lowQualScore : 0 0 4 0 0
lowQualScore : . . . . .
lowQualScore : 4 4 2 4 1
consensus : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
Reference ( gi|118830 ) : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118836 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118845 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCTTGAGCGGCCAACACTC-TATCCATTGCACTACC
gi|118848 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGTTGCCAACACTC-TATCCATTACACTACC
gi|118847 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATCCATTAGACTACC
gi|118846 : GGTCGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118871 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCATGATCGGCCAACACTC-TATCCATTATACTACC
gi|118851 : GGTCGAGCTGGGG-ATCGAAACCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118833 : GGCCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118856 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCATTAGACTACC
gi|118855 : GGTCGAGCTGGGA-ATCGAA-CCCATAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118860 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGACCAACACTT-TATCCATTATACTGCC
gi|118834 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTTTGGCGTGAGTGGCCAACACTT-TATCCACTACACTACC
gi|118865 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGCTGTGAGCGGCCAACACTC-TATCCATTAAACTACC
gi|118862 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACTTCTCGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118887 : GGTCAAGCTGGGG-ATCGAA-CCCACAACATCTGGCGTGAGCGACCAACACTC-TATCCATTACAATACC
gi|118894 : GGTCGATCAGGGG-ATCAAA-CTCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118873 : GGTCGAGATGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118872 : GGTCGAGATGGGG-ATCGAC-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118902 : GGTCGAGCTGGGG-ATCGAA-CCCACAACTTCTGGCGTGAGCGGCCAACACTA-TATCAATTAGACTACC
gi|118875 : GGTCGAGCTGGGA-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCAAGCACTC-TATCCATTAGACTACC
gi|118877 : GGTCGAGTTGGGG-ATCGAA-CCGGCAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118839 : GGTCGAGTTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118854 : GGTCGAACTGGGG-ATCGAA-TCCGCAACCTCTGGCGTGAGCGGTCAACACTC-TATCCATTAAACTGCC
gi|118852 : GGTCGAGCTCGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATAAGACTA
gi|118885 : GGTCGACCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATAAGACTACC
gi|118884 : GGTCGACCAGGGG-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118841 : GGCCGACCGGGAG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCACTACACTACC
gi|118844 : GGTCGAGCTGGGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAACACTC-TATCCACTAGCCTACC
gi|118866 : GGTCGAGTTGGGG-ATCAAA-CCCGCAACCTCTGGAGTGAGCGGTAAACACTC-TATCCATTACACTACC
gi|118893 : GGTCGACCGGGGG-ATCGAA-GCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACAATACC
gi|118896 : GGTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCATGAGCGGCAAACATTC-TATCCATTATACTA
gi|118880 : GGTCGAGCTTGGA-ATTGAA-CCCACAACCTTTAGCGTGAGCGGCCAACACTC-TACCCATTACACTA
gi|118832 : GGCCGAGCTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTCTACTAC
gi|118901 : GGTCGAGCTGGGG-ATTAAA-CCGGCAACGTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTAC
gi|118898 : GGTCGATCGGGGA-ATCGAA-CCCGCAACCTCTGGCGCGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118870 : GGTCGAGCTCGGG-ATCGAA-CCCGTAGCCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118857 : GGTCGAGCTTGGG-ATCGAA-CCCGTAACCTCTGGCTTGAGCGGCCAACACTC-TATCTATTAGACTACC
gi|118917 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TTTCCGTTAGATTACC
gi|118891 : GGTTGAGCAGGGG-ATCGAA-TCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCAGTACACTATC
gi|118868 : GGCCAAGTAAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCCGCCAACACTC-TATCCATTACACTACC
gi|118861 : GGTCGAACTTGGA-ATTGAA-CCCGCAACCTCTGGCGTGAACGGCCAACACTC-TATCCATTAGACTACC
gi|118843 : GGTCGATCTTGGG-ATCGAA-CCTGCAACCTCTGACGTGAGCGGTCAACACTC-TATTCATTACACTACC
gi|118863 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGTGTGAGAGGCCAACA--C-TATCCACTACACTACC
gi|118876 : GGTCGAGCTCGGG-ATCGAA-CCCACAGCCTCTTGCGTGAGCGGCCAACACTC-TTTCCACTAGACTACC
gi|118922 : GGTCGAGCTGGGG-ATAGAA-CCCGTAACCTCTGGCATGGACGGCCAACACTA-TATCCATTACACTAC
gi|118886 : GGTCGATCATGGA-ATCGAA-CCCCCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTTCACTACC
gi|118909 : GGTTGAGCTGGGG-ATTAAA-CCTGCAACCTCTGGCGTGAACGGCCAACACTC-TACCCAATACACTAC
gi|118920 : GGTCGACCGAGGG-ATTGAA-CCCGGAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118881 : GGTCGAGCCTGGG-ACTGAA-CCCACAACCTCTAGAGTGAGCAGCCAACACTC-TATCCACTACACTAC
gi|118874 : GGTCGAGCTCGGA-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCTAACACTA-TATCCA-TACACTACC
gi|118899 : GGTCAAGCTGGGG-ATTGTA-CCTGCAACCTCTGGTGTGAGCGACCAACACTC-CATCCACTACACTACC
gi|118883 : GGTCCAGCTTAGG-ATCAAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGATTACC
gi|118858 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGCACGAGAGGTCATCACTC-TATCTACTACACTACC
gi|118913 : GGTCGAGCTGGGG-ATCAAA-CCCGTAATCTCTGGCGTGAGCTGCCAACA--C-TATCCACTACACTAC
gi|118916 : GGTCGAACTGGGG-ATCGAA-CCCGCTACATCTGGCGTGAGCGGCCACCGCTC-TCTCCACTACACTACC
gi|118919 : GGTCGAGCTGGGG-ATCGGA-CCCGCTACATCTGGCGTGAGCGGCCAACACTT-TATCCACTAAAATACC
gi|118918 : GGTCGAGTTGGGG-ATCGAA-CACGCAACCTCTGGCGTGAGCCGCCAACAATA-TATTCACTACACTACC
gi|118882 : GGTTGAGCTGGGG-ATCGAA-CCCGTAACCTCTAGCATGAGCAATCAACACTC-TATCCACTGCACTAC
gi|118905 : GGTCGAGCTAGGC-ATCGAA-CCCGCAATCTCTGGCGTGAGCGTCCAACATTC-AATTCACTACACTACC
gi|118869 : GGCCGAGGTGGG--ATCAAA-CCCGCAACCTCTGGCGTGAGCGGTCAATACTC-TATCCATTAGACTAC
gi|118911 : GGTTGAATTTGGG-ATCGAA-CCCACAAGCTCTGGTGTGAGTGGCTGACACTC-TATCCACTACACTACC
gi|118903 : GGTCGAACTGTGG-ATCGAA-CTCGCAACATTTGGCGTGAGCGGTCAACACTCTTATCTACTACACTACC
gi|118888 : GGTCGAGCTTGTG-ATCGAA-CCCGTAACCTCTGGCATGAGTGACCAATACTC-AATCCACTACACTAC
gi|118892 : GGTCGAGCTTGGG-ATTGAA-CCCGCAACTTCTGGCGTGAGCGGTCAATACTC-TAGACGTTACTCTACC
gi|118910 : GGCCGAGTTTGGG-ATCGAA-CTTGCAACCTTGGACGTGAGCGGTCAACACTG-TATTCACTGCATTAC
gi|119023 : GTCGAGCTAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TTTCCATTACACTACC
gi|119024 : GTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCAGCCAACACTC-TATTCATTACACTACC
gi|119026 : GTCAAGCTGGGG-ATCGAA-CCTGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATCACACTACC
gi|119028 : GTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCGTGAGCGGCCAACAGTC-TCTCCATTAGACTACC
gi|119031 : GTCGAGCGGGGG-ATCGAA-CCCGCAGCCTCTGGCTTGAGCGGCTAACACTC-TATCTATTACACTAC
gi|119029 : GTCGAGCTTGGG-ATCGAA-CTCGCAATCTCTTACGTGAGCGGCCAACA--C-TATCCATTACACTACC
gi|119027 : GTCGAGCTTGGG-ATCGAG-CACGTAACCTCTAGTGTGAGCGGTCAACACTC-TATCAATTACACTA
gi|119032 : GTCGAGCTGGGA-TTCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAGC-TTT-TATCCACTACACTACC
gi|119030 : GCCAAGCTAGGG-ATCAAA-CGTGCAACCTTTGGTGTGAGCGGCCAACACTA-TATCCACTACACTACC
gi|119049 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAGCCAACACTC-TATCCATTAGACCACC
gi|119052 : CGAACTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCAGCCAACACTC-TATCAATCACACTACC
gi|118853 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTACATAACC
gi|119051 : gacCGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCTGCCAACACTG-TATCCATTACACTACC
gi|119050 : CGAGCTTGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAACAAACACTC-TATCAATTACACTACC
gi|119048 : CGAGCTGGGG-ATCGGA-CCCGTAACCTCTAGCGTGAACGGTCAACATTC-TATCCACTACACTACC
gi|119053 : CGAGCTGGGGGAACGAA-CCCGCAACCTATGGTGTGAGCGGCCAACACTC-TATCCACTACATTACC
gi|119056 : CGGGCTGGGG-ATCGAA-CCCGCATCCTCTGGCGTGAGTGGCTAACACTA-TATCCACTTCACTACC
gi|119057 : CGAACATGGG-ATCGAA-CTCGCAACCTTTGGCATGAGCGACCAACACTC-TATCCATAACACTACC
gi|119086 : GAGCTGGAG-ATCGAA-CCTGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCACTATACTACC
gi|119090 : GAGTTGGGA-ATCAAA-CCCGTAACCTCTGGCATGAGCAGCCAACACTT-TATCCACTACACTACC
gi|119089 : GAGCTTGAG-ATCGAA-CCCGTAACCTCTGGTGCGAGCGGCCATCACTC-TATCCATTAGACTACC
gi|119088 : GAGTTTGGG-ATCGAA-CCCTCAACCTCTGGTGTGGGCAGCCAGCACTC-TATCCAATACACTACC
gi|119136 : GGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTAC
gi|119139 : ttgGGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCGTTACACTAC
gi|119157 : ttgGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCTGCCAACACTC-TATCCATTATACTACC
gi|119150 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTAGACTACC
gi|119153 : GGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGCCAACACTC-TATTCATTACGCTACC
gi|119145 : GGG-ATAGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119156 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATTCATTACATTAC
gi|119158 : GGG-ATCGAA-GCCGCAACCTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTATC
gi|119138 : GGA-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119159 : tcGGG-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCCAACACTC-TATCCATTAGACT
gi|119152 : GGG-GTCGAA-TCCGCAACCTCTGGCGTGAGCAGCCAACACTC-CATCCACTACACTACC
gi|119154 : GGG-ATAGGA-CCCGCGACGTCTGGCGTGAGCGGTCAACACTC-TATCCACTACACTACC
Alignments
lowQualScore : 0 0 0
lowQualScore : . . .
lowQualScore : 4 4 4
consensus : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
Reference ( family-119 ) : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118830 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118832 : GGCCGAGCTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTCTACTAC
gi|118833 : GGCCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118834 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTTTGGCGTGAGTGGCCAACACTT-TATCCACTACACTACC
gi|118836 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118839 : GGTCGAGTTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118841 : GGCCGACCGGGAG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCACTACACTACC
gi|118843 : GGTCGATCTTGGG-ATCGAA-CCTGCAACCTCTGACGTGAGCGGTCAACACTC-TATTCATTACACTACC
gi|118844 : GGTCGAGCTGGGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAACACTC-TATCCACTAGCCTACC
gi|118845 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCTTGAGCGGCCAACACTC-TATCCATTGCACTACC
gi|118846 : GGTCGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118847 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATCCATTAGACTACC
gi|118848 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGTTGCCAACACTC-TATCCATTACACTACC
gi|118851 : GGTCGAGCTGGGG-ATCGAAACCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118852 : GGTCGAGCTCGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATAAGACTA
gi|118853 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTACATAACC
gi|118854 : gacGGTCGAACTGGGG-ATCGAA-TCCGCAACCTCTGGCGTGAGCGGTCAACACTC-TATCCATTAAACTGCC
gi|118855 : GGTCGAGCTGGGA-ATCGAA-CCCATAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118856 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCATTAGACTACC
gi|118857 : GGTCGAGCTTGGG-ATCGAA-CCCGTAACCTCTGGCTTGAGCGGCCAACACTC-TATCTATTAGACTACC
gi|118858 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGCACGAGAGGTCATCACTC-TATCTACTACACTACC
gi|118860 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGACCAACACTT-TATCCATTATACTGCC
gi|118861 : GGTCGAACTTGGA-ATTGAA-CCCGCAACCTCTGGCGTGAACGGCCAACACTC-TATCCATTAGACTACC
gi|118862 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACTTCTCGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118863 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGTGTGAGAGGCCAACA--C-TATCCACTACACTACC
gi|118865 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGCTGTGAGCGGCCAACACTC-TATCCATTAAACTACC
gi|118866 : GGTCGAGTTGGGG-ATCAAA-CCCGCAACCTCTGGAGTGAGCGGTAAACACTC-TATCCATTACACTACC
gi|118868 : GGCCAAGTAAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCCGCCAACACTC-TATCCATTACACTACC
gi|118869 : GGCCGAGGTGGG--ATCAAA-CCCGCAACCTCTGGCGTGAGCGGTCAATACTC-TATCCATTAGACTAC
gi|118870 : GGTCGAGCTCGGG-ATCGAA-CCCGTAGCCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118871 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCATGATCGGCCAACACTC-TATCCATTATACTACC
gi|118872 : GGTCGAGATGGGG-ATCGAC-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118873 : GGTCGAGATGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118874 : GGTCGAGCTCGGA-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCTAACACTA-TATCCA-TACACTACC
gi|118875 : GGTCGAGCTGGGA-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCAAGCACTC-TATCCATTAGACTACC
gi|118876 : GGTCGAGCTCGGG-ATCGAA-CCCACAGCCTCTTGCGTGAGCGGCCAACACTC-TTTCCACTAGACTACC
gi|118877 : GGTCGAGTTGGGG-ATCGAA-CCGGCAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118880 : GGTCGAGCTTGGA-ATTGAA-CCCACAACCTTTAGCGTGAGCGGCCAACACTC-TACCCATTACACTA
gi|118881 : GGTCGAGCCTGGG-ACTGAA-CCCACAACCTCTAGAGTGAGCAGCCAACACTC-TATCCACTACACTAC
gi|118882 : GGTTGAGCTGGGG-ATCGAA-CCCGTAACCTCTAGCATGAGCAATCAACACTC-TATCCACTGCACTAC
gi|118883 : GGTCCAGCTTAGG-ATCAAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGATTACC
gi|118884 : GGTCGACCAGGGG-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118885 : GGTCGACCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATAAGACTACC
gi|118886 : GGTCGATCATGGA-ATCGAA-CCCCCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTTCACTACC
gi|118887 : GGTCAAGCTGGGG-ATCGAA-CCCACAACATCTGGCGTGAGCGACCAACACTC-TATCCATTACAATACC
gi|118888 : GGTCGAGCTTGTG-ATCGAA-CCCGTAACCTCTGGCATGAGTGACCAATACTC-AATCCACTACACTAC
gi|118891 : GGTTGAGCAGGGG-ATCGAA-TCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCAGTACACTATC
gi|118892 : GGTCGAGCTTGGG-ATTGAA-CCCGCAACTTCTGGCGTGAGCGGTCAATACTC-TAGACGTTACTCTACC
gi|118893 : GGTCGACCGGGGG-ATCGAA-GCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACAATACC
gi|118894 : GGTCGATCAGGGG-ATCAAA-CTCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118896 : GGTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCATGAGCGGCAAACATTC-TATCCATTATACTA
gi|118898 : GGTCGATCGGGGA-ATCGAA-CCCGCAACCTCTGGCGCGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118899 : GGTCAAGCTGGGG-ATTGTA-CCTGCAACCTCTGGTGTGAGCGACCAACACTC-CATCCACTACACTACC
gi|118901 : GGTCGAGCTGGGG-ATTAAA-CCGGCAACGTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTAC
gi|118902 : GGTCGAGCTGGGG-ATCGAA-CCCACAACTTCTGGCGTGAGCGGCCAACACTA-TATCAATTAGACTACC
gi|118903 : GGTCGAACTGTGG-ATCGAA-CTCGCAACATTTGGCGTGAGCGGTCAACACTCTTATCTACTACACTACC
gi|118905 : GGTCGAGCTAGGC-ATCGAA-CCCGCAATCTCTGGCGTGAGCGTCCAACATTC-AATTCACTACACTACC
gi|118909 : GGTTGAGCTGGGG-ATTAAA-CCTGCAACCTCTGGCGTGAACGGCCAACACTC-TACCCAATACACTAC
gi|118910 : GGCCGAGTTTGGG-ATCGAA-CTTGCAACCTTGGACGTGAGCGGTCAACACTG-TATTCACTGCATTAC
gi|118911 : GGTTGAATTTGGG-ATCGAA-CCCACAAGCTCTGGTGTGAGTGGCTGACACTC-TATCCACTACACTACC
gi|118913 : GGTCGAGCTGGGG-ATCAAA-CCCGTAATCTCTGGCGTGAGCTGCCAACA--C-TATCCACTACACTAC
gi|118916 : GGTCGAACTGGGG-ATCGAA-CCCGCTACATCTGGCGTGAGCGGCCACCGCTC-TCTCCACTACACTACC
gi|118917 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TTTCCGTTAGATTACC
gi|118918 : GGTCGAGTTGGGG-ATCGAA-CACGCAACCTCTGGCGTGAGCCGCCAACAATA-TATTCACTACACTACC
gi|118919 : GGTCGAGCTGGGG-ATCGGA-CCCGCTACATCTGGCGTGAGCGGCCAACACTT-TATCCACTAAAATACC
gi|118920 : GGTCGACCGAGGG-ATTGAA-CCCGGAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118922 : GGTCGAGCTGGGG-ATAGAA-CCCGTAACCTCTGGCATGGACGGCCAACACTA-TATCCATTACACTAC
gi|119023 : GTCGAGCTAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TTTCCATTACACTACC
gi|119024 : GTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCAGCCAACACTC-TATTCATTACACTACC
gi|119026 : GTCAAGCTGGGG-ATCGAA-CCTGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATCACACTACC
gi|119027 : GTCGAGCTTGGG-ATCGAG-CACGTAACCTCTAGTGTGAGCGGTCAACACTC-TATCAATTACACTA
gi|119028 : GTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCGTGAGCGGCCAACAGTC-TCTCCATTAGACTACC
gi|119029 : GTCGAGCTTGGG-ATCGAA-CTCGCAATCTCTTACGTGAGCGGCCAACA--C-TATCCATTACACTACC
gi|119030 : GCCAAGCTAGGG-ATCAAA-CGTGCAACCTTTGGTGTGAGCGGCCAACACTA-TATCCACTACACTACC
gi|119031 : GTCGAGCGGGGG-ATCGAA-CCCGCAGCCTCTGGCTTGAGCGGCTAACACTC-TATCTATTACACTAC
gi|119032 : GTCGAGCTGGGA-TTCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAGC-TTT-TATCCACTACACTACC
gi|119048 : CGAGCTGGGG-ATCGGA-CCCGTAACCTCTAGCGTGAACGGTCAACATTC-TATCCACTACACTACC
gi|119049 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAGCCAACACTC-TATCCATTAGACCACC
gi|119050 : CGAGCTTGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAACAAACACTC-TATCAATTACACTACC
gi|119051 : CGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCTGCCAACACTG-TATCCATTACACTACC
gi|119052 : CGAACTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCAGCCAACACTC-TATCAATCACACTACC
gi|119053 : CGAGCTGGGGGAACGAA-CCCGCAACCTATGGTGTGAGCGGCCAACACTC-TATCCACTACATTACC
gi|119056 : CGGGCTGGGG-ATCGAA-CCCGCATCCTCTGGCGTGAGTGGCTAACACTA-TATCCACTTCACTACC
gi|119057 : CGAACATGGG-ATCGAA-CTCGCAACCTTTGGCATGAGCGACCAACACTC-TATCCATAACACTACC
gi|119086 : GAGCTGGAG-ATCGAA-CCTGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCACTATACTACC
gi|119088 : GAGTTTGGG-ATCGAA-CCCTCAACCTCTGGTGTGGGCAGCCAGCACTC-TATCCAATACACTACC
gi|119089 : GAGCTTGAG-ATCGAA-CCCGTAACCTCTGGTGCGAGCGGCCATCACTC-TATCCATTAGACTACC
gi|119090 : GAGTTGGGA-ATCAAA-CCCGTAACCTCTGGCATGAGCAGCCAACACTT-TATCCACTACACTACC
gi|119136 : GGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTAC
gi|119138 : ttgGGA-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119139 : tcGGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCGTTACACTAC
gi|119145 : ttgGGG-ATAGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119150 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTAGACTACC
gi|119152 : GGG-GTCGAA-TCCGCAACCTCTGGCGTGAGCAGCCAACACTC-CATCCACTACACTACC
gi|119153 : GGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGCCAACACTC-TATTCATTACGCTACC
gi|119154 : GGG-ATAGGA-CCCGCGACGTCTGGCGTGAGCGGTCAACACTC-TATCCACTACACTACC
gi|119156 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATTCATTACATTAC
gi|119157 : GGG-ATCGAA-CCCACAACCTCTGGCGTGAGCTGCCAACACTC-TATCCATTATACTACC
gi|119158 : GGG-ATCGAA-GCCGCAACCTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTATC
gi|119159 : GGG-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCCAACACTC-TATCCATTAGACT
Alignments
lowQualScore : 0 0 0
lowQualScore : . . .
lowQualScore : 4 4 4
consensus : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
Reference ( family-119 ) : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118830 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118832 : GGCCGAGCTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTCTACTAC
gi|118833 : GGCCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118834 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTTTGGCGTGAGTGGCCAACACTT-TATCCACTACACTACC
gi|118836 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118839 : GGTCGAGTTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118841 : GGCCGACCGGGAG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCACTACACTACC
gi|118843 : GGTCGATCTTGGG-ATCGAA-CCTGCAACCTCTGACGTGAGCGGTCAACACTC-TATTCATTACACTACC
gi|118844 : GGTCGAGCTGGGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAACACTC-TATCCACTAGCCTACC
gi|118845 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCTTGAGCGGCCAACACTC-TATCCATTGCACTACC
gi|118846 : GGTCGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118847 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATCCATTAGACTACC
gi|118848 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGTTGCCAACACTC-TATCCATTACACTACC
gi|118851 : GGTCGAGCTGGGG-ATCGAAACCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118852 : GGTCGAGCTCGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATAAGACTA
gi|118853 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTACATAACC
gi|118854 : gacGGTCGAACTGGGG-ATCGAA-TCCGCAACCTCTGGCGTGAGCGGTCAACACTC-TATCCATTAAACTGCC
gi|118855 : GGTCGAGCTGGGA-ATCGAA-CCCATAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118856 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCATTAGACTACC
gi|118857 : GGTCGAGCTTGGG-ATCGAA-CCCGTAACCTCTGGCTTGAGCGGCCAACACTC-TATCTATTAGACTACC
gi|118858 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGCACGAGAGGTCATCACTC-TATCTACTACACTACC
gi|118860 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGACCAACACTT-TATCCATTATACTGCC
gi|118861 : GGTCGAACTTGGA-ATTGAA-CCCGCAACCTCTGGCGTGAACGGCCAACACTC-TATCCATTAGACTACC
gi|118862 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACTTCTCGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118863 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGTGTGAGAGGCCAACA--C-TATCCACTACACTACC
gi|118865 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGCTGTGAGCGGCCAACACTC-TATCCATTAAACTACC
gi|118866 : GGTCGAGTTGGGG-ATCAAA-CCCGCAACCTCTGGAGTGAGCGGTAAACACTC-TATCCATTACACTACC
gi|118868 : GGCCAAGTAAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCCGCCAACACTC-TATCCATTACACTACC
gi|118869 : GGCCGAGGTGGG--ATCAAA-CCCGCAACCTCTGGCGTGAGCGGTCAATACTC-TATCCATTAGACTAC
gi|118870 : GGTCGAGCTCGGG-ATCGAA-CCCGTAGCCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118871 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCATGATCGGCCAACACTC-TATCCATTATACTACC
gi|118872 : GGTCGAGATGGGG-ATCGAC-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118873 : GGTCGAGATGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118874 : GGTCGAGCTCGGA-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCTAACACTA-TATCCA-TACACTACC
gi|118875 : GGTCGAGCTGGGA-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCAAGCACTC-TATCCATTAGACTACC
gi|118876 : GGTCGAGCTCGGG-ATCGAA-CCCACAGCCTCTTGCGTGAGCGGCCAACACTC-TTTCCACTAGACTACC
gi|118877 : GGTCGAGTTGGGG-ATCGAA-CCGGCAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118880 : GGTCGAGCTTGGA-ATTGAA-CCCACAACCTTTAGCGTGAGCGGCCAACACTC-TACCCATTACACTA
gi|118881 : GGTCGAGCCTGGG-ACTGAA-CCCACAACCTCTAGAGTGAGCAGCCAACACTC-TATCCACTACACTAC
gi|118882 : GGTTGAGCTGGGG-ATCGAA-CCCGTAACCTCTAGCATGAGCAATCAACACTC-TATCCACTGCACTAC
gi|118883 : GGTCCAGCTTAGG-ATCAAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGATTACC
gi|118884 : GGTCGACCAGGGG-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118885 : GGTCGACCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATAAGACTACC
gi|118886 : GGTCGATCATGGA-ATCGAA-CCCCCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTTCACTACC
gi|118887 : GGTCAAGCTGGGG-ATCGAA-CCCACAACATCTGGCGTGAGCGACCAACACTC-TATCCATTACAATACC
gi|118888 : GGTCGAGCTTGTG-ATCGAA-CCCGTAACCTCTGGCATGAGTGACCAATACTC-AATCCACTACACTAC
gi|118891 : GGTTGAGCAGGGG-ATCGAA-TCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCAGTACACTATC
gi|118892 : GGTCGAGCTTGGG-ATTGAA-CCCGCAACTTCTGGCGTGAGCGGTCAATACTC-TAGACGTTACTCTACC
gi|118893 : GGTCGACCGGGGG-ATCGAA-GCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACAATACC
gi|118894 : GGTCGATCAGGGG-ATCAAA-CTCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118896 : GGTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCATGAGCGGCAAACATTC-TATCCATTATACTA
gi|118898 : GGTCGATCGGGGA-ATCGAA-CCCGCAACCTCTGGCGCGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118899 : GGTCAAGCTGGGG-ATTGTA-CCTGCAACCTCTGGTGTGAGCGACCAACACTC-CATCCACTACACTACC
gi|118901 : GGTCGAGCTGGGG-ATTAAA-CCGGCAACGTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTAC
gi|118902 : GGTCGAGCTGGGG-ATCGAA-CCCACAACTTCTGGCGTGAGCGGCCAACACTA-TATCAATTAGACTACC
gi|118903 : GGTCGAACTGTGG-ATCGAA-CTCGCAACATTTGGCGTGAGCGGTCAACACTCTTATCTACTACACTACC
gi|118905 : GGTCGAGCTAGGC-ATCGAA-CCCGCAATCTCTGGCGTGAGCGTCCAACATTC-AATTCACTACACTACC
gi|118909 : GGTTGAGCTGGGG-ATTAAA-CCTGCAACCTCTGGCGTGAACGGCCAACACTC-TACCCAATACACTAC
gi|118910 : GGCCGAGTTTGGG-ATCGAA-CTTGCAACCTTGGACGTGAGCGGTCAACACTG-TATTCACTGCATTAC
gi|118911 : GGTTGAATTTGGG-ATCGAA-CCCACAAGCTCTGGTGTGAGTGGCTGACACTC-TATCCACTACACTACC
gi|118913 : GGTCGAGCTGGGG-ATCAAA-CCCGTAATCTCTGGCGTGAGCTGCCAACA--C-TATCCACTACACTAC
gi|118916 : GGTCGAACTGGGG-ATCGAA-CCCGCTACATCTGGCGTGAGCGGCCACCGCTC-TCTCCACTACACTACC
gi|118917 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TTTCCGTTAGATTACC
gi|118918 : GGTCGAGTTGGGG-ATCGAA-CACGCAACCTCTGGCGTGAGCCGCCAACAATA-TATTCACTACACTACC
gi|118919 : GGTCGAGCTGGGG-ATCGGA-CCCGCTACATCTGGCGTGAGCGGCCAACACTT-TATCCACTAAAATACC
gi|118920 : GGTCGACCGAGGG-ATTGAA-CCCGGAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118922 : GGTCGAGCTGGGG-ATAGAA-CCCGTAACCTCTGGCATGGACGGCCAACACTA-TATCCATTACACTAC
gi|119023 : GTCGAGCTAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TTTCCATTACACTACC
gi|119024 : GTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCAGCCAACACTC-TATTCATTACACTACC
gi|119026 : GTCAAGCTGGGG-ATCGAA-CCTGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATCACACTACC
gi|119027 : GTCGAGCTTGGG-ATCGAG-CACGTAACCTCTAGTGTGAGCGGTCAACACTC-TATCAATTACACTA
gi|119028 : GTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCGTGAGCGGCCAACAGTC-TCTCCATTAGACTACC
gi|119029 : GTCGAGCTTGGG-ATCGAA-CTCGCAATCTCTTACGTGAGCGGCCAACA--C-TATCCATTACACTACC
gi|119030 : GCCAAGCTAGGG-ATCAAA-CGTGCAACCTTTGGTGTGAGCGGCCAACACTA-TATCCACTACACTACC
gi|119031 : GTCGAGCGGGGG-ATCGAA-CCCGCAGCCTCTGGCTTGAGCGGCTAACACTC-TATCTATTACACTAC
gi|119032 : GTCGAGCTGGGA-TTCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAGC-TTT-TATCCACTACACTACC
gi|119048 : CGAGCTGGGG-ATCGGA-CCCGTAACCTCTAGCGTGAACGGTCAACATTC-TATCCACTACACTACC
gi|119049 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAGCCAACACTC-TATCCATTAGACCACC
gi|119050 : CGAGCTTGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAACAAACACTC-TATCAATTACACTACC
gi|119051 : CGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCTGCCAACACTG-TATCCATTACACTACC
gi|119052 : CGAACTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCAGCCAACACTC-TATCAATCACACTACC
gi|119053 : CGAGCTGGGGGAACGAA-CCCGCAACCTATGGTGTGAGCGGCCAACACTC-TATCCACTACATTACC
gi|119056 : CGGGCTGGGG-ATCGAA-CCCGCATCCTCTGGCGTGAGTGGCTAACACTA-TATCCACTTCACTACC
gi|119057 : CGAACATGGG-ATCGAA-CTCGCAACCTTTGGCATGAGCGACCAACACTC-TATCCATAACACTACC
gi|119086 : GAGCTGGAG-ATCGAA-CCTGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCACTATACTACC
gi|119088 : GAGTTTGGG-ATCGAA-CCCTCAACCTCTGGTGTGGGCAGCCAGCACTC-TATCCAATACACTACC
gi|119089 : GAGCTTGAG-ATCGAA-CCCGTAACCTCTGGTGCGAGCGGCCATCACTC-TATCCATTAGACTACC
gi|119090 : GAGTTGGGA-ATCAAA-CCCGTAACCTCTGGCATGAGCAGCCAACACTT-TATCCACTACACTACC
gi|119136 : GGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTAC
gi|119138 : ttgGGA-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119139 : tcGGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCGTTACACTAC
gi|119145 : ttgGGG-ATAGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119150 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTAGACTACC
gi|119152 : GGG-GTCGAA-TCCGCAACCTCTGGCGTGAGCAGCCAACACTC-CATCCACTACACTACC
gi|119153 : GGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGCCAACACTC-TATTCATTACGCTACC
gi|119154 : GGG-ATAGGA-CCCGCGACGTCTGGCGTGAGCGGTCAACACTC-TATCCACTACACTACC
gi|119156 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATTCATTACATTAC
gi|119157 : GGG-ATCGAA-CCCACAACCTCTGGCGTGAGCTGCCAACACTC-TATCCATTATACTACC
gi|119158 : GGG-ATCGAA-GCCGCAACCTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTATC
gi|119159 : GGG-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCCAACACTC-TATCCATTAGACT
blockSeqCons :
originalCons : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
finalCons : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
Alignments
lowQualScore : 0 0 0
lowQualScore : . . .
lowQualScore : 4 4 4
consensus : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
Reference ( family-119 ) : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118830 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118832 : GGCCGAGCTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTCTACTAC
gi|118833 : GGCCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118834 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTTTGGCGTGAGTGGCCAACACTT-TATCCACTACACTACC
gi|118836 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118839 : GGTCGAGTTTGGG-ATCGAA-CCCGCAACTTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118841 : GGCCGACCGGGAG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCACTACACTACC
gi|118843 : GGTCGATCTTGGG-ATCGAA-CCTGCAACCTCTGACGTGAGCGGTCAACACTC-TATTCATTACACTACC
gi|118844 : GGTCGAGCTGGGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAACACTC-TATCCACTAGCCTACC
gi|118845 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCTTGAGCGGCCAACACTC-TATCCATTGCACTACC
gi|118846 : GGTCGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118847 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATCCATTAGACTACC
gi|118848 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGTTGCCAACACTC-TATCCATTACACTACC
gi|118851 : GGTCGAGCTGGGG-ATCGAAACCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118852 : GGTCGAGCTCGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATAAGACTA
gi|118853 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTACATAACC
gi|118854 : gacGGTCGAACTGGGG-ATCGAA-TCCGCAACCTCTGGCGTGAGCGGTCAACACTC-TATCCATTAAACTGCC
gi|118855 : GGTCGAGCTGGGA-ATCGAA-CCCATAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118856 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCATTAGACTACC
gi|118857 : GGTCGAGCTTGGG-ATCGAA-CCCGTAACCTCTGGCTTGAGCGGCCAACACTC-TATCTATTAGACTACC
gi|118858 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGCACGAGAGGTCATCACTC-TATCTACTACACTACC
gi|118860 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGACCAACACTT-TATCCATTATACTGCC
gi|118861 : GGTCGAACTTGGA-ATTGAA-CCCGCAACCTCTGGCGTGAACGGCCAACACTC-TATCCATTAGACTACC
gi|118862 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACTTCTCGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118863 : GGTCGAGCTTGGG-ATCGAA-CCCACAACCTCTGGTGTGAGAGGCCAACA--C-TATCCACTACACTACC
gi|118865 : GGTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGCTGTGAGCGGCCAACACTC-TATCCATTAAACTACC
gi|118866 : GGTCGAGTTGGGG-ATCAAA-CCCGCAACCTCTGGAGTGAGCGGTAAACACTC-TATCCATTACACTACC
gi|118868 : GGCCAAGTAAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCCGCCAACACTC-TATCCATTACACTACC
gi|118869 : GGCCGAGGTGGG--ATCAAA-CCCGCAACCTCTGGCGTGAGCGGTCAATACTC-TATCCATTAGACTAC
gi|118870 : GGTCGAGCTCGGG-ATCGAA-CCCGTAGCCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118871 : GGTCGAGCTGGGG-ATCGAA-CCCACAACCTCTGGCATGATCGGCCAACACTC-TATCCATTATACTACC
gi|118872 : GGTCGAGATGGGG-ATCGAC-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118873 : GGTCGAGATGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACCCTC-TATCCATTAGACTACC
gi|118874 : GGTCGAGCTCGGA-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCTAACACTA-TATCCA-TACACTACC
gi|118875 : GGTCGAGCTGGGA-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCAAGCACTC-TATCCATTAGACTACC
gi|118876 : GGTCGAGCTCGGG-ATCGAA-CCCACAGCCTCTTGCGTGAGCGGCCAACACTC-TTTCCACTAGACTACC
gi|118877 : GGTCGAGTTGGGG-ATCGAA-CCGGCAACCTCTGGCGTGAGCGGCCAACACTT-TATCCATTAGACTACC
gi|118880 : GGTCGAGCTTGGA-ATTGAA-CCCACAACCTTTAGCGTGAGCGGCCAACACTC-TACCCATTACACTA
gi|118881 : GGTCGAGCCTGGG-ACTGAA-CCCACAACCTCTAGAGTGAGCAGCCAACACTC-TATCCACTACACTAC
gi|118882 : GGTTGAGCTGGGG-ATCGAA-CCCGTAACCTCTAGCATGAGCAATCAACACTC-TATCCACTGCACTAC
gi|118883 : GGTCCAGCTTAGG-ATCAAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTAGATTACC
gi|118884 : GGTCGACCAGGGG-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118885 : GGTCGACCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATAAGACTACC
gi|118886 : GGTCGATCATGGA-ATCGAA-CCCCCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTTCACTACC
gi|118887 : GGTCAAGCTGGGG-ATCGAA-CCCACAACATCTGGCGTGAGCGACCAACACTC-TATCCATTACAATACC
gi|118888 : GGTCGAGCTTGTG-ATCGAA-CCCGTAACCTCTGGCATGAGTGACCAATACTC-AATCCACTACACTAC
gi|118891 : GGTTGAGCAGGGG-ATCGAA-TCCGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCAGTACACTATC
gi|118892 : GGTCGAGCTTGGG-ATTGAA-CCCGCAACTTCTGGCGTGAGCGGTCAATACTC-TAGACGTTACTCTACC
gi|118893 : GGTCGACCGGGGG-ATCGAA-GCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACAATACC
gi|118894 : GGTCGATCAGGGG-ATCAAA-CTCACAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTACACTACC
gi|118896 : GGTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCATGAGCGGCAAACATTC-TATCCATTATACTA
gi|118898 : GGTCGATCGGGGA-ATCGAA-CCCGCAACCTCTGGCGCGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118899 : GGTCAAGCTGGGG-ATTGTA-CCTGCAACCTCTGGTGTGAGCGACCAACACTC-CATCCACTACACTACC
gi|118901 : GGTCGAGCTGGGG-ATTAAA-CCGGCAACGTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTAC
gi|118902 : GGTCGAGCTGGGG-ATCGAA-CCCACAACTTCTGGCGTGAGCGGCCAACACTA-TATCAATTAGACTACC
gi|118903 : GGTCGAACTGTGG-ATCGAA-CTCGCAACATTTGGCGTGAGCGGTCAACACTCTTATCTACTACACTACC
gi|118905 : GGTCGAGCTAGGC-ATCGAA-CCCGCAATCTCTGGCGTGAGCGTCCAACATTC-AATTCACTACACTACC
gi|118909 : GGTTGAGCTGGGG-ATTAAA-CCTGCAACCTCTGGCGTGAACGGCCAACACTC-TACCCAATACACTAC
gi|118910 : GGCCGAGTTTGGG-ATCGAA-CTTGCAACCTTGGACGTGAGCGGTCAACACTG-TATTCACTGCATTAC
gi|118911 : GGTTGAATTTGGG-ATCGAA-CCCACAAGCTCTGGTGTGAGTGGCTGACACTC-TATCCACTACACTACC
gi|118913 : GGTCGAGCTGGGG-ATCAAA-CCCGTAATCTCTGGCGTGAGCTGCCAACA--C-TATCCACTACACTAC
gi|118916 : GGTCGAACTGGGG-ATCGAA-CCCGCTACATCTGGCGTGAGCGGCCACCGCTC-TCTCCACTACACTACC
gi|118917 : GGTCAAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TTTCCGTTAGATTACC
gi|118918 : GGTCGAGTTGGGG-ATCGAA-CACGCAACCTCTGGCGTGAGCCGCCAACAATA-TATTCACTACACTACC
gi|118919 : GGTCGAGCTGGGG-ATCGGA-CCCGCTACATCTGGCGTGAGCGGCCAACACTT-TATCCACTAAAATACC
gi|118920 : GGTCGACCGAGGG-ATTGAA-CCCGGAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|118922 : GGTCGAGCTGGGG-ATAGAA-CCCGTAACCTCTGGCATGGACGGCCAACACTA-TATCCATTACACTAC
gi|119023 : GTCGAGCTAGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TTTCCATTACACTACC
gi|119024 : GTCGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGTGTGAGCAGCCAACACTC-TATTCATTACACTACC
gi|119026 : GTCAAGCTGGGG-ATCGAA-CCTGCAACCTCTGGTGTGAGCGGCCAACACTC-TATCCATCACACTACC
gi|119027 : GTCGAGCTTGGG-ATCGAG-CACGTAACCTCTAGTGTGAGCGGTCAACACTC-TATCAATTACACTA
gi|119028 : GTCGAGCTGGGG-ATCGAA-CTCGCAACCTCTGGCGTGAGCGGCCAACAGTC-TCTCCATTAGACTACC
gi|119029 : GTCGAGCTTGGG-ATCGAA-CTCGCAATCTCTTACGTGAGCGGCCAACA--C-TATCCATTACACTACC
gi|119030 : GCCAAGCTAGGG-ATCAAA-CGTGCAACCTTTGGTGTGAGCGGCCAACACTA-TATCCACTACACTACC
gi|119031 : GTCGAGCGGGGG-ATCGAA-CCCGCAGCCTCTGGCTTGAGCGGCTAACACTC-TATCTATTACACTAC
gi|119032 : GTCGAGCTGGGA-TTCGAA-CCCGTAACCTCTGGCGTGAGCGGTCAGC-TTT-TATCCACTACACTACC
gi|119048 : CGAGCTGGGG-ATCGGA-CCCGTAACCTCTAGCGTGAACGGTCAACATTC-TATCCACTACACTACC
gi|119049 : CGAGCTGGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAGCCAACACTC-TATCCATTAGACCACC
gi|119050 : CGAGCTTGGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCAACAAACACTC-TATCAATTACACTACC
gi|119051 : CGAGCTGGGG-ATTGAA-CCCGCAACCTCTGGCGTGAGCTGCCAACACTG-TATCCATTACACTACC
gi|119052 : CGAACTGGGG-ATCGAA-CCCACAACCTCTGGCGTGAGCAGCCAACACTC-TATCAATCACACTACC
gi|119053 : CGAGCTGGGGGAACGAA-CCCGCAACCTATGGTGTGAGCGGCCAACACTC-TATCCACTACATTACC
gi|119056 : CGGGCTGGGG-ATCGAA-CCCGCATCCTCTGGCGTGAGTGGCTAACACTA-TATCCACTTCACTACC
gi|119057 : CGAACATGGG-ATCGAA-CTCGCAACCTTTGGCATGAGCGACCAACACTC-TATCCATAACACTACC
gi|119086 : GAGCTGGAG-ATCGAA-CCTGCAACCTCTGGCATGAGCAGCCAACACTC-TATCCACTATACTACC
gi|119088 : GAGTTTGGG-ATCGAA-CCCTCAACCTCTGGTGTGGGCAGCCAGCACTC-TATCCAATACACTACC
gi|119089 : GAGCTTGAG-ATCGAA-CCCGTAACCTCTGGTGCGAGCGGCCATCACTC-TATCCATTAGACTACC
gi|119090 : GAGTTGGGA-ATCAAA-CCCGTAACCTCTGGCATGAGCAGCCAACACTT-TATCCACTACACTACC
gi|119136 : GGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCATTACACTAC
gi|119138 : ttgGGA-ATCGAA-CCTGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119139 : tcGGGA-ATTGAA-CCCGCAACCTCTGGCATGAGCGGCCAACACTC-TATCCGTTACACTAC
gi|119145 : ttgGGG-ATAGAA-CCCGCAACCTCTGGCGTGAGCGGCCAACACTC-TATCCATTAGACTACC
gi|119150 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAGCACTC-TATCCATTAGACTACC
gi|119152 : GGG-GTCGAA-TCCGCAACCTCTGGCGTGAGCAGCCAACACTC-CATCCACTACACTACC
gi|119153 : GGG-ATCGAA-CCCGTAACCTCTGGCGTGAGCGGCCAACACTC-TATTCATTACGCTACC
gi|119154 : GGG-ATAGGA-CCCGCGACGTCTGGCGTGAGCGGTCAACACTC-TATCCACTACACTACC
gi|119156 : GGG-ATCGAA-CCCGCAACCTCTGGCGTGAGCGGCCAATACTC-TATTCATTACATTAC
gi|119157 : GGG-ATCGAA-CCCACAACCTCTGGCGTGAGCTGCCAACACTC-TATCCATTATACTACC
gi|119158 : GGG-ATCGAA-GCCGCAACCTCTGGCGTGAGTGGCCAACACTC-TATCCATTACACTATC
gi|119159 : GGG-ATCGAA-CCCGCAACCTTTGGCGTGAGCGGCCAACACTC-TATCCATTAGACT