lowQualScore : 11111 22
lowQualScore : 4 0 0 1111 00 11111 22 111 0 0 6 0 0 11 0 00 000 0 0 11111111 111 22
lowQualScore : . . . .... .. ..... .. ... . . . . . .. . .. ... . . ........ ... ..
lowQualScore : 6 7 5 5555 66 66666 66 555 4 4 2 8 4 00 4 66 777 4 4 55555555 111 00
consensus : AGTTATAG-CATTTCAA-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGGCCAG
Reference ( gi|97905 ) : AGTTACAG-CATTTCAA-A----A--A--A--T--T---G-A-GCT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACT-TGGGGCCAG
gi|97913 : AGTTACAG-TATTTCAA-A----A--A--A--T--T---G-A-GCT-GA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AAT---GAAACT-TGGG
gi|97906 : AGTTATAG-CTCTTCAT-A----A--A--A--C--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGGCCAGcc
gi|97904 : AGTTATAG-CATTTGGA-A----C--A--T--T--T---G-A-GTT-GA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGGCCAG
gi|97909 : AGTCACGG-CATTTCAA-A----A--A--T--T--T---G-A-ATT-CA-G--GAAAA-ACTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--CGGGGCCAG
gi|97914 : AGTTACAA-TATTTCAA-A----A--A--A--T--T---T-A-GTT-GT-G--GAAAA-TCTTAAGTTG--AG---ATG-C-TT--------AGT---GAAAC--TGAGGTCA
gi|97925 : AGTTATAG-CATTGCAA-A----T--A--T--T--T---G-A-GTT-GA-G--AAAAA-TCTCAAGTTA--AG---ATG-T-TT--------AGT---GAAACT-TGG
gi|97912 : AGTTATAG-GATTTCAA-A----A--A-----T--T---A-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAA-T-TGG
gi|97908 : AGTTAAAA-CATTTAAA-G----A--A--T--T--T---G-G-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-C-TT--------TGT---GAAAC--TGGGGCCAG
gi|97916 : AGTTTTAG-CATTTCAA-A----A--G--T--T--T---G-A-GTT-GA-G--GAAAA-TGTCAAGTTG--AG---ATG-T-TT--------AGT---G-AACA-TGGGACC
gi|97911 : AGTTATAG-CGTTTCAA-A----T--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GCAACT-
gi|97934 : AGTTATAA-CATTTCAA-A----A--A--G--T--T---G-A-GCT-GA-G--GAAAA-TCCCATGTT---AA---ATG-T-TT--------AAT---GAAAC--TGGGACCagaacc
gi|97903 : AGTTATAG-CAAGTCAA-A----A--G--T--T--T---G-A-GTT-GA-G--GCAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGTCC
gi|97920 : AGTTACAG-CTTTTCAA-A----A--C--T--C--T---G-A-GTT-GA-T--GAAAA-TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGAGGTCAG
gi|97919 : AGTTATAC-CATTTCAA-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTAG--AC---ATG-T-TT--------AGT---GAAAC
gi|97918 : AGTTATAA-CATTTTAA-A----T--A--T--T--T---G-A-GTC-GA-G--GAAAA-TCTTAAGTTG--AG---ATGTT-TT--------AGT---GAAAC--TGGGGTCgggagtcgg
gi|97907 : AGTTCTAG-CAATTCAA-A----A--T--T--T--C---G-A-GTT-GA-G--GAAAA-CCTTAAGTTG--AG---ATG-T-TG--------AGT---GAAAC--TGGGGCCAG
gi|97923 : AGTTATAG-CTTTTCAA-A----A--A--C--T--T---G-A-GTT-GG-G--GAAAA-TCTCAAGTTG--AA---ATG-T-TT--------AGTTTATAAAC--TGGGACC
gi|97915 : AATTATAG-CCTTT-AA-T----G--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGGCC
gi|97941 : AGTTATTG-CATTTTAA-A----A--A--A--A--T---G-G-GTT-GA-G--GAAAA-TCTAAAGTTG--GG---ATG-A-TT--------AGT---GAAAC--TGGGATCAG
gi|97922 : AGTTATAG-CTTTTCAA-A----G--A--T--T--T---A-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-A-TT--------AAT---GAAACT-GGG
gi|97940 : AGCTATAT-CATTTCAA-A----A--A-----T--T---G-C-GAT-GA-G--GAAAA-TCTCAAGTTG--AT---ATG-T-TT--------AGT---AAAAC--TGAGACCA
gi|97927 : AGTGATAG-CATTTCAA-A----T--A--T--T--T---G-A-GAT-GA-G--GGATA-TCTCAAGTTG--AG---ATA-T-TC--------AGT---AAAAC--TGGGGCC
gi|97932 : AGTTATAA-CATTTTAA-A----C--A--T--T--T---G-A-ATT-GA-G--GAAAA-TCTCAAGTTG--AGATCATG-T-TT--------ATT---GAAACT-TAGG
gi|97924 : AGTTATAG-TCTTTTAA-A----G--A--T--C--T---G-A-GTT-GA-A--GAATC-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAA-T-TGGGGCTAGtcag
gi|97952 : AGTTATAA-CATT--AA-AG---A--A--A--C--T---G-A-CTT-GATG--GAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACT-TGGGGC
gi|97942 : AGATATAG-CATTTTTA-A----A--A--T--T--T---G-A-GTT-GA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TA--------AGT---GAAAC
gi|97930 : AGTTATAG-CCTTTTAA-A----T--A--T--T--T---G-A-TTT-GA-G--GAAAA-TTTCAAGTTG--AG---ATA-T-TT--------GAT---GAAAC--TAGAGCCAG
gi|97943 : AGTTGCAG-CATTTCAA-A----A--A--T--C--T---G-A-TTT-GA-A--GAAAA-ACTCAAGTCA--AG---ATG-TAAG--------AGT---GAAAC--TGGGGCCAG
gi|97946 : AATTGTAG-CATTTCAA-A----A--G--T--T--T---G-A-GCT-GA-G--GAATA-TCTCAATTTG--TG---TTG-A-TT--------AGT---GAAAC--TGGGGC
gi|98019 : AGTTCAAA-CATTTCAA-T----G--A--A--T--A---G-A-GTT-GA-GAAGAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAGCT-AGG
gi|97933 : atagAGTTATAG-CACTTCAA-G----A--T--T--T--T---G-A-GAT-GA-G--GAAAA-CCTAAAGCTA--AG---ATG-T-TA--------AGT---AAAAC--TGGGGTCAGacc
gi|97931 : AGTTATAG-CATTTTAA-A----A--A--T--T--T---G-A-GTA-GC-G--GGAAA-TCTAAAGTTG--AG---ATG-T-AT--------AGT---GAAACT-
gi|97950 : AATTATAG-CATTT-AG-A----A--A--A--TC-T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--CG---ATA-T-TT--------TGT---GAAACgtagccgg
gi|97944 : AGTTATGA-CAATT-AA-A----A--A--A--TA-T---G-A-GCT-GA-G--GAAAA-TATCAAGTTG--AG---ATG-T-TT--------ATT---AAAACT-
gi|97939 : AGTTATAA-TATTTCAA-A----A--C--T--T--T---G-----T-G-----GAAAA-TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGAACCAGg
gi|97936 : AGTTCTAG-CACTTCAA-A----G--A--T--T--TT--GTA-GTT-GA-G--GAAAA-TCTCCAGTTG--AG---ATG-C-TT--------GGT---TAAAC--TGGGACC
gi|97947 : AGTTATAA-CCTTTCAA-A----A--A--T--T--T---A-A-GTT-GA-G--AAAGG-TCTTAAATTG--AG---ATG-T-TA--------AGT---GAAACT-GGG
gi|97949 : AGTTATAG-CATTTCAA-A----A--A-----T--T---A-------------GAAAA-TTTCAAGTTG--AA---GTA-T-TT--------AAT---GAAAC--TGGGGCTAG
gi|97935 : AGTTATGA-CATTT----A----A--A--A--T--TTTTG-A-ATT-GA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TTATATAATAAGT---GAAAC--TGGAGCC
gi|97926 : AATTATAA-AATTT-AA-A----A--G--T--T--T---G-A-GAT-TA-A--GAAAA-TCTCAAGTTG--AG---ATG-T-AT--------AAT---GAAAC--TGGGACC
gi|97945 : AGTTATAG-CATTC---------A--A--A--T--T---------T--A-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------GAT---GTAAC--TGGGACCAG
gi|97951 : AGTTATAA-CATTTCAA-A----A--A--T--T--T---A-A-GTT-GA-G--GAAAA-TCTCAA---------------------------ACT---GAAAC--TGGGGCCAG
gi|97938 : AGTTATAAACATTCTAA-ATTTTA--A--G--T--T---G-A-G---AA-A--AAAAA-TCTCAAGTTC--AG---ATG-T-TT--------CGT---GAAGC--CGGAGCCAG
gi|97970 : GTTATAA-CATTTCAA-C----T--------T--T---G-A-GTT-GA-G--GAAAA-CCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGACCAG
gi|97969 : GTTATAG-CAATTCAG-A----A--A--T--T--T---G-A-GTT-GA-A--GTAAA-TCTCAAGTTG--AA---ATG-T-TT--------AGT---GAAAC--TGGGACTA
gi|97975 : TTATAG-AAATTAAA-A----A--A--A--T--T---G-A-ATT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGTG--GAAACT---GGGCCAG
gi|97980 : TTATAA-CATTTCAA-A----A--C--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTGA--AG---ATG-C-TC--------AGT---G-AACC-TGGAGCCAG
gi|97984 : TTATAG-TATTTCAA-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG-----------------------AGT---GAAACT-TGGG
gi|97983 : TTGTAG-AATTTCAA-A----C--T--T--T--T---G-A-GTT-GA-G--GAAAT-TCTTAACTTG--AG---ATG-T-TT--------AGT---GAAACT----GGCCcc
gi|97993 : TTACAG-AAATTCAG-A----A--T--T--G--T---G-A-GTT-CA-G--GAAAA-ACTGAAGTTG--GG---ATG-T-TT--------AGT-------TC-TGGAGCCAccag
gi|97937 : TATAG-TATTTCAA-A----A--------T--T---T-ACGTT-TA-G--CAAAA-TCTTAAGTTG--AG---ATG-T-TT--------AAT---GAAAC--TGGGGC
gi|98011 : agttaTATAG-CACTTCCA-A----T--A--T--T--T---G-A-GTT-AA-A--GAAAA-TTTCAAGTTA--GG---ATA-T-TT--------AGT---GAAAC--AGGGGCC
gi|98018 : ATAG-CATCTCAA-A----A--A--T--A--T---G-A-GTT-GT-A--GAATA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACT---GGGCC
gi|98016 : ATAG-CAATTAAA-A----A--A--T--T--T---G-A-GAT-GA-G--GAAAA-TCTGAAGTTG--AG---TTG-T-TT--------AGT---ATAAC--TGGGGCCAGc
gi|98009 : AG-CATTTCAA-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCATGTTG--AA---ATG-T-TT--------AGT---GAAACTGTGG
gi|98044 : tgtATTTAAA-A----A--A--A--T------G-A-ATT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGC---GAAAC--TGGACCCAGcaag
gi|97981 : ATTTGAACA----A--A--A--TC-T---G-A-GTT-AA-G--GAAAC-TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC--TAGGGCCAG
gi|98050 : ttaagagTTCAG-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTAG--AG---ATG-T-TT--------AGT---GAAA-T-TGGGACCAG
gi|98053 : TTCAA-A----A--A-----C--T---G-T-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--TGGTGCCA
gi|98056 : TTCAA-A----A--A--A--T--T---G-A-GTTTAA-G--AAAAA-TCTCAAGTTT--AG---ATG-T-TT--------AGT---GAAAA--TGGGGCCA
gi|98051 : TTCAA-A----A--A--A--T--T---G-A-GTT-TA-G--GAAAA-TCTCAAGTTG--AG---AAG-T-TT--------AGT---GAAAC
gi|98061 : TTTAA-A----A--A--A--A--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--CA---ATG-T-TT--------AGT---GAAATT-TGGG
gi|98052 : TTCGA-A----A--A--T--T--T---G-A-GTT-GA-G--GTAAA-TCTCAGGTTG--AG---ATG-T-TT--------AGT---GAAAC--CGGGGTCctag
gi|98059 : TTCAA-A----A--T--A--T--T---A-A-GTT-AA-G--GAATA-TCTCAAGTTA--AA---ATG-T-TA--------AGT---GAAAC--TGGGGCCA
gi|98055 : TTCAA-A----A--A--T--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AA---ACC-T-TT--------ATT---GAAACT-GGG
gi|98058 : TTTGA-A----G--A--T--T--T---G-T-GTT-GA-G--GAAAA-TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAACT-
gi|98054 : TTCAA-A----A--A--T--T--T---A-A-GTT-GA-T--GAAAA-CATCAAGCTG--AG---ATG-T-TT--------AGT---GAAACT-gg
gi|98063 : TTCAG-A----A--ATTA--T--T-----A-TTT-AA-G--GGACA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--CGGGGCCgcgaccgg
gi|98046 : TTCAA-A----A--G--T--T--T---G-A-GTT-GA-GA-GAAAAGTATCAAGTTG--AG---ATG---TT--------AGT---GAAAC--TGAGGTCA
gi|98064 : aTTCAA-A----C--A--T--T--T---C-A-GTT-GA-G--GAAAT-TCTCAAGTTG--AG---ATA-T-TT--------AGT---GGCA-T-TAGGGCC
gi|98062 : TTCAA-A----A--C--T--T--T---G-A-ATT-GA-G--GAAAA-TCTCAAATTGATAT---ATG-T-TT--------AGT---AAAAC--TAGGATCAG
gi|98066 : TTCAA-A----AGTA--AGTT--T---G-A-ATT-GA-G--GAGAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GTAA
gi|98060 : TTCAA-A----G--A--T--A--T---G-A-GTT-GA-G--G-AAC-TCTCAACTTG--AA---ATG-T-TT--------GGT---GAAG---TGGGGCCAGgcggagc
gi|98045 : TTAA-A----A--T--A--TC-T---G-A-GTT-GA-G--GAAAA-TCTTAGGTTA--AA---ATG-T-TT--------AGT---GAAAC--CGGGACCAG
gi|98072 : aTTAA-A----C--A--T--T--T---A-A-GTT-CA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC--CGGGACC
gi|97992 : TCGA-G----A--A--A--TC-T---G-A-GTT-GA-G--GAAAA-TCTCAGCTTG--AG---ATG-T-TT--------GGT---GAAA
gi|98065 : ttagagaaaTTAA-A----A--A--A--T--TT--A-A-ATT-GA-G--GAAAA-TTTCAAGCTG--AG---ATG-T-GT--------TGT---GAAAC--TGGAACC
gi|98074 : TCAA-A----G--A--T--A--T---G-A-GTA-GA-G--GAAAA-TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC--TGGCGCC
gi|98073 : TCAA-A----G--A--T--A--T---G-A-GTA-GA-G--GAAAA-TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC--TGGCGCC
gi|97928 : TCAA-A----A--G--T--T--T---A-A-GTT-GA-G--GAAAA-ACTCAATTTG--AG---ATA-C-TT--------GGT---GAAAC--CGTGGCC
gi|98010 : agttatcgaaagCAA-A----A--A--T--T--T---G-A-GTT-GA-G--AAAAA-TCTCAAGTTG--AG---ATG-T-TC--------ACT---GAAA-T-TGGTGCC
gi|97994 : tgtagtaacaAA-A----A--A--A--T--T---G-A-GTT-GA-G--GTAAA-TCTCAGTTTG--AG---ATG-T-TT--------CGT---GAAAC
gi|98077 : ttctagaaaAA-A----G--A--T--T--T---G-T-GTT-GA-G--AAAAA-TCTCAAGTTG--AG---ATA-T-TT--------AGT---GAATCT-TAGGagggtcc
gi|98076 : A-A----A--A--A--T------G-A-GTT-GA-G--GAAAA-TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAACT-cta
gi|98021 : A-A----A--A--A--TGTT---G-A-GTTTGA-G--GGAAA-TCTCAAATTG--AG---ATG-T-TT--------AGT---GGATC--TGGGGCCAGgaagtc
gi|97917 : tagaaatA-A----A--A--AGTT--T---A-A-GTT-GA-G--GAAAA-ACTCAAGTTG--AG---ATG-C-TT--------GGT---GAAAC--CGGGGCC
gi|98057 : agttatcgaaagt--A--G--T--T---A-A-GCA-AA-G--GAAAA-TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC--TGGGGC
gi|98089 : tttaaatatttg--T--T---C-A-GTT-GA-A--AAAAA-TCTCAAGTTG--AG---ATG-C-TT--------AGT---GAAACA-TGGGGTCAG
gi|98022 : t--T--T---A-A-GTT-GA-G--GAAAA-TCTCAAGTTG--AG---ATG-T-TT--------AG----GGAATC-TGAGGCC
gi|97988 : tagaaaattgagattt--T--T---G-A-GTT-GA-G--GAAAA-TCTCACCTTG--AG---ATG-T-TT--------AGT---GAAACT-
gi|98031 : ttacagaaattgagatatt--T--T---G-A-GTT-GA-G--GAGAA-TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAACT-g
gi|98084 : agaaattgaattgt--T--T---G-A-GTT-GA-G--GAAAA-TCTCAAGTTA--AG---ACG-T-TT--------GAT---AAAGC--TGCGGCCAGgg
gi|98023 : at--T--T---G-G-GTT-GA-G--GAAAG-TCTCAAATTG--AG---ATG-T-TT--------AGT---GAA
gi|98027 : tagataatctaagatt--T--T---G-A-ATT-GA-G--GAAAA-TCTCAACTAG--AA---ATG-T-TT--------AGT---GAAACT-ctg
gi|98042 : agaaatttaaattt--T--T---C-A-GTT-GA-G--GAAAA-TCTCAGCTTG--AG---ACG-T-TT--------AGT---GAAACgg
gi|98012 : aattgagaatt--T--T---G-A-GTT-AC-A--GAAAA-TCTCAACTTG--AG---ATG-T-TT--------AGT---GAAACaggcc
gi|97985 : tagagaaattggaaatt--T--T---T-A-GTT-GA-G--AAAAA-TTTCAGTTTG--AG---ATG-T-TT--------AGT---GAAAC--CGGACCCAGcggcgc
gi|98085 : ttagaaaaattaaacatt--T---G-A-GCT-GA-A--GAAAA-TCTCAAGCTG--AG---CTG-T-TT--------ATT---GGAAC--TGGAGCCAG
gi|98030 : atc--T---G-A-GAT-GA-G--GAAAA-TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAACT-
Alignments
lowQualScore : 0 0 1111 0 0 0 0 0 22222 111 00 000 0 0 11111111 111 1
lowQualScore : . . .... . . . . . ..... ... .. ... . . ........ ... .
lowQualScore : 7 4 3333 4 4 4 8 4 00000 111 55 777 4 4 44444444 111 2
consensus : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
Reference ( family-188 ) : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97903 : AGTTATAG-CAAGTCAAAA-GT----T-T-G-AGTT-GA-G-----GCAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGTCC
gi|97904 : AGTTATAG-CATTTGGAAC-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97905 : AGTTACAG-CATTTCAAAA-AA----T-T-G-AGCT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGCCAG
gi|97906 : AGTTATAG-CTCTTCATAA-AA----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97907 : AGTTCTAG-CAATTCAAAA-TT----T-C-G-AGTT-GA-G-----GAAAA---CCTTAAGTTG--AG---ATG-T-TG--------AGT---GAAAC-TGGGGCCAG
gi|97908 : AGTTAAAA-CATTTAAAGA-AT----T-T-G-GGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-C-TT--------TGT---GAAAC-TGGGGCCAG
gi|97909 : AGTCACGG-CATTTCAAAA-AT----T-T-G-AATT-CA-G-----GAAAA---ACTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCCAG
gi|97911 : AGTTATAG-CGTTTCAAAT-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GCAAC-TAGAACC
gi|97912 : AGTTATAG-GATTTCAAAA-AT----T---A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGG
gi|97913 : AGTTACAG-TATTTCAAAA-AA----T-T-G-AGCT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TTGGGCC
gi|97914 : AGTTACAA-TATTTCAAAA-AA----T-T-T-AGTT-GT-G-----GAAAA---TCTTAAGTTG--AG---ATG-C-TT--------AGT---GAAAC-TGAGGTCA
gi|97915 : AATTATAG-CCTTT-AATG-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCC
gi|97916 : AGTTTTAG-CATTTCAAAA-GT----T-T-G-AGTT-GA-G-----GAAAA---TGTCAAGTTG--AG---ATG-T-TT--------AGT---GAACA-TGGGACC
gi|97917 : AGTTATCG-AAAGTAAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAAGTTG--AG---ATG-C-TT--------GGT---GAAAC-CGGGGCC
gi|97918 : AGTTATAA-CATTTTAAAT-AT----T-T-G-AGTC-GA-G-----GAAAA---TCTTAAGTTG--AG---ATGTT-TT--------AGT---GAAAC-TGGGGTC
gi|97919 : AGTTATAC-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AC---ATG-T-TT--------AGT---GAAAC-GGGAGTCGG
gi|97920 : AGTTACAG-CTTTTCAAAA-CT----C-T-G-AGTT-GA-T-----GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGAGGTCAG
gi|97922 : AGTTATAG-CTTTTCAAAG-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-A-TT--------AAT---GAAAC-TGGG
gi|97923 : AGTTATAG-CTTTTCAAAA-AC----T-T-G-AGTT-GG-G-----GAAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGTTTATAAAC-TGGGACC
gi|97924 : AGTTATAG-TCTTTTAAAG-AT----C-T-G-AGTT-GA-A-----GAATC---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGGGGCTAG
gi|97925 : AGTTATAG-CATTGCAAAT-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTA--AG---ATG-T-TT--------AGT---GAAAC-TTGG
gi|97926 : AATTATAA-AATTT-AAAA-GT----T-T-G-AGAT-TA-A-----GAAAA---TCTCAAGTTG--AG---ATG-T-AT--------AAT---GAAAC-TGGGACC
gi|97927 : AGTGATAG-CATTTCAAAT-AT----T-T-G-AGAT-GA-G-----GGATA---TCTCAAGTTG--AG---ATA-T-TC--------AGT---AAAAC-TGGGGCC
gi|97928 : AGTTATCG-AAAGTCAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAATTTG--AG---ATA-C-TT--------GGT---GAAAC-CGTGGCC
gi|97930 : AGTTATAG-CCTTTTAAAT-AT----T-T-G-ATTT-GA-G-----GAAAA---TTTCAAGTTG--AG---ATA-T-TT--------GAT---GAAAC-TAGAGCCAG
gi|97931 : AGTTATAG-CATTTTAAAA-AT----T-T-G-AGTA-GC-G-----GGAAA---TCTAAAGTTG--AG---ATG-T-AT--------AGT---GAAAC-TGTAGCCGG
gi|97932 : AGTTATAA-CATTTTAAAC-AT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AGATCATG-T-TT--------ATT---GAAAC-TTAGGTCAG
gi|97933 : AGTTATAG-CACTTCAAGA-TT----T-T-G-AGAT-GA-G-----GAAAA---CCTAAAGCTA--AG---ATG-T-TA--------AGT---AAAAC-TGGGGTCAG
gi|97934 : AGTTATAA-CATTTCAAAA-AG----T-T-G-AGCT-GA-G-----GAAAA---TCCCATGTT---AA---ATG-T-TT--------AAT---GAAAC-TGGGACC
gi|97935 : AGTTATGA-CATTTAAAAT-TT----T-T-G-AATT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TTATATAATAAGT---GAAAC-TGGAGCC
gi|97936 : AGTTCTAG-CACTTCAAAG-AT----T-TTGTAGTT-GA-G-----GAAAA---TCTCCAGTTG--AG---ATG-C-TT--------GGT---TAAAC-TGGGACC
gi|97937 : TATAG-TATTTCAAAA--T----T-T-A-CGTT-TA-G-----CAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TGGGGC
gi|97938 : agttaAGTTATAAACATT-CTAAA-TT----T-T-A-AGTT-GA-G-----AAAAAAAATCTCAAGTTC--AG---ATG-T-TT--------CGT---GAAGC-CGGAGCCAG
gi|97939 : AGTTATAA-TATTTCAAAA-CT----T-T-G----T-G--------GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGAACCAG
gi|97940 : AGCTATAT-CATTTCAAAA-AT----T---G-CGAT-GA-G-----GAAAA---TCTCAAGTTG--AT---ATG-T-TT--------AGT---AAAAC-TGAGACCA
gi|97941 : AGTTATTG-CATTTTAAAA-AA----A-T-G-GGTT-GA-G-----GAAAA---TCTAAAGTTG--GG---ATG-A-TT--------AGT---GAAAC-TGGGATCAG
gi|97942 : AGATATAG-CATTTTTAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TA--------AGT---GAAAC-
gi|97943 : AGTTGCAG-CATTTCAAAA-AT----C-T-G-ATTT-GA-A-----GAAAA---ACTCAAGTCA--AG---ATG-TAAG--------AGT---GAAAC-TGGGGCCAG
gi|97944 : AGTTATGA-CAATTAAAAA-AT----A-T-G-AGCT-GA-G-----GAAAA---TATCAAGTTG--AG---ATG-T-TT--------ATT---AAAAC-TG
gi|97945 : AGTTATAG-CATTC---AA-AT----T-T---------A-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------GAT---GTAAC-TGGGACCAG
gi|97946 : AATTGTAG-CATTTCAAAA-GT----T-T-G-AGCT-GA-G-----GAATA---TCTCAATTTG--TG---TTG-A-TT--------AGT---GAAAC-TGGGGC
gi|97947 : AGTTATAA-CCTTTCAAAA-AT----T-T-A-AGTT-GA-G-----AAAGG---TCTTAAATTG--AG---ATG-T-TA--------AGT---GAAAC-TGGG
gi|97949 : AGTTATAG-CATTTCAAAA-AT----T-------------A-----GAAAA---TTTCAAGTTG--AA---GTA-T-TT--------AAT---GAAAC-TGGGGCTAG
gi|97950 : AATTATAG-CATTTAGAAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CG---ATA-T-TT--------TGT---GAAAC-
gi|97951 : AGTTATAA-CATTTCAAAA-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAA---------------------------ACT---GAAAC-TGGGGCCAG
gi|97952 : AGTTATAA-CATTAAAGAA-AC----T---G-ACTT-GATG-----GAA-----TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGC
gi|97969 : GTTATAG-CAATTCAGAA-AT----T-T-G-AGTT-GA-A-----GTAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGGGACTA
gi|97970 : GTTATAA-CATTTCAAC---T----T-T-G-AGTT-GA-G-----GAAAA---CCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGACCAG
gi|97975 : TTATAG-AAATTAAAAA-AA----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGTG--GAAAC-T-GGGCCAG
gi|97980 : TTATAA-CATTTCAAAA-CT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTGA--AG---ATG-C-TC--------AGT---GAACC-TGGAGCCAG
gi|97981 : AAA-AT----C-T-G-AGTT-AA-G-----GAAAC---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TAGGGCCAG
gi|97983 : ttaagagatttgaacTTGTAG-AATTTCAAAC-TT----T-T-G-AGTT-GA-G-----GAAAT---TCTTAACTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGCCCCAG
gi|97984 : TTATAG-TATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG-----------------------AGT---GAAAC-TTGGGCC
gi|97985 : T----T-T-T-AGTT-GA-G-----AAAAA---TTTCAGTTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGACCCAG
gi|97988 : ttagaaaaattaaacatT----T-T-G-AGTT-GA-G-----GAAAA---TCTCACCTTG--AG---ATG-T-TT--------AGT---GAAAC-TG
gi|97992 : ttacagaaattgagatatAGAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------GGT---GAAA
gi|97993 : ttagagaaatcgTTACAG-AAATTCAGAA-TT----G-T-G-AGTT-CA-G-----GAAAA---ACTGAAGTTG--GG---ATG-T-TT--------AGT---T---C-TGGAGCCA
gi|97994 : AAAA-AA----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGTTTG--AG---ATG-T-TT--------CGT---GAAAC-AGGGTCC
gi|98009 : ttctagaaaTGTAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCATGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGTGGCAAG
gi|98010 : CAAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TC--------ACT---GAAAT-TGGTGCC
gi|98011 : tgtagtaacaTATAG-CACTTCCAAT-AT----T-T-G-AGTT-AA-A-----GAAAA---TTTCAAGTTA--GG---ATA-T-TT--------AGT---GAAAC-AGGGGCC
gi|98012 : AAA-TT----T-T-G-AGTT-AC-A-----GAAAA---TCTCAACTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGCGC
gi|98016 : tagagaaattggATAG-CAATTAAAAA-AT----T-T-G-AGAT-GA-G-----GAAAA---TCTGAAGTTG--AG---TTG-T-TT--------AGT---ATAAC-TGGGGCCAG
gi|98018 : ATAG-CATCTCAAAA-AT----A-T-G-AGTT-GT-A-----GAATA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGCCC
gi|98019 : AGTTCAAA-CATTTCAATG-AA----T-A-G-AGTT-GA-GAA---GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAGC-TAGGACC
gi|98021 : atagAAAA-ATG---T-T-G-AGTTTGA-G-----GGAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GGATC-TGGGGCCAG
gi|98022 : tagaaatT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGG---GAATC-TGAGGCC
gi|98023 : tagaaaattgagattAAGA-TT----T-T-G-GGTT-GA-G-----GAAAG---TCTCAAATTG--AG---ATG-T-TT--------AGT---G-AAC-TG
gi|98027 : tagataatctTTTAAAT-TT----T-T-G-AATT-GA-G-----GAAAA---TCTCAACTAG--AA---ATG-T-TT--------AGT---GAAAC-TGG
gi|98030 : agaaa-AT----C-T-G-AGAT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98031 : agaaattgagatT----T-T-G-AGTT-GA-G-----GAGAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98042 : agaaattgaattgTTGAGAA-TT----T-T-C-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ACG-T-TT--------AGT---GAAAC---AGGCC
gi|98044 : aaATTTAAAAA-AA----T---G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGC---GAAAC-TGGACCCAG
gi|98045 : TTAAAATAT----C-T-G-AGTT-GA-G-----GAAAA---TCTTAGGTTA--AA---ATG-T-TT--------AGT---GAAAC-CGGGACCAG
gi|98046 : aTTCAAAA-GT----T-T-G-AGTT-GA-GA----GAAAAG--TATCAAGTTG--AG---ATG---TT--------AGT---GAAAC-TGAGGTCA
gi|98050 : aTTCAGAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AG---ATG-T-TT--------AGT---GAAAT-TGGGACCAG
gi|98051 : TTCAAAA-AA----T-T-G-AGTT-TA-G-----GAAAA---TCTCAAGTTG--AG---AAG-T-TT--------AGT---GAAAC-
gi|98052 : TTCGAAA-AT----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGTC
gi|98053 : TTCAAAA-AC----T---G-TGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGTGCCA
gi|98054 : TTCAAAA-AT----T-T-A-AGTT-GA-T-----GAAAA---CATCAAGCTG--AG---ATG-T-TT--------AGT---GAAAC-TGCGACCGG
gi|98055 : TTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AA---ACC-T-TT--------ATT---GAAAC-TGGG
gi|98056 : TTCAAAA-AA----T-T-G-AGTTTAA-G-----AAAAA---TCTCAAGTTT--AG---ATG-T-TT--------AGT---GAAAA-TGGGGCCA
gi|98057 : TTTAAAT-AT----T-T-G-AGTT-AA-GCAAAGGAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGC
gi|98058 : TTTGAAG-AT----T-T-G-TGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98059 : TTCAAAA-TA----T-T-A-AGTT-AA-G-----GAATA---TCTCAAGTTA--AA---ATG-T-TA--------AGT---GAAAC-TGGGGCCA
gi|98060 : TTCAAAG-AT----A-T-G-AGTT-GA-G-----G-AAC---TCTCAACTTG--AA---ATG-T-TT--------GGT---GAAG--TGGGGCCAG
gi|98061 : TTTAAAA-AA----A-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CA---ATG-T-TT--------AGT---GAAAT-TTGGGCTAG
gi|98062 : TTCAAAA-CT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAATTGATAT---ATG-T-TT--------AGT---AAAAC-TAGGATCAG
gi|98063 : TTCAGAA-AT----TAT-T-ATTT-AA-G-----GGACA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCC
gi|98064 : TTCAAAC-AT----T-T-C-AGTT-GA-G-----GAAAT---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GGCAT-TAGGGCC
gi|98065 : TTAAAAA-AT----T-T-A-AATT-GA-G-----GAAAA---TTTCAAGCTG--AG---ATG-T-GT--------TGT---GAAAC-TGGAACC
gi|98066 : TTCAAAA-GTAAGTT-T-G-AATT-GA-G-----GAGAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GTAAG-CGGAGC
gi|98072 : TTAAAC-AT----T-T-A-AGTT-CA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGACC
gi|98073 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98074 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98076 : AAAA-AT--------G-AGTT-GA-G-----GAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGAAGTC
gi|98077 : AAAG-AT----T-T-G-TGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GAATC-TTAGGCTA
gi|98084 : -AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTA--AG---ACG-T-TT--------GAT---AAAGC-TGCGGCCAG
gi|98085 : -AT----C-T-G-AGCT-GA-A-----GAAAA---TCTCAAGCTG--AG---CTG-T-TT--------ATT---GGAAC-TGGAGCCAG
gi|98089 : T----T-T-C-AGTT-GA-A-----AAAAA---TCTCAAGTTG--AG---ATG-C-TT--------AGT---GAAACATGGGGTCAG
Alignments
lowQualScore : 0 0 1111 0 0 0 0 0 22222 111 00 000 0 0 11111111 111 1
lowQualScore : . . .... . . . . . ..... ... .. ... . . ........ ... .
lowQualScore : 7 4 3333 4 4 4 8 4 00000 111 55 777 4 4 44444444 111 2
consensus : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
Reference ( family-188 ) : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97903 : AGTTATAG-CAAGTCAAAA-GT----T-T-G-AGTT-GA-G-----GCAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGTCC
gi|97904 : AGTTATAG-CATTTGGAAC-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97905 : AGTTACAG-CATTTCAAAA-AA----T-T-G-AGCT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGCCAG
gi|97906 : AGTTATAG-CTCTTCATAA-AA----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97907 : AGTTCTAG-CAATTCAAAA-TT----T-C-G-AGTT-GA-G-----GAAAA---CCTTAAGTTG--AG---ATG-T-TG--------AGT---GAAAC-TGGGGCCAG
gi|97908 : AGTTAAAA-CATTTAAAGA-AT----T-T-G-GGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-C-TT--------TGT---GAAAC-TGGGGCCAG
gi|97909 : AGTCACGG-CATTTCAAAA-AT----T-T-G-AATT-CA-G-----GAAAA---ACTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCCAG
gi|97911 : AGTTATAG-CGTTTCAAAT-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GCAAC-TAGAACC
gi|97912 : AGTTATAG-GATTTCAAAA-AT----T---A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGG
gi|97913 : AGTTACAG-TATTTCAAAA-AA----T-T-G-AGCT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TTGGGCC
gi|97914 : AGTTACAA-TATTTCAAAA-AA----T-T-T-AGTT-GT-G-----GAAAA---TCTTAAGTTG--AG---ATG-C-TT--------AGT---GAAAC-TGAGGTCA
gi|97915 : AATTATAG-CCTTT-AATG-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCC
gi|97916 : AGTTTTAG-CATTTCAAAA-GT----T-T-G-AGTT-GA-G-----GAAAA---TGTCAAGTTG--AG---ATG-T-TT--------AGT---GAACA-TGGGACC
gi|97917 : AGTTATCG-AAAGTAAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAAGTTG--AG---ATG-C-TT--------GGT---GAAAC-CGGGGCC
gi|97918 : AGTTATAA-CATTTTAAAT-AT----T-T-G-AGTC-GA-G-----GAAAA---TCTTAAGTTG--AG---ATGTT-TT--------AGT---GAAAC-TGGGGTC
gi|97919 : AGTTATAC-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AC---ATG-T-TT--------AGT---GAAAC-GGGAGTCGG
gi|97920 : AGTTACAG-CTTTTCAAAA-CT----C-T-G-AGTT-GA-T-----GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGAGGTCAG
gi|97922 : AGTTATAG-CTTTTCAAAG-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-A-TT--------AAT---GAAAC-TGGG
gi|97923 : AGTTATAG-CTTTTCAAAA-AC----T-T-G-AGTT-GG-G-----GAAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGTTTATAAAC-TGGGACC
gi|97924 : AGTTATAG-TCTTTTAAAG-AT----C-T-G-AGTT-GA-A-----GAATC---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGGGGCTAG
gi|97925 : AGTTATAG-CATTGCAAAT-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTA--AG---ATG-T-TT--------AGT---GAAAC-TTGG
gi|97926 : AATTATAA-AATTT-AAAA-GT----T-T-G-AGAT-TA-A-----GAAAA---TCTCAAGTTG--AG---ATG-T-AT--------AAT---GAAAC-TGGGACC
gi|97927 : AGTGATAG-CATTTCAAAT-AT----T-T-G-AGAT-GA-G-----GGATA---TCTCAAGTTG--AG---ATA-T-TC--------AGT---AAAAC-TGGGGCC
gi|97928 : AGTTATCG-AAAGTCAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAATTTG--AG---ATA-C-TT--------GGT---GAAAC-CGTGGCC
gi|97930 : AGTTATAG-CCTTTTAAAT-AT----T-T-G-ATTT-GA-G-----GAAAA---TTTCAAGTTG--AG---ATA-T-TT--------GAT---GAAAC-TAGAGCCAG
gi|97931 : AGTTATAG-CATTTTAAAA-AT----T-T-G-AGTA-GC-G-----GGAAA---TCTAAAGTTG--AG---ATG-T-AT--------AGT---GAAAC-TGTAGCCGG
gi|97932 : AGTTATAA-CATTTTAAAC-AT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AGATCATG-T-TT--------ATT---GAAAC-TTAGGTCAG
gi|97933 : AGTTATAG-CACTTCAAGA-TT----T-T-G-AGAT-GA-G-----GAAAA---CCTAAAGCTA--AG---ATG-T-TA--------AGT---AAAAC-TGGGGTCAG
gi|97934 : AGTTATAA-CATTTCAAAA-AG----T-T-G-AGCT-GA-G-----GAAAA---TCCCATGTT---AA---ATG-T-TT--------AAT---GAAAC-TGGGACC
gi|97935 : AGTTATGA-CATTTAAAAT-TT----T-T-G-AATT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TTATATAATAAGT---GAAAC-TGGAGCC
gi|97936 : AGTTCTAG-CACTTCAAAG-AT----T-TTGTAGTT-GA-G-----GAAAA---TCTCCAGTTG--AG---ATG-C-TT--------GGT---TAAAC-TGGGACC
gi|97937 : TATAG-TATTTCAAAA--T----T-T-A-CGTT-TA-G-----CAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TGGGGC
gi|97938 : agttaAGTTATAAACATT-CTAAA-TT----T-T-A-AGTT-GA-G-----AAAAAAAATCTCAAGTTC--AG---ATG-T-TT--------CGT---GAAGC-CGGAGCCAG
gi|97939 : AGTTATAA-TATTTCAAAA-CT----T-T-G----T-G--------GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGAACCAG
gi|97940 : AGCTATAT-CATTTCAAAA-AT----T---G-CGAT-GA-G-----GAAAA---TCTCAAGTTG--AT---ATG-T-TT--------AGT---AAAAC-TGAGACCA
gi|97941 : AGTTATTG-CATTTTAAAA-AA----A-T-G-GGTT-GA-G-----GAAAA---TCTAAAGTTG--GG---ATG-A-TT--------AGT---GAAAC-TGGGATCAG
gi|97942 : AGATATAG-CATTTTTAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TA--------AGT---GAAAC-
gi|97943 : AGTTGCAG-CATTTCAAAA-AT----C-T-G-ATTT-GA-A-----GAAAA---ACTCAAGTCA--AG---ATG-TAAG--------AGT---GAAAC-TGGGGCCAG
gi|97944 : AGTTATGA-CAATTAAAAA-AT----A-T-G-AGCT-GA-G-----GAAAA---TATCAAGTTG--AG---ATG-T-TT--------ATT---AAAAC-TG
gi|97945 : AGTTATAG-CATTC---AA-AT----T-T---------A-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------GAT---GTAAC-TGGGACCAG
gi|97946 : AATTGTAG-CATTTCAAAA-GT----T-T-G-AGCT-GA-G-----GAATA---TCTCAATTTG--TG---TTG-A-TT--------AGT---GAAAC-TGGGGC
gi|97947 : AGTTATAA-CCTTTCAAAA-AT----T-T-A-AGTT-GA-G-----AAAGG---TCTTAAATTG--AG---ATG-T-TA--------AGT---GAAAC-TGGG
gi|97949 : AGTTATAG-CATTTCAAAA-AT----T-------------A-----GAAAA---TTTCAAGTTG--AA---GTA-T-TT--------AAT---GAAAC-TGGGGCTAG
gi|97950 : AATTATAG-CATTTAGAAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CG---ATA-T-TT--------TGT---GAAAC-
gi|97951 : AGTTATAA-CATTTCAAAA-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAA---------------------------ACT---GAAAC-TGGGGCCAG
gi|97952 : AGTTATAA-CATTAAAGAA-AC----T---G-ACTT-GATG-----GAA-----TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGC
gi|97969 : GTTATAG-CAATTCAGAA-AT----T-T-G-AGTT-GA-A-----GTAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGGGACTA
gi|97970 : GTTATAA-CATTTCAAC---T----T-T-G-AGTT-GA-G-----GAAAA---CCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGACCAG
gi|97975 : TTATAG-AAATTAAAAA-AA----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGTG--GAAAC-T-GGGCCAG
gi|97980 : TTATAA-CATTTCAAAA-CT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTGA--AG---ATG-C-TC--------AGT---GAACC-TGGAGCCAG
gi|97981 : AAA-AT----C-T-G-AGTT-AA-G-----GAAAC---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TAGGGCCAG
gi|97983 : ttaagagatttgaacTTGTAG-AATTTCAAAC-TT----T-T-G-AGTT-GA-G-----GAAAT---TCTTAACTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGCCCCAG
gi|97984 : TTATAG-TATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG-----------------------AGT---GAAAC-TTGGGCC
gi|97985 : T----T-T-T-AGTT-GA-G-----AAAAA---TTTCAGTTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGACCCAG
gi|97988 : ttagaaaaattaaacatT----T-T-G-AGTT-GA-G-----GAAAA---TCTCACCTTG--AG---ATG-T-TT--------AGT---GAAAC-TG
gi|97992 : ttacagaaattgagatatAGAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------GGT---GAAA
gi|97993 : ttagagaaatcgTTACAG-AAATTCAGAA-TT----G-T-G-AGTT-CA-G-----GAAAA---ACTGAAGTTG--GG---ATG-T-TT--------AGT---T---C-TGGAGCCA
gi|97994 : AAAA-AA----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGTTTG--AG---ATG-T-TT--------CGT---GAAAC-AGGGTCC
gi|98009 : ttctagaaaTGTAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCATGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGTGGCAAG
gi|98010 : CAAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TC--------ACT---GAAAT-TGGTGCC
gi|98011 : tgtagtaacaTATAG-CACTTCCAAT-AT----T-T-G-AGTT-AA-A-----GAAAA---TTTCAAGTTA--GG---ATA-T-TT--------AGT---GAAAC-AGGGGCC
gi|98012 : AAA-TT----T-T-G-AGTT-AC-A-----GAAAA---TCTCAACTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGCGC
gi|98016 : tagagaaattggATAG-CAATTAAAAA-AT----T-T-G-AGAT-GA-G-----GAAAA---TCTGAAGTTG--AG---TTG-T-TT--------AGT---ATAAC-TGGGGCCAG
gi|98018 : ATAG-CATCTCAAAA-AT----A-T-G-AGTT-GT-A-----GAATA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGCCC
gi|98019 : AGTTCAAA-CATTTCAATG-AA----T-A-G-AGTT-GA-GAA---GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAGC-TAGGACC
gi|98021 : atagAAAA-ATG---T-T-G-AGTTTGA-G-----GGAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GGATC-TGGGGCCAG
gi|98022 : tagaaatT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGG---GAATC-TGAGGCC
gi|98023 : tagaaaattgagattAAGA-TT----T-T-G-GGTT-GA-G-----GAAAG---TCTCAAATTG--AG---ATG-T-TT--------AGT---G-AAC-TG
gi|98027 : tagataatctTTTAAAT-TT----T-T-G-AATT-GA-G-----GAAAA---TCTCAACTAG--AA---ATG-T-TT--------AGT---GAAAC-TGG
gi|98030 : agaaa-AT----C-T-G-AGAT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98031 : agaaattgagatT----T-T-G-AGTT-GA-G-----GAGAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98042 : agaaattgaattgTTGAGAA-TT----T-T-C-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ACG-T-TT--------AGT---GAAAC---AGGCC
gi|98044 : aaATTTAAAAA-AA----T---G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGC---GAAAC-TGGACCCAG
gi|98045 : TTAAAATAT----C-T-G-AGTT-GA-G-----GAAAA---TCTTAGGTTA--AA---ATG-T-TT--------AGT---GAAAC-CGGGACCAG
gi|98046 : aTTCAAAA-GT----T-T-G-AGTT-GA-GA----GAAAAG--TATCAAGTTG--AG---ATG---TT--------AGT---GAAAC-TGAGGTCA
gi|98050 : aTTCAGAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AG---ATG-T-TT--------AGT---GAAAT-TGGGACCAG
gi|98051 : TTCAAAA-AA----T-T-G-AGTT-TA-G-----GAAAA---TCTCAAGTTG--AG---AAG-T-TT--------AGT---GAAAC-
gi|98052 : TTCGAAA-AT----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGTC
gi|98053 : TTCAAAA-AC----T---G-TGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGTGCCA
gi|98054 : TTCAAAA-AT----T-T-A-AGTT-GA-T-----GAAAA---CATCAAGCTG--AG---ATG-T-TT--------AGT---GAAAC-TGCGACCGG
gi|98055 : TTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AA---ACC-T-TT--------ATT---GAAAC-TGGG
gi|98056 : TTCAAAA-AA----T-T-G-AGTTTAA-G-----AAAAA---TCTCAAGTTT--AG---ATG-T-TT--------AGT---GAAAA-TGGGGCCA
gi|98057 : TTTAAAT-AT----T-T-G-AGTT-AA-GCAAAGGAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGC
gi|98058 : TTTGAAG-AT----T-T-G-TGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98059 : TTCAAAA-TA----T-T-A-AGTT-AA-G-----GAATA---TCTCAAGTTA--AA---ATG-T-TA--------AGT---GAAAC-TGGGGCCA
gi|98060 : TTCAAAG-AT----A-T-G-AGTT-GA-G-----G-AAC---TCTCAACTTG--AA---ATG-T-TT--------GGT---GAAG--TGGGGCCAG
gi|98061 : TTTAAAA-AA----A-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CA---ATG-T-TT--------AGT---GAAAT-TTGGGCTAG
gi|98062 : TTCAAAA-CT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAATTGATAT---ATG-T-TT--------AGT---AAAAC-TAGGATCAG
gi|98063 : TTCAGAA-AT----TAT-T-ATTT-AA-G-----GGACA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCC
gi|98064 : TTCAAAC-AT----T-T-C-AGTT-GA-G-----GAAAT---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GGCAT-TAGGGCC
gi|98065 : TTAAAAA-AT----T-T-A-AATT-GA-G-----GAAAA---TTTCAAGCTG--AG---ATG-T-GT--------TGT---GAAAC-TGGAACC
gi|98066 : TTCAAAA-GTAAGTT-T-G-AATT-GA-G-----GAGAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GTAAG-CGGAGC
gi|98072 : TTAAAC-AT----T-T-A-AGTT-CA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGACC
gi|98073 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98074 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98076 : AAAA-AT--------G-AGTT-GA-G-----GAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGAAGTC
gi|98077 : AAAG-AT----T-T-G-TGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GAATC-TTAGGCTA
gi|98084 : -AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTA--AG---ACG-T-TT--------GAT---AAAGC-TGCGGCCAG
gi|98085 : -AT----C-T-G-AGCT-GA-A-----GAAAA---TCTCAAGCTG--AG---CTG-T-TT--------ATT---GGAAC-TGGAGCCAG
gi|98089 : T----T-T-C-AGTT-GA-A-----AAAAA---TCTCAAGTTG--AG---ATG-C-TT--------AGT---GAAACATGGGGTCAG
blockSeqs : AAGT CAAAG AAA ATATAATA TTA T
blockSeqs : G AA G . G T
blockSeqs : . A . . . A
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . .
blockSeqCons :
originalCons : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
finalCons : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
Alignments
lowQualScore : 0 0 1111 0 0 0 0 0 22222 111 00 000 0 0 11111111 111 1
lowQualScore : . . .... . . . . . ..... ... .. ... . . ........ ... .
lowQualScore : 7 4 3333 4 4 4 8 4 00000 111 55 777 4 4 44444444 111 2
consensus : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
Reference ( family-188 ) : AGTTATAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97903 : AGTTATAG-CAAGTCAAAA-GT----T-T-G-AGTT-GA-G-----GCAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGTCC
gi|97904 : AGTTATAG-CATTTGGAAC-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97905 : AGTTACAG-CATTTCAAAA-AA----T-T-G-AGCT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGCCAG
gi|97906 : AGTTATAG-CTCTTCATAA-AA----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCCAG
gi|97907 : AGTTCTAG-CAATTCAAAA-TT----T-C-G-AGTT-GA-G-----GAAAA---CCTTAAGTTG--AG---ATG-T-TG--------AGT---GAAAC-TGGGGCCAG
gi|97908 : AGTTAAAA-CATTTAAAGA-AT----T-T-G-GGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-C-TT--------TGT---GAAAC-TGGGGCCAG
gi|97909 : AGTCACGG-CATTTCAAAA-AT----T-T-G-AATT-CA-G-----GAAAA---ACTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCCAG
gi|97911 : AGTTATAG-CGTTTCAAAT-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GCAAC-TAGAACC
gi|97912 : AGTTATAG-GATTTCAAAA-AT----T---A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGG
gi|97913 : AGTTACAG-TATTTCAAAA-AA----T-T-G-AGCT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TTGGGCC
gi|97914 : AGTTACAA-TATTTCAAAA-AA----T-T-T-AGTT-GT-G-----GAAAA---TCTTAAGTTG--AG---ATG-C-TT--------AGT---GAAAC-TGAGGTCA
gi|97915 : AATTATAG-CCTTT-AATG-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGCC
gi|97916 : AGTTTTAG-CATTTCAAAA-GT----T-T-G-AGTT-GA-G-----GAAAA---TGTCAAGTTG--AG---ATG-T-TT--------AGT---GAACA-TGGGACC
gi|97917 : AGTTATCG-AAAGTAAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAAGTTG--AG---ATG-C-TT--------GGT---GAAAC-CGGGGCC
gi|97918 : AGTTATAA-CATTTTAAAT-AT----T-T-G-AGTC-GA-G-----GAAAA---TCTTAAGTTG--AG---ATGTT-TT--------AGT---GAAAC-TGGGGTC
gi|97919 : AGTTATAC-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AC---ATG-T-TT--------AGT---GAAAC-GGGAGTCGG
gi|97920 : AGTTACAG-CTTTTCAAAA-CT----C-T-G-AGTT-GA-T-----GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGAGGTCAG
gi|97922 : AGTTATAG-CTTTTCAAAG-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-A-TT--------AAT---GAAAC-TGGG
gi|97923 : AGTTATAG-CTTTTCAAAA-AC----T-T-G-AGTT-GG-G-----GAAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGTTTATAAAC-TGGGACC
gi|97924 : AGTTATAG-TCTTTTAAAG-AT----C-T-G-AGTT-GA-A-----GAATC---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAT-TGGGGCTAG
gi|97925 : AGTTATAG-CATTGCAAAT-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTA--AG---ATG-T-TT--------AGT---GAAAC-TTGG
gi|97926 : AATTATAA-AATTT-AAAA-GT----T-T-G-AGAT-TA-A-----GAAAA---TCTCAAGTTG--AG---ATG-T-AT--------AAT---GAAAC-TGGGACC
gi|97927 : AGTGATAG-CATTTCAAAT-AT----T-T-G-AGAT-GA-G-----GGATA---TCTCAAGTTG--AG---ATA-T-TC--------AGT---AAAAC-TGGGGCC
gi|97928 : AGTTATCG-AAAGTCAAAA-GT----T-T-A-AGTT-GA-G-----GAAAA---ACTCAATTTG--AG---ATA-C-TT--------GGT---GAAAC-CGTGGCC
gi|97930 : AGTTATAG-CCTTTTAAAT-AT----T-T-G-ATTT-GA-G-----GAAAA---TTTCAAGTTG--AG---ATA-T-TT--------GAT---GAAAC-TAGAGCCAG
gi|97931 : AGTTATAG-CATTTTAAAA-AT----T-T-G-AGTA-GC-G-----GGAAA---TCTAAAGTTG--AG---ATG-T-AT--------AGT---GAAAC-TGTAGCCGG
gi|97932 : AGTTATAA-CATTTTAAAC-AT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AGATCATG-T-TT--------ATT---GAAAC-TTAGGTCAG
gi|97933 : AGTTATAG-CACTTCAAGA-TT----T-T-G-AGAT-GA-G-----GAAAA---CCTAAAGCTA--AG---ATG-T-TA--------AGT---AAAAC-TGGGGTCAG
gi|97934 : AGTTATAA-CATTTCAAAA-AG----T-T-G-AGCT-GA-G-----GAAAA---TCCCATGTT---AA---ATG-T-TT--------AAT---GAAAC-TGGGACC
gi|97935 : AGTTATGA-CATTTAAAAT-TT----T-T-G-AATT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TTATATAATAAGT---GAAAC-TGGAGCC
gi|97936 : AGTTCTAG-CACTTCAAAG-AT----T-TTGTAGTT-GA-G-----GAAAA---TCTCCAGTTG--AG---ATG-C-TT--------GGT---TAAAC-TGGGACC
gi|97937 : TATAG-TATTTCAAAA--T----T-T-A-CGTT-TA-G-----CAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AAT---GAAAC-TGGGGC
gi|97938 : agttaAGTTATAAACATT-CTAAA-TT----T-T-A-AGTT-GA-G-----AAAAAAAATCTCAAGTTC--AG---ATG-T-TT--------CGT---GAAGC-CGGAGCCAG
gi|97939 : AGTTATAA-TATTTCAAAA-CT----T-T-G----T-G--------GAAAA---TCTCATGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGAACCAG
gi|97940 : AGCTATAT-CATTTCAAAA-AT----T---G-CGAT-GA-G-----GAAAA---TCTCAAGTTG--AT---ATG-T-TT--------AGT---AAAAC-TGAGACCA
gi|97941 : AGTTATTG-CATTTTAAAA-AA----A-T-G-GGTT-GA-G-----GAAAA---TCTAAAGTTG--GG---ATG-A-TT--------AGT---GAAAC-TGGGATCAG
gi|97942 : AGATATAG-CATTTTTAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TA--------AGT---GAAAC-
gi|97943 : AGTTGCAG-CATTTCAAAA-AT----C-T-G-ATTT-GA-A-----GAAAA---ACTCAAGTCA--AG---ATG-TAAG--------AGT---GAAAC-TGGGGCCAG
gi|97944 : AGTTATGA-CAATTAAAAA-AT----A-T-G-AGCT-GA-G-----GAAAA---TATCAAGTTG--AG---ATG-T-TT--------ATT---AAAAC-TG
gi|97945 : AGTTATAG-CATTC---AA-AT----T-T---------A-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------GAT---GTAAC-TGGGACCAG
gi|97946 : AATTGTAG-CATTTCAAAA-GT----T-T-G-AGCT-GA-G-----GAATA---TCTCAATTTG--TG---TTG-A-TT--------AGT---GAAAC-TGGGGC
gi|97947 : AGTTATAA-CCTTTCAAAA-AT----T-T-A-AGTT-GA-G-----AAAGG---TCTTAAATTG--AG---ATG-T-TA--------AGT---GAAAC-TGGG
gi|97949 : AGTTATAG-CATTTCAAAA-AT----T-------------A-----GAAAA---TTTCAAGTTG--AA---GTA-T-TT--------AAT---GAAAC-TGGGGCTAG
gi|97950 : AATTATAG-CATTTAGAAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CG---ATA-T-TT--------TGT---GAAAC-
gi|97951 : AGTTATAA-CATTTCAAAA-AT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAA---------------------------ACT---GAAAC-TGGGGCCAG
gi|97952 : AGTTATAA-CATTAAAGAA-AC----T---G-ACTT-GATG-----GAA-----TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAACTTGGGGC
gi|97969 : GTTATAG-CAATTCAGAA-AT----T-T-G-AGTT-GA-A-----GTAAA---TCTCAAGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGGGACTA
gi|97970 : GTTATAA-CATTTCAAC---T----T-T-G-AGTT-GA-G-----GAAAA---CCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGACCAG
gi|97975 : TTATAG-AAATTAAAAA-AA----T-T-G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGTG--GAAAC-T-GGGCCAG
gi|97980 : TTATAA-CATTTCAAAA-CT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTGA--AG---ATG-C-TC--------AGT---GAACC-TGGAGCCAG
gi|97981 : AAA-AT----C-T-G-AGTT-AA-G-----GAAAC---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TAGGGCCAG
gi|97983 : ttaagagatttgaacTTGTAG-AATTTCAAAC-TT----T-T-G-AGTT-GA-G-----GAAAT---TCTTAACTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGCCCCAG
gi|97984 : TTATAG-TATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG-----------------------AGT---GAAAC-TTGGGCC
gi|97985 : T----T-T-T-AGTT-GA-G-----AAAAA---TTTCAGTTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGACCCAG
gi|97988 : ttagaaaaattaaacatT----T-T-G-AGTT-GA-G-----GAAAA---TCTCACCTTG--AG---ATG-T-TT--------AGT---GAAAC-TG
gi|97992 : ttacagaaattgagatatAGAA-AT----C-T-G-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------GGT---GAAA
gi|97993 : ttagagaaatcgTTACAG-AAATTCAGAA-TT----G-T-G-AGTT-CA-G-----GAAAA---ACTGAAGTTG--GG---ATG-T-TT--------AGT---T---C-TGGAGCCA
gi|97994 : AAAA-AA----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGTTTG--AG---ATG-T-TT--------CGT---GAAAC-AGGGTCC
gi|98009 : ttctagaaaTGTAG-CATTTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCATGTTG--AA---ATG-T-TT--------AGT---GAAAC-TGTGGCAAG
gi|98010 : CAAAA-AT----T-T-G-AGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TC--------ACT---GAAAT-TGGTGCC
gi|98011 : tgtagtaacaTATAG-CACTTCCAAT-AT----T-T-G-AGTT-AA-A-----GAAAA---TTTCAAGTTA--GG---ATA-T-TT--------AGT---GAAAC-AGGGGCC
gi|98012 : AAA-TT----T-T-G-AGTT-AC-A-----GAAAA---TCTCAACTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGCGC
gi|98016 : tagagaaattggATAG-CAATTAAAAA-AT----T-T-G-AGAT-GA-G-----GAAAA---TCTGAAGTTG--AG---TTG-T-TT--------AGT---ATAAC-TGGGGCCAG
gi|98018 : ATAG-CATCTCAAAA-AT----A-T-G-AGTT-GT-A-----GAATA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGCCC
gi|98019 : AGTTCAAA-CATTTCAATG-AA----T-A-G-AGTT-GA-GAA---GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAGC-TAGGACC
gi|98021 : atagAAAA-ATG---T-T-G-AGTTTGA-G-----GGAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GGATC-TGGGGCCAG
gi|98022 : tagaaatT----T-T-A-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGG---GAATC-TGAGGCC
gi|98023 : tagaaaattgagattAAGA-TT----T-T-G-GGTT-GA-G-----GAAAG---TCTCAAATTG--AG---ATG-T-TT--------AGT---G-AAC-TG
gi|98027 : tagataatctTTTAAAT-TT----T-T-G-AATT-GA-G-----GAAAA---TCTCAACTAG--AA---ATG-T-TT--------AGT---GAAAC-TGG
gi|98030 : agaaa-AT----C-T-G-AGAT-GA-G-----GAAAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98031 : agaaattgagatT----T-T-G-AGTT-GA-G-----GAGAA---TCTCAGCTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98042 : agaaattgaattgTTGAGAA-TT----T-T-C-AGTT-GA-G-----GAAAA---TCTCAGCTTG--AG---ACG-T-TT--------AGT---GAAAC---AGGCC
gi|98044 : aaATTTAAAAA-AA----T---G-AATT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGC---GAAAC-TGGACCCAG
gi|98045 : TTAAAATAT----C-T-G-AGTT-GA-G-----GAAAA---TCTTAGGTTA--AA---ATG-T-TT--------AGT---GAAAC-CGGGACCAG
gi|98046 : aTTCAAAA-GT----T-T-G-AGTT-GA-GA----GAAAAG--TATCAAGTTG--AG---ATG---TT--------AGT---GAAAC-TGAGGTCA
gi|98050 : aTTCAGAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTAG--AG---ATG-T-TT--------AGT---GAAAT-TGGGACCAG
gi|98051 : TTCAAAA-AA----T-T-G-AGTT-TA-G-----GAAAA---TCTCAAGTTG--AG---AAG-T-TT--------AGT---GAAAC-
gi|98052 : TTCGAAA-AT----T-T-G-AGTT-GA-G-----GTAAA---TCTCAGGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGTC
gi|98053 : TTCAAAA-AC----T---G-TGTT-GA-G-----GAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGGTGCCA
gi|98054 : TTCAAAA-AT----T-T-A-AGTT-GA-T-----GAAAA---CATCAAGCTG--AG---ATG-T-TT--------AGT---GAAAC-TGCGACCGG
gi|98055 : TTCAAAA-AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--AA---ACC-T-TT--------ATT---GAAAC-TGGG
gi|98056 : TTCAAAA-AA----T-T-G-AGTTTAA-G-----AAAAA---TCTCAAGTTT--AG---ATG-T-TT--------AGT---GAAAA-TGGGGCCA
gi|98057 : TTTAAAT-AT----T-T-G-AGTT-AA-GCAAAGGAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGGGGC
gi|98058 : TTTGAAG-AT----T-T-G-TGTT-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-TGG
gi|98059 : TTCAAAA-TA----T-T-A-AGTT-AA-G-----GAATA---TCTCAAGTTA--AA---ATG-T-TA--------AGT---GAAAC-TGGGGCCA
gi|98060 : TTCAAAG-AT----A-T-G-AGTT-GA-G-----G-AAC---TCTCAACTTG--AA---ATG-T-TT--------GGT---GAAG--TGGGGCCAG
gi|98061 : TTTAAAA-AA----A-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTG--CA---ATG-T-TT--------AGT---GAAAT-TTGGGCTAG
gi|98062 : TTCAAAA-CT----T-T-G-AATT-GA-G-----GAAAA---TCTCAAATTGATAT---ATG-T-TT--------AGT---AAAAC-TAGGATCAG
gi|98063 : TTCAGAA-AT----TAT-T-ATTT-AA-G-----GGACA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGGCC
gi|98064 : TTCAAAC-AT----T-T-C-AGTT-GA-G-----GAAAT---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GGCAT-TAGGGCC
gi|98065 : TTAAAAA-AT----T-T-A-AATT-GA-G-----GAAAA---TTTCAAGCTG--AG---ATG-T-GT--------TGT---GAAAC-TGGAACC
gi|98066 : TTCAAAA-GTAAGTT-T-G-AATT-GA-G-----GAGAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GTAAG-CGGAGC
gi|98072 : TTAAAC-AT----T-T-A-AGTT-CA-G-----AAAAA---TCTCAAGTTG--AG---ATG-T-TT--------AGT---GAAAC-CGGGACC
gi|98073 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98074 : TCAAAG-AT----A-T-G-AGTA-GA-G-----GAAAA---TCTTAAGTTG--AG---ATG-T-AT--------TGT---GAAAC-TGGCGCC
gi|98076 : AAAA-AT--------G-AGTT-GA-G-----GAAAA---TCTCAAATTG--AG---ATG-T-TT--------AGT---GAAAC-TGAAGTC
gi|98077 : AAAG-AT----T-T-G-TGTT-GA-G-----AAAAA---TCTCAAGTTG--AG---ATA-T-TT--------AGT---GAATC-TTAGGCTA
gi|98084 : -AT----T-T-G-AGTT-GA-G-----GAAAA---TCTCAAGTTA--AG---ACG-T-TT--------GAT---AAAGC-TGCGGCCAG
gi|98085 : -AT----C-T-G-AGCT-GA-A-----GAAAA---TCTCAAGCTG--AG---CTG-T-TT--------ATT---GGAAC-TGGAGCCAG
gi|98089 : T----T-T-C-AGTT-GA-A-----AAAAA---TCTCAAGTTG--AG---ATG-C-TT--------AGT---GAAACATGGGGTCAG