lowQualScore : 6 0 22222 11111111 000 11111 0 6 6 1 00 0000 0
lowQualScore : . . ..... ........ ... ..... . . . . .. .... .
lowQualScore : 4 4 00000 55555555 777 00000 4 1 6 2 66 9999 4
consensus : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
Reference ( gi|80655 ) : ACATCATCATGTCA-----TG--------TT---GATCA-----ATT-GATAAACTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80653 : ACGTCATCATGTCA-----TG--------TT---GATCA-----TTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80716 : ACTTCATCATGTCA-----TC--------TT---GATCA-----ATT-GATAAACTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-AAAGTTGCA
gi|80651 : ACGTTGTCATGTCA-----TG--------TT---GGTCA-----ATT-GATAAATTGAGCCAAGGG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80759 : ACTTCGTCATGTCA-----TG--------TT---GATCA-----ATTTGATAAACAGAGCTAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80673 : ACTTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TAAGAT-AAAGTTACA
gi|80658 : ACGTCGTCATGTCA-----GG--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATT----TATGAT-AAAGTTACA
gi|80695 : ACATCGTTATGTCA-----TG--------TT---GATCT-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-ACAGTTACA
gi|80661 : ACGTCGTCATGTCA-----CG--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-ACAGTTACA
gi|80662 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCA--ATG----CATGAC-AAAGTTACA
gi|80770 : ACATCATTATGACA-----TG--------TT---AATCAAATCAATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80691 : ACTTCGTCATGTCA-----TT--------TT---GATCA-----ATT-GATAAATTGAGCCAAATGTTTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80708 : ACGTCATCATGTCA-----TG--------TT---GATCA-----TAT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGAT-AAAGTTACA
gi|80692 : ACTTCGTCATGTCA-----TG--------TT---GATAA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCGTCC--ATG----TATAAT-AAAGTTGCA
gi|80748 : ACGTCATCATGTCA-----CG--------TT---GATCA-----ATT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCCATATA----TATGAT-AAAGATACA
gi|80732 : ACGTCATGATATTA-----TA--------TT---TATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80663 : ACGTCATCTTGTCA-----TA--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAAATACA
gi|80685 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATCAT-GAAGTTA
gi|80743 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----TTT-GATAAATTGAGCTAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-TAAGTTA
gi|80796 : ACATTATAATGTCA-----TG--------TT---GATCA-----ACT--ATAAATTGAGCCAAATG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80693 : ACGTCGTTATGTCA-----TG--------TT---GATCA-----ATT-GATAACTTGAGTCATGTG-TTTTTGAGATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80753 : ACATTGTTATATCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTGTGAAATCAATCC--ATG----TATGAT-AAAGTTATA
gi|80686 : ACTTCACCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-CTTATGAAATCCATCC--ATG----TAGGAT-AAAGTAACA
gi|80766 : ACGTCATCATGTCA-----TG--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80746 : ACTTCGTCATGTCA-----TG--------TT---AATCA-----ATT-GATAAATTGAGCCAAGCGCTTTTTCAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80773 : ACTTCGTCATGTCA-----TG--------CT---GATCA-----ATT-GATAAATTGACCAAAGTG-TTTTTGAAGTCCATCT--ATG----TATGAT-AAAATTACA
gi|80728 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATAGAGCCAAATA-TTTTTGAAATCCATCC--GTG----TCTGAT-AAAATTACA
gi|80713 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGCGCCAA-TG-TTTTTGAAATCCATCA--ATT----TATGAT-AAAGTTACA
gi|80756 : ACGTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAAAAGAGCCAAGTA-TTTTTGAAATCCATCG--ATG----TCTGAT-AAAATTACA
gi|80814 : ACTTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAAATGATTGAATTC-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80835 : ACTTCATCAAGCCA-----TG--------CT---GATCA-----ATT-GATAAATTGAGCCAGGAG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTATA
gi|80799 : ACGTCATCATGTCA-----TG--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80798 : ACGTCATCATGTCA-----TG--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80784 : ACTTCGTAATGTCA-----TG--------TT---GATCA-----ACT-GATCAATTAAGCCAAGTG-TTTTTGAAATCAATCC--ATG----TATGAC-AAAGTTACA
gi|80840 : ACATCGTC-TGTCA-----TG--------CT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATTCATCC--ATA----GGTGAC-AAAGTTACA
gi|80885 : ACGTTGTCATGTCA-----TG--------TT---GATTA-----ATT-GATAA----------GTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80902 : ACGTCATCATGTCA-----TG--------TC---GATCA-----ATT-AA--------GCCAAGTG-CTTTTGAAATCCATCC--CTG----TATGAT-AAAGTTACA
gi|80896 : ACGTCATCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGTCAAATG-TTTTTGAAATCCATCC--
gi|80830 : ACGTTGTTATGTCA-----TG--------CT---TATCA-----ATT-GATCAATTCAGCCAAGTA-TTTTTGAAATCCATCT--ATA----TATGAT-AAAGTTACA
gi|80687 : ACATAGTCATGTCA-----TG--------TT---GATCA-----ATG-GATCAATTGAGCCAAGTG-TTTTTGAGAT-CATCC--ATA----TATGAC-AAAGTT
gi|80927 : ACATCGTCATGTCT-----TG--------TT---GATCA-----GTC-TATCAAATGGGCCAAATG-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTAACA
gi|80894 : ACGTTGTCATGTCA-----TG--------TT---AAACA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATCTATCC--ATG----TAAGAT-AAAGTTACA
gi|80878 : ACGTCGTCATGTCA-----TGTTGATCAATT---GATCA-----ATT-GATAAATTAAGCCAA-TG--TTTTGAAATCCATCA--ATG----TATGAT-AAAGTTA
gi|80879 : ACGTCGTCATGAAA-----TG--------TT---GATCA-----ATC-GGTCAATTGAGCCAAATG-TTTTTGAAATCCATCA--CTA----TATGAT-AAAGTTAC
gi|81346 : CGTCGTCATGTCA-----TG--------CT---GATCA-----ATT-TATCAATTGAGCTAAGTG-TCTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80666 : TCGTCACGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCATGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80682 : atgTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GAAAAATTGAGCCTAGTG-TTTTTGAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80787 : atgTCATCATGTCT-----TG--------TT---GATCA-----AAT-GATCAATTGAGCAAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTACA
gi|80762 : atgTCATCATGTCAT----TG--------TT----ATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80772 : atgTCATCATGTCA-----TG--------TT---GATGA-----ATT-GATAAATAGAGCCAAATG-TTTTTAAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|80791 : atgTCATCATGTCA-----TG--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|81397 : atgTCGTCATGTCA-----TG--------TT---GATCA-----ATT-GATGAACTGAAC-AAGTGTTTTTTTAATTCTATCC--ATG----TATGAT-AAAGTTACA
gi|81370 : TTATCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATACATCC--ATGTAACTATGAT-AAAGTTACA
gi|81427 : gCGTTATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCGAGTA-TTTTTGAAATCCATCG--ATG----TATGAT-AAAGTTACA
gi|81428 : CGTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGATA
gi|80677 : TCATGTCC-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|81463 : actttgTCATGTCA-----TG--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-CTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|81492 : gTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAAATGAGACAAGTA-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTTACA
gi|80703 : TCATCTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--TTG----TATGAT-AAAGTTACA
gi|80776 : actttgTCATGTCA-----TG--------TT---GATCA-----AAT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCC--ATG----TATGAG-AATGTTACA
gi|80779 : actttgTCATGTCA-----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAATG-TTCTTGAAATTCATCC--ATA----TATGAT-AAAGATAC
gi|80696 : atgttgTCATGTCA-----TG--------TT---GATCA-----ATT-GA--------GCCAAGTG-TTTTTGAAATCCATCC--ATG----AATGAT-AAAGTTACA
gi|81399 : acgtgtTCATGTGA-----TG--------TT---GATCA-----ATT-GATACATTGAGACAAGTG--TTTTGAAATCAATCC--ATG----TATGATAAAAGTTATA
gi|81581 : ttgCATATCAAT---TG--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81583 : CATATCAATTATTG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81607 : ATGT-A-----TG--------TTATAGATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGT
gi|81612 : TGTTA-----TG--------TT---GATCA-----ATT-AATAAAATAAGCCAAGTG-TTCTTGAAATCCATCC--ATG----TATGAT-AAAATTACA
gi|81614 : TGTCA-----TG--------CT---GATCA-----GTT-GATAAATTGAGCCAGGTG-TTTTTGAAATTCATCT--ACG----TGTGAT-AAAGTTACA
gi|81429 : GTCA-----TG--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAATTACA
gi|81622 : cgttaaA-----TG--------TT---GATCA-----ACT-GATAAATTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|81623 : A-----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81628 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81633 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGT
gi|81644 : -----TG--------TT---GATCA-----ACT-GATAAACTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81634 : -----TG--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81638 : -----TG--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81637 : -----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81636 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81635 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTA
gi|81631 : -----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81629 : -----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81640 : -----TG--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81639 : -----TA--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTACA
gi|81627 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AATGTTA
gi|81641 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTT-GAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81647 : -----TG--------TT---GATCA-----GTT-GATAAATTGAGCGAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTA
gi|81643 : -----TG--------TT---CATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81642 : -----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81645 : -----TG--------TT---GATCA-----ATT-GATGAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTA
gi|81632 : -----TG--------TT---GATCA-----ATT-GATAAATTGAAACAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81646 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATACATCC--ATG----TATGAT-AAAGTTA
gi|81648 : -----TG--------CT---GATCA-----ATT-CATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81651 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTATGAAATCCATCC--ATG----TACGAT-AAAGTTA
gi|81650 : -----TG--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTTAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81649 : -----TG--------TT---GATCA-----ATT-GATTAATTGAGTCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTA
gi|81653 : -----TG--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAAT-CATCC--ATG----TATAAT-AAAGTTA
gi|81652 : -----TG--------TT---GATTA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCTATCC--ATG----TATGAT-AAAGATA
gi|81654 : -----TG--------TT---GATCA-----ATT-GATAAATAAAGCCAAGTG-TTTTTGATATCCATCC--ATG----TATGAT-AAAGTTATA
gi|81626 : -----TG--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-A
gi|81676 : ---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCAACC--ATG----TATGAT-AAAGTTA
Alignments
lowQualScore : 11111 0 11111111 000 11111 0 1 00 0000 0
lowQualScore : ..... . ........ ... ..... . . .. .... .
lowQualScore : 66666 4 55555555 777 00000 4 2 55 9999 4
consensus : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
Reference ( family-12 ) : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80651 : ACGTTGTCATGTCA-----T-G--------TT---GGTCA-----ATT-GATAAATTGAGCCAAGGG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80653 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80655 : ACATCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAACTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80658 : ACGTCGTCATGTCA-----G-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATT----TATGAT-AAAGTTACA
gi|80661 : ACGTCGTCATGTCA-----C-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-ACAGTTACA
gi|80662 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCA--ATG----CATGAC-AAAGTTACA
gi|80663 : ACGTCATCTTGTCA-----T-A--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAAATACA
gi|80666 : ATGTCGTCACGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCATGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80673 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TAAGAT-AAAGTTACA
gi|80677 : ACTTTGTCATGTCC-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|80682 : ATGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCTAGTG-TTTTTGAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80685 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATCAT-GAAGTTA
gi|80686 : ACTTCACCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-CTTATGAAATCCATCC--ATG----TAGGAT-AAAGTAACA
gi|80687 : ACATAGTCATGTCA-----T-G--------TT---GATCA-----ATG-GATCAATTGAGCCAAGTG-TTTTTGAGAT-CATCC--ATA----TATGAC-AAAGTT
gi|80691 : ACTTCGTCATGTCA-----T-T--------TT---GATCA-----ATT-GATAAATTGAGCCAAATGTTTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80692 : ACTTCGTCATGTCA-----T-G--------TT---GATAA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCGTCC--ATG----TATAAT-AAAGTTGCA
gi|80693 : ACGTCGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAACTTGAGTCATGTG-TTTTTGAGATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80695 : ACATCGTTATGTCA-----T-G--------TT---GATCT-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-ACAGTTACA
gi|80696 : ACGTGTTCATGTCA-----T-G--------TT---GATCA-----ATT---------GAGCCAAGTG-TTTTTGAAATCCATCC--ATG----AATGAT-AAAGTTACA
gi|80703 : ACTTTGTCATCTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--TTG----TATGAT-AAAGTTACA
gi|80708 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TAT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGAT-AAAGTTACA
gi|80713 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGCGCCAA-TG-TTTTTGAAATCCATCA--ATT----TATGAT-AAAGTTACA
gi|80716 : ACTTCATCATGTCA-----T-C--------TT---GATCA-----ATT-GATAAACTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-AAAGTTGCA
gi|80728 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATAGAGCCAAATA-TTTTTGAAATCCATCC--GTG----TCTGAT-AAAATTACA
gi|80732 : ACGTCATGATATTA-----T-A--------TT---TATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80743 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCTAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-TAAGTTA
gi|80746 : ACTTCGTCATGTCA-----T-G--------TT---AATCA-----ATT-GATAAATTGAGCCAAGCGCTTTTTCAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80748 : ACGTCATCATGTCA-----C-G--------TT---GATCA-----ATT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCCATATA----TATGAT-AAAGATACA
gi|80753 : ACATTGTTATATCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTGTGAAATCAATCC--ATG----TATGAT-AAAGTTATA
gi|80756 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAAAGAGCCAAGTA-TTTTTGAAATCCATCG--ATG----TCTGAT-AAAATTACA
gi|80759 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATTTGATAAACAGAGCTAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80762 : ATGTCATCATGTCA-----TTG--------TT----ATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80766 : ACGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80770 : ACATCATTATGACA-----T-G--------TT---AATCAAATCAATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80772 : ATGTCATCATGTCA-----T-G--------TT---GATGA-----ATT-GATAAATAGAGCCAAATG-TTTTTAAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|80773 : ACTTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGACCAAAGTG-TTTTTGAAGTCCATCT--ATG----TATGAT-AAAATTACA
gi|80776 : ACTTTGTCATGTCA-----T-G--------TT---GATCA-----AAT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCC--ATG----TATGAG-AATGTTACA
gi|80779 : ATGTTGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAATG-TTCTTGAAATTCATCC--ATA----TATGAT-AAAGATAC
gi|80784 : ACTTCGTAATGTCA-----T-G--------TT---GATCA-----ACT-GATCAATTAAGCCAAGTG-TTTTTGAAATCAATCC--ATG----TATGAC-AAAGTTACA
gi|80787 : ATGTCATCATGTCT-----T-G--------TT---GATCA-----AAT-GATCAATTGAGCAAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTACA
gi|80791 : ATGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80796 : ACATTATAATGTCA-----T-G--------TT---GATCA-----ACT--ATAAATTGAGCCAAATG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80798 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80799 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80814 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGATTGAATTC-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80830 : ACGTTGTTATGTCA-----T-G--------CT---TATCA-----ATT-GATCAATTCAGCCAAGTA-TTTTTGAAATCCATCT--ATA----TATGAT-AAAGTTACA
gi|80835 : ACTTCATCAAGCCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAGGAG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTATA
gi|80840 : ACATCGTC-TGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATTCATCC--ATA----GGTGAC-AAAGTTACA
gi|80878 : ACGTCGTCATGTCA-----T-GTTGATCAATT---GATCA-----ATT-GATAAATTAAGCCAA-TG--TTTTGAAATCCATCA--ATG----TATGAT-AAAGTTA
gi|80879 : ACGTCGTCATGAAA-----T-G--------TT---GATCA-----ATC-GGTCAATTGAGCCAAATG-TTTTTGAAATCCATCA--CTA----TATGAT-AAAGTTAC
gi|80885 : ACGTTGTCATGTCA-----T-G--------TT---GATTA-----ATT-GATAA----------GTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80894 : ACGTTGTCATGTCA-----T-G--------TT---AAACA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATCTATCC--ATG----TAAGAT-AAAGTTACA
gi|80896 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGTCAAATG-TTTTTGAAATCCATCC--
gi|80902 : ACGTCATCATGTCA-----T-G--------TC---GATCA-----ATT-AA--------GCCAAGTG-CTTTTGAAATCCATCC--CTG----TATGAT-AAAGTTACA
gi|80927 : ACATCGTCATGTCT-----T-G--------TT---GATCA-----GTC-TATCAAATGGGCCAAATG-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTAACA
gi|81346 : CGTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-TATCAATTGAGCTAAGTG-TCTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|81370 : GTTATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATACATCC--ATGTAACTATGAT-AAAGTTACA
gi|81397 : TCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATGAACTGAA-CAAGTGTTTTTTTAATTCTATCC--ATG----TATGAT-AAAGTTACA
gi|81399 : TTGTCATGTGA-----T-G--------TT---GATCA-----ATT-GATACATTGAGACAAGTG--TTTTGAAATCAATCC--ATG----TATGATAAAAGTTATA
gi|81427 : CGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCGAGTA-TTTTTGAAATCCATCG--ATG----TATGAT-AAAGTTACA
gi|81428 : CGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGATA
gi|81429 : CGTTAAGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAATTACA
gi|81463 : GTCATGTCA-----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-CTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|81492 : TCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGAGACAAGTA-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTTACA
gi|81581 : CATATCAAT---T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81583 : CATATCAATTATT-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81607 : ATGT-A-----T-G--------TTATAGATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGT
gi|81612 : TGTTA-----T-G--------TT---GATCA-----ATT-AATAAAATAAGCCAAGTG-TTCTTGAAATCCATCC--ATG----TATGAT-AAAATTACA
gi|81614 : TGTCA-----T-G--------CT---GATCA-----GTT-GATAAATTGAGCCAGGTG-TTTTTGAAATTCATCT--ACG----TGTGAT-AAAGTTACA
gi|81622 : A-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|81623 : A-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81626 : -----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-A
gi|81627 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AATGTTA
gi|81628 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81629 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81631 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81632 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAAACAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81633 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGT
gi|81634 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81635 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTA
gi|81636 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81637 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81638 : -----T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81639 : -----T-A--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTACA
gi|81640 : -----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81641 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81642 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81643 : -----T-G--------TT---CATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81644 : -----T-G--------TT---GATCA-----ACT-GATAAACTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81645 : -----T-G--------TT---GATCA-----ATT-GATGAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTA
gi|81646 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATACATCC--ATG----TATGAT-AAAGTTA
gi|81647 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCGAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTA
gi|81648 : -----T-G--------CT---GATCA-----ATT-CATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81649 : -----T-G--------TT---GATCA-----ATT-GATTAATTGAGTCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTA
gi|81650 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTTAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81651 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTATGAAATCCATCC--ATG----TACGAT-AAAGTTA
gi|81652 : -----T-G--------TT---GATTA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCTATCC--ATG----TATGAT-AAAGATA
gi|81653 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAAT-CATCC--ATG----TATAAT-AAAGTTA
gi|81654 : -----T-G--------TT---GATCA-----ATT-GATAAATAAAGCCAAGTG-TTTTTGATATCCATCC--ATG----TATGAT-AAAGTTATA
gi|81676 : ---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCAACC--ATG----TATGAT-AAAGTTA
Alignments
lowQualScore : 11111 0 11111111 000 11111 0 1 00 0000 0
lowQualScore : ..... . ........ ... ..... . . .. .... .
lowQualScore : 66666 4 55555555 777 00000 4 2 55 9999 4
consensus : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
Reference ( family-12 ) : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80651 : ACGTTGTCATGTCA-----T-G--------TT---GGTCA-----ATT-GATAAATTGAGCCAAGGG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80653 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80655 : ACATCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAACTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80658 : ACGTCGTCATGTCA-----G-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATT----TATGAT-AAAGTTACA
gi|80661 : ACGTCGTCATGTCA-----C-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-ACAGTTACA
gi|80662 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCA--ATG----CATGAC-AAAGTTACA
gi|80663 : ACGTCATCTTGTCA-----T-A--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAAATACA
gi|80666 : ATGTCGTCACGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCATGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80673 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TAAGAT-AAAGTTACA
gi|80677 : ACTTTGTCATGTCC-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|80682 : ATGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCTAGTG-TTTTTGAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80685 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATCAT-GAAGTTA
gi|80686 : ACTTCACCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-CTTATGAAATCCATCC--ATG----TAGGAT-AAAGTAACA
gi|80687 : ACATAGTCATGTCA-----T-G--------TT---GATCA-----ATG-GATCAATTGAGCCAAGTG-TTTTTGAGAT-CATCC--ATA----TATGAC-AAAGTT
gi|80691 : ACTTCGTCATGTCA-----T-T--------TT---GATCA-----ATT-GATAAATTGAGCCAAATGTTTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80692 : ACTTCGTCATGTCA-----T-G--------TT---GATAA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCGTCC--ATG----TATAAT-AAAGTTGCA
gi|80693 : ACGTCGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAACTTGAGTCATGTG-TTTTTGAGATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80695 : ACATCGTTATGTCA-----T-G--------TT---GATCT-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-ACAGTTACA
gi|80696 : ACGTGTTCATGTCA-----T-G--------TT---GATCA-----ATT---------GAGCCAAGTG-TTTTTGAAATCCATCC--ATG----AATGAT-AAAGTTACA
gi|80703 : ACTTTGTCATCTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--TTG----TATGAT-AAAGTTACA
gi|80708 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TAT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGAT-AAAGTTACA
gi|80713 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGCGCCAA-TG-TTTTTGAAATCCATCA--ATT----TATGAT-AAAGTTACA
gi|80716 : ACTTCATCATGTCA-----T-C--------TT---GATCA-----ATT-GATAAACTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-AAAGTTGCA
gi|80728 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATAGAGCCAAATA-TTTTTGAAATCCATCC--GTG----TCTGAT-AAAATTACA
gi|80732 : ACGTCATGATATTA-----T-A--------TT---TATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80743 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCTAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-TAAGTTA
gi|80746 : ACTTCGTCATGTCA-----T-G--------TT---AATCA-----ATT-GATAAATTGAGCCAAGCGCTTTTTCAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80748 : ACGTCATCATGTCA-----C-G--------TT---GATCA-----ATT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCCATATA----TATGAT-AAAGATACA
gi|80753 : ACATTGTTATATCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTGTGAAATCAATCC--ATG----TATGAT-AAAGTTATA
gi|80756 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAAAGAGCCAAGTA-TTTTTGAAATCCATCG--ATG----TCTGAT-AAAATTACA
gi|80759 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATTTGATAAACAGAGCTAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80762 : ATGTCATCATGTCA-----TTG--------TT----ATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80766 : ACGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80770 : ACATCATTATGACA-----T-G--------TT---AATCAAATCAATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80772 : ATGTCATCATGTCA-----T-G--------TT---GATGA-----ATT-GATAAATAGAGCCAAATG-TTTTTAAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|80773 : ACTTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGACCAAAGTG-TTTTTGAAGTCCATCT--ATG----TATGAT-AAAATTACA
gi|80776 : ACTTTGTCATGTCA-----T-G--------TT---GATCA-----AAT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCC--ATG----TATGAG-AATGTTACA
gi|80779 : ATGTTGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAATG-TTCTTGAAATTCATCC--ATA----TATGAT-AAAGATAC
gi|80784 : ACTTCGTAATGTCA-----T-G--------TT---GATCA-----ACT-GATCAATTAAGCCAAGTG-TTTTTGAAATCAATCC--ATG----TATGAC-AAAGTTACA
gi|80787 : ATGTCATCATGTCT-----T-G--------TT---GATCA-----AAT-GATCAATTGAGCAAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTACA
gi|80791 : ATGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80796 : ACATTATAATGTCA-----T-G--------TT---GATCA-----ACT--ATAAATTGAGCCAAATG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80798 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80799 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80814 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGATTGAATTC-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80830 : ACGTTGTTATGTCA-----T-G--------CT---TATCA-----ATT-GATCAATTCAGCCAAGTA-TTTTTGAAATCCATCT--ATA----TATGAT-AAAGTTACA
gi|80835 : ACTTCATCAAGCCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAGGAG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTATA
gi|80840 : ACATCGTC-TGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATTCATCC--ATA----GGTGAC-AAAGTTACA
gi|80878 : ACGTCGTCATGTCA-----T-GTTGATCAATT---GATCA-----ATT-GATAAATTAAGCCAA-TG--TTTTGAAATCCATCA--ATG----TATGAT-AAAGTTA
gi|80879 : ACGTCGTCATGAAA-----T-G--------TT---GATCA-----ATC-GGTCAATTGAGCCAAATG-TTTTTGAAATCCATCA--CTA----TATGAT-AAAGTTAC
gi|80885 : ACGTTGTCATGTCA-----T-G--------TT---GATTA-----ATT-GATAA----------GTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80894 : ACGTTGTCATGTCA-----T-G--------TT---AAACA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATCTATCC--ATG----TAAGAT-AAAGTTACA
gi|80896 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGTCAAATG-TTTTTGAAATCCATCC--
gi|80902 : ACGTCATCATGTCA-----T-G--------TC---GATCA-----ATT-AA--------GCCAAGTG-CTTTTGAAATCCATCC--CTG----TATGAT-AAAGTTACA
gi|80927 : ACATCGTCATGTCT-----T-G--------TT---GATCA-----GTC-TATCAAATGGGCCAAATG-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTAACA
gi|81346 : CGTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-TATCAATTGAGCTAAGTG-TCTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|81370 : GTTATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATACATCC--ATGTAACTATGAT-AAAGTTACA
gi|81397 : TCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATGAACTGAA-CAAGTGTTTTTTTAATTCTATCC--ATG----TATGAT-AAAGTTACA
gi|81399 : TTGTCATGTGA-----T-G--------TT---GATCA-----ATT-GATACATTGAGACAAGTG--TTTTGAAATCAATCC--ATG----TATGATAAAAGTTATA
gi|81427 : CGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCGAGTA-TTTTTGAAATCCATCG--ATG----TATGAT-AAAGTTACA
gi|81428 : CGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGATA
gi|81429 : CGTTAAGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAATTACA
gi|81463 : GTCATGTCA-----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-CTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|81492 : TCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGAGACAAGTA-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTTACA
gi|81581 : CATATCAAT---T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81583 : CATATCAATTATT-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81607 : ATGT-A-----T-G--------TTATAGATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGT
gi|81612 : TGTTA-----T-G--------TT---GATCA-----ATT-AATAAAATAAGCCAAGTG-TTCTTGAAATCCATCC--ATG----TATGAT-AAAATTACA
gi|81614 : TGTCA-----T-G--------CT---GATCA-----GTT-GATAAATTGAGCCAGGTG-TTTTTGAAATTCATCT--ACG----TGTGAT-AAAGTTACA
gi|81622 : A-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|81623 : A-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81626 : -----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-A
gi|81627 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AATGTTA
gi|81628 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81629 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81631 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81632 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAAACAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81633 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGT
gi|81634 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81635 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTA
gi|81636 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81637 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81638 : -----T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81639 : -----T-A--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTACA
gi|81640 : -----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81641 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81642 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81643 : -----T-G--------TT---CATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81644 : -----T-G--------TT---GATCA-----ACT-GATAAACTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81645 : -----T-G--------TT---GATCA-----ATT-GATGAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTA
gi|81646 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATACATCC--ATG----TATGAT-AAAGTTA
gi|81647 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCGAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTA
gi|81648 : -----T-G--------CT---GATCA-----ATT-CATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81649 : -----T-G--------TT---GATCA-----ATT-GATTAATTGAGTCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTA
gi|81650 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTTAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81651 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTATGAAATCCATCC--ATG----TACGAT-AAAGTTA
gi|81652 : -----T-G--------TT---GATTA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCTATCC--ATG----TATGAT-AAAGATA
gi|81653 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAAT-CATCC--ATG----TATAAT-AAAGTTA
gi|81654 : -----T-G--------TT---GATCA-----ATT-GATAAATAAAGCCAAGTG-TTTTTGATATCCATCC--ATG----TATGAT-AAAGTTATA
gi|81676 : ---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCAACC--ATG----TATGAT-AAAGTTA
blockSeqs : ATTAT TTGATCAA AATCA T
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blockSeqCons :
originalCons : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
finalCons : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
Alignments
lowQualScore : 11111 0 11111111 000 11111 0 1 00 0000 0
lowQualScore : ..... . ........ ... ..... . . .. .... .
lowQualScore : 66666 4 55555555 777 00000 4 2 55 9999 4
consensus : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
Reference ( family-12 ) : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80651 : ACGTTGTCATGTCA-----T-G--------TT---GGTCA-----ATT-GATAAATTGAGCCAAGGG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80653 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80655 : ACATCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAACTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80658 : ACGTCGTCATGTCA-----G-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATT----TATGAT-AAAGTTACA
gi|80661 : ACGTCGTCATGTCA-----C-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-ACAGTTACA
gi|80662 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCA--ATG----CATGAC-AAAGTTACA
gi|80663 : ACGTCATCTTGTCA-----T-A--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAAATACA
gi|80666 : ATGTCGTCACGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCATGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80673 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TAAGAT-AAAGTTACA
gi|80677 : ACTTTGTCATGTCC-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|80682 : ATGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCTAGTG-TTTTTGAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80685 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATCAT-GAAGTTA
gi|80686 : ACTTCACCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-CTTATGAAATCCATCC--ATG----TAGGAT-AAAGTAACA
gi|80687 : ACATAGTCATGTCA-----T-G--------TT---GATCA-----ATG-GATCAATTGAGCCAAGTG-TTTTTGAGAT-CATCC--ATA----TATGAC-AAAGTT
gi|80691 : ACTTCGTCATGTCA-----T-T--------TT---GATCA-----ATT-GATAAATTGAGCCAAATGTTTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80692 : ACTTCGTCATGTCA-----T-G--------TT---GATAA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCGTCC--ATG----TATAAT-AAAGTTGCA
gi|80693 : ACGTCGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAACTTGAGTCATGTG-TTTTTGAGATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80695 : ACATCGTTATGTCA-----T-G--------TT---GATCT-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-ACAGTTACA
gi|80696 : ACGTGTTCATGTCA-----T-G--------TT---GATCA-----ATT---------GAGCCAAGTG-TTTTTGAAATCCATCC--ATG----AATGAT-AAAGTTACA
gi|80703 : ACTTTGTCATCTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--TTG----TATGAT-AAAGTTACA
gi|80708 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----TAT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGAT-AAAGTTACA
gi|80713 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGCGCCAA-TG-TTTTTGAAATCCATCA--ATT----TATGAT-AAAGTTACA
gi|80716 : ACTTCATCATGTCA-----T-C--------TT---GATCA-----ATT-GATAAACTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGGT-AAAGTTGCA
gi|80728 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATAGAGCCAAATA-TTTTTGAAATCCATCC--GTG----TCTGAT-AAAATTACA
gi|80732 : ACGTCATGATATTA-----T-A--------TT---TATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80743 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----TTT-GATAAATTGAGCTAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-TAAGTTA
gi|80746 : ACTTCGTCATGTCA-----T-G--------TT---AATCA-----ATT-GATAAATTGAGCCAAGCGCTTTTTCAAATTCATCC--ATG----TATGAT-AAAGTTACA
gi|80748 : ACGTCATCATGTCA-----C-G--------TT---GATCA-----ATT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCCATATA----TATGAT-AAAGATACA
gi|80753 : ACATTGTTATATCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTGTGAAATCAATCC--ATG----TATGAT-AAAGTTATA
gi|80756 : ACGTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAAAGAGCCAAGTA-TTTTTGAAATCCATCG--ATG----TCTGAT-AAAATTACA
gi|80759 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATTTGATAAACAGAGCTAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80762 : ATGTCATCATGTCA-----TTG--------TT----ATCA-----ATT-GATAAATTGAGACAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|80766 : ACGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80770 : ACATCATTATGACA-----T-G--------TT---AATCAAATCAATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80772 : ATGTCATCATGTCA-----T-G--------TT---GATGA-----ATT-GATAAATAGAGCCAAATG-TTTTTAAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|80773 : ACTTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGACCAAAGTG-TTTTTGAAGTCCATCT--ATG----TATGAT-AAAATTACA
gi|80776 : ACTTTGTCATGTCA-----T-G--------TT---GATCA-----AAT-GATAAATTGAGCAAAGTG-TTTTTGAAATCCATCC--ATG----TATGAG-AATGTTACA
gi|80779 : ATGTTGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAATG-TTCTTGAAATTCATCC--ATA----TATGAT-AAAGATAC
gi|80784 : ACTTCGTAATGTCA-----T-G--------TT---GATCA-----ACT-GATCAATTAAGCCAAGTG-TTTTTGAAATCAATCC--ATG----TATGAC-AAAGTTACA
gi|80787 : ATGTCATCATGTCT-----T-G--------TT---GATCA-----AAT-GATCAATTGAGCAAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTACA
gi|80791 : ATGTCATCATGTCA-----T-G--------TT---GGTCA-----ATT-GACAAATGGAGCCAAGTA-TTTTTGAAATCCATCA--ATG----TATGCT-AAAGTTACA
gi|80796 : ACATTATAATGTCA-----T-G--------TT---GATCA-----ACT--ATAAATTGAGCCAAATG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTACA
gi|80798 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80799 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTC-TTTTTGAAATCCATCC--ATG----TAT
gi|80814 : ACTTCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGATTGAATTC-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80830 : ACGTTGTTATGTCA-----T-G--------CT---TATCA-----ATT-GATCAATTCAGCCAAGTA-TTTTTGAAATCCATCT--ATA----TATGAT-AAAGTTACA
gi|80835 : ACTTCATCAAGCCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAGGAG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTATA
gi|80840 : ACATCGTC-TGTCA-----T-G--------CT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATTCATCC--ATA----GGTGAC-AAAGTTACA
gi|80878 : ACGTCGTCATGTCA-----T-GTTGATCAATT---GATCA-----ATT-GATAAATTAAGCCAA-TG--TTTTGAAATCCATCA--ATG----TATGAT-AAAGTTA
gi|80879 : ACGTCGTCATGAAA-----T-G--------TT---GATCA-----ATC-GGTCAATTGAGCCAAATG-TTTTTGAAATCCATCA--CTA----TATGAT-AAAGTTAC
gi|80885 : ACGTTGTCATGTCA-----T-G--------TT---GATTA-----ATT-GATAA----------GTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|80894 : ACGTTGTCATGTCA-----T-G--------TT---AAACA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATCTATCC--ATG----TAAGAT-AAAGTTACA
gi|80896 : ACGTCATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGTCAAATG-TTTTTGAAATCCATCC--
gi|80902 : ACGTCATCATGTCA-----T-G--------TC---GATCA-----ATT-AA--------GCCAAGTG-CTTTTGAAATCCATCC--CTG----TATGAT-AAAGTTACA
gi|80927 : ACATCGTCATGTCT-----T-G--------TT---GATCA-----GTC-TATCAAATGGGCCAAATG-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTAACA
gi|81346 : CGTCGTCATGTCA-----T-G--------CT---GATCA-----ATT-TATCAATTGAGCTAAGTG-TCTTTGAAATCCATCC--ATG----TATGAC-AAAGTTACA
gi|81370 : GTTATCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTG-----AGTG-TTTTTGAAATACATCC--ATGTAACTATGAT-AAAGTTACA
gi|81397 : TCGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATGAACTGAA-CAAGTGTTTTTTTAATTCTATCC--ATG----TATGAT-AAAGTTACA
gi|81399 : TTGTCATGTGA-----T-G--------TT---GATCA-----ATT-GATACATTGAGACAAGTG--TTTTGAAATCAATCC--ATG----TATGATAAAAGTTATA
gi|81427 : CGTTATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCGAGTA-TTTTTGAAATCCATCG--ATG----TATGAT-AAAGTTACA
gi|81428 : CGTCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGATA
gi|81429 : CGTTAAGTCA-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAATTACA
gi|81463 : GTCATGTCA-----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-CTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTACA
gi|81492 : TCATGTCA-----T-G--------TT---GATCA-----ATT-GATAAAATGAGACAAGTA-TTTTTGAAATCCATCC--ATG----TATAAT-AAAGTTACA
gi|81581 : CATATCAAT---T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81583 : CATATCAATTATT-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTATGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81607 : ATGT-A-----T-G--------TTATAGATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGT
gi|81612 : TGTTA-----T-G--------TT---GATCA-----ATT-AATAAAATAAGCCAAGTG-TTCTTGAAATCCATCC--ATG----TATGAT-AAAATTACA
gi|81614 : TGTCA-----T-G--------CT---GATCA-----GTT-GATAAATTGAGCCAGGTG-TTTTTGAAATTCATCT--ACG----TGTGAT-AAAGTTACA
gi|81622 : A-----T-G--------TT---GATCA-----ACT-GATAAATTGAGCTAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTACA
gi|81623 : A-----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81626 : -----T-G--------TT---GATCG-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-A
gi|81627 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AATGTTA
gi|81628 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81629 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81631 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81632 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAAACAAGTG-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81633 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGT
gi|81634 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81635 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTA
gi|81636 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCATCT--ATG----TATGAT-AAAGTTA
gi|81637 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81638 : -----T-G--------TT---GATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81639 : -----T-A--------TT---GATCA-----ATT-GATAAATTGAACCAAGTG-TTTTTGAAATCCATTC--ATG----TATGAT-AAAGTTACA
gi|81640 : -----T-G--------TT---GATCA-----ATT-GAAAAATTGAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81641 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG--TTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81642 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTGAAATCCATCC--ATG----CATGAT-AAAGTTATA
gi|81643 : -----T-G--------TT---CATCA-----ATT-GATAAATTAAGCCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81644 : -----T-G--------TT---GATCA-----ACT-GATAAACTGAACCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81645 : -----T-G--------TT---GATCA-----ATT-GATGAATTGAACCAAGTG-TTTTTGAAATCCATCC--ATA----TATGAT-AAAGTTA
gi|81646 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGATATACATCC--ATG----TATGAT-AAAGTTA
gi|81647 : -----T-G--------TT---GATCA-----GTT-GATAAATTGAGCGAAGTG-TTTTTGAAATCCGTCC--ATG----TATGAT-AAAGTTA
gi|81648 : -----T-G--------CT---GATCA-----ATT-CATAAATTGAGCCAAGTA-TTTTTGAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81649 : -----T-G--------TT---GATCA-----ATT-GATTAATTGAGTCAAGTG-TTTTTGAAATCCATCC--ATG----TATGAC-AAAGTTA
gi|81650 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAACCAAGTA-TTTTTTAAATCCATCC--ATG----TATGAT-AAAGTTA
gi|81651 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTA-TTTATGAAATCCATCC--ATG----TACGAT-AAAGTTA
gi|81652 : -----T-G--------TT---GATTA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCTATCC--ATG----TATGAT-AAAGATA
gi|81653 : -----T-G--------TT---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAAT-CATCC--ATG----TATAAT-AAAGTTA
gi|81654 : -----T-G--------TT---GATCA-----ATT-GATAAATAAAGCCAAGTG-TTTTTGATATCCATCC--ATG----TATGAT-AAAGTTATA
gi|81676 : ---GATCA-----ATT-GATAAATTGAGCCAAGTG-TTTTTGAAATCCAACC--ATG----TATGAT-AAAGTTA