTGGCTCAAACAACCC-TT-CAG-TTG-AACTATTTT-GTCCAGCCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42183 : AATGTTTGGCTTGAACAACCT-TT-AAC-TCA-AATTATTTT-GTCCAGTCC-TGTCAGGTTCA-AG----C----CACCGAA
gi|42184 : AATATTTGGCTCGAACAACCC-TT-AAT-TCG-AATTATTTT--CCCTGTCC-CGTCGGGCTCA-AG----C----CATCGAA
gi|42185 : AATATTTGGCTCGAATAACCC-TT-AGC-TCG-TACTATTTT-GTTCAGTCT-CTTCGGGTTCG-AG----C----CATCGAA
gi|42186 : AATACTTGGCTCAAACAACCA-TT-AAC-TTG-AACTATTTT-GTCCTGTCC-TGTCGAGTTCA-AG----C----CATCGAA
gi|42187 : AATACTTAGCTCGAACATCCC-TT-AAC-TCG-AACTACTTT-GACCAATCC-CGTCAGGATCG-AG----C----CATCGA
gi|42188 : AATATTTGACTCGAACAACCC-TT-AAG-TCG-AACTATTTT-GTCCAGCCC-CGCCGGGTTTG-AG----T----CATCG
gi|42189 : AATACTTAGCTCGAGCAACCC-T--AATGTCG-AATTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42190 : AATATTTGGCTCGAACAACCC-TT-AAG-CCG-AACTATTAT-TTCCAGTCC-TGTCGGGTTCG-AG----T----CATCGAA
gi|42191 : AATGCTTGGCTCAAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATTGGGTTTG-AG----C----CTTTGAA
gi|42192 : AATACTTGTCTCGAACAACCA-TT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTAGGATTCA-AG----C----TATCGAA
gi|42194 : AATATTTGGTTCGAACAACCC-TT-AGC-TCG-AACTA-TTA-GTCCAGTCC-GATCGGGTTCG-AG----C----CATCGAA
gi|42195 : AATATTTGGCTTGAACAACTC-TT-AAC-TCA-AACTAACTT-ATTCAGTCC-CATTGGGCTCG-AG----C----CATCGAA
gi|42196 : AATACTTGGCTCGAATAACC--TT-AAC-TCG-AACTATTGT-GTTAAGTCC-CGTCGGGTTCG-AG----CTATTCATCGAA
gi|42197 : AATACTTGGCTGGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCATTCC-TGTTGGAGTCG-AA----C----TGTCAAA
gi|42198 : AATATTTGACTTGAACAACCC-TT-AAC-TTG-AACTA-TTT-GTCCAGTCC-TGTCGGGTTCG-AG----A----CATTGAA
gi|42199 : AATACTTGGCTCAAACAACCC-TT-AAG-TCA-AACTATATT-GTCCAGTCC-AGTCAGGTTCA-AG----C----TATTGGA
gi|42200 : AATACTTGACTCGAACAACCA-TT-ATT-TCG-AACTATTTT-GTCCAGCCT-CGTCTGGTTCG-AG----C----CATCG
gi|42202 : AAGACATGGCTGGAACAACCT-TT-AAC-TAG-AACTATTTT-GTCCTGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42203 : AATACTTGGCTTGAACAACCA-TA-AAG-TCA-AACTATTTT-GTCCTGTCC-CGTCGTGTTTG-AG----C----CATCAAA
gi|42204 : AATACTTTGCTCGAACAATCT-TT-AG--TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-CG----C----CATCGAA
gi|42205 : AATACTTGACTCGAATAAACC-AT-AAC-TCG-AACTAGTTT-GTCAAGTCC-CATCGGGTTCG-GG----C----CATCGAA
gi|42206 : AATACTTGGCCTAAACAACTT-TT-AAC-TCA-AACTAATTT-GTCCTGTCC-CGTCGGATTCG-AG----T----CATCAAA
gi|42207 : AATATTTGGCTTAAACAACCC-TT-AGC-GTG-AACTATTTT-GTTCAGTCC-CGTCAGGTTCA-AG----C----TATCGAA
gi|42208 : AATACTTGGCTCAAACAATCC-T--AAC-TCG-AATTATTTT-GTTTAGTCC-CGTCGTGTTCG-AG----C----CGTTGAA
gi|42209 : AATATTTTGCCCGAAAAACCC-TTTAAC-TCG-AACAATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CACCCAA
gi|42210 : AGTATTTGGCTTGAACAACCC-TT-AAC-TCA-AACTAATCT-GTCCAGTCC-TGTTGGATTCA-AG----C----CAT
gi|42211 : AATACATTGATCGAACAACCC-TT-AAC-TCG-AACTATTTT-ATTCAATCC-CGTCGGTTTCG-AT----C----TATCGAA
gi|42212 : AATGCGTGGCTCGAACAAGCT-TC-AAC-TTG-AACTATTTTTGTTCAGTCC-CGTTGGGTTCG-AG----C----CATCGA
gi|42213 : AATGCTTGGGTCGAACAACAC-TT-AGC-TCG-AACTTTTGT-GTCCAGTCC-TGCCGGGTTCG-AG----C----CATCAAA
gi|42214 : AATAGTTGGCTCGAACAACAC-TT-AAC-TCG-GACTA-CTT-GTCCACTCC-CGTCGGGTTAG-AG----C----CACCGAA
gi|42215 : AATACTTGACTCGAGCAACAT-TT-AAC-TCG-AACTATTTA-GTCCAGTCC-TGTCGCGTTCG-AGTCATC----CATCGAA
gi|42216 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-GACTATTTT-TTCCAGACTACGTCTGATTCG-AG----C----CATTAAA
gi|42217 : AATGTCTGGCTCAATCAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTTGGATTCG-AG----C----CATTGA
gi|42218 : AATATTTGGCTTGAACAGCCT-TT-AAC-TCG-AACTA-TTT-GTCCAGTCC-CGTCGGACTGT-AA----C----CATCG
gi|42219 : AATATTTGGCTCGAAAAACTC-TT-TAC-TCG-AACTATTGT-GTCCAGTCT-CGTCGGGTTCG-AG----C----AA-CGAA
gi|42220 : AATACTTGACTGGAACAACCC-TT-AAC-TCA-AACTATTTT-ATCTTGTAC-CGGCGGGATCG-AG----C----CAGCGAA
gi|42222 : AATATTTAGCTCGAACAACCT-TT-AAA-TCG-AACTATTTC-GT-CGGGCC-CGTCCGGTTCG-AG----C----CATCGAA
gi|42223 : AATACTTGGCTCT--CAACCC-TT-AAC-TCG-AACCATTTT-GTCCAATCT-CTTCGTATTCG-AG----C----CATCGAA
gi|42224 : AATATTTGACTCGAACAACCA-T--AAT-TCG-AACAATTTT-GTCTAGTCT-CGTCGGGTTCG-AG----T----CATCGA
gi|42225 : AATATATGGCTCAAACAACCC-TT-AAT-T----ACTATTTT-GTCCAGTCC-CAGCAGGTTCG-AG----C----CATTGAA
gi|42226 : AATACTTGGCTCGAATAACCC-TT-TAC-TCG-AGCTTTTGC-GTTCAGTCC-CATCTGGTTTG-AA----C----CACCGAA
gi|42227 : AATACTTGACTCGAACAACCG-TT-AAC-TCG-AACTATTTT-ATCCAGTTC-CGCGGAGTTCG-AG----C----TA
gi|42270 : ATACTTGGCTCGAACAACC--TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42271 : ATATTTGGCTCGAACGACCC-TT-AAC-TCA-AACTATTTT-GTCAAGTCT-CGTCGTGTTCT-AA----C----CATCAAA
gi|42272 : ATACTTGACTCAAACAACCC-TT-AAC-TGG-AACTATTTT-GTCCAGTCC-CATTGGGTTTG-AT----C----TATCGAA
gi|42273 : ATACTTGACTCGAACAACAC-TT-AGC-TCG-AACTATTTT-GTCAAGTCC-CATCGGGTTCG-CG----C----AATCGAA
gi|42274 : ATACTTGACTCGAA-AACCC-TC-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTGG-AG----C----TCTCGAA
gi|42275 : ATACTTGGCTTGAACAACGC-TT-AAC-TCGGAACTGTTTT-ATCCAGTCC-AGTCGGGTACA-AG----C----CATCAAA
gi|42282 : TACTAGGCTCGAACAACCC-TT-TGC-TCG-AACTATTTT-GGTCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42283 : TACTTGGATCGAACAACCC-TA-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGAGTTCG-AC----C----AATCGAA
gi|42284 : TACTTGGCTCGAATAACCC-TT-GAC-TCA-AACTATTTT-GTCTAATCA-TGTCGGGTTCG-AG----C----CATTGAA
gi|42285 : TACTTAGCTCGAACAACCC-TT-AAC-TCA-AACTTCTTT-GTCCAGTCC-CATCAGGTTTT-AG----C----CATCGGA
gi|42286 : TACTTGGATCGAACAACCC-TT-ATT-TCG-AATTATTAT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCG
gi|42287 : TACTTGGCTCGAACTACCC-TT-AAA-TCG-AACTATTTT-GTCCAGTGT-CATTGGGTTTG-AG----C----CATCGA
gi|42288 : TATTTGGCTCAAACAACTC-TT-AAT-TCG-AAATGTTTT-TTCCAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42289 : TACTTGGTTCTAACAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTCTGATTC--AA----C----CGTCGAA
gi|42290 : TACTTGGCTCGAACAACCCTTT-AAC--CG-AACTATTTT-GTCGAGCCC-CATCGTGTTCG-AG----C----CACCGAA
gi|42291 : TACTTGACTCGAACAACCT-GT-AAC-TCA-AACTATTTT-GTCCAGTTC-CGTTCAGTTCGCAA----------ATCGAA
gi|42294 : ACTTGGCTCGAACAACCC-TT-AAC-TCG-GTCTATTTT--CCCAGTCC-CGTCGGGTTCG-AG----C----AATTGAA
gi|42298 : CTTGGCTGGAACAACCC-TT-GAC-TCG-AACTATTTT-GTCCATTCC-CATCTGGTTTG-AG----C----CATCGAA
gi|42305 : TTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGAA
gi|42306 : TTGGCTTGAACAACCT-TT-AAC-TTA-TATTAGTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGA
gi|42307 : TTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTCGTCC-CATCGAGTTCA-AG----T----CATCGAA
gi|42309 : TGTCTTGAACAACCC-TT-AAC-CTT-AACTATTTT-GTCTAGTCC-CGTCGGGTTCA-AG----C----CATCGAA
blockSeqCons :
originalCons : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
finalCons : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
Alignments
lowQualScore : 0 0 0 0 0 0 0 0000 0000
lowQualScore : . . . . . . . .... ....
lowQualScore : 4 4 4 4 4 4 4 8888 8888
consensus : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
Reference ( family-197 ) : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42145 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42146 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCG-AA----C----CATCGAA
gi|42147 : AATACTTGGCTCAAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CTTCGTGTTCG-AA----C----CATCGAA
gi|42148 : AATACTTAGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCGAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42149 : AATACTTGGCTCGAACAACCC-TT-ACC-TCG-AATTATTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42150 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42151 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGCCGGGTTCG-AG----C----TATCGAA
gi|42152 : AATACTTGGCTCGAACAACCC-TT-AAA-TCG-AACTAGTTT-GCCCAGTCC-CGTCGGATTCG-AG----C----CATCGAA
gi|42154 : AATACTTGGCTTTAACAACCC-TT-AAG-TCA-AACTATTTT-GTCCAGTCC-CATCGGGTTCG-AA----C----CATCGAA
gi|42155 : AGTACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTTGGGTTCG-TG----C----CATCG
gi|42156 : AGTATTTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42157 : AACACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCT-CGTCGGGTTCG-AG----C----CATCGAA
gi|42158 : AATACTTGGCTCAAACAACCC-TT-AAC-ACG-AACTATTTT-GCCCAGTTC-CGTCAGGTTCG-AG----C----CTTCGAA
gi|42159 : AATATTTGGTTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGATTCG-AG----C----CATCGGA
gi|42160 : AATACGTGGCTCGCACAACCC-TT-AAC-TCG-AACTATTTT-TCCTAGTCC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42161 : AATAATTGGCTCGAACAACCA-TT-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATC
gi|42162 : AATACTTGGCTCGAACAACCC-CT-AAC-TCA-AACTATTGT-GTCCAATCC-CGTCAGGTACA-AG----C----CATCGAA
gi|42163 : AATATTTGGCTCGAACAACCC-TT-AAC-TCG-AACTATATT-GTCCGGACC-CGCCGGGTTCG-AG----C----CATCGAA
gi|42164 : AATACTTGGCTTGAACAACCC-TT-AAC-TCG-AACTATTTT-ATGAAGTCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42165 : AATACTTGGTTCGAACAATCC-TT-AAC-TCG-AAGTATTTT-ATCCAGTCC-AGTCGGGTTCG-AA----T----CATCGAA
gi|42166 : AATACTTGGCTCGAACAACCC-TA-AAC-TCG-AACTAGTTT-GTCCAGTCC-GGTCAGGTTCG-AG----C----CATCGA
gi|42167 : AATATTTGGGTCGAACATCCC-TT-AAC-TCG-AACTATTTT-GCCCAGTCC-CGTCGGGTTCA-AA----T----TATCAAA
gi|42168 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATCGGGATCG-AG----C----CA-CGAA
gi|42169 : AATACCTGGCTCGAACAACCC-AT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTCTGGTTCG-AG----C----CACCGAA
gi|42170 : AATACTTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAATCC-TGTCAGGTTAG-AG----C----CACCAAA
gi|42171 : AATATTTGGCTCGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCTGGTTCA-AG----C----AAT
gi|42172 : AATACTCAGCTCGAACAACCC-TT-CAC-TCG-AACTATATT-GGCCAATCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42173 : AATGCTTGGCTCGAACAACCC-TT-AGC-TCG-AACTATTGT-GTCGAATCC-CGTCGGGTTCG-AG----C----CATCAAA
gi|42174 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-AACAGTTTT-GTCCAGTCC-AGCCAGGTTCG-AG----C----CATCGGA
gi|42175 : AATACTTGGCTGGAACAACCC-TT-AAC-TTG-AACTATTTT-GTACAGTCC-TGTCGGGTTCA-AG----C----CATTGAA
gi|42176 : AATATTTGGCTCGAACAACAC-TT-AAT-TCA-AACTATTTT-ATCCAGTCC-CGTCGGGTTTG-AG----C----CAACAAA
gi|42177 : AATACTTGGCTCAAACAACCT-GT-AAT-TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-AG----C----TATCGAA
gi|42178 : AATACTTGGCTCAAACAACCT-TT-AAC-ACA-AACTATTTT-GTCTGGTTC-CATTGGGTTCG-AG----C----CATCGAA
gi|42179 : AATGCTTGGCTCGAACAACCC-TT-AAG-TCG-AACAATTTT-GTACAGTCC-TGTTGGGTTCG-AG----C----CATCGAA
gi|42180 : AATACTTGGCTCAAACAACAC-TT-AAC-TCG-AACTATTTT-GTCAAATCC-CGTCGGGTTCG-TG----T----CATCGAA
gi|42182 : AGTACTTGGCTCAAACAACCC-TT-CAG-TTG-AACTATTTT-GTCCAGCCC-CGTCAGGTTCG-AG----C----CATCGAA
gi|42183 : AATGTTTGGCTTGAACAACCT-TT-AAC-TCA-AATTATTTT-GTCCAGTCC-TGTCAGGTTCA-AG----C----CACCGAA
gi|42184 : AATATTTGGCTCGAACAACCC-TT-AAT-TCG-AATTATTTT--CCCTGTCC-CGTCGGGCTCA-AG----C----CATCGAA
gi|42185 : AATATTTGGCTCGAATAACCC-TT-AGC-TCG-TACTATTTT-GTTCAGTCT-CTTCGGGTTCG-AG----C----CATCGAA
gi|42186 : AATACTTGGCTCAAACAACCA-TT-AAC-TTG-AACTATTTT-GTCCTGTCC-TGTCGAGTTCA-AG----C----CATCGAA
gi|42187 : AATACTTAGCTCGAACATCCC-TT-AAC-TCG-AACTACTTT-GACCAATCC-CGTCAGGATCG-AG----C----CATCGA
gi|42188 : AATATTTGACTCGAACAACCC-TT-AAG-TCG-AACTATTTT-GTCCAGCCC-CGCCGGGTTTG-AG----T----CATCG
gi|42189 : AATACTTAGCTCGAGCAACCC-T--AATGTCG-AATTATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42190 : AATATTTGGCTCGAACAACCC-TT-AAG-CCG-AACTATTAT-TTCCAGTCC-TGTCGGGTTCG-AG----T----CATCGAA
gi|42191 : AATGCTTGGCTCAAACAACCC-TT-AAC-TCG-AACTAATTT-GTCCAGTCC-CATTGGGTTTG-AG----C----CTTTGAA
gi|42192 : AATACTTGTCTCGAACAACCA-TT-AAC-TCG-AACTAGTTT-GTCCAGTCC-CGTAGGATTCA-AG----C----TATCGAA
gi|42194 : AATATTTGGTTCGAACAACCC-TT-AGC-TCG-AACTA-TTA-GTCCAGTCC-GATCGGGTTCG-AG----C----CATCGAA
gi|42195 : AATATTTGGCTTGAACAACTC-TT-AAC-TCA-AACTAACTT-ATTCAGTCC-CATTGGGCTCG-AG----C----CATCGAA
gi|42196 : AATACTTGGCTCGAATAACC--TT-AAC-TCG-AACTATTGT-GTTAAGTCC-CGTCGGGTTCG-AG----CTATTCATCGAA
gi|42197 : AATACTTGGCTGGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCCATTCC-TGTTGGAGTCG-AA----C----TGTCAAA
gi|42198 : AATATTTGACTTGAACAACCC-TT-AAC-TTG-AACTA-TTT-GTCCAGTCC-TGTCGGGTTCG-AG----A----CATTGAA
gi|42199 : AATACTTGGCTCAAACAACCC-TT-AAG-TCA-AACTATATT-GTCCAGTCC-AGTCAGGTTCA-AG----C----TATTGGA
gi|42200 : AATACTTGACTCGAACAACCA-TT-ATT-TCG-AACTATTTT-GTCCAGCCT-CGTCTGGTTCG-AG----C----CATCG
gi|42202 : AAGACATGGCTGGAACAACCT-TT-AAC-TAG-AACTATTTT-GTCCTGTCC-CGTCGGGTTCG-AG----C----TATCGAA
gi|42203 : AATACTTGGCTTGAACAACCA-TA-AAG-TCA-AACTATTTT-GTCCTGTCC-CGTCGTGTTTG-AG----C----CATCAAA
gi|42204 : AATACTTTGCTCGAACAATCT-TT-AG--TCG-AACTGTTTT-GTCCAGTCC-TGTCGGGTTCG-CG----C----CATCGAA
gi|42205 : AATACTTGACTCGAATAAACC-AT-AAC-TCG-AACTAGTTT-GTCAAGTCC-CATCGGGTTCG-GG----C----CATCGAA
gi|42206 : AATACTTGGCCTAAACAACTT-TT-AAC-TCA-AACTAATTT-GTCCTGTCC-CGTCGGATTCG-AG----T----CATCAAA
gi|42207 : AATATTTGGCTTAAACAACCC-TT-AGC-GTG-AACTATTTT-GTTCAGTCC-CGTCAGGTTCA-AG----C----TATCGAA
gi|42208 : AATACTTGGCTCAAACAATCC-T--AAC-TCG-AATTATTTT-GTTTAGTCC-CGTCGTGTTCG-AG----C----CGTTGAA
gi|42209 : AATATTTTGCCCGAAAAACCC-TTTAAC-TCG-AACAATTTT-GTCCAGTCC-CGTCGGGTTCG-AG----C----CACCCAA
gi|42210 : AGTATTTGGCTTGAACAACCC-TT-AAC-TCA-AACTAATCT-GTCCAGTCC-TGTTGGATTCA-AG----C----CAT
gi|42211 : AATACATTGATCGAACAACCC-TT-AAC-TCG-AACTATTTT-ATTCAATCC-CGTCGGTTTCG-AT----C----TATCGAA
gi|42212 : AATGCGTGGCTCGAACAAGCT-TC-AAC-TTG-AACTATTTTTGTTCAGTCC-CGTTGGGTTCG-AG----C----CATCGA
gi|42213 : AATGCTTGGGTCGAACAACAC-TT-AGC-TCG-AACTTTTGT-GTCCAGTCC-TGCCGGGTTCG-AG----C----CATCAAA
gi|42214 : AATAGTTGGCTCGAACAACAC-TT-AAC-TCG-GACTA-CTT-GTCCACTCC-CGTCGGGTTAG-AG----C----CACCGAA
gi|42215 : AATACTTGACTCGAGCAACAT-TT-AAC-TCG-AACTATTTA-GTCCAGTCC-TGTCGCGTTCG-AGTCATC----CATCGAA
gi|42216 : AATACTTGGCTCGAACAACCC-TT-AAC-TCG-GACTATTTT-TTCCAGACTACGTCTGATTCG-AG----C----CATTAAA
gi|42217 : AATGTCTGGCTCAATCAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTTGGATTCG-AG----C----CATTGA
gi|42218 : AATATTTGGCTTGAACAGCCT-TT-AAC-TCG-AACTA-TTT-GTCCAGTCC-CGTCGGACTGT-AA----C----CATCG
gi|42219 : AATATTTGGCTCGAAAAACTC-TT-TAC-TCG-AACTATTGT-GTCCAGTCT-CGTCGGGTTCG-AG----C----AA-CGAA
gi|42220 : AATACTTGACTGGAACAACCC-TT-AAC-TCA-AACTATTTT-ATCTTGTAC-CGGCGGGATCG-AG----C----CAGCGAA
gi|42222 : AATATTTAGCTCGAACAACCT-TT-AAA-TCG-AACTATTTC-GT-CGGGCC-CGTCCGGTTCG-AG----C----CATCGAA
gi|42223 : AATACTTGGCTCT--CAACCC-TT-AAC-TCG-AACCATTTT-GTCCAATCT-CTTCGTATTCG-AG----C----CATCGAA
gi|42224 : AATATTTGACTCGAACAACCA-T--AAT-TCG-AACAATTTT-GTCTAGTCT-CGTCGGGTTCG-AG----T----CATCGA
gi|42225 : AATATATGGCTCAAACAACCC-TT-AAT-T----ACTATTTT-GTCCAGTCC-CAGCAGGTTCG-AG----C----CATTGAA
gi|42226 : AATACTTGGCTCGAATAACCC-TT-TAC-TCG-AGCTTTTGC-GTTCAGTCC-CATCTGGTTTG-AA----C----CACCGAA
gi|42227 : AATACTTGACTCGAACAACCG-TT-AAC-TCG-AACTATTTT-ATCCAGTTC-CGCGGAGTTCG-AG----C----TA
gi|42270 : ATACTTGGCTCGAACAACC--TT-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42271 : ATATTTGGCTCGAACGACCC-TT-AAC-TCA-AACTATTTT-GTCAAGTCT-CGTCGTGTTCT-AA----C----CATCAAA
gi|42272 : ATACTTGACTCAAACAACCC-TT-AAC-TGG-AACTATTTT-GTCCAGTCC-CATTGGGTTTG-AT----C----TATCGAA
gi|42273 : ATACTTGACTCGAACAACAC-TT-AGC-TCG-AACTATTTT-GTCAAGTCC-CATCGGGTTCG-CG----C----AATCGAA
gi|42274 : ATACTTGACTCGAA-AACCC-TC-AAC-TCG-AACTATTTT-GTCTAGTCC-CGTCGTGTTGG-AG----C----TCTCGAA
gi|42275 : ATACTTGGCTTGAACAACGC-TT-AAC-TCGGAACTGTTTT-ATCCAGTCC-AGTCGGGTACA-AG----C----CATCAAA
gi|42282 : TACTAGGCTCGAACAACCC-TT-TGC-TCG-AACTATTTT-GGTCAGTCC-CGTCGGGTTCG-AG----C----CATCGAA
gi|42283 : TACTTGGATCGAACAACCC-TA-AAC-TCG-AACTATTTT-GTCCAGTCC-CGTCGAGTTCG-AC----C----AATCGAA
gi|42284 : TACTTGGCTCGAATAACCC-TT-GAC-TCA-AACTATTTT-GTCTAATCA-TGTCGGGTTCG-AG----C----CATTGAA
gi|42285 : TACTTAGCTCGAACAACCC-TT-AAC-TCA-AACTTCTTT-GTCCAGTCC-CATCAGGTTTT-AG----C----CATCGGA
gi|42286 : TACTTGGATCGAACAACCC-TT-ATT-TCG-AATTATTAT-GTCCAGTCC-CGTCGGGTTCG-AG----C----TATCG
gi|42287 : TACTTGGCTCGAACTACCC-TT-AAA-TCG-AACTATTTT-GTCCAGTGT-CATTGGGTTTG-AG----C----CATCGA
gi|42288 : TATTTGGCTCAAACAACTC-TT-AAT-TCG-AAATGTTTT-TTCCAGTCC-CGTCGTGTTCG-AG----C----CATCGAA
gi|42289 : TACTTGGTTCTAACAACCC-TT-AAC-TCA-AACTA-TTT-GTCCAGTCC-TGTCTGATTC--AA----C----CGTCGAA
gi|42290 : TACTTGGCTCGAACAACCCTTT-AAC--CG-AACTATTTT-GTCGAGCCC-CATCGTGTTCG-AG----C----CACCGAA
gi|42291 : TACTTGACTCGAACAACCT-GT-AAC-TCA-AACTATTTT-GTCCAGTTC-CGTTCAGTTCGCAA----------ATCGAA
gi|42294 : ACTTGGCTCGAACAACCC-TT-AAC-TCG-GTCTATTTT--CCCAGTCC-CGTCGGGTTCG-AG----C----AATTGAA
gi|42298 : CTTGGCTGGAACAACCC-TT-GAC-TCG-AACTATTTT-GTCCATTCC-CATCTGGTTTG-AG----C----CATCGAA
gi|42305 : TTGGCTTGAACAACCC-TT-AAC-TCA-AACTATTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGAA
gi|42306 : TTGGCTTGAACAACCT-TT-AAC-TTA-TATTAGTTT-GTCCAGTCC-CGTCGGGTTCT-AG----C----CATCGA
gi|42307 : TTAGTTCGAACAACCC-TT-AAC-TCG-AACTATTTT-GTCTCGTCC-CATCGAGTTCA-AG----T----CATCGAA
gi|42309 : TGTCTTGAACAACCC-TT-AAC-CTT-AACTATTTT-GTCTAGTCC-CGTCGGGTTCA-AG----C----CATCGAA