lowQualScore : 0 0 0 000 0 0
lowQualScore : . . . ... . .
lowQualScore : 4 4 4 777 4 8
consensus : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Reference ( gi|86227 ) : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86229 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86228 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86226 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86231 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86230 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86078 : TTAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86233 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86080 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAGCTTATATGAA
gi|86083 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86237 : tTTAGTTT-ATACTAATTT-ATTTTTAGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86236 : TTAGTTT-ATACTAATTT-ATTTT-AGA---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86084 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TAGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86085 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTAATATGAA
gi|86239 : tTTAGTTT-ATACCAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATGAA
gi|86240 : TTAGTTT-ATACTAATTT-GTTTT-AGC---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86087 : TTAGTTT-ATACCAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86242 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86241 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86088 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTT-AGAGCTTATATGAA
gi|86243 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATTAA
gi|86090 : TTAGTTC-ATACTAATTT-ATTTT-AGC---TCTATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86245 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGGCTTATTTGAA
gi|86093 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAATACTC-AGAGCTTATATGAA
gi|86091 : tTTAGTTT-ATTCTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86073 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAA-GAAAGCTC-AGAGCTTATATGAA
gi|86238 : tTTAGTTT-ATACTAATTC-ATTTC-AGC---TCGATTGCGAC-GAAAGCTC-AGAGCTTATATGAA
gi|86247 : TTAATTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAACTTATATGAA
gi|86096 : TTAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCTAT-GAAAGCTC-AGAGCTTATATGA
gi|86095 : tTTAGTTT-ATACTAATTT-ATTTT-AGT---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86094 : tTTAGTTT-ATATTAATTT-ATTTT-AGC---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86249 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTA-AGAGCTTTTATGAA
gi|86097 : TTATTTT-ATACAAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86250 : tTTAGTTT-ATTCTAATAT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86254 : TTAGTTT-GTACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTC-AGAGATTATATGAA
gi|86101 : TTAGTTC-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAATCTC-AGAGCTTATATAAA
gi|86104 : tTCAGTTT-ATACTAATTT-ATTTT-AGC---TCGATAGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86103 : tTTAGTT--ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86102 : tTTAGTTT-ATAGTAATTT-ATTTT-AGT---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86257 : tTTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAACTTATATGAA
gi|86256 : TTAGTTA-ATACTAATTT-ATTTT-AGC---TCAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86105 : TTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATA
gi|86108 : tTTAGTTT-GTACTAATTT-ATTTT-AGC---TTGATTGTGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86261 : tTTAGTTT-ATACTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAATTTC-AGAGCTTATATGAA
gi|86262 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGTCTTATATGAA
gi|86112 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTG-AGAGCTTATGAGAA
gi|86263 : tTTAGTTT-ATTCTAATTT-ATTTA-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86079 : TTAGTTT-ATGCTAATTT-ATTTT-TGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86264 : tTTAGTTT-ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGTGTTTATATGAA
gi|86115 : TTAGTTT-ATACTAATTT-AATTT-AGC---TCGTTTGCGAT-GAAAGCTC-AGAACTTATATGAA
gi|86114 : tTTAGTTT-ATACTTATTT-ATTTT-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTAAATGAA
gi|86117 : tTTAGTTT-ATACTACTTT-ATTTT-AGC---TCAACTGCGAT-GAAAGCTC-AGAGCTCATATGAA
gi|86100 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86099 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86268 : tTTAGTTT-ATACTAATTT-ATTTG-AGT---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86266 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATCGGGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86269 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATAGTGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86119 : TTATTTT-ATACTAATTT-ATTTT-AGC---TTAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86273 : tTTAGTTT-ATACTAATTT-AATTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAGCGTATATGA
gi|86272 : TTAGTTT-ATACTAATTT-ATATT-AGC---TTGATTGTGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86251 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGAATGCAAT-AAAAGCTC-AAAGCTTATATGAA
gi|86122 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86121 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86274 : tTTAGTTT-ATACTAATTT-CTTTT-AGA---ACGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86125 : TTAGTTT-ATACTTATTT-ATTTT-AGCGGCTCGATTGCGAT-GAAAGCTC-AGAGCTTATATG
gi|86127 : tTTAGTTT-ATACTAATTC-ATTTT-AGT---TTGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86131 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGATAT-GAAAGCTC-AGAGCTCGTATGAA
gi|86132 : tTTAGTTT-ATATTAATTT-CTTTT-AGC---TCGATTGCGGT-GAAAGCTC-AGAGCTAATATGAA
gi|86133 : tTTAATTT-CTACTAATTT-ATTTA-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86086 : tTTATTCT-ATACTAATTT-ATTTT-AGT---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86134 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---ACGATTGCGAT-GAATGCTC-GGAGCTTATATAAA
gi|86106 : tTTAGTTT-ATACTAATTT-ATTCT-AGC---TCGATAGCGAG-GAAAGCTC-GAAGCTTATATGAA
gi|86246 : tTTAGTTT-ATACTAATCT-ATTTT-AAC---TTTATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86259 : TTAGTTT-ATACTCATTT-ATTTT-AGT---TCGATTGCGAA-GAAAACTC-AGAGCTTATA-GAA
gi|86107 : TCAGTTT-ATACTAACTT-ATTTT-AGT---TCGATTACGAA-CAAAGCTC-AGAGCTTATATGAA
gi|86260 : tTTAGTTT-ATACTAATTA-ATTT--AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86110 : TTAGTTT-ATACTTATTT-ATTTT-ATC---TCGATTGCGAA-GAAAGCTC-AAAGATTATATGAA
gi|86270 : tTTAGTTT-ATACTTATTC-ATTTT-AGC---TTGATTGC-ATAGAAAGCTC-AGAGCTTATATGAA
gi|86265 : TTGGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTCATA
gi|86120 : TTACTTT-AAACTAATTT-ATTTT-AGC---TTGATTGCAAA-GAAAGCTC-AAAGCTTATATGAA
gi|86124 : tTTAGTTT-ATTTTAATTT-ATTTT-AGC---CCAACTGCGGA-GAAAGCTC-AGAGCTTATATGAA
gi|86130 : tTTAGTTT-ATACTGATTT-ATTTG-AGC---TGGATTGTGTA-GAAAGCTC-AGAGCTTATATGAA
gi|86333 : tTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86332 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86335 : TAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAACTC-AGAGCTTATATGAA
gi|86334 : TAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86337 : TAGTTT-ATATTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86339 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86341 : TAGTTT-ACACTAATTT-ATTTT-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86330 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86343 : TAGTTTTATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATCAA
gi|86340 : TAGTTG-ATATTAATTT-ATTTC-AGC---TCGATTGCGAA-GAAAGCTC-AGGGCTTATATGAA
gi|86113 : TAGTTT-ATACTAATTT-ATCTC-AGC---TCGATTGCGAA-GACAGCTC-AGAGATTATATGAA
gi|86342 : tcTAGTTT-ATATTAATTT-ATTTT-AGC---TTGGTTGCGAA-GAAAGCTC-AAAGTTTATATGAA
gi|86116 : TGGTTT-ATACTAATTT-ATCTA-AGC---TCGATTGCGAA-GACAGCTC-AGAGCTTATATGAA
gi|86365 : tcAGTTT-ATACTAATTT-ATTAT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCCTATATGAA
gi|86366 : AGTTT-ATACTAATTT-ATTTT-AGT---TTGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86368 : AGTTT-ATACTAATTTTCTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86128 : AGTTT-ACATTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86118 : tttaTTT-ATACTAATTT-ATTTT-AGT---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Alignments
lowQualScore : 0 0 0 000 0 0
lowQualScore : . . . ... . .
lowQualScore : 4 4 4 777 4 8
consensus : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Reference ( family-122 ) : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86073 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAA-GAAAGCTC-AGAGCTTATATGAA
gi|86078 : tTTAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86079 : tTTAGTTT-ATGCTAATTT-ATTTT-TGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86080 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAGCTTATATGAA
gi|86083 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86084 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TAGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86085 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTAATATGAA
gi|86086 : tTTATTCT-ATACTAATTT-ATTTT-AGT---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86087 : tTTAGTTT-ATACCAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86088 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTT-AGAGCTTATATGAA
gi|86090 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCTATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86091 : tTTAGTTT-ATTCTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86093 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAATACTC-AGAGCTTATATGAA
gi|86094 : tTTAGTTT-ATATTAATTT-ATTTT-AGC---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86095 : tTTAGTTT-ATACTAATTT-ATTTT-AGT---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86096 : tTTAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCTAT-GAAAGCTC-AGAGCTTATATGA
gi|86097 : tTTATTTT-ATACAAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86099 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86100 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86101 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAATCTC-AGAGCTTATATAAA
gi|86102 : tTTAGTTT-ATAGTAATTT-ATTTT-AGT---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86103 : tTTAGTT--ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86104 : tTCAGTTT-ATACTAATTT-ATTTT-AGC---TCGATAGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86105 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATA
gi|86106 : tTTAGTTT-ATACTAATTT-ATTCT-AGC---TCGATAGCGAG-GAAAGCTC-GAAGCTTATATGAA
gi|86107 : tTCAGTTT-ATACTAACTT-ATTTT-AGT---TCGATTACGAA-CAAAGCTC-AGAGCTTATATGAA
gi|86108 : tTTAGTTT-GTACTAATTT-ATTTT-AGC---TTGATTGTGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86110 : tTTAGTTT-ATACTTATTT-ATTTT-ATC---TCGATTGCGAA-GAAAGCTC-AAAGATTATATGAA
gi|86112 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTG-AGAGCTTATGAGAA
gi|86113 : tTAGTTT-ATACTAATTT-ATCTC-AGC---TCGATTGCGAA-GACAGCTC-AGAGATTATATGAA
gi|86114 : tcTTAGTTT-ATACTTATTT-ATTTT-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTAAATGAA
gi|86115 : tTTAGTTT-ATACTAATTT-AATTT-AGC---TCGTTTGCGAT-GAAAGCTC-AGAACTTATATGAA
gi|86116 : tTGGTTT-ATACTAATTT-ATCTA-AGC---TCGATTGCGAA-GACAGCTC-AGAGCTTATATGAA
gi|86117 : tcTTAGTTT-ATACTACTTT-ATTTT-AGC---TCAACTGCGAT-GAAAGCTC-AGAGCTCATATGAA
gi|86118 : tTTT-ATACTAATTT-ATTTT-AGT---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86119 : tttcaTTATTTT-ATACTAATTT-ATTTT-AGC---TTAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86120 : tTTACTTT-AAACTAATTT-ATTTT-AGC---TTGATTGCAAA-GAAAGCTC-AAAGCTTATATGAA
gi|86121 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86122 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86124 : tTTAGTTT-ATTTTAATTT-ATTTT-AGC---CCAACTGCGGA-GAAAGCTC-AGAGCTTATATGAA
gi|86125 : tTTAGTTT-ATACTTATTT-ATTTT-AGCGGCTCGATTGCGAT-GAAAGCTC-AGAGCTTATATG
gi|86127 : tTTAGTTT-ATACTAATTC-ATTTT-AGT---TTGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86128 : tAGTTT-ACATTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86130 : tttaTTAGTTT-ATACTGATTT-ATTTG-AGC---TGGATTGTGTA-GAAAGCTC-AGAGCTTATATGAA
gi|86131 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGATAT-GAAAGCTC-AGAGCTCGTATGAA
gi|86132 : tTTAGTTT-ATATTAATTT-CTTTT-AGC---TCGATTGCGGT-GAAAGCTC-AGAGCTAATATGAA
gi|86133 : tTTAATTT-CTACTAATTT-ATTTA-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86134 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---ACGATTGCGAT-GAATGCTC-GGAGCTTATATAAA
gi|86226 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86227 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86228 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86229 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86230 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86231 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86233 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86236 : TTAGTTT-ATACTAATTT-ATTTT-AGA---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86237 : TTAGTTT-ATACTAATTT-ATTTTTAGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86238 : TTAGTTT-ATACTAATTC-ATTTC-AGC---TCGATTGCGAC-GAAAGCTC-AGAGCTTATATGAA
gi|86239 : TTAGTTT-ATACCAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATGAA
gi|86240 : TTAGTTT-ATACTAATTT-GTTTT-AGC---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86241 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86242 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86243 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATTAA
gi|86245 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGGCTTATTTGAA
gi|86246 : TTAGTTT-ATACTAATCT-ATTTT-AAC---TTTATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86247 : TTAATTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAACTTATATGAA
gi|86249 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTA-AGAGCTTTTATGAA
gi|86250 : TTAGTTT-ATTCTAATAT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86251 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGAATGCAAT-AAAAGCTC-AAAGCTTATATGAA
gi|86254 : TTAGTTT-GTACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTC-AGAGATTATATGAA
gi|86256 : TTAGTTA-ATACTAATTT-ATTTT-AGC---TCAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86257 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAACTTATATGAA
gi|86259 : TTAGTTT-ATACTCATTT-ATTTT-AGT---TCGATTGCGAA-GAAAACTC-AGAGCTTATA-GAA
gi|86260 : TTAGTTT-ATACTAATTA-ATTT--AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86261 : TTAGTTT-ATACTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAATTTC-AGAGCTTATATGAA
gi|86262 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGTCTTATATGAA
gi|86263 : TTAGTTT-ATTCTAATTT-ATTTA-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86264 : TTAGTTT-ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGTGTTTATATGAA
gi|86265 : TTGGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTCATA
gi|86266 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATCGGGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86268 : TTAGTTT-ATACTAATTT-ATTTG-AGT---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86269 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATAGTGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86270 : TTAGTTT-ATACTTATTC-ATTTT-AGC---TTGATTGC-ATAGAAAGCTC-AGAGCTTATATGAA
gi|86272 : TTAGTTT-ATACTAATTT-ATATT-AGC---TTGATTGTGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86273 : TTAGTTT-ATACTAATTT-AATTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAGCGTATATGA
gi|86274 : TTAGTTT-ATACTAATTT-CTTTT-AGA---ACGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86330 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86332 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86333 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86334 : TAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86335 : TAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAACTC-AGAGCTTATATGAA
gi|86337 : TAGTTT-ATATTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86339 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86340 : TAGTTG-ATATTAATTT-ATTTC-AGC---TCGATTGCGAA-GAAAGCTC-AGGGCTTATATGAA
gi|86341 : TAGTTT-ACACTAATTT-ATTTT-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86342 : TAGTTT-ATATTAATTT-ATTTT-AGC---TTGGTTGCGAA-GAAAGCTC-AAAGTTTATATGAA
gi|86343 : TAGTTTTATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATCAA
gi|86365 : AGTTT-ATACTAATTT-ATTAT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCCTATATGAA
gi|86366 : AGTTT-ATACTAATTT-ATTTT-AGT---TTGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86368 : AGTTT-ATACTAATTTTCTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Alignments
lowQualScore : 0 0 0 000 0 0
lowQualScore : . . . ... . .
lowQualScore : 4 4 4 777 4 8
consensus : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Reference ( family-122 ) : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86073 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAA-GAAAGCTC-AGAGCTTATATGAA
gi|86078 : tTTAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86079 : tTTAGTTT-ATGCTAATTT-ATTTT-TGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86080 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAGCTTATATGAA
gi|86083 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86084 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TAGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86085 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTAATATGAA
gi|86086 : tTTATTCT-ATACTAATTT-ATTTT-AGT---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86087 : tTTAGTTT-ATACCAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86088 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTT-AGAGCTTATATGAA
gi|86090 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCTATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86091 : tTTAGTTT-ATTCTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86093 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAATACTC-AGAGCTTATATGAA
gi|86094 : tTTAGTTT-ATATTAATTT-ATTTT-AGC---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86095 : tTTAGTTT-ATACTAATTT-ATTTT-AGT---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86096 : tTTAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCTAT-GAAAGCTC-AGAGCTTATATGA
gi|86097 : tTTATTTT-ATACAAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86099 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86100 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86101 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAATCTC-AGAGCTTATATAAA
gi|86102 : tTTAGTTT-ATAGTAATTT-ATTTT-AGT---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86103 : tTTAGTT--ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86104 : tTCAGTTT-ATACTAATTT-ATTTT-AGC---TCGATAGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86105 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATA
gi|86106 : tTTAGTTT-ATACTAATTT-ATTCT-AGC---TCGATAGCGAG-GAAAGCTC-GAAGCTTATATGAA
gi|86107 : tTCAGTTT-ATACTAACTT-ATTTT-AGT---TCGATTACGAA-CAAAGCTC-AGAGCTTATATGAA
gi|86108 : tTTAGTTT-GTACTAATTT-ATTTT-AGC---TTGATTGTGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86110 : tTTAGTTT-ATACTTATTT-ATTTT-ATC---TCGATTGCGAA-GAAAGCTC-AAAGATTATATGAA
gi|86112 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTG-AGAGCTTATGAGAA
gi|86113 : tTAGTTT-ATACTAATTT-ATCTC-AGC---TCGATTGCGAA-GACAGCTC-AGAGATTATATGAA
gi|86114 : tcTTAGTTT-ATACTTATTT-ATTTT-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTAAATGAA
gi|86115 : tTTAGTTT-ATACTAATTT-AATTT-AGC---TCGTTTGCGAT-GAAAGCTC-AGAACTTATATGAA
gi|86116 : tTGGTTT-ATACTAATTT-ATCTA-AGC---TCGATTGCGAA-GACAGCTC-AGAGCTTATATGAA
gi|86117 : tcTTAGTTT-ATACTACTTT-ATTTT-AGC---TCAACTGCGAT-GAAAGCTC-AGAGCTCATATGAA
gi|86118 : tTTT-ATACTAATTT-ATTTT-AGT---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86119 : tttcaTTATTTT-ATACTAATTT-ATTTT-AGC---TTAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86120 : tTTACTTT-AAACTAATTT-ATTTT-AGC---TTGATTGCAAA-GAAAGCTC-AAAGCTTATATGAA
gi|86121 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86122 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86124 : tTTAGTTT-ATTTTAATTT-ATTTT-AGC---CCAACTGCGGA-GAAAGCTC-AGAGCTTATATGAA
gi|86125 : tTTAGTTT-ATACTTATTT-ATTTT-AGCGGCTCGATTGCGAT-GAAAGCTC-AGAGCTTATATG
gi|86127 : tTTAGTTT-ATACTAATTC-ATTTT-AGT---TTGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86128 : tAGTTT-ACATTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86130 : tttaTTAGTTT-ATACTGATTT-ATTTG-AGC---TGGATTGTGTA-GAAAGCTC-AGAGCTTATATGAA
gi|86131 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGATAT-GAAAGCTC-AGAGCTCGTATGAA
gi|86132 : tTTAGTTT-ATATTAATTT-CTTTT-AGC---TCGATTGCGGT-GAAAGCTC-AGAGCTAATATGAA
gi|86133 : tTTAATTT-CTACTAATTT-ATTTA-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86134 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---ACGATTGCGAT-GAATGCTC-GGAGCTTATATAAA
gi|86226 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86227 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86228 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86229 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86230 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86231 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86233 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86236 : TTAGTTT-ATACTAATTT-ATTTT-AGA---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86237 : TTAGTTT-ATACTAATTT-ATTTTTAGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86238 : TTAGTTT-ATACTAATTC-ATTTC-AGC---TCGATTGCGAC-GAAAGCTC-AGAGCTTATATGAA
gi|86239 : TTAGTTT-ATACCAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATGAA
gi|86240 : TTAGTTT-ATACTAATTT-GTTTT-AGC---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86241 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86242 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86243 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATTAA
gi|86245 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGGCTTATTTGAA
gi|86246 : TTAGTTT-ATACTAATCT-ATTTT-AAC---TTTATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86247 : TTAATTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAACTTATATGAA
gi|86249 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTA-AGAGCTTTTATGAA
gi|86250 : TTAGTTT-ATTCTAATAT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86251 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGAATGCAAT-AAAAGCTC-AAAGCTTATATGAA
gi|86254 : TTAGTTT-GTACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTC-AGAGATTATATGAA
gi|86256 : TTAGTTA-ATACTAATTT-ATTTT-AGC---TCAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86257 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAACTTATATGAA
gi|86259 : TTAGTTT-ATACTCATTT-ATTTT-AGT---TCGATTGCGAA-GAAAACTC-AGAGCTTATA-GAA
gi|86260 : TTAGTTT-ATACTAATTA-ATTT--AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86261 : TTAGTTT-ATACTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAATTTC-AGAGCTTATATGAA
gi|86262 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGTCTTATATGAA
gi|86263 : TTAGTTT-ATTCTAATTT-ATTTA-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86264 : TTAGTTT-ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGTGTTTATATGAA
gi|86265 : TTGGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTCATA
gi|86266 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATCGGGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86268 : TTAGTTT-ATACTAATTT-ATTTG-AGT---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86269 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATAGTGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86270 : TTAGTTT-ATACTTATTC-ATTTT-AGC---TTGATTGC-ATAGAAAGCTC-AGAGCTTATATGAA
gi|86272 : TTAGTTT-ATACTAATTT-ATATT-AGC---TTGATTGTGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86273 : TTAGTTT-ATACTAATTT-AATTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAGCGTATATGA
gi|86274 : TTAGTTT-ATACTAATTT-CTTTT-AGA---ACGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86330 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86332 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86333 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86334 : TAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86335 : TAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAACTC-AGAGCTTATATGAA
gi|86337 : TAGTTT-ATATTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86339 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86340 : TAGTTG-ATATTAATTT-ATTTC-AGC---TCGATTGCGAA-GAAAGCTC-AGGGCTTATATGAA
gi|86341 : TAGTTT-ACACTAATTT-ATTTT-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86342 : TAGTTT-ATATTAATTT-ATTTT-AGC---TTGGTTGCGAA-GAAAGCTC-AAAGTTTATATGAA
gi|86343 : TAGTTTTATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATCAA
gi|86365 : AGTTT-ATACTAATTT-ATTAT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCCTATATGAA
gi|86366 : AGTTT-ATACTAATTT-ATTTT-AGT---TTGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86368 : AGTTT-ATACTAATTTTCTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
blockSeqCons :
originalCons : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
finalCons : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Alignments
lowQualScore : 0 0 0 000 0 0
lowQualScore : . . . ... . .
lowQualScore : 4 4 4 777 4 8
consensus : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
Reference ( family-122 ) : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86073 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAA-GAAAGCTC-AGAGCTTATATGAA
gi|86078 : tTTAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86079 : tTTAGTTT-ATGCTAATTT-ATTTT-TGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86080 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAGCTTATATGAA
gi|86083 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86084 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TAGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86085 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTAATATGAA
gi|86086 : tTTATTCT-ATACTAATTT-ATTTT-AGT---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86087 : tTTAGTTT-ATACCAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86088 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTT-AGAGCTTATATGAA
gi|86090 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCTATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86091 : tTTAGTTT-ATTCTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86093 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAATACTC-AGAGCTTATATGAA
gi|86094 : tTTAGTTT-ATATTAATTT-ATTTT-AGC---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86095 : tTTAGTTT-ATACTAATTT-ATTTT-AGT---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86096 : tTTAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCTAT-GAAAGCTC-AGAGCTTATATGA
gi|86097 : tTTATTTT-ATACAAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86099 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86100 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGTGAC-AAAAGCTC-AGAGCTTATAGGAA
gi|86101 : tTTAGTTC-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAATCTC-AGAGCTTATATAAA
gi|86102 : tTTAGTTT-ATAGTAATTT-ATTTT-AGT---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86103 : tTTAGTT--ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86104 : tTCAGTTT-ATACTAATTT-ATTTT-AGC---TCGATAGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86105 : tTTAGTTG-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATA
gi|86106 : tTTAGTTT-ATACTAATTT-ATTCT-AGC---TCGATAGCGAG-GAAAGCTC-GAAGCTTATATGAA
gi|86107 : tTCAGTTT-ATACTAACTT-ATTTT-AGT---TCGATTACGAA-CAAAGCTC-AGAGCTTATATGAA
gi|86108 : tTTAGTTT-GTACTAATTT-ATTTT-AGC---TTGATTGTGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86110 : tTTAGTTT-ATACTTATTT-ATTTT-ATC---TCGATTGCGAA-GAAAGCTC-AAAGATTATATGAA
gi|86112 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTG-AGAGCTTATGAGAA
gi|86113 : tTAGTTT-ATACTAATTT-ATCTC-AGC---TCGATTGCGAA-GACAGCTC-AGAGATTATATGAA
gi|86114 : tcTTAGTTT-ATACTTATTT-ATTTT-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTAAATGAA
gi|86115 : tTTAGTTT-ATACTAATTT-AATTT-AGC---TCGTTTGCGAT-GAAAGCTC-AGAACTTATATGAA
gi|86116 : tTGGTTT-ATACTAATTT-ATCTA-AGC---TCGATTGCGAA-GACAGCTC-AGAGCTTATATGAA
gi|86117 : tcTTAGTTT-ATACTACTTT-ATTTT-AGC---TCAACTGCGAT-GAAAGCTC-AGAGCTCATATGAA
gi|86118 : tTTT-ATACTAATTT-ATTTT-AGT---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86119 : tttcaTTATTTT-ATACTAATTT-ATTTT-AGC---TTAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86120 : tTTACTTT-AAACTAATTT-ATTTT-AGC---TTGATTGCAAA-GAAAGCTC-AAAGCTTATATGAA
gi|86121 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86122 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGAGAT-GAAAGCTCAAGAGCTTATATGA
gi|86124 : tTTAGTTT-ATTTTAATTT-ATTTT-AGC---CCAACTGCGGA-GAAAGCTC-AGAGCTTATATGAA
gi|86125 : tTTAGTTT-ATACTTATTT-ATTTT-AGCGGCTCGATTGCGAT-GAAAGCTC-AGAGCTTATATG
gi|86127 : tTTAGTTT-ATACTAATTC-ATTTT-AGT---TTGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86128 : tAGTTT-ACATTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86130 : tttaTTAGTTT-ATACTGATTT-ATTTG-AGC---TGGATTGTGTA-GAAAGCTC-AGAGCTTATATGAA
gi|86131 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGATAT-GAAAGCTC-AGAGCTCGTATGAA
gi|86132 : tTTAGTTT-ATATTAATTT-CTTTT-AGC---TCGATTGCGGT-GAAAGCTC-AGAGCTAATATGAA
gi|86133 : tTTAATTT-CTACTAATTT-ATTTA-AGT---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86134 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---ACGATTGCGAT-GAATGCTC-GGAGCTTATATAAA
gi|86226 : tTTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86227 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86228 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86229 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86230 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86231 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86233 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86236 : TTAGTTT-ATACTAATTT-ATTTT-AGA---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86237 : TTAGTTT-ATACTAATTT-ATTTTTAGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86238 : TTAGTTT-ATACTAATTC-ATTTC-AGC---TCGATTGCGAC-GAAAGCTC-AGAGCTTATATGAA
gi|86239 : TTAGTTT-ATACCAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATGAA
gi|86240 : TTAGTTT-ATACTAATTT-GTTTT-AGC---TCGATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86241 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86242 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTACGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86243 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-GGAGCTTATATTAA
gi|86245 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGGCTTATTTGAA
gi|86246 : TTAGTTT-ATACTAATCT-ATTTT-AAC---TTTATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86247 : TTAATTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AAAACTTATATGAA
gi|86249 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTA-AGAGCTTTTATGAA
gi|86250 : TTAGTTT-ATTCTAATAT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86251 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCGAATGCAAT-AAAAGCTC-AAAGCTTATATGAA
gi|86254 : TTAGTTT-GTACTAATTT-ATTTT-AGC---TCGATTGCAAT-GAAAGCTC-AGAGATTATATGAA
gi|86256 : TTAGTTA-ATACTAATTT-ATTTT-AGC---TCAATTGTGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86257 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAACTTATATGAA
gi|86259 : TTAGTTT-ATACTCATTT-ATTTT-AGT---TCGATTGCGAA-GAAAACTC-AGAGCTTATA-GAA
gi|86260 : TTAGTTT-ATACTAATTA-ATTT--AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86261 : TTAGTTT-ATACTAATTT-CTTTT-AGC---TCGATTGCGAT-GAAATTTC-AGAGCTTATATGAA
gi|86262 : TTAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGGTCTTATATGAA
gi|86263 : TTAGTTT-ATTCTAATTT-ATTTA-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86264 : TTAGTTT-ATACTAATTT-ATTTA-AGC---TCGATTGCGAT-GAAAGCTC-AGTGTTTATATGAA
gi|86265 : TTGGTTT-ATACTAATTT-ATTTT-AGC---TTGATTGTGAA-GAAAGCTC-AGAGCTCATA
gi|86266 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TCAATCGGGAT-GAAAGCTC-AGAGTTTATATGAA
gi|86268 : TTAGTTT-ATACTAATTT-ATTTG-AGT---TTGATTGCAAT-GAAAGCTC-AGAGCTTATATGAA
gi|86269 : TTAGTTT-ATACTAATTT-ATTTT-AGC---TTGATAGTGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86270 : TTAGTTT-ATACTTATTC-ATTTT-AGC---TTGATTGC-ATAGAAAGCTC-AGAGCTTATATGAA
gi|86272 : TTAGTTT-ATACTAATTT-ATATT-AGC---TTGATTGTGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86273 : TTAGTTT-ATACTAATTT-AATTT-AGC---TCGATTGCGAT-AAAAGCTC-AGAGCGTATATGA
gi|86274 : TTAGTTT-ATACTAATTT-CTTTT-AGA---ACGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86330 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAA-GAAAGCTC-AGAGCTTATATGAA
gi|86332 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86333 : TAGTTT-ATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86334 : TAGTTT-ATACTAATTT-ACTTT-AGC---TCGATTGCGAT-GAAAGTTC-AGAGCTTATATGAA
gi|86335 : TAGTTT-ATACTAATTC-ATTTT-AGC---TCGATTGCGAT-GAAAACTC-AGAGCTTATATGAA
gi|86337 : TAGTTT-ATATTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86339 : TAGTTT-ATACTTATTT-ATTTT-AGC---TCGATTGCGAT-GGAAGCTC-AGAGCTTATATGAA
gi|86340 : TAGTTG-ATATTAATTT-ATTTC-AGC---TCGATTGCGAA-GAAAGCTC-AGGGCTTATATGAA
gi|86341 : TAGTTT-ACACTAATTT-ATTTT-AGC---CCGATTGCGAT-GAAAGCTC-AGAGCTTACATGAA
gi|86342 : TAGTTT-ATATTAATTT-ATTTT-AGC---TTGGTTGCGAA-GAAAGCTC-AAAGTTTATATGAA
gi|86343 : TAGTTTTATACTAATTT-ATTTT-AGC---TCAATTGCGAT-GAAAGCTC-AGAGCTTATATCAA
gi|86365 : AGTTT-ATACTAATTT-ATTAT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCCTATATGAA
gi|86366 : AGTTT-ATACTAATTT-ATTTT-AGT---TTGACTGCGAT-GAAAGCTC-AGAGCTTATATGAA
gi|86368 : AGTTT-ATACTAATTTTCTTTT-AGC---TCGATTGCGAT-GAAAGCTC-AGAGCTTATATGAA