lowQualScore : 111111111111111111111111111111111111111111111111111111111111 111111111111111111111 11111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111 2222222222222222222222222222222222222222222
lowQualScore : 11 1 1 22222 11 555555555555555555555555555555555555555555555555555555555555 11 222222 1111 1 222 7777777777777 2222222 22 1111 111 11111 1 1111111111 222 111 1 11 5555 11 222222222 1 2 88888888888888888888888888888888888888888888888888888888888888 11 1 11 1 1111 1 3333333 111 2222222222222222222 111 77777777777777777777777777777777777777777777777777777777777777 111111 111 111 333333333333333333333 00000000000000000000000000000000000000000000000000 22 5555 55555555555555555 33 22 2 4 3 4 11111 3333 1 88888888888888888888888888888888888888888888888888888888888888 1 5555555555555 3 1 55 2 77777777777777777777777777777777777777777777 1 444444444444444444444444 7777777777777777777777777777777777777777777 11 11111 333333 22222222 33333333333333333333 111
lowQualScore : 33 8 4 1 1 4 77 00000 1 33 333333333333333333333333333333333333333333333333333333333333 7 4 1 4 00 4 4 555555 4 8888 2 4 3 4 6 555 9999999999999 8888 6666666 55 3 1111 4 55 666 66666 4 1 4 6 6 55 2 4 4 1 1 4 4 4444444444 666 000 6 3 6 55 5555 1 5 66 5 4 5 5 11 66 555555555 5 5 0 4 5 77777777777777777777777777777777777777777777777777777777777777 99 5 5 0 3 3 5 5 0 6 33 0 99 4444 4 7 6 0 8 8 5 77 5 0000000 444 4444444444444444444 8 888 5 4 0 5 3 6 000 4 77 99999999999999999999999999999999999999999999999999999999999999 5 5 999999 1 2 7 222 1 8 000 88 888888888888888888888 5 5 5 33333333333333333333333333333333333333333333333333 99 6 0000 3 6 77777777777777777 7 88 55 6 6 3 9 0 1 3 4 0 99999 8888 6 3 55555555555555555555555555555555555555555555555555555555555555 0 1 5 1111111111111 0 0 55 3 1 6 55555555555555555555555555555555555555555555 0 111111111111111111111111 5 0 3333333333333333333333333333333333333333333 88 7 44444 555555 5 5 5 0 5 99999999 8 5 4 11111111111111111111 444 4 4 8 66
lowQualScore : .. . . . . . .. ..... . .. ............................................................ . . . . .. . . ...... . .... . . . . . ... ............. .... ....... .. . .... . .. ... ..... . . . . . .. . . . . . . . .......... ... ... . . . .. .... . . .. . . . . .. .. ......... . . . . . .............................................................. .. . . . . . . . . . .. . .. .... . . . . . . . .. . ....... ... ................... . ... . . . . . . ... . .. .............................................................. . . ...... . . . ... . . ... .. ..................... . . . .................................................. .. . .... . . ................. . .. .. . . . . . . . . . ..... .... . . .............................................................. . . . ............. . . .. . . . ............................................ . ........................ . . ........................................... .. . ..... ...... . . . . . ........ . . . .................... ... . . . ..
lowQualScore : 66 6 2 9 1 4 99 00000 3 99 333333333333333333333333333333333333333333333333333333333333 0 4 9 4 88 4 4 666666 4 8888 4 6 7 4 0 111 7777777777777 9999 9999999 00 4 4444 4 66 777 44444 4 1 4 0 0 66 1 4 7 0 9 4 4 5555555555 000 000 7 3 0 88 7777 7 7 99 0 1 0 0 99 99 666666666 0 0 0 4 0 00000000000000000000000000000000000000000000000000000000000000 55 9 0 2 2 9 7 7 6 0 00 3 66 7777 9 3 0 7 6 9 7 44 0 6666666 000 5555555555555555555 9 666 7 7 7 7 0 7 000 9 99 99999999999999999999999999999999999999999999999999999999999999 7 7 666666 7 7 1 666 7 9 000 77 111111111111111111111 7 0 1 55555555555555555555555555555555555555555555555555 22 7 5555 5 7 99999999999999999 3 33 33 7 7 7 3 0 3 9 3 0 33333 3333 7 3 22222222222222222222222222222222222222222222222222222222222222 1 6 7 3333333333333 0 0 00 9 1 5 99999999999999999999999999999999999999999999 0 444444444444444444444444 0 4 7777777777777777777777777777777777777777777 00 1 33333 333333 0 0 0 2 0 00000000 4 0 0 11111111111111111111 000 0 0 9 11
consensus : ATAAGGGTGA--TGTTTTT-AACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-----TTTTTCATGGTTAGT---C---GTGAACACGT------T-----T--T---G-------A--AGTG-------TTCGTACGCAC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAAGG--TTTGTTTGGACACTA-TTCGTTAA-GGAA---A---N----AGCAC-T--TTAGTTTTGACAAAATTTAC--CCTT-CTGTCATGCCACGACT--CAGC-GAAAA-CCAACGT---AATC----GTG-CTGTTGGGAT-GCTTCAAGCTGGAAT-GGCACAANAT-ATCGTAGCAAGACAC-TTTGG-AGTTCA-----TC--AGAAN--AC---CATCC-AGTC-ATTACGGAGACGTTTCC-AACAAT----CTGGTAACACT-CGG--GATCGA-CCACGTTCT-GGGCGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-AC-AACCACATTA-GACTTGTGC-ACC------TGAGAAAT---C-GTTT--------------------CC-----------------AGACAGCNAGTTTGACTGC-TCGTAGCATTCCTGG-A-CTTCGACCAATCAGTCCAAGAACTGCGCGTAATC-GTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TAC-------TGCTTCA-A-CGTCATCGT-A------T----CG-CTAGACTAG-CGTGG-T-GCAGAC-GACATCNGCGATTCA-GAATACAGGA---CTGGGCCGATAT--TC--N-GTTC-ACT----------GA----------T---------TT----C---ATT-TGG-AT-AGCAG-TGAC-G--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGCAACGTC-GACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGG--TGG-AA-TAA-CAGC-CAC-TGAA-GAG--CCCTCTACAAATTGTCA-A-TGGAAATC----TCACCGGCGT-ACGCTA-TCG----GAGA-CGAAATTA--TTCA-GCGC-CATGTG-TATACCCTT-CATACAGAGACGGCAAAATCACATCAC-TCTGCAGCAAGACA-ACGCAAGGCCACAT-GTTG-CACGT-GT---------AGTCAGGG-CTTT--TTTG---TTCAACAGAAT--------GTCCG----ATGTCTTGCCTTGGCC-AGCT-GTTTCCCC-CGATTTATCGCC-GATCGAGC--ACGTCTGGGATGGAAATGGAC---ACG--N---CGTCTACGCCGTTT-AC-CAAATCAG----CC-AGTGACATT--GGCTGATTT--AGGCCA-GGCTTTAA-CCAACATC---TG-G-ACAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT-----TAGTG----G-CAT-C-AATGAGGCGCCGTTGTC-AAGCATGC--GTG--AATGCA-AATGGTGGTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
Reference ( gi|1 ) : ATAAAGGTGA--TGTTTTTGAACAACATCGAATAGTACCCGA-CTCAGATGCACG--GAC-----TTTTTTATGGTTAGTCAACTTGGTGAACACAT------T-----T--T---G-------A--AGTGCA--TA-TTCGTATGCAC-GAGTTTTA-CTGGCCAATATTGTTTGGA-GTA-AGAA------GTG-TAAAAGG--TATGTTTGGACACAA-TTCATTTG-GGA--------T----AGCAC-T--TTAGTTTTGACAAAAGTTGT--CCTT-ATGTCATGCCACGACT--CGGC-GAAAA-CCAACGT---AATC----TTG-CTGTTGGGAT-GCCTCAGGCTGGAAT-GGCACAAAAT-ATCGTTGCAAGACAC-TTTGG-AGTTCA-----TT--GGAAG--AC---CATCC-AGTC-ATTGTGGAGACGTTTCT-AACAATCAG-CTGGTAACACT-CGG--GATCGA-CCACGTTTT-GGGCGTCCTCG-TGTGA--CGT--CGCGTCG------AAAGG-AC-AACCACATTA-GACGTGTGC-ACCTGCA--TGAGAAAT---C-TTTT--------------------CC-----------------AGACAGTCAGTTTAACTGC-TCGTAGCATTCTTGG-A-CTTCGACCAATCAGTCCAAGGACTGTGTGTAATT-GTCTGCGTAAGCACAACGTTAGACCACGACGTCCAGCGGTGCG-C-TCAA-TAC-------TGCTTCA-G-CGTCATCGT-A------T----TG-TTGGACTAG-CGTGG-T-GCAGAC-GACATCTGCGATTCA-GAATACAGAA---CTGGACCAATAT--TC--A-GTTC-ATT----------GA----------T---------TT----C---ATT-T-C-AT-AGCAG-TGAC-A--GCCGTTGTAGAGTGTATCGTCGCCTTGGGGAGCGATAC---CAG-GACGCTTTTGTTAAATTGTACATGTGCAACGTC-AACAATTCGGTGGAGGTAGCG-TTACGG-GTGAGC--TGG-AA-T-A-CAGC-CAC-TGAATGAGA-CCTTCTACAAATTGTC--A-TGGAAATCTA--TCATCGGCGT-AC-CTC-TCG----GAGA-CGAAATTAC-TTCA-TCGC-CATGTGATATACCCTTACATACAGAAAC-GCAAAATCAC-TCAC-TCTGCAGCAAGACA-A-ACAAGGCCACAT-GTTG-CACGTCGT---------A--------TTTTAATTTGT--TTCAACAGAA---------GTCCG----ATGTCTTGCATTGGCC-AGCC-CCCCCCCCTCCATTTATCG-C-GATCGAGCTGACGTTTGGGATAAAAATGGA----AAG--T---C--CTACGCCGTTTAAC-CAAA-CAG---AAC-AGTGACATT--GCTTGATTT--AGA-CA-GGC-TTAA-CCAACA-C---TG-G-ACAACGTNNNNNNNNNNNNNNNNNNNNNNNNNCAAG-CATTTTTGAACACTT-----TAGAT----G-CAT-C-AATGAGGCGCCGTTGTC-AAGCATGT--ACG--AATACA-AATGGCGGTCACAC--------------G-CGTAATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|5 : ATAAAGACGA--TGTTTTTGAACAATATCGGATAGTACCCGA-CTCTGATGCACGCGGAC-----GTTTTCTTGGTTAGT---------GAACACGT------TGTTTAT--T---G-------A--AGAG-------TTCGTACACAT-GAGTTTTA-CTGGCCAATACTGTTTGTA-GTA-GGAA------GTA-TAAAATG--TTTGTTTGGACACTA-TTCGTTAC-GGA--------A----AGCAC-A--TTAGTTTTGACACAAGTTAC--CCTT-CTGCCATGCCACGACT--CAAC-GAAAA-GCAATGT---AATC----GTG-CTGTTGGGAT-GCTTCAAGTTGGAAT-GACACAAATT-A-----GCAAATCAC-TTTTG-AGTTCA-----TT--AGAAT--AT---CATCC-GGTC-ATTATGGAGACGTTTCC-AACAAC----CTGGTAACACT-CGG--GATCGA-CCATGTTCT-GGGCGTCCTCG-TGTGA--CGT--CGCGTCG------GCAGG-AC-ATCCACAATA-GACTTGTGC-ACC------TGAGAAAT---C-GTTT--------------------C-------------------------CAGTTTGACTGC-TCGTAGC-TTCCTGG-A-CTTCTACCTATCAGTCCGAGAACTGCAAGTAATC-GTCTGAGCGAGCACA---TCTGACCAAACCGTCCTGCGGTGCG-C-CCAA-TAC-------TGCTTCA-A-TGTCATCGT-A------T----CG-CAAGACTAA-CGTGG-T-GTAGAC-AAC-------ATTCA-GAATACAGTA---CTGGACCAATAT--TT--T-GTTC-ACT----------GA----------TGAA------TC----C---ATT-TGG-AT-AGCAG-TGACGA--G----TGTAGAGTGTATCGTCGCGTTGGGGAACGGTAC---CAG-GATGCTTGTGT-----------TGTGCAACTTT-GACAGTTTGGTGGAGGTAGCG-TTAT-G-GTGGGG--TGG-AATT-A-CAG--CACGTGGA-AAGACCCCTCTACAAATTATCA-A-TGGAAATC----TCACCCGCGT-ACGCTA-TC-----GAGA-TGAAATTA--TTCA-GTGT-CATGTG--ATACTCTT-CATACAAAAACAGCAATAGCACATCA
gi|10 : tgaaacaagtagttagaaatagaatatatactagcggaaaaagaaactgtgcattatgaaatttagtataatttttctatatctattgtttatatttataaaatctaaacaattgATAAAGGTGG--TGTTTTTTAACA-TATCGGATAGTTCCCGA-CTCAAATGTGCA--GACACATGTTGTTTAT
gi|15 : atattccataccctctaaacaatagATAAGGGTGA--TGTTTTT-AACTATATCGGATATTACCAGA-CTCAGATGCACG--GGC-----TTGTTC----TTA-----CTTTGTGAACACAT------T-----T--T---GTTTGTTGA--ACTG-------TTTGTACGCAC-GAGCTTTA-CTGGCCAATACTGTTTTGA-GTA-AGAA------GTG-TAAAAGG--TTTGTTTGAACATCA-TTCGTTAA-GAA--------C----AGCAC-T--TTAATTTTGACAACATTTAC--CCTT------------TGACT--AAGC-AAAAA-CTATCGT---AATC----TTT-CTGTTTGGAT-GTTTCAATCTGGAAT-GGCACAAAAT-ATCCTTGCAAGACAC-TTTGG-AGTTCA-----taatgtgttcgtacgcacgagtgttactggccaatactgtttggcgtaaaacttgtaaaagacactattcgttaaggaagacacttcagcgtatacaaaatgtaccctcctgtcatgtcatggttaagagaaaaccaaagtaattgtgctgttgagattctttaagttggaatggcacaaacgatagtaacaaggcactttggagtccatcgaaacaccatctagtcattatggagacgtttacaacaatctggcaacactcaggatcaacaacattctgggtgtcctcgtgtgacgccgagtcgacatgacagccacattagacttttgcacctgagaaatcgtttccagaagacagtttgtagtattttggagttcgaccaattagtccaaaaacagtgcgtaatcgtctgtgcgagcacaacatcagacgaagacgtccagcggtgcgtccaacactgcttcg
gi|14 : tatactaacgaaaaaaagaaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaatcgATAAGGGTGA--TGTTTTT-AACTATATCGA-TATTACCAGA-CTCAGATGCACG--GGC-----TTGTTC----TTA-----CTTTGTGAACACAT------T-----T--T---GTTTGTTGA--ACTG-------TTTGTACGCAC-GAGCTTTAACTGGCCAATACTGTTTG-A-GTACAGAA------GTG-TAAA-GG--TTTGTTTGAACATCA-TTCGTTAA-GAA--------C----AGCAC-T--TTAATTTTGACAACATTTAC--CCTT------------TGACT--AAGC-AAAAA-CTATCGT---AATC----TTT-CTGTTTGGATGGTTTCAATCTGGAAT-GGCACAAAAT-ATCCTTGCAAGA-AC-TTTGG-AGTTCACCAATTT--AGAAA--AC---cc
gi|24 : gtatactaacgaaaaaaagaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaaatcgATAAGGGTGA--TGTTTCTGAATAACATTTGATAGTACCCGA-CCGAGATGTACG--GACA----TTTTTGATGGTTA---------GTGAACACA----------------T---G-------A--AGTGagcca
gi|22 : aaactttttttgtccagtatatatacaaaatataaacattcgATAAAGGTGCT-TGTTTTT-AACAATATCG-ATAGTATCCGATCTCAGATt
gi|23 : aagaaaatattctaagtataactggcggaaaaagaaactgctgcattagaaatttagtatatttttccccttaatttattgtttatatttatagactattgtttatatttataatcttaacaatcgAAGGTGACTTGTTTT--AACAATATCG-ATAGTATCCGA-TT
gi|8 : ataactggcggaaaaaagaaacttgctgcatagaaatttagtataatttccccttaatttattgtttatatttatagactattgttatttatttaataatcataaacaatcgatAATATCGGATAGTACCCGA-CCCAGATGCAAG--GAC-----TTTTTCATGGTTAGTGAAC-------ACATGT------T-----TATT---G-------A--AGTG-------TTCGTACGCAT-GAATTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAAGG--TTTG-TTGGACACTA-CTCGTTGA-GGAAAGCAG--TCGGAAGCAC-T--ATAGTTTTAGCAAAATTTAC--CCTT-CTGTCATGCTACGCCT--CAGT-GAAAA-ACAATGT---AATC----GTG-CTGTTGGAAT-GCTTCAAGCTGGAAT-GGCTCAATAT-ATCGTAGCAAGACAC-TTTGG-AGTTCA-----TC--AGAAC--AC---CATCC-AGTC-ATTATCGAGACGTTTCC-AACAAT----CTGGTAACATTCCGG--GATCGA-CCACGTTCT-GGGCGTCCT-G-TGTGA--CGT--CGCGTCG------ACAGG--C-AACCACATTA-GGCTTGTGC-ACC------TGAG-AAT---C-GTTT--------------------CC-----------------AGACAGCAAGTTTGACTGC-TTGTAGCATTCCTGG-A-CTTCACCCAATCAATCGTAGAAC--TGCGTAATC-GTCTGCGCGAGCACACCATCAGACGAAGACGTCCAACAATGCA-C-TCAA-TAT-------TACTTCA-A-CGTTATCGT-A------T----CG-CTAGACTAG-CGTG
gi|9 : ATATCGGATAGTACC-GA-CCCAGATGCAAG--GAC-----TTTTTCATGGTTAGTGAA--------ACATGT------T-----TATT---G-------A--AGTG-------TTCGTACGCAT-GAATTTTA-CTGGCCAATAG-GTTTGGA-GTA-AGAA------GTG-TAAAAGG--TTTGTT-GGACACTA-CTCGTTGA-GGAAAGCAG--TCGGAAGCAC-T--ATAGTTTTAGCAAAATTTAC--CCTT-CTGTCATGCTACGCCT--CAGT-GAAAA---AACATGTAAATC----GTG-CTGTTGGAAT-GCTTCAAGCTGGAATTGGCTCAATTA-ATCGTAGGCAGACACGTTTGG-AGTTCA-----TC--AGAC---AC---CATCC-AGTC-ATTATCGAGACGTTTCC-AACAAT----CTGGTA--ATT-CGG--G-TCGA-CCACGTTCT-GGGCGTCCTTG-TGTGA--GCT--CGCGTCG------ACAGG-AC-AACCA-ATTA-GGCTTGTGC-ACC------TGAG-AAT---C-GTTT--------------------CC-----------------AGACAG-CAAGTTGACTGCTTTGTAGCATTCCTGG-A-CTTCACCCAATCAATCGTAGAAC--TGCGTAATC-GTCTGCGCGAGCACACCATCAGACGAAGACGT-CAACAATGCA-C-TCAA-TAT-------TACTTCA-A-CGTTATCGT-A------T----CG-CTAGACTAG-CGTGG-
gi|13 : GTGAACAAATG-----T-----T--TATGG-------A--AGTG-------TTTGTACACAC-GAGTTTTA-CTGGCCAATACTGTTTGGAAGTA-AGAA------GTG-GAAAAGG--GTTGCTTGGATACACCTTCGTTAA-GGA--------A----AGCAC-TAATTAGTTT-GACAAAATCTAC--CCTT-CTGTCATGCCATGACT--CTGC-GAAAA-CCAACGT---ATTCGTAATCGTCTGTTGGGA--GCTTTAAGCTAGAAT-GGCACAAAAT-ATCTTAGCAAGACAC-TCTGG-AGCT
gi|2 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcaGAACACATGTTGTTTA----T--T---G-------A--AGT------A-TTCGTCGCCAC-GAGTTA-A-CTGG----------TTGGA-GTA-AGAATTCGAAGTG-TAAAAAG--GATTCTTGGACACTA-TTCGTTAA-GGAAATCACTTT----AGCATGT--TTAGTTTTGACAAAA--TAC--CCTT-CTGTCATGCCACGACTTCCAGC-AAAAAACCAACGTG--AATC----GTG-CTGTTGGGAT-GCTTCAAGCTGGAAT--GCATAACATAATCATAGCAAAAC----TTGGCAGTTCA-----TC--AGAAGGAACACGCATCCAAGTCGATTACGGAGACGTTTCTCAACAAT----CT-GTAACAAT-CGA--AATCGACCCACATTCTGGGGCGTCCTCG-TGTGAATCAT--CACGTCA------ACAGG-ACAAACCACATTAGGAC--GTGC-ACC------CGAGAAATATAT-TTTT--------------------CCCCCCCCCCCCCCCCCCTAGGCAGCAAGTTT-ACTGC-TCGTAATATTCCTGGAA-CTTGGACCAACCAATCCAAGAACT-CG-GTAATTCGTCTGT-TGGGCACAACATCAGACCA-GACGTCCAGC-GTGCGTC-CCAA-CACTAGTCCTTGCTTCA-A--GTCATAGTAA------T----CG-CTAGACTAGCCATGG-GAGCAGAC-GACATCGGCCATTCA-GAATATAGCAGTTCTGTTCAAACATGATG--A-ATCC-A------------GA----------T---------TT----C---ATA-G-A-AT-GGC-G-TG------TCCGTTGTAGATAACA-CGTCGCGTTGGGGAGTGGTAC---CAG-GACGCTCGTG-----TTGTGC-----CAACGTCGAAC-ATTCGGTGGAGGT--------TGG-G-------TGG-AA-TAA-CAG-----------------CTCTTACAAATTGTA--A-TGGAAATC----TCACCGGCGTAACGCTA-TCG----A-----GAAA-TACATTCAGCCGC-CAT-TG-TACACCCTT-----CAGAGACGGCAAAATCACATTACAT---CAGCAAGAAA-C-GCAAGACCACATAGTTGCCACGGTGTAGCCATGGAA--------TTTT--TTTG---TTCAACAGAATGATCGAT-GTCTGGTCCATGTCTTGCCTTGGCCAAGCT-GTTTTCC--CGATTAATCGCC-GATCGAAC--ACGTCTGAGAT-GAAATGGACG--ACG--T------CTACGCCGTCTTAC-CAAATCAG----CC-AGTGACATT--GGCTGATTTTAAGC-CA--GC-TTAA-CCAAC--CTCTTG-A-ACAACAT--------------------TCCCTCAAGCCATTTCTAATAACTT-----TAGTG----G-CAT-CAAATGAGGCGCAGTTATCAAAGCATATTAATGGTGTTACACCCCGCCAGTCACAC--------------GACGTTATTATATAC-TTATGATT--AATTCATGTTCGAATAggtaatacctgggattgaccactttttgggcgtcctcattttgacgtcacattaacaggaacaactcattagactgtgcaatgtgcacctgagaattcatttgcctgacaacagtttgactgctcttagca
gi|3 : GAACACAT------G-----T--T---G-------TTTATTGCAAGTAATTCGTACGCCCAGAGTTA-A-CTG-----------TTGGA-GTA-AGAATTCGAAGTGGTAAAAGGATTCTGTT-GGACACTA-TTCGTTTAAGGAATCAACTTT----AGCATGT--TTAGTTTTGACAAAA--TAC--CCTTTCTGTCATGCCACG-CC--CAGCAAAAAA-CCAACGTG--AATC----GTG-CTGTT-GGAT-GCTTCAAGCTGGAAT--GCATAACAT-ATCATAGCAAAAC----TTGG-AGTTCA-----TCAAGGAAAC-AC---CACCA-AGTCGATTACGGAGACGTTTC---GCAACCAATCTGGTAACAAT-CAGAAAATCGA-CCACATTCT-GGGC-TCCTCG-TGTGAT-CAT--CACGTC-------ACAGG-AC-AACCACATTAGGAC--GTGC-ACC-------GAGAAATATAT-TTTTCCCCCCCCCCCCCCCCCCCCCC-----------------AGGCAGCAAGTTTTACTGC-TCGTAAT-TTCCTGG-ACCTTGGACCAACCAATCCAAGAACTGCGTAT--TC-GTCTGT-TGGGCACAACATCAGACCAAGACGTCCAGC-GTGCG-CACCAAGCACTGTCCT-TGCTTCACA-CGTCATAGT-A------T----CGCTCAGACTAGCCATGGAG-GCAGACAGACATCGGCCA-TCA-GAATA-ATAG---CAGTTCTGTTTT--TCAAA-ACTG-ATT----------GA----------A---------TT----CCAGATT-T-C-ATAAGCAACTGGC-GTTGTCGTTGTAGATAACA-CGTC-CGTTGGTGAGTGGTAC---CA--GACGCTCGTG-----TTGTGC-----CAACGTC-GAC-ATTCGGTGGAGGT--------TGG-GTG------GA-AA-TAA-CAGC------------------TCTACAAATTGTCAAA-TGGAAATC----TCACCGGCGT-ACGCTTATCG----A-----GAAA-TA--TTCAGCCGC-CAT-TG-TACACCCTT-----CAGAGACGGCAAAATCACATTACAT---CAGCAAGAAA-ACGCAAGACCACAT-ATTGCCACGT-GT---------AGCG-----CTGGAATTTTTAGTTCAACAGAATGTATCGATGTCTGGTCCATGTCTTGCCTTGGCC-AAGC-TGTTTTCCCCGATTAATCGCC-GATCGAAC--ACGTCTGAGAT-GAAATGGA----ACG--A---CGTCTACGCCGTCTTACGCAAT-CAG----CC-AGTGACATT--GGCTGATTTTAAGC-CA-GGCTTTAA-CCAACCTC---TT-A-ACAACAT--------------------TCCCTCAAGCCATTTCTGAATACTT-----TAGTG----G-CATCC-AATGAGGCGCAGTTATC-AAGCATAT---------T----AATGGTGGTTACACCCCGCCAGATCACAG-CGT-TTTATATACATT-TGATT--AA-TCATGTTCGAATAtccagcgtctttcaagtagtgctcgaaattgaggtt
gi|10 : ACACAT------G-----T--T---GTTT----ATTAATG----TG-TTCGTACGCAC-GAGTGTTA-CTGGCCAATACTGTTTGGC-GTA-AAAC------TTG-TAAAAG------------ACACTA-TTCGTTAA-GGA--------A----GACAC-T--TCAGCGTATACAAAA--TGTACCCTC-CTGTCATGTCATGGTT--AAGA-GAAAA-CCAAAGT---AATT----GTG-CTGTTGAGAT-TCTTTAAGTTGGAAT-GGCACAAACG-ATAGTAACAAGGCAC-TTTGG-AGTCCA-----TC--GAAAC--AC---CATCT-AGTC-ATTATGGAGACGTTTAC-AACAAT----CTGGCAACACT-CAG--GATCAA-CAACATTCT-GGGTGTCCTCG-TGTGA--CGC--CGAGTCG------ACATG-AC-AGCCACATTA-GACTTTTGC-ACC------TGAGAAAT---C-GTTT--------------------CC-----------------AGA-AGACAGTTT---------GTAGTATT-TTGG-A-GTTCGACCAATTAGTCCAAAAACAGTGCGTAATC-GTCTGTGCGAGCACAACATCAGACGAAGACGTCCAGCGGTGCG-T-CCAA-CAC-------TGCTTCccagcgtctttcagtagtgcgaaattgagcg
gi|13 : atattccataccctctaaacaatagataaaggtggtgttttttaacatatcggatagttcccgactcaaatgtgcagAG-CTGGTAATACC-TGG--GATTGA-CCACTTTTT-GGGCGTCCTCATTTTGA--CGT--CACATTA------ACAGGAAC-AACT-CATTA-GAC-TGTGCAATGTGCACCTGAGAATT---CATTTG--------------------CC-----------------TGACAA-CAGTTTGACTGC-TCTTAGCAg
gi|4 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcagtgaacaaatgtttatggaagtgtttgtacacacgagttttactggccaatactgtttggaagtaagaagtggaaaagggttgcttggatacaccttcgttaaggaaagcactaattagtttgacaaaatctacccttctgtcatgccatgactctgcgaaaaccaacgtattcgtaatcgtctgttgggagctttaagctagaatggcacaaaatatcttagcaagacactctgg--GATCGA-CCACGTTCT-GGGCGTCCTCG-TGTGG--TATTCCTCGTCCTCTTTTACAGG-AC-AAAAACATTA-GACTTTTGC-ACCTG------GGGAAT---C-GTTT--------------------CC-----------------AGACAGCAAGTTTGACT-------AGCATTCCTGG-A-CTTCGACCAATCAGTCCAAGAACTGTGCGTAAAC-GACTGCACGAGCACAACACCAGAACAAGATGCCCAGCGGCGCG-C-CCAA-TAC-------TGCTTCA-A-CGGCATTGT-A------T----CG-CTAGACTAT-CGTAG-T-GCATAC-TACATCTGCGATTTA-GAATACAGGA---CTGGGCCAATAA--TC--T-GTCC-ACT----------GATGAATCCAGGT---------TT----C---ATT-TGA-AT-AGCAG-TGAC-A--GCCGATGTAGAGTGTATCGTCTCGTTGGGGAGCGGTAC---CAG-GACGC--TTGTT----------TGTGTAACGTC-AACAAGTCGGTGGTGGTAGCG-TTAT-G-GTGAGTGGTGG-AA-TAA-CAG--CAC----GTG-GA-C--TCTACAAATTGTCA-A-TGGAAATC----TCACTGGCGC-ACGGTA-TC-----AAAA-CGAAATTA--TTCA-GCGC-TATGTG--ATACCCTT-CCTACAGAGACAGCTTAATCACATCTC-TCTGCAGCAAGACACC-GTAAGGCCACAT-GTTG-CACGT-GT---------AGTCAGGGGCTTT--TTTG---TTCAACAGAAT--------GT-CG----ATGTCTTGCCTTGGCC-AGCT-GTTTCCCC-AGATTTATCGCC-GATAGAGC--ACGTCTGGGAT-GAAATGCA----ACG--A---CGTCTA---CGTTT-AC-CAAA-TGT---GCC-AGTGAAATTTGGCTT-CTTT--AGGCCA-GGC-TTCA-CC---------------CAA---------GATCAGATTCTATAATGTTCAA--CATCCCTAAACATTT-----TAG-T----GTCAT-C-AATGAGGCGCCGTTGTC-AGGCCTGC--GTG--AATGCA-AATGGTGGACACAC--------------G-CAATATCA---AT-TT-T--TTAAAATTCAAATTCGAAT
gi|6 : A-TTC-------CGTTTCA-AACGTCATCGT-AATCGGAT----CG-CTAGACTAG-CGTGG-T-GCAGAC-GACATCTGCGATTCA-GAATACAGGA---CTGGGTCAATAT--TC--T-GTTC-ACT----------GA----------TAAATCCAGGTT----C---ATTGT-G-AT-AACAA-TGGC-G--GCCGTTGTAGAGTGTATCGTCGCTTTGAGGAG----------------------------TTGTAT-TGTGCAACGTA-GACAATTCTATGGAGGCAGTT-TTTTGA-TTTGGG--TGGAAA-A-A-CAGC-TTG-TGGAAGTAC-CCTTCTAAATATTTTCA-A-TGGAAATTTGGCTCTTTG--AT-AC-TTT-TCACACTGAGACCGAAAgccagtgtctttcgagtgagctgaaataggcgttattcaacgttaaaattaatgggttatgaaatgttggaacgaatacatttgttaacagtattacaaaaaacaaaatatgttcattgttatactttattatcttttttttccatatatcaaataatgcacagtttcttttttcctctggtatatctttaatctgctttataatgcagagttttgttcattttcaaacattgcggcaacgtagaa
gi|18 : ttgtGCTCTG-G-CGTCCCCGTGA------TGCGATG-CGAAATTAG-CTTGG-T-GTAAGA-GGCATCGTCGTTTCAAGAA---AAGA---TTGGACGGATAT--TCT-ATATTCGAAC----------GA----------G---------TCGAAAC---ATC-T-CGAC-AGCAT-TGAG-G--GTCGTGTTTGCGCTTACCGTTGTTCCGAAGAACGTTACATTCAATGACATCTGTGTTA--TT---------CAGCGCC-ACCAATTCGTCGGAAGGAGCGCTTAT-G-GTCTGCTGTGG-AATT-A-CAACACAT-GGAAGGAaatcaaatcactctgcaacaagtcaacgcaagaccacatgttgcacgtgtaggcagggcctcttttgttcgatagaatgtcgatgtcttgccttgtccagctgtttccaccgatttcacactaatcgagcacttctggaatgaaattgaacgacacgtacatctacgccgttcaccaaatcagctagtatcattttctggtcagactttaaccaacacctgtaacaacatctcaaatatgtctgaacactttaaatagtggcatgaatgaggcgccgttggcaagcatgtgtacatgcaaatggtggtcacacgcactattaactttgttaattcaaattcgaatactactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|19 : ctgctatctgtcccgatcaTAGGCTAG-CGTGG-T-GCAGAG-GTCATCTGCGATTCA-GAATACAGGA---CTGGGCCAATAT--TC--T-GTTC-ACTGATGAATCCAGA----------T---------CT----C---ATT-TGG-AT-AGCAG-TGAA-G--GCTGTTGTAGAGCGTATCGTTTGGTTGGGGAGCGGTGC---TAG-GATGTTTGTGT-----------TGTGCAACGTC-GATAATTCACTGGAGGTAGCA-TAATGGCGTGGGG--TGG-AA-TAA-CAG--CACGTGAAccc
gi|12 : cTGGAGGTGGCC-TTATGGTGTGGGG--TGG-AA-T-AACAGCACGC-GGAAGGAC--CCCTCTACAAATTGTC--AACGGAAATCT----CACCGGCCT-ACGCTA-TCG-----ACA-CAAAATTA--TTCA-GCGC-CATGTGATA--CCCTT-CATACAAAGACAGCAAAATAGCATCAC-TCTGCAGCAAGACA-ACGCAAGGCCATAT-GTTG-CACGT-GTAGTCAGGG-A--------CTTT--TTTG---TTCAACAGACT--------GT-CG----ATGCCTTGGCTTGGCC-AGCTGTTTCTCCCGACTTTTATCGCC-GATCGAGC--ACGCCTGGGAT-GAAATGGA----ACGACT---T--CTACGCCGTTT-TC-CAAATCAG-----CTAGTGAAATT--GGCTGGTTT--AGGCCA-GACTTTAA-CCAACATC---TG-GAACAACAT---------------------CCCTCGAG-CATTTCTTAACACTTACTTGTAAGTG---G-CAT-C-AATGAAGCGCCGTTGTC-AAACATGC--GTG--AATGCC-AATGGTGGTCAAAC--------------G-CATTATTA---AC-TT-aggactcctc
gi|7 : ----GAGA-CGAGATTA--TTCA-GCACATATGTGATA--CCCTT-CATACAGAGAA-ACAAA-TCACATAGC-TTT-CAACAAAACA-ATGCAAGGTCACAT-GTTG-CACGT-GT---------AATCAGGG-CTTTA--TTG---TTCAATAGAAT--------GT-CG----A-GTCTTGTCTTGTCC-AGAT-GTTTCCCC-CGATTTATCGCC-GATCAAAC--ATGTCTTGGATGAAAATGAAC---AA-------C--ATAAGTC----AAC-------------GC-AGTGTCATT--GGCTGATTT--CGG-CCTGACTTTAATCCACCATC---TG-G-ACAACAT--------------------TCCCACAA---ATTCCTGAGTACTT-----TAGTG----G-CAT-C-AATGTGACACCAATATC-AAACATGG--CTA--AATGCA-AATGGTGGTCAGACG-------------G-CGTTATTA---AC--T-TG-TT--AATTCAAGTT-GGATA
gi|6 : tatcATACTTTT-CACACTGAGACCGAAAAATCAAATCAC-TCTGCAACAAGTCA-ACGCAAGACCACAT-GTTG-CACGT-GT---------AGGCAGGGCCTCT--TTTGT--T-CGATAGAAT--------GTC-G----ATGTCTTGCCTTGTCC-AGCT-GTTTCCAC-CGATTTCACA-CTAATCGAGC--ACTTCTGGAATGAAATTGAACGACACG--TACAT--CTACGCCGTTCA-C-CAAATCAG-----CTAGTATCATT--TTCTGGTC---AGA-C----T-TTAA-CCAACA-CC--TGTA-ACAACATCT-----------------------CAAA-TATGTCTGAACACTT-----TAAATAGTGG-CAT-G-AATGAGGCGCCGTTGGC-AAGCATGT--GTA--CATGCA-AATGGTGGTCACAC--------------G-CACTATTA---AC-TT-TG-TT--AATTCAAATTCGAATAtaatggctttagattgtggctaaattgacgttattcgacattaacattaaataatttatgaatgctgtaacgaatataatttgtttattgttatttttaaattattttcttcatatattaaattaaagtaatacacattttctttttttttttttcgctagtatacatgtataatggcagccaaattttcttactctctgtttgaagtgcatgcaatgtagaa
gi|11 : ttgtattccgtttcaaacgtcatcgtaatcggatcgctagactagcgtggtgcagacgacatctgcgattcagaatacaggactgggtcaatattctgttcactgataaatccaggttcattgtgataacaatggcggccgttgtagagtgtatcgtcgctttgaggagttgtattgtgcaacgtagacaattctatggaggcagttttttgatttgggtggaaaaacagcttgtggaagtacccttctaaatattttcaatggaaatttggctctttgCG----ACATCTTTCAATGGCC-AGCA-CTTTCGCC-CGATTTATCGCC-AATCGAGCctactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|16 : attcctggattgcgtcgatcagtcgtcgaacagttcaacgacgtttgtcggctgcaggtctacgtgcacgacgcccataaaaaggacctatgctgacccaaacagaacgacttcaatgggctcgacgttacttgagatggaagcttgcagactggaatcacgttctgtttagtgatgaatcacgcttcatgctgcgccgagtggatggcataacatgtgtgtaccgtagacacggtgaacgcttctctgatggatgtgtgctaggccatgaccgctttggaggcggaagtgtaatgatgtggggcggaataagtggtaatcgacgaacagatattgtaccgatcattgggacattaaatacacaacgataccgtaatgaaatccttgcacaacaattccgaccctttatcgctgcaaatggcggaattttccaacaggataatgcccgcccacacgttggaagagccagcagagactttcttgccaacaaccacatCCCCCGATTTATCG-CCGATCAAGC--ACATTTAGGATGAAA-TGGA----ACG--A---CGTCTGCGCAGTTTA-C-CAAATCAG---C-C-AGTGACATT--GGCTGATTT--AGGCCA-GGCTTTAA-CCTACATC---TG-A-ACACTTTAGTGGCATCAATGAGGCGCTGTTGTCAAG-CATTCGTGAAacctct
gi|17 : gtgtttGATAAAA-TGGA----ACG--A---CATCTACGCCGTTT-AC-CAAATCAGCCTGCC-AGTGATATT--------------GG-C--GGA-TTAA-CTAACA-CG--TG-GAACAACATtgcaaatggtggtcatacgctttattaactttgttaattcaagttcgaataccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|16 : TCTGAACACTT-----TAGTG----G-CAT-C-AATGAGGCGCTGTTGTC-AAGCATTC--GTG--AATGCA-AATGGTGGTCATAC--------------G-CTTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATAccatcaagccagtggcatcaatgatgcgctgttttcaaacatgcgtgaatgcaattggtggtcacacgcgttattaactttttaaatttaagtttgaatatcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|17 : gtgtttcccccgatttatcgccgatcaagcacatttaggatgaaatggaacgacgtctgcgcagtttaccaaatcagccagtgacattggctgatttaggccaggctttaacctaca----G-CAT-C-AATGATGCGCTGTTTTC-AAACATGC--GTG--AATGCA-ATTGGTGGTCACAC--------------G-CGTTATTA---AC-TT-TT-TA--AATTTAAGTTTGAATAccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|20 : gataaaatggaacgacatctacgccgtttaccaaatcagcctgccagtgatattggcggattaactaacacgtggaacaacatccatcaagccagtgGGTTACAT--------------G-CGATATTA---AC-TT-TG-TT--AATTCAAGTTCAAATAtcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|21 : at---AC-TT-TG-TT--GATTTAAATTCGAATAttattgtctttcgagtgtgctgaaattgacattaatggattatgaaatgttgtaacgaatacgtctgttgaaagtatcacaaaaataaaatttgttcattaagttttatataatttcatatataaaaaacacacggtttctttttctgctagtatatttag
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|25 ): TGGGCCAGACGTCATCTGAGATTCACGCATGCGGACTGGAGTAGAGTTATCTTCACCGACGAGTCCAGGTTCAATCTACGGCGAACGGATGGGCAAAACCGTTTCTATCGAAAGGGAGAACGC
Unaligned ( gi|26 ): AACAGTGCGTGTTGTATTCGTACATACTCTTGTGCGAATAAGTTGCATCTACACCTGCATTTTTAATTGCCACCAATTCAATAGAGGGGACGATATGGTCTGGGAAGAATTACAACATATG
Unaligned ( gi|27 ): AGTTTGTTGCAAAATAATTCCAAGTCCGAATACCAATGTCTTTCGAGTGTGTTGAAATTGACGATATTCGACGTTAACATTAATGGATTATGAAA
Unaligned ( gi|28 ): CATTTCAAGAATATCACGATTGGGCGAAAATTCTTTTTACGGAGGAATCTTGACAGCAGTACCGGTCGTGTTTGGGCTTCCGTCGTGCCGGAG
Alignments
lowQualScore : 2 5555555555555555555555555555555555555555555 1111 222222 666666666666666666666 111111 111 11111 11111 1 1 11 1111111 1111111 111 55555555555555555555555555555555555555555 11 11111111111111 11111111111 11111111 5555555555555555555555555555555555555 1111 1111 5555555555555555 1 1 777777777777777777777 2222 1 22 1 1 1111111111 55555555555555555555555 1 11 2 111111 444444444444444444444 11 111111111 2222222222222 22222222222222 111
lowQualScore : 66 5 0 2 4 66 5 6 2 5 6666666666666666666666666666666666666666666 1111 4 4 0 4 0 4 4 333333 4 4 1 55 55 4 000000000000000000000 8 55 4 4 0 2 55 8 111111 555 4 4 1 4 4 3 0 4 4 11111 888 11111 5 5 1 1 1 5 888 0 5 66 4 4 4 00 66 4444444 4 4 8 7777777 9999 3 222 55555555555555555555555555555555555555555 6 5 4 1 5 5 11 7 5 4 0 6 4 4 4 77777777777777 4 4 4 77777777777 4 8 666 4 2 8 9999 0 777 66666666 1 2 66 1 66 3333333333333333333333333333333333333 0000 1111 5 0 66 0 0 4 5 2 888 5 1 8888888888888888 0 3 77 7 3 2 000000000000000000000 5 77 6 5 3333 55 5 1 5 4 44 4 88 2 4 5 0 88 1 0 5 0 777 77 9999999999 66 5 5 11111111111111111111111 0 4 66 66 99 777 3 1 55 3 8 4 4 4 9999 4 4 4 0 3 0 4 5 4 888888 4 111111111111111111111 2 0 00 0 777777777 4 4 4 555 1 2222222222222 77777777777777 4 444 4 4 8 66
lowQualScore : .. . . . . .. . . . . ........................................... .... . . . . . . . ...... . . . .. .. . ..................... . .. . . . . .. . ...... ... . . . . . . . . . ..... ... ..... . . . . . . ... . . .. . . . .. .. ....... . . . ....... .... . ... ......................................... . . . . . . .. . . . . . . . . .............. . . . ........... . . ... . . . .... . ... ........ . . .. . .. ..................................... .... .... . . .. . . . . . ... . . ................ . . .. . . . ..................... . .. . . .... .. . . . . .. . .. . . . . .. . . . . ... .. .......... .. . . ....................... . . .. .. .. ... . . .. . . . . . .... . . . . . . . . . ...... . ..................... . . .. . ......... . . . ... . ............. .............. . ... . . . ..
lowQualScore : 99 0 0 5 0 99 0 5 5 6 8888888888888888888888888888888888888888888 4444 0 0 8 0 8 0 0 000000 0 0 0 33 55 0 666666666666666666666 0 55 7 0 8 2 55 0 555555 000 0 0 6 9 0 2 8 0 0 11111 888 66666 0 7 4 4 4 7 888 2 0 11 4 4 4 66 11 7777777 4 4 9 3333333 4444 6 222 00000000000000000000000000000000000000000 9 7 4 9 0 0 00 6 0 5 1 5 4 4 0 77777777777777 4 4 4 77777777777 0 0 444 4 6 9 4444 1 888 11111111 1 0 99 0 99 1111111111111111111111111111111111111 6666 2222 0 9 99 2 4 2 1 5 888 0 4 8888888888888888 0 6 33 8 9 2 999999999999999999999 7 99 7 7 4444 99 7 4 7 3 77 4 00 1 4 4 0 99 4 2 0 0 111 66 0000000000 99 0 0 99999999999999999999999 0 4 11 11 22 888 3 1 44 7 9 4 4 4 4444 4 4 4 1 7 8 4 2 4 222222 4 888888888888888888888 3 3 88 7 777777777 4 4 4 999 1 0000000000000 55555555555555 0 000 0 0 9 11
consensus : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATC-----AG---AAC----AC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA----CAGGA---CTG--------GGCCAATAT--TCTGT--TC--ACT----------GA----------T---------TT----CATTTGGATAGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--AA--G-AC-CCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCCA-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATG---GA-ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTT-AGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
Reference ( family-632 ) : ATAAGGGTGA--T-GTTTTT-AACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTC------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATC-----AG---AAN----AC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCNAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCNGCGATTCA-GAATA----CAGGA---CTG--------GGCCGATAT--TCNGT--TC--ACT----------GA----------T---------TT----CATTTGGATAGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--AA--G-AG-CCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGGAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGT-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCCA-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGGAAATG---GACACG-NCGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTT-AGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|1 : ATAAAGGTGA--T-GTTTTTGAACAACATCGAATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTTATGGTTAGTCAACTTGGTGAACA--C-----ATT-----T--TG--------AAGTGCATATTCGTATGC-AC-GAGTTTTA-CTGGCCAATATTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTATGT-TTGG--ACACAATTCATT-TGGGA-------------T--------AGCAC-T--TTAGTTTTGACAAAAGTTGTCCTT-ATGTCATGCCACGACT--CGGCGAAAA-CCAA------CGT---AATCTTGCTGTTGGGATG-CCTCAGGCTGGAA-TGGCACAAAATA-TCGTTGCAAGACAC-TTTGG-AGTTCATT-----GG---AAG----AC-CATCCA-GTC-ATTGTGGAGACGTTTC-TAAC-AATCAGCTGGTAACACT-CGGGA--TCGACC-ACGTTTTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------AAAGG-ACAA-CCACATTAG-ACG------TGTGCACCTGCATGAGAAAT---CTTTT----------------------CC-----------------AGACAGTCAGTTTAACTGC-TCGTAGCATTCTTGGA-C-TTCGACCAATCAGTCCAAGGACTGTGTGTAAT-TGTCTGCGTAAGCACAACGTTAGACCACGACGTCCAGCGGTGCG-C-TCAA-TACT-------G------CTTCA-G-CGTCATCGT-A------T----TGTT-GGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA----CAGAA---CTG--------GACCAATAT--TCAGT--TC--ATT----------GA----------T---------TT----CATTT-CATAGCAG-TGACA--GCCGTTGTAGAGTGTATCGTCGCCTTGGGGAGCGATAC---CAG-GACGCTTTTGTTAAATTGTACATGTGC-AACGTCAACAATTCGGTGGAGGTAGCG-TTACGG-GTGAGCTGGAAT-ACAGC-CAC-T-G--AAT-G-AGACCTTCTACAAATTGTC-A-TGGAAATCTATCATCGGCGTA-C-CT-CTCGGAGACGAAAT-TACTTCATC-GC-CATGTGATATACCCTTACAT-ACAG-AAAC-GCAAAATCAC-TCAC-TCTGCAGCAAGACAA-ACAAGGCCACAT-GTTGC-ACG-TCGTA---------------TTTTAATTTGTTTCAACAGA-A-G-------T--------CCG----ATGTCTTGCATTGGCCA-GCCCCCCCCCCTCCA--TTTATCG-CGATCGAGCTGACGTTTGGGATAAAAATG---GA-AAG-TC--CTACGCCGT-TTAACCAAA-CAGAA-C----AGTGACA-TTGCTTGA-TTT-AGA-CAGGC-TTAA-CCAACA-C-TG-G----A-CAACGTNNNNNNNNNNNNNNNNNNNNNNNNNCAAG-CATTTTTGAACACTT----T----AGATGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGTACGAATACAAATGGCG-------------GTCACAC--------------G-CGTAATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|10 : ATAAAGGTGG--T-GTTTTTTAACA-TATCGGATAGTTCCCGA-CTCAAATGTGCA--GAC-A----CATG-----TT------GT--------------TTA----T--TA--------ATGTG----TTCGTACGC-AC-GAGTGTTA-CTGGCCAATACTGTTTGGC-GTA-AAAC------TTG-TAAAA-G-------------ACACTATTCGTT-AAGGAA---G--------A----------CAC-T--TCAGCGTATACAAAATGTACCCTC-CTGTCATGTCATGGTT--AAGAGAAAA-CCAA------AGT---AATTGTGCTGTTGAGATT-CTTTAAGTTGGAA-TGGCACAAACGA-TAGTAACAAGGCAC-TTTGG-AGTCCATC-----GA---AAC----AC-CATCTA-GTC-ATTATGGAGACGTTTA-CAAC-AATC---TGGCAACACT-CAGGA--TCAACA-ACATTCTGGG-TGTCCTCG-TGTGA--CGC--CGAGTCG------ACATG-ACAG-CCACATTAG-ACT------TTTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGA-AGACAGTTT---------GTAGTATT-TTGGA-G-TTCGACCAATTAGTCCAAAAACAGTGCGTAAT-CGTCTGTGCGAGCACAACATCAGACGAAGACGTCCAGCGGTGCG-T-CCAA-CACT-------G------CTTC
gi|11 : atattccataccctctaaacaatagACCCTT-TATCGCTGCAAATGGCGGAAT---------TTTCCAACAGGATAATGCCCGCCCACAC-GTTGG-AAG-----AGC-CA-GCAGAGA--CTTT--CTTG-C-CAACAACCACA-------T--------C-G----ACATCTTTCAATGGCCA-GCACTTTCGCC-CGA--TTTATCGCCAATCGAGC--ACCTCTg
gi|12 : attcctggattgcgtcgatcagtcgtcgaacagttcaacgacgtttgtcggctgcaggtctacgtgcacgacgcccataaaaaggacctatgctgacccaaacagaacgacttcaatgggctcgacgttacttgagatggaagcttgcagactggaatcacgttctgtttagtgatgaatcacgcttcatgctgcgccgagtggatggcataacatgtgtgtaccgtagacacggtgaacgcttctctgatggatgtgtgctaggccatgaccgctttggaggcggaagtgtaatgatgtggggcggaataagtggtaatcgacgaacagatattgtaccgatcattgggacattaaatacacaacgataccgtaatgaaatccttgcacaacaattccgTGGAGGTGGCC-TTATGGTGTGGGGTGGAATAACAGCACGC-G-G--AA--GGAC-CCCTCTACAAATTGTCAA-CGGAAATC--TCACCGGCCTA-CGCT-ATCG-ACACAAAAT-TA-TTCAGC-GC-CATGTG--ATACCCTT-CAT-ACAA-AGACAGCAAAATAGCATCAC-TCTGCAGCAAGACAACGCAAGGCCATAT-GTTGC-ACG-T-GTAGT-CA-G----GGA-CTTT--TTTG-TTCAACAGA-CTG-------T---------CG----ATGCCTTGGCTTGGCCA-GCTGTTTCTCC-CGACTTTTATCGCCGATCGAGC--ACGCCTGGGAT-GAAATG---GA-ACG-ACTTCTACGCCGT-TT-TCCAAATCAG-C-T----AGTGAAA-TTGGCTGG-TTT-AGGCCAGACTTTAA-CCAACATC-TG-GA---A-CAACA---------------------TCCCTCGAG-CATTTCTTAACACTTAC--TTGTAAGTGGCAT-C-AATGAAGCGCCGTTGTC-AAACATGCGTGAATGCCAATGGTG-------------GTCAAAC--------------G-CATTATTA---AC-TT-
gi|13 : ------GTGAACAAAT-----GTT-----TA-TGG-------AAGTG----TTTGTACAC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGAAGTA-AGAA------GTG-GAAAA-GGGTTGC-TTGGATACACC-TTCGTT-AAGGAA---------------------AGCAC-TAATTAG-TTTGACAAAATCTACCCTT-CTGTCATGCCATGACT--CTGCGAAAA-CCAACGTATTCGT---AATCGT-CTGTTGGGA-G-CTTTAAGCTAGAA-TGGCACAAAATA-TCTTAGCAAGACAC-TCTGG-AGCT
gi|13 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcaC---TGGTAATACC-TGGGA--TTGACC-ACTTTTTGGG-CGTCCTCATTTTGA--CGT--CACATTA------ACAGGAACAA-CT-CATTAG-ACTGTGCAATGTGCACCTG----AGAATT---CATTTG---------------------CC-----------------TGACAAC-AGTTTGACTGC-TCTTAGCAggtaatacctgggattgaccactttttgggcgtcctcattttgacgtcacattaacaggaacaactcattagactgtgcaatgtgcacctgagaattcatttgcctgacaacagtttgactgctcttagca
gi|14 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcagtgaacaaatgtttatggaagtgtttgtacacacgagttttactggccaatactgtttggaagtaagaagtggaaaagggttgcttggatacaccttcgttaaggaaagcactaattagtttgacaaaatctacccttctgtcatgccatgactctgcgaaaaccaacgtattcgtaatcgtctgttgggagctttaagctagaatggcacaaaatatcttagcaagacactctggagATAAGGGTGA--T-GTTTTT-AACTATATCG-ATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTAACTGGCCAATACTGTTTG-A-GTACAGAA------GTG-TAAA--GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATGGTTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGA-AC-TTTGG-AGTTCACCAATTTAG---AAA----AC-
gi|15 : gtatactaacgaaaaaaagaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaaatcgATAAGGGTGA--T-GTTTTT-AACTATATCGGATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTA-CTGGCCAATACTGTTTTGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATG-TTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGACAC-TTTGG-AGTTCACC-----agcca
gi|16 : tatactaacgaaaaaaagaaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaatcgTGTTTCCCC-CGA--TTTATCGCCGATCAAGC--ACATTTAGGATG-AAATG---GA-ACG-ACGTCTGCGCAGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTT-AGGCCAGGCTTTAA-CCTACA-----------------------------------------------------TCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCTGTTGTC-AAGCATTCGTGAATGCAAATGGTG-------------GTCATAC--------------G-CTTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|17 : gAAATG---GA-ACG-ACATCTACGCCGT-TT-ACCAAATCAG-C-CTGCCAGTGATA-TTGGCGGA-TT--------------AA-CTAACACG-TG-G----AACAACAT---------------------CCATCAAG-C------------------C----AGTGGCAT-C-AATGATGCGCTGTTTTC-AAACATGCGTGAATGCAATTGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TT-TA--AATTTAAGTTTGAATAccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|18 : gata-C-CCGA-T-CA-------G------CTCTG-G-CGTCCCCGTGA------TGCGATGCG-AAATTAGC-TTGG-T-GTAAGA-GGCATCGTCGTTTCAAGAA-------AAGA---TTG--------GACGGATAT--TCTATATTCGAAC-----------GA----------G---------TCGAAACATCTCGACAGCAT-TGAGG--GTCGTGTTTGCGCTTACCGTTGTTCCGAAGAACGTTACATTCAATGACA-TC-TGT------GT---TATTC-AGCGCCACCAATTCGTCGGAAGGAGCGCTTATGGTCTGCTGTGGAATTACAACACAT-G-G--AA--G-GA-CCCtcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|19 : ctgctatctgtCT-AGGCTAGC-GTGG-T-GCAGAG-GTCATCTGCGATTCA-GAATA----CAGGA---CTG--------GGCCAATAT--TCTGT--TC--ACTGATGAATCCAGA----------T---------CT----CATTTGGATAGCAG-TGAAG--GCTGTTGTAGAGCGTATCGTTTGGTTGGGGAGCGGTGC---TAG-GATGTTTG--------TGT---TGTGC-AACGTCGATAATTCACTGGAGGTAGCA-TAATGGCGTGGGGTGGAATAACAG--CACGT-G--AAAGG-AC-TCCTC
gi|2 : GAACA--CATGTTGTT-----TATTG--------AAGTA----TTCGT-CGCCAC-GAGTT-----------A-ACTGGTTGGA-GTA-AGAATTCGAAGTG-TAAAAAGGATT-C-TTGG--ACACTATTCGTT-AAGGAA---A--------TCACTTT--AGCATGT--TTAGTTTTGACAAAAT--ACCCTT-CTGTCATGCCACGACTTCCAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TG-CATAACATAATCATAGCAAAAC----TTGGCAGTTCATC-----AG---AAGGAACACGCATCCAAGTCGATTACGGAGACGTTTCTCAAC-AATC---TG-TAACAAT-CGAAA--TCGACCCACATTCTGGGGCGTCCTCG-TGTGAATCAT--CACGTCA------ACAGG-ACAAACCACATTAGGAC--------GTGCACCCG----AGAAATATATTTTT----------------------CCCCCCCCCCCCCCCCCCTAGGCAGCAAGTTT-ACTGC-TCGTAATATTCCTGGAAC-TTGGACCAACCAATCCAAGAACT-CG-GTAATTCGTCTGT-TGGGCACAACATCAGACCA-GACGTCCAGCG-TGCGTC-CCAA-CACTAGTCCTTG------CTTCA-A--GTCATAGT-AA-----T----CGCT-AGACTAGCCATGG-GAGCAGAC-GACATCGGCCATTCA-GAATA----TAGCAGTTCTG--------TTCAAACATGATGAAT--CC--A------------GA----------T---------TT----CATA-GAATGGC-G-TG-----TCCGTTGTAGATAACA-CGTCGCGTTGGGGAGTGGTAC---CAG-GACGCTCGTGT----T-------GTGCCAACGTCGAACATTCGGTGGAGGT-------------TGGG-TGGAATAACAGC-T-------------------CT-TACAAATTGT-AA-TGGAAATC--TCACCGGCGTAACGCT-ATCGA----GAAATACA-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGA-AACGCAAGACCACATAGTTGCCACGGT-GTAGC-CA-T----GGAATTTT--TTTG-TTCAACAGA-ATGATCGATGT--------CTGGTCCATGTCTTGCCTTGGCCAAGCTGTTTTCCC--GA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATG---GAC--G-ACGTCTACGCCGTCTT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGATTTT-AAGCCAG--CTTAA-CCAACCTCTTG-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTAATAACTT----T----AGTGGCAT-CAAATGAGGCGCAGTTATCAAAGCAT------ATT--AATGGTGTTACACCCCGCCAGTCACAC--------------GACGTTATTATATAC-TTATGATT--AATTCATGTTCGAATA
gi|20 : TG-------------GTTACAT--------------G-CGATATTA---AC-TT-TG-TT--AATTCAAGTTCAAATAtccagcgtctttcaagtagtgctcgaaattgaggtt
gi|22 : aATAAAGGTGC--TTGTTTTT-AACAATATC-GATAGTATCCGATCTCAGATttattgtctttcgagtgtgctgaaattgacattaatggattatgaaatgttgtaacgaatacgtctgttgaaagtatcacaaaaataaaatttgttcattaagttttatataatttcatatataaaaaacacacggtttctttttctgctagtatatttag
gi|23 : aagaaaatattctaagtataactggcggaaaaagaaactgctgcattagaaatttagtatatttttccccttaatttattgtttatatttatagactattgtttatatttataatcttaacaatcgATAAGG-TGACTT-GTTTT--AACAATATC-GATAGTATCCGA-TT
gi|24 : ataactggcggaaaaaagaaacttgctgcatagaaatttagtataatttccccttaatttattgtttatatttatagactattgttatttatttaataatcataaacaatcgATAAGGGTGA--T-GTTTCTGAATAACATTTGATAGTACCCGA-CCGAGATGTACG--GACATTTTTGATGGTTA---------GTGAACA--C-----A----------TG--------AAGTG----T
gi|25 : aaactttttttgtccagtatatatacaaaatataaacattcgCAGAC-GTCATCTGAGATTCACGCATG----C-GGA---CTG--------G
gi|3 : tgggcGAACA--C-----ATG-----T--TGTTTATTGCAAGTAA---TTCGTACGC-CCAGAGTT-----------A-ACTGTT-GGA-GTA-AGAATTCGAAGTGGTAAAA-GGATTCTGTTGG--ACACTATTCGTTTAAGGAATCAA--------CTTT-----AGCATGT--TTAGTTTTGACAAAAT--ACCCTTTCTGTCATGCCACG-CC--CAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGG-ATG-CTTCAAGCTGGAA-TG-CATAACATA-TCATAGCAAAAC----TTGG-AGTTCATC-----AAGGAAAC----AC-CACCAA-GTCGATTACGGAGACGTTTCGCAACCAATC---TGGTAACAAT-CAGAAAATCGACC-ACATTCTGGG-C-TCCTCG-TGTGAT-CAT--CACGTC-------ACAGG-ACAA-CCACATTAGGAC--------GTGCACC-G----AGAAATA--TATTTTTCCCCCCCCCCCCCCCCCCCCCC-----------------AGGCAGCAAGTTTTACTGC-TCGTAAT-TTCCTGGA-CCTTGGACCAACCAATCCAAGAACTGCG--TATT-CGTCTGT-TGGGCACAACATCAGACCAAGACGTCCAGCG-TGCG-CACCAAGCACT-------GTCCTTGCTTCACA-CGTCATAGT-A------T----CGCTCAGACTAGCCATGGAG-GCAGACAGACATCGGCCAT-CA-GAATAATAGCAGTT---CTGTTTTTCAAAACTGAT----TGAAT--TC---CA----------GA----------T---------TT----CAT----A-AGCAACTGGCGTTGTCGTTGTAGATAACA-CGTC-CGTTGGTGAGTGGTAC---CAG--ACGCTCGTGT----T-------GTGCCAACGTCGACA-TTCGGTGGAGGT--------TGG-GTGGA----AATAACAGC----------------------TCTACAAATTGTCAAATGGAAATC--TCACCGGCGTA-CGCTTATCGA----GAAAT--A-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGAAAACGCAAGACCACAT-ATTGCCACG-T-GTAGCGCT-G----GA--ATTT--TTAG-TTCAACAGA-ATG-------TATCGATGTCTGGTCCATGTCTTGCCTTGGCCAAGCTGTTTTCCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATG---GA-ACG-ACGTCTACGCCGTCTT-ACGCAATCAG-C-C----AGTGACA-TTGGCTGA-TTTTAAGCCAGGCTTTAA-CCAACCTC-TT-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTGAATACTT----T----AGTGGCATCC-AATGAGGCGCAGTTATC-AAGCAT------ATT--AATGGTG-------------GTTACACCCCGCCAGATCACAG-CGTT-TTATATACATT-TGATT--AA-TCATGTTCGAATAagtagagttatcttcaccgacgagtccaggttcaatctacggcgaacggatgggcaaaaccgtttctatcgaaagggagaacgc
gi|4 : GA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGG--TATTCCTCGTCCTCTTTTACAGG-ACAA-AAACATTAG-ACT------TTTGCACCTG----GGGAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACT-------AGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGTGCGTAAA-CGACTGCACGAGCACAACACCAGAACAAGATGCCCAGCGGCGCG-C-CCAA-TACT-------G------CTTCA-A-CGGCATTGT-A------T----CGCT-AGACTATC-GTAG-T-GCATAC-TACATCTGCGATTTA-GAATA----CAGGA---CTG--------GGCCAATAA--TCTGT--CC--ACT----------GATGAATCCAGGT---------TT----CATTTGAATAGCAG-TGACA--GCCGATGTAGAGTGTATCGTCTCGTTGGGGAGCGGTAC---CAG-GACGCTTGT---------T---TGTGT-AACGTCAACAAGTCGGTGGTGGTAGCG-TTATGGTGAGTGGTGGAATAACAG--CACGT-G--GA---------CTCTACAAATTGTCAA-TGGAAATC--TCACTGGCGCA-CGGT-ATC-AAAACGAAAT-TA-TTCAGC-GC-TATGTG--ATACCCTT-CCT-ACAG-AGACAGCTTAATCACATCTC-TCTGCAGCAAGACACCGTAAGGCCACAT-GTTGC-ACG-T-GTAGT-CAGG----GG--CTTT--TTTG-TTCAACAGA-ATG-------T---------CG----ATGTCTTGCCTTGGCCA-GCTGTTTCCCC-AGA--TTTATCGCCGATAGAGC--ACGTCTGGGAT-GAAATG---CA-ACG-ACGTCTA---CGT-TT-ACCAAATGTG-C-C----AGTGAAATTTGGCTTC-TTT-AGGCCAGGCTTCAC-CCAAGATC-AG-ATTCTA-TAATGT--------------------TC-----AA-CATCCCTAAACATTT----T----AGTGTCAT-C-AATGAGGCGCCGTTGTC-AGGCCTGCGTGAATGCAAATGGTG-------------GACACAC--------------G-CAATATCA---AT-TT-T--TTAAAATTCAAATTCGAATccagcgtctttcagtagtgcgaaattgagcg
gi|5 : ATAAAGACGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCTGATGCACGCGGAC-GTTTTCTTGGTTAGT---------GAACA--C-----GTTGTTTAT--TG--------AAGAG----TTCGTACAC-AT-GAGTTTTA-CTGGCCAATACTGTTTGTA-GTA-GGAA------GTA-TAAAA-TGTTTGT-TTGG--ACACTATTCGTT-ACGGAA---A------------------GCAC-A--TTAGTTTTGACACAAGTTACCCTT-CTGCCATGCCACGACT--CAACGAAAA-GCAA------TGT---AATCGTGCTGTTGGGATG-CTTCAAGTTGGAA-TGACACAA---A-T--TAGCAAATCAC-TTTTG-AGTTCATT-----AG---AAT----AT-CATCCG-GTC-ATTATGGAGACGTTTC-CAAC-AACC---TGGTAACACT-CGGGA--TCGACC-ATGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------GCAGG-ACAT-CCACAATAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-------------------------AGTTTGACTGC-TCGTAGC-TTCCTGGA-C-TTCTACCTATCAGTCCGAGAACTGCAAGTAAT-CGTCTGAGCGAGC---ACATCTGACCAAACCGTCCTGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-TGTCATCGT-A------T----CGCA-AGACTAAC-GTGG-T-GTAGAC-AAC-------ATTCA-GAATA----CAGTA---CTG--------GACCAATAT--TTTGT--TC--ACT----------GA----------TGAA------TC----CATTTGGATAGCAG-TGACG--A--G-TGTAGAGTGTATCGTCGCGTTGGGGAACGGTAC---CAG-GATGCTTG--------TGT---TGTGC-AACTTTGACAGTTTGGTGGAGGTAGCG-TTAT-G-GTGGGGTGGAATTACAG--CACGT-GGAAA--G-AC-CCCTCTACAAATTATCAA-TGGAAATC--TCACCCGCGTA-CGCT-ATC-GAGATGAAAT-TA-TTCAGT-GT-CATGTG--ATACTCTT-CAT-ACAA-AAACAGCAATAGCACATCAgccagtgtctttcgagtgagctgaaataggcgttattcaacgttaaaattaatgggttatgaaatgttggaacgaatacatttgttaacagtattacaaaaaacaaaatatgttcattgttatactttattatcttttttttccatatatcaaataatgcacagtttcttttttcctctggtatatctttaatctgctttataatgcagagttttgttcattttcaaacattgcggcaacgtagaa
gi|6 : tgaaacaagtagttagaaatagaatatatactagcggaaaaagaaactgtgcattatgaaatttagtataatttttctatatctattgtttatatttataaaatctaaacaattgA-TTCC-------G------TTTCA-AACGTCATCGT-AATCGGAT----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA----CAGGA---CTG--------GGTCAATAT--TCTGT--TC--ACT----------GA----------TAAATCCAGGTT----CATTGTGATAACAA-TGGCG--GCCGTTGTAGAGTGTATCGTCGCTTTGAGGAGTTGTA--------------------------T---TGTGC-AACGTAGACAATTCTATGGAGGCAGTT-TTTTGA-TTTGGGTGGAAAAACAGC-TTG-TGG--AA--GTAC-CCTTCTAAATATTTTCAA-TGGAAATT--T
gi|6 : ttgtATACTTTT-CAC-ACTG-AGACCGAAAAATCAAATCAC-TCTGCAACAAGTCAACGCAAGACCACAT-GTTGC-ACG-T-GTAGG-CA-G----GGC-CTCT--TTTG-TTCGATAGA-ATG-------T---------CG----ATGTCTTGCCTTGTCCA-GCTGTTTCCAC-CGA--TTTCACACTAATCGAGC--ACTTCTGGAATGAAATTGAACGACACGTACATCTACGCCGT-TC-ACCAAATCAG-C-T----AGTATCA-TT-------TTC-TGGTCAGACTTTAA-CCAACACC-TGTA----A-CAACAT-----------------------CTCAAA-TATGTCTGAACACTTTAAAT----AGTGGCAT-G-AATGAGGCGCCGTTGGC-AAGCATGTGTACATGCAAATGGTG-------------GTCACAC--------------G-CACTATTA---AC-TT-TG-TT--AATTCAAATTCGAATAggctctttgatacttttcacactgagaccgaaaaatcaaatcactctgcaacaagtcaacgcaagaccacatgttgcacgtgtaggcagggcctcttttgttcgatagaatgtcgatgtcttgccttgtccagctgtttccaccgatttcacactaatcgagcacttctggaatgaaattgaacgacacgtacatctacgccgttcaccaaatcagctagtatcattttctggtcagactttaaccaacacctgtaacaacatctcaaatatgtctgaacactttaaatagtggcatgaatgaggcgccgttggcaagcatgtgtacatgcaaatggtggtcacacgcactattaactttgttaattcaaattcgaatactactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|7 : ttgtattccgtttcaaacgtcatcgtaatcggatcgctagactagcgtggtgcagacgacatctgcgattcagaatacaggactgggtcaatattctgttcactgataaatccaggttcattgtgataacaatggcggccgttgtagagtgtatcgtcgctttgaggagttgtattgtgcaacgtagacaattctatggaggcagttttttgatttgggtggaaaaacagcttgtggaagtacccttctaaatattttcaatggaaatttggctctttgT-ATCG-AGACGAGAT-TA-TTCAGC-ACATATGTG--ATACCCTT-CAT-ACAG-AGA-AACAAA-TCACATAGC-TTT-CAACAAAACAATGCAAGGTCACAT-GTTGC-ACG-T-GTAAT-CA-G----GG--CTTT--ATTG-TTCAATAGA-ATG-------T---------CG----A-GTCTTGTCTTGTCCA-GATGTTTCCCC-CGA--TTTATCGCCGATCAAAC--ATGTCTTGGATGAAAATG---AACA---ACAT----------------AAGTCAA-CGC----AGTGTCA-TTGGCTGA-TTT-CGGCCTGACTTTAATCCACCATC-TG-G----A-CAACAT--------------------TCCCACAA---ATTCCTGAGTACTT----T----AGTGGCAT-C-AATGTGACACCAATATC-AAACATGGCTAAATGCAAATGGTG-------------GTCAGACG-------------G-CGTTATTA---AC--T-TG-TT--AATTCAAGTT-GGATActactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|8 : AATATCGGATAGTACCCGA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT---------GAACA--CAT---GTT-----TATTG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-T-GG--ACACTACTCGTT-GAGGAA---A--------GCAGTCGGAAGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA-ACAA------TGT---AATCGTGCTGTTGGAATG-CTTCAAGCTGGAA-TGGCTCAATATA-TCGTAGCAAGACAC-TTTGG-AGTTCATC-----AG---AAC----AC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTAACATTCCGGGA--TCGACC-ACGTTCTGGG-CGTCCT-G-TGTGA--CGT--CGCGTCG------ACAGG--CAA-CCACATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGTCCAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGtaatggctttagattgtggctaaattgacgttattcgacattaacattaaataatttatgaatgctgtaacgaatataatttgtttattgttatttttaaattattttcttcatatattaaattaaagtaatacacattttctttttttttttttcgctagtatacatgtataatggcagccaaattttcttactctctgtttgaagtgcatgcaatgtagaa
gi|9 : ATATCGGATAGTACC-GA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT-------G-AAACA--T-----GTTTA---T--TG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATA-GGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTG--TTGG--ACACTACTCGTT-GAGGAA---AGCAGTCGGA--------AGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA---AA------CATGTAAATCGTGCTGTTGGAATG-CTTCAAGCTGGAATTGGCTCAATTAA-TCGTAGGCAGACACGTTTGG-AGTTCATC-----AG----AC----AC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTA--ATT-CGGG---TCGACC-ACGTTCTGGG-CGTCCTTG-TGTGA--GCT--CGCGTCG------ACAGG-ACAA-CCA-ATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAG-TTGACTGCTTTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGT-CAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGG-
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): ACTTTGTTGATTTAAATTCGAATACTAGTGTCTTTCGAGTGTGCTGAAATTAACGTTATTCAACGTTAACACAAATGGATTATGAAATGTTGTGACGAATAAATTAATTTTGTTTTAAAACAGCATTAAAAAGTAAAATTTGTTCATTGTTATTTTTTTTTTTTATTATTATCTTTT
Unaligned ( gi|26 ): AACAGTGCGTGTTGTATTCGTACATACTCTTGTGCGAATAAGTTGCATCTACACCTGCATTTTTAATTGCCACCAATTCAATAGAGGGGACGATATGGTCTGGGAAGAATTACAACATATG
Unaligned ( gi|27 ): AGTTTGTTGCAAAATAATTCCAAGTCCGAATACCAATGTCTTTCGAGTGTGTTGAAATTGACGATATTCGACGTTAACATTAATGGATTATGAAA
Unaligned ( gi|28 ): CATTTCAAGAATATCACGATTGGGCGAAAATTCTTTTTACGGAGGAATCTTGACAGCAGTACCGGTCGTGTTTGGGCTTCCGTCGTGCCGGAG
Alignments
lowQualScore : 1 333333333 55555555555555555555555555555 1111 222222 666666666666666666666 111111 111 111 1111 1 1 11 1111111 1111111 111 55555555555555555555555555555555555555555 11 11111111111111 11111111111 55555555555555555555555555555555555555555555555 111 111111 5555555555555555 1 1 66666666666666666666666 222 1 22 1 1 1111111111 55555555555555555555555 111111 444444444444444444444 11 111111111 2222222222222 22222222222222 111
lowQualScore : 66 5 5 2 4 66 55 6 2 222222222 1 22222222222222222222222222222 1111 4 4 0 4 0 4 4 333333 4 4 1 55 55 4 000000000000000000000 8 55 4 4 0 2 55 8 111111 555 4 4 1 4 4 3 0 4 4 000 2222 5 5 1 1 1 5 888 0 5 66 4 4 4 00 66 4444444 4 4 8 7777777 9999 3 222 55555555555555555555555555555555555555555 4 5 4 1 5 5 11 7 5 4 0 6 4 4 4 77777777777777 4 4 4 77777777777 4 8 666 4 1 8 4 2 777 2 66 66 11111111111111111111111111111111111111111111111 111 444444 5 0 66 0 0 4 5 2 888 5 1 8888888888888888 0 3 77 7 3 2 55555555555555555555555 5 77 6 5 222 55 5 1 5 4 44 4 88 2 4 5 0 88 1 0 5 0 777 77 9999999999 66 5 5 11111111111111111111111 5 5 4 66 66 7 4 9999 4 3 8 4 4 4 9999 4 8 0 3 0 4 5 4 888888 4 111111111111111111111 2 0 00 0 777777777 4 4 4 555 1 2222222222222 77777777777777 4 444 4 4 8 66
lowQualScore : .. . . . . .. .. . . ......... . ............................. .... . . . . . . . ...... . . . .. .. . ..................... . .. . . . . .. . ...... ... . . . . . . . . . ... .... . . . . . . ... . . .. . . . .. .. ....... . . . ....... .... . ... ......................................... . . . . . . .. . . . . . . . . .............. . . . ........... . . ... . . . . . ... . .. .. ............................................... ... ...... . . .. . . . . . ... . . ................ . . .. . . . ....................... . .. . . ... .. . . . . .. . .. . . . . .. . . . . ... .. .......... .. . . ....................... . . . .. .. . . .... . . . . . . .... . . . . . . . . ...... . ..................... . . .. . ......... . . . ... . ............. .............. . ... . . . ..
lowQualScore : 99 0 0 5 0 99 11 5 5 444444444 8 11111111111111111111111111111 4444 0 0 8 0 8 0 0 000000 0 0 0 33 55 0 666666666666666666666 0 55 7 0 8 2 55 0 555555 000 0 0 6 9 0 2 8 0 0 000 1111 7 7 4 4 4 7 888 2 0 11 4 4 4 66 11 7777777 4 4 9 3333333 4444 6 222 00000000000000000000000000000000000000000 4 7 4 9 0 0 00 6 0 5 1 5 4 4 0 77777777777777 4 4 4 77777777777 0 0 444 4 7 9 4 9 888 7 11 11 99999999999999999999999999999999999999999999999 555 444444 0 9 99 2 4 2 1 5 888 0 4 8888888888888888 0 6 33 8 9 2 22222222222222222222222 7 99 7 7 111 99 7 4 7 3 77 4 00 1 4 4 0 99 4 2 0 0 111 22 0000000000 99 0 0 99999999999999999999999 0 0 4 11 11 3 8 4444 4 7 9 4 4 4 4444 4 9 1 7 8 4 2 4 222222 4 888888888888888888888 3 3 88 7 777777777 4 4 4 999 1 0000000000000 55555555555555 0 000 0 0 9 11
consensus : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACT----------GA----------T---------TT----CATTT-GGAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
Reference ( family-632 ) : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACT----------GA----------T---------TT----CATTT-GGAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|1 : ATAAAGGTGA--T-GTTTTTGAACAACATCGAATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTTATGGTTAGTCAACTTGGTGAACA--C-----ATT-----T--TG--------AAGTGCATATTCGTATGC-AC-GAGTTTTA-CTGGCCAATATTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTATGT-TTGG--ACACAATTCATT-TGGGA-------------T--------AGCAC-T--TTAGTTTTGACAAAAGTTGTCCTT-ATGTCATGCCACGACT--CGGCGAAAA-CCAA------CGT---AATCTTGCTGTTGGGATG-CCTCAGGCTGGAA-TGGCACAAAATA-TCGTTGCAAGACAC-TTTGG-AGTTCATTGG---AA----GAC-CATCCA-GTC-ATTGTGGAGACGTTTC-TAAC-AATCAGCTGGTAACACT-CGGGA--TCGACC-ACGTTTTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------AAAGG-ACAA-CCACATTAG-ACG------TGTGCACCTGCATGAGAAAT---CTTTT----------------------CC-----------------AGACAGTCAGTTTAACTGC-TCGTAGCATTCTTGGA-C-TTCGACCAATCAGTCCAAGGACTGTGTGTAAT-TGTCTGCGTAAGCACAACGTTAGACCACGACGTCCAGCGGTGCG-C-TCAA-TACT-------G------CTTCA-G-CGTCATCGT-A------T----TGTT-GGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGAA---CTGGACCAATATTCAG--T--TC------ATT----------GA----------T---------TT----CATTT--CAT------AGCAG-TGACA--GCCGTTGTAGAGTGTATCGTCGCCTTGGGGAGCGATAC---CAG-GACGCTTTTGTTAAATTGTACATGTGC-AACGTCAACAATTCGGTGGAGGTAGCG-TTACGG-GTGAGCTGGAAT-ACAGC-CAC-T-G--AATGA--G-A-CCTTCTACAAATTGTC-A-TGGAAATCTATCATCGGCGTA-C-CT-CTCGGAGACGAAAT-TACTTCATC-GC-CATGTGATATACCCTTACAT-ACAG-AAAC-GCAAAATCAC-TCAC-TCTGCAGCAAGACAA-ACAAGGCCACAT-GTTGC-ACG-TCGTA---------------TTTTAATTTGTTTCAACAGA-A-G-------T--------CCG----ATGTCTTGCATTGGCC-A-GCCCCCCCCCCTCCA--TTTATCG-CGATCGAGCTGACGTTTGGGATAAAAATGGA----AAG-TC--CTACGCCGT-TTAACCAAA-CAGAA-C----AGTGACA-TTGCTTGA-TTTAGA-CAGGC-TTAA-CCAACA-C-TG-G----A-CAACGTNNNNNNNNNNNNNNNNNNNNNNNNNCAAG-CATTTTTGAACACTT----T----AGATGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGTACGAATACAAATGGCG-------------GTCACAC--------------G-CGTAATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|10 : ATAAAGGTGG--T-GTTTTTTAACA-TATCGGATAGTTCCCGA-CTCAAATGTGCA--GAC-----ACAT-----GTT------GT--------------TTA----T--TA--------ATGTG----TTCGTACGC-AC-GAGTGTTA-CTGGCCAATACTGTTTGGC-GTA-AAAC------TTG-TAAAA------------G--ACACTATTCGTT-AAGGAA---G--------A----------CAC-T--TCAGCGTATACAAAATGTACCCTC-CTGTCATGTCATGGTT--AAGAGAAAA-CCAA------AGT---AATTGTGCTGTTGAGATT-CTTTAAGTTGGAA-TGGCACAAACGA-TAGTAACAAGGCAC-TTTGG-AGTCCATCGA---AA----CAC-CATCTA-GTC-ATTATGGAGACGTTTA-CAAC-AATC---TGGCAACACT-CAGGA--TCAACA-ACATTCTGGG-TGTCCTCG-TGTGA--CGC--CGAGTCG------ACATG-ACAG-CCACATTAG-ACT------TTTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGA-AGACAGTTT---------GTAGTATT-TTGGA-G-TTCGACCAATTAGTCCAAAAACAGTGCGTAAT-CGTCTGTGCGAGCACAACATCAGACGAAGACGTCCAGCGGTGCG-T-CCAA-CACT-------G------CTTC
gi|11 : atattccataccctctaaacaatagACCCTT-TATCGCTGCAAATGGCGGAAT---------TTTCCAACAGGATAATGCCCGCCCACAC-GTTGG-AAG-----AGC-CA-GCAGAGA--CTTT--CTTG-C-CAACAACCACA-------T--------C-G----ACATCTTTCAATGGCC-A-GCACTTTCGCC-CGA--TTTATCGCCAATCGAGC--ACCTCTg
gi|12 : attcctggattgcgtcgatcagtcgtcgaacagttcaacgacgtttgtcggctgcaggtctacgtgcacgacgcccataaaaaggacctatgctgacccaaacagaacgacttcaatgggctcgacgttacttgagatggaagcttgcagactggaatcacgttctgtttagtgatgaatcacgcttcatgctgcgccgagtggatggcataacatgtgtgtaccgtagacacggtgaacgcttctctgatggatgtgtgctaggccatgaccgctttggaggcggaagtgtaatgatgtggggcggaataagtggtaatcgacgaacagatattgtaccgatcattgggacattaaatacacaacgataccgtaatgaaatccttgcacaacaattccgTGGAGGTGGCC-TTATGGTGTGGGGTGGAATAACAGCACGC-G-G--A---A--GGACCCCTCTACAAATTGTCAA-CGGAAATC--TCACCGGCCTA-CGCT-ATCGAC-ACAAAAT-TA-TTCAGC-GC-CATGTG--ATACCCTT-CAT-ACAA-AGACAGCAAAATAGCATCAC-TCTGCAGCAAGACAACGCAAGGCCATAT-GTTGC-ACG-T-GTAGT-CA-G----GGA-CTTT--TTTG-TTCAACAGA-CTG-------T---------CG----ATGCCTTGGCTTGGCC-A-GCTGTTTCTCC-CGACTTTTATCGCCGATCGAGC--ACGCCTGGGATG-AAATGGA----ACG-ACTTCTACGCCGT-TT-TCCAAATCAG-C-T----AGTGAAA-TTGGCTGG-TTTAGGCCAGACTTTAA-CCAACATC-TG-GA---A-CAACA---------------------TCCCTCGAG-CATTTCTTAACACTTAC--TTGTAAGTGGCAT-C-AATGAAGCGCCGTTGTC-AAACATGCGTGAATGCCAATGGTG-------------GTCAAAC--------------G-CATTATTA---AC-TT-
gi|13 : ------GTGAACAAAT-----GTT-----TA-TGG-------AAGTG----TTTGTACAC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGAAGTA-AGAA------GTG-GAAAA-GGGTTGC-TTGGATACACC-TTCGTT-AAGGAA---------------------AGCAC-TAATTAG-TTTGACAAAATCTACCCTT-CTGTCATGCCATGACT--CTGCGAAAA-CCAACGTATTCGT---AATCGT-CTGTTGGGA-G-CTTTAAGCTAGAA-TGGCACAAAATA-TCTTAGCAAGACAC-TCTGG-AGCT
gi|13 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcaC---TGGTAATACC-TGGGA--TTGACC-ACTTTTTGGG-CGTCCTCATTTTGA--CGT--CACATTA------ACAGGAACAA-CT-CATTAG-ACTGTGCAATGTGCACCTG----AGAATT---CATTTG---------------------CC-----------------TGACAAC-AGTTTGACTGC-TCTTAGCAggtaatacctgggattgaccactttttgggcgtcctcattttgacgtcacattaacaggaacaactcattagactgtgcaatgtgcacctgagaattcatttgcctgacaacagtttgactgctcttagca
gi|14 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcagtgaacaaatgtttatggaagtgtttgtacacacgagttttactggccaatactgtttggaagtaagaagtggaaaagggttgcttggatacaccttcgttaaggaaagcactaattagtttgacaaaatctacccttctgtcatgccatgactctgcgaaaaccaacgtattcgtaatcgtctgttgggagctttaagctagaatggcacaaaatatcttagcaagacactctggagATAAGGGTGA--T-GTTTTT-AACTATATCG-ATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTAACTGGCCAATACTGTTTG-A-GTACAGAA------GTG-TAAA--GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATGGTTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGA-AC-TTTGG-AGTTCACCA
gi|15 : gtatactaacgaaaaaaagaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaaatcgATAAGGGTGA--T-GTTTTT-AACTATATCGGATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTA-CTGGCCAATACTGTTTTGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATG-TTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGACAC-TTTGG-AGTTCACCatttagaaaacagcca
gi|16 : tatactaacgaaaaaaagaaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaatcgTGTTTCCCC-CGA--TTTATCGCCGATCAAGC--ACATTTAGGATGAAA-TGGA----ACG-ACGTCTGCGCAGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCTACA-----------------------------------------------------TCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCTGTTGTC-AAGCATTCGTGAATGCAAATGGTG-------------GTCATAC--------------G-CTTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|17 : gGAT-AAAATGGA----ACG-ACATCTACGCCGT-TT-ACCAAATCAG-C-CTGCCAGTGATA-TTGGCGGA-TT-------------AA-CTAACACG-TG-G----AACAACAT---------------------CCATCAAG-C------------------C----AGTGGCAT-C-AATGATGCGCTGTTTTC-AAACATGCGTGAATGCAATTGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TT-TA--AATTTAAGTTTGAATAccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|18 : -C-CCGA-T-CA-------G------CTCTG-G-CGTCCCCGTGA------TGCGATGCG-AAATTAGC-TTGG-T-GTAAGA-GGCATCGTCGTTTCAAGAA----AAGA---TTGGACGGATATTCTA--TATTCGA----AC-----------GA----------G---------TCGAAACATCT-CGAC------AGCAT-TGAGG--GTCGTGTTTGCGCTTACCGTTGTTCCGAAGAACGTTACATTCAATGACA-TC-TGT------GT---TATTC-AGCGCCACCAATTCGTCGGAAGGAGCGCTTATGGTCTGCTGTGGAATTACAACACAT-G-G--A---AG-G-ACCCtcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|19 : ctgctatctgtCT-AGGCTAGC-GTGG-T-GCAGAG-GTCATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACTGATGAATCCAGA----------T---------CT----CATTT-GGAT------AGCAG-TGAAG--GCTGTTGTAGAGCGTATCGTTTGGTTGGGGAGCGGTGC---TAG-GATGTTTG--------TGT---TGTGC-AACGTCGATAATTCACTGGAGGTAGCA-TAATGGCGTGGGGTGGAATAACAG--CACGT-G--A---AAGG-ACTCCTC
gi|2 : GAACA--CATGTTGTT-----TATTG--------AAGTA----TTCGT-CGCCAC-GAGTT-----------A-ACTGGTTGGA-GTA-AGAATTCGAAGTG-TAAAAAGGATT-C-TTGG--ACACTATTCGTT-AAGGAA---A--------TCACTTT--AGCATGT--TTAGTTTTGACAAAAT--ACCCTT-CTGTCATGCCACGACTTCCAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TG-CATAACATAATCATAGCAAAAC----TTGGCAGTTCATCAG---AAGGAACACGCATCCAAGTCGATTACGGAGACGTTTCTCAAC-AATC---TG-TAACAAT-CGAAA--TCGACCCACATTCTGGGGCGTCCTCG-TGTGAATCAT--CACGTCA------ACAGG-ACAAACCACATTAGGAC--------GTGCACCCG----AGAAATATATTTTT----------------------CCCCCCCCCCCCCCCCCCTAGGCAGCAAGTTT-ACTGC-TCGTAATATTCCTGGAAC-TTGGACCAACCAATCCAAGAACT-CG-GTAATTCGTCTGT-TGGGCACAACATCAGACCA-GACGTCCAGCG-TGCGTC-CCAA-CACTAGTCCTTG------CTTCA-A--GTCATAGT-AA-----T----CGCT-AGACTAGCCATGG-GAGCAGAC-GACATCGGCCATTCA-GAATA-TAGCAGTTCTGTTCAAACATGATGAAT--CC------A------------GA----------T---------TT----CATA--GAAT------GGC-G-TG-----TCCGTTGTAGATAACA-CGTCGCGTTGGGGAGTGGTAC---CAG-GACGCTCGTGT----T-------GTGCCAACGTCGAACATTCGGTGGAGGT-------------TGGG-TGGAATAACAGC-T---------------------CT-TACAAATTGT-AA-TGGAAATC--TCACCGGCGTAACGCT-ATCGA----GAAATACA-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGA-AACGCAAGACCACATAGTTGCCACGGT-GTAGC-CA-T----GGAATTTT--TTTG-TTCAACAGA-ATGATCGATGT--------CTGGTCCATGTCTTGCCTTGGCCAA-GCTGTTT-TCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATGG-----ACG-ACGTCTACGCCGTCTT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAG--CTTAA-CCAACCTCTTG-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTAATAACTT----T----AGTGGCAT-CAAATGAGGCGCAGTTATCAAAGCAT------ATT--AATGGTGTTACACCCCGCCAGTCACAC--------------GACGTTATTATATAC-TTATGATT--AATTCATGTTCGAATA
gi|20 : TG-------------GTTACAT--------------G-CGATATTA---AC-TT-TG-TT--AATTCAAGTTCAAATAtccagcgtctttcaagtagtgctcgaaattgaggtt
gi|22 : aATAAAGGTGC--TTGTTTTT-AACAATATC-GATAGTATCCGATCTCAGATttattgtctttcgagtgtgctgaaattgacattaatggattatgaaatgttgtaacgaatacgtctgttgaaagtatcacaaaaataaaatttgttcattaagttttatataatttcatatataaaaaacacacggtttctttttctgctagtatatttag
gi|23 : aagaaaatattctaagtataactggcggaaaaagaaactgctgcattagaaatttagtatatttttccccttaatttattgtttatatttatagactattgtttatatttataatcttaacaatcgATAAGG-TGACTT-GTTTT--AACAATATC-GATAGTATCCGA-TT
gi|24 : ataactggcggaaaaaagaaacttgctgcatagaaatttagtataatttccccttaatttattgtttatatttatagactattgttatttatttaataatcataaacaatcgATAAGGGTGA--T-GTTTCTGAATAACATTTGATAGTACCCGA-CCGAGATGTACG--GACATTTTTGATGGTTA---------GTGAACA--C-----A----------TG--------AAGTG----T
gi|25 : aaactttttttgtccagtatatatacaaaatataaacattcgCAGAC-GTCATCTGAGATTCACGCATG-C-GGA---CTGGAGTAGAGTTATC--T--TC------ACC----------GA----------
gi|3 : tgggcGAACA--C-----ATG-----T--TGTTTATTGCAAGTAA---TTCGTACGC-CCAGAGTT-----------A-ACTGTT-GGA-GTA-AGAATTCGAAGTGGTAAAA-GGATTCTGTTGG--ACACTATTCGTTTAAGGAATCAA--------CTTT-----AGCATGT--TTAGTTTTGACAAAAT--ACCCTTTCTGTCATGCCACG-CC--CAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGG-ATG-CTTCAAGCTGGAA-TG-CATAACATA-TCATAGCAAAAC----TTGG-AGTTCATCAAGGAAA----CAC-CACCAA-GTCGATTACGGAGACGTTTCGCAACCAATC---TGGTAACAAT-CAGAAAATCGACC-ACATTCTGGG-C-TCCTCG-TGTGAT-CAT--CACGTC-------ACAGG-ACAA-CCACATTAGGAC--------GTGCACC-G----AGAAATA--TATTTTTCCCCCCCCCCCCCCCCCCCCCC-----------------AGGCAGCAAGTTTTACTGC-TCGTAAT-TTCCTGGA-CCTTGGACCAACCAATCCAAGAACTGCG--TATT-CGTCTGT-TGGGCACAACATCAGACCAAGACGTCCAGCG-TGCG-CACCAAGCACT-------GTCCTTGCTTCACA-CGTCATAGT-A------T----CGCTCAGACTAGCCATGGAG-GCAGACAGACATCGGCCAT-CA-GAATAATAG-----------CAGT--TCTG--T--TTTTCAAAACT----------GA----------T---------TG----AATTCCAGATTTCATAAGCAACTGGCGTTGTCGTTGTAGATAACA-CGTC-CGTTGGTGAGTGGTAC---CAG--ACGCTCGTGT----T-------GTGCCAACGTCGACA-TTCGGTGGAGGT--------TGG-GTGGA----AATAACAGC------------------------TCTACAAATTGTCAAATGGAAATC--TCACCGGCGTA-CGCTTATCGA----GAAAT--A-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGAAAACGCAAGACCACAT-ATTGCCACG-T-GTAGCGCT-G----GA--ATTT--TTAG-TTCAACAGA-ATG-------TATCGATGTCTGGTCCATGTCTTGCCTTGGCC-AAGCTGTTTTCCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATGAAA-TGGA----ACG-ACGTCTACGCCGTCTT-ACGCAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAGGCTTTAA-CCAACCTC-TT-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTGAATACTT----T----AGTGGCATCC-AATGAGGCGCAGTTATC-AAGCAT------ATT--AATGGTG-------------GTTACACCCCGCCAGATCACAG-CGTT-TTATATACATT-TGATT--AA-TCATGTTCGAATAcgagtccaggttcaatctacggcgaacggatgggcaaaaccgtttctatcgaaagggagaacgc
gi|4 : GA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGG--TATTCCTCGTCCTCTTTTACAGG-ACAA-AAACATTAG-ACT------TTTGCACCTG----GGGAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACT-------AGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGTGCGTAAA-CGACTGCACGAGCACAACACCAGAACAAGATGCCCAGCGGCGCG-C-CCAA-TACT-------G------CTTCA-A-CGGCATTGT-A------T----CGCT-AGACTATC-GTAG-T-GCATAC-TACATCTGCGATTTA-GAATA-CAGGA---CTGGGCCAATAATCTG--T--CC------ACT----------GATGAATCCAGGT---------TT----CATTT-GAAT------AGCAG-TGACA--GCCGATGTAGAGTGTATCGTCTCGTTGGGGAGCGGTAC---CAG-GACGCTTGT---------T---TGTGT-AACGTCAACAAGTCGGTGGTGGTAGCG-TTATGGTGAGTGGTGGAATAACAG--CACGT-G--G---A--------CTCTACAAATTGTCAA-TGGAAATC--TCACTGGCGCA-CGGT-ATC-AAAACGAAAT-TA-TTCAGC-GC-TATGTG--ATACCCTT-CCT-ACAG-AGACAGCTTAATCACATCTC-TCTGCAGCAAGACACCGTAAGGCCACAT-GTTGC-ACG-T-GTAGT-CAGG----GG--CTTT--TTTG-TTCAACAGA-ATG-------T---------CG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-AGA--TTTATCGCCGATAGAGC--ACGTCTGGGATG-AAATGCA----ACG-ACGTCTA---CGT-TT-ACCAAATGTG-C-C----AGTGAAATTTGGCTTC-TTTAGGCCAGGCTTCAC-CCAAGATC-AG-ATTCTA-TAATGT--------------------TC-----AA-CATCCCTAAACATTT----T----AGTGTCAT-C-AATGAGGCGCCGTTGTC-AGGCCTGCGTGAATGCAAATGGTG-------------GACACAC--------------G-CAATATCA---AT-TT-T--TTAAAATTCAAATTCGAATccagcgtctttcagtagtgcgaaattgagcg
gi|5 : ATAAAGACGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCTGATGCACGCGGAC-GTTTTCTTGGTTAGT---------GAACA--C-----GTTGTTTAT--TG--------AAGAG----TTCGTACAC-AT-GAGTTTTA-CTGGCCAATACTGTTTGTA-GTA-GGAA------GTA-TAAAA-TGTTTGT-TTGG--ACACTATTCGTT-ACGGAA---A------------------GCAC-A--TTAGTTTTGACACAAGTTACCCTT-CTGCCATGCCACGACT--CAACGAAAA-GCAA------TGT---AATCGTGCTGTTGGGATG-CTTCAAGTTGGAA-TGACACAA---A-T--TAGCAAATCAC-TTTTG-AGTTCATTAG---AA----TAT-CATCCG-GTC-ATTATGGAGACGTTTC-CAAC-AACC---TGGTAACACT-CGGGA--TCGACC-ATGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------GCAGG-ACAT-CCACAATAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-------------------------AGTTTGACTGC-TCGTAGC-TTCCTGGA-C-TTCTACCTATCAGTCCGAGAACTGCAAGTAAT-CGTCTGAGCGAGC---ACATCTGACCAAACCGTCCTGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-TGTCATCGT-A------T----CGCA-AGACTAAC-GTGG-T-GTAGAC-AAC-------ATTCA-GAATA-CAGTA---CTGGACCAATATTTTG--T--TC------ACT----------GA----------TGAA------TC----CATTT-GGAT------AGCAG-TGACG--A--G-TGTAGAGTGTATCGTCGCGTTGGGGAACGGTAC---CAG-GATGCTTG--------TGT---TGTGC-AACTTTGACAGTTTGGTGGAGGTAGCG-TTAT-G-GTGGGGTGGAATTACAG--CACGT-GGAA---A--G-ACCCCTCTACAAATTATCAA-TGGAAATC--TCACCCGCGTA-CGCT-ATCG-AGATGAAAT-TA-TTCAGT-GT-CATGTG--ATACTCTT-CAT-ACAA-AAACAGCAATAGCACATCAgccagtgtctttcgagtgagctgaaataggcgttattcaacgttaaaattaatgggttatgaaatgttggaacgaatacatttgttaacagtattacaaaaaacaaaatatgttcattgttatactttattatcttttttttccatatatcaaataatgcacagtttcttttttcctctggtatatctttaatctgctttataatgcagagttttgttcattttcaaacattgcggcaacgtagaa
gi|6 : tgaaacaagtagttagaaatagaatatatactagcggaaaaagaaactgtgcattatgaaatttagtataatttttctatatctattgtttatatttataaaatctaaacaattgA-TTCC-------G------TTTCA-AACGTCATCGT-AATCGGAT----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGTCAATATTCTG--T--TC------ACT----------GA----------TAAATCCAGGTT----CATTG-TGAT------AACAA-TGGCG--GCCGTTGTAGAGTGTATCGTCGCTTTGAGGAGTTGTA--------------------------T---TGTGC-AACGTAGACAATTCTATGGAGGCAGTT-TTTTGA-TTTGGGTGGAAAAACAGC-TTG-TGG--A---A--GTACCCTTCTAAATATTTTCAA-TGGAAATT--T
gi|6 : ttgtATACTTTT-CAC-ACTG-AGACCGAAAAATCAAATCAC-TCTGCAACAAGTCAACGCAAGACCACAT-GTTGC-ACG-T-GTAGG-CA-G----GGC-CTCT--TTTG-TTCGATAGA-ATG-------T---------CG----ATGTCTTGCCTTGTCC-A-GCTGTTTCCAC-CGA--TTTCACACTAATCGAGC--ACTTCTGGAATGAAATTGAACGACACGTACATCTACGCCGT-TC-ACCAAATCAG-C-T----AGTATCA-TT-------TTCTGGTCAGACTTTAA-CCAACACC-TGTA----A-CAACAT-----------------------CTCAAA-TATGTCTGAACACTTTAAAT----AGTGGCAT-G-AATGAGGCGCCGTTGGC-AAGCATGTGTACATGCAAATGGTG-------------GTCACAC--------------G-CACTATTA---AC-TT-TG-TT--AATTCAAATTCGAATAggctctttgatacttttcacactgagaccgaaaaatcaaatcactctgcaacaagtcaacgcaagaccacatgttgcacgtgtaggcagggcctcttttgttcgatagaatgtcgatgtcttgccttgtccagctgtttccaccgatttcacactaatcgagcacttctggaatgaaattgaacgacacgtacatctacgccgttcaccaaatcagctagtatcattttctggtcagactttaaccaacacctgtaacaacatctcaaatatgtctgaacactttaaatagtggcatgaatgaggcgccgttggcaagcatgtgtacatgcaaatggtggtcacacgcactattaactttgttaattcaaattcgaatactactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|7 : ttgtattccgtttcaaacgtcatcgtaatcggatcgctagactagcgtggtgcagacgacatctgcgattcagaatacaggactgggtcaatattctgttcactgataaatccaggttcattgtgataacaatggcggccgttgtagagtgtatcgtcgctttgaggagttgtattgtgcaacgtagacaattctatggaggcagttttttgatttgggtggaaaaacagcttgtggaagtacccttctaaatattttcaatggaaatttggctctttgT-ATCGA-GACGAGAT-TA-TTCAGC-ACATATGTG--ATACCCTT-CAT-ACAG-AGA-AACAAA-TCACATAGC-TTT-CAACAAAACAATGCAAGGTCACAT-GTTGC-ACG-T-GTAAT-CA-G----GG--CTTT--ATTG-TTCAATAGA-ATG-------T---------CG----A-GTCTTGTCTTGTCC-A-GATGTTTCCCC-CGA--TTTATCGCCGATCAAAC--ATGTCTTGGATGAAAAT-GA----ACA-ACAT----------------AAGTCAA-CGC----AGTGTCA-TTGGCTGA-TTTCGGCCTGACTTTAATCCACCATC-TG-G----A-CAACAT--------------------TCCCACAA---ATTCCTGAGTACTT----T----AGTGGCAT-C-AATGTGACACCAATATC-AAACATGGCTAAATGCAAATGGTG-------------GTCAGACG-------------G-CGTTATTA---AC--T-TG-TT--AATTCAAGTT-GGATActactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|8 : AATATCGGATAGTACCCGA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT---------GAACA--CAT---GTT-----TATTG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-T-GG--ACACTACTCGTT-GAGGAA---A--------GCAGTCGGAAGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA-ACAA------TGT---AATCGTGCTGTTGGAATG-CTTCAAGCTGGAA-TGGCTCAATATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTAACATTCCGGGA--TCGACC-ACGTTCTGGG-CGTCCT-G-TGTGA--CGT--CGCGTCG------ACAGG--CAA-CCACATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGTCCAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGtaatggctttagattgtggctaaattgacgttattcgacattaacattaaataatttatgaatgctgtaacgaatataatttgtttattgttatttttaaattattttcttcatatattaaattaaagtaatacacattttctttttttttttttcgctagtatacatgtataatggcagccaaattttcttactctctgtttgaagtgcatgcaatgtagaa
gi|9 : ATATCGGATAGTACC-GA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAG-T------G-AAACA--T-----GTTTA---T--TG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATA-GGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTG--TTGG--ACACTACTCGTT-GAGGAA---AGCAGTCGGA--------AGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA---AA------CATGTAAATCGTGCTGTTGGAATG-CTTCAAGCTGGAATTGGCTCAATTAA-TCGTAGGCAGACACGTTTGG-AGTTCATCAG----A----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTA--ATT-CGGG---TCGACC-ACGTTCTGGG-CGTCCTTG-TGTGA--GCT--CGCGTCG------ACAGG-ACAA-CCA-ATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAG-TTGACTGCTTTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGT-CAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGG-
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): ACTTTGTTGATTTAAATTCGAATACTAGTGTCTTTCGAGTGTGCTGAAATTAACGTTATTCAACGTTAACACAAATGGATTATGAAATGTTGTGACGAATAAATTAATTTTGTTTTAAAACAGCATTAAAAAGTAAAATTTGTTCATTGTTATTTTTTTTTTTTATTATTATCTTTT
Unaligned ( gi|26 ): AACAGTGCGTGTTGTATTCGTACATACTCTTGTGCGAATAAGTTGCATCTACACCTGCATTTTTAATTGCCACCAATTCAATAGAGGGGACGATATGGTCTGGGAAGAATTACAACATATG
Unaligned ( gi|27 ): AGTTTGTTGCAAAATAATTCCAAGTCCGAATACCAATGTCTTTCGAGTGTGTTGAAATTGACGATATTCGACGTTAACATTAATGGATTATGAAA
Unaligned ( gi|28 ): CATTTCAAGAATATCACGATTGGGCGAAAATTCTTTTTACGGAGGAATCTTGACAGCAGTACCGGTCGTGTTTGGGCTTCCGTCGTGCCGGAG
Alignments
lowQualScore : 1 333333333 55555555555555555555555555555 1111 222222 666666666666666666666 111111 111 111 1111 1 1 11 1111111 1111111 111 55555555555555555555555555555555555555555 11 11111111111111 11111111111 55555555555555555555555555555555555555555555555 111 111111 5555555555555555 1 1 66666666666666666666666 222 1 22 1 1 1111111111 55555555555555555555555 111111 444444444444444444444 11 111111111 2222222222222 22222222222222 111
lowQualScore : 66 5 5 2 4 66 55 6 2 222222222 1 22222222222222222222222222222 1111 4 4 0 4 0 4 4 333333 4 4 1 55 55 4 000000000000000000000 8 55 4 4 0 2 55 8 111111 555 4 4 1 4 4 3 0 4 4 000 2222 5 5 1 1 1 5 888 0 5 66 4 4 4 00 66 4444444 4 4 8 7777777 9999 3 222 55555555555555555555555555555555555555555 4 5 4 1 5 5 11 7 5 4 0 6 4 4 4 77777777777777 4 4 4 77777777777 4 8 666 4 1 8 4 2 777 2 66 66 11111111111111111111111111111111111111111111111 111 444444 5 0 66 0 0 4 5 2 888 5 1 8888888888888888 0 3 77 7 3 2 55555555555555555555555 5 77 6 5 222 55 5 1 5 4 44 4 88 2 4 5 0 88 1 0 5 0 777 77 9999999999 66 5 5 11111111111111111111111 5 5 4 66 66 7 4 9999 4 3 8 4 4 4 9999 4 8 0 3 0 4 5 4 888888 4 111111111111111111111 2 0 00 0 777777777 4 4 4 555 1 2222222222222 77777777777777 4 444 4 4 8 66
lowQualScore : .. . . . . .. .. . . ......... . ............................. .... . . . . . . . ...... . . . .. .. . ..................... . .. . . . . .. . ...... ... . . . . . . . . . ... .... . . . . . . ... . . .. . . . .. .. ....... . . . ....... .... . ... ......................................... . . . . . . .. . . . . . . . . .............. . . . ........... . . ... . . . . . ... . .. .. ............................................... ... ...... . . .. . . . . . ... . . ................ . . .. . . . ....................... . .. . . ... .. . . . . .. . .. . . . . .. . . . . ... .. .......... .. . . ....................... . . . .. .. . . .... . . . . . . .... . . . . . . . . ...... . ..................... . . .. . ......... . . . ... . ............. .............. . ... . . . ..
lowQualScore : 99 0 0 5 0 99 11 5 5 444444444 8 11111111111111111111111111111 4444 0 0 8 0 8 0 0 000000 0 0 0 33 55 0 666666666666666666666 0 55 7 0 8 2 55 0 555555 000 0 0 6 9 0 2 8 0 0 000 1111 7 7 4 4 4 7 888 2 0 11 4 4 4 66 11 7777777 4 4 9 3333333 4444 6 222 00000000000000000000000000000000000000000 4 7 4 9 0 0 00 6 0 5 1 5 4 4 0 77777777777777 4 4 4 77777777777 0 0 444 4 7 9 4 9 888 7 11 11 99999999999999999999999999999999999999999999999 555 444444 0 9 99 2 4 2 1 5 888 0 4 8888888888888888 0 6 33 8 9 2 22222222222222222222222 7 99 7 7 111 99 7 4 7 3 77 4 00 1 4 4 0 99 4 2 0 0 111 22 0000000000 99 0 0 99999999999999999999999 0 0 4 11 11 3 8 4444 4 7 9 4 4 4 4444 4 9 1 7 8 4 2 4 222222 4 888888888888888888888 3 3 88 7 777777777 4 4 4 999 1 0000000000000 55555555555555 0 000 0 0 9 11
consensus : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACT----------GA----------T---------TT----CATTT-GGAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
Reference ( family-632 ) : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACT----------GA----------T---------TT----CATTT-GGAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|1 : ATAAAGGTGA--T-GTTTTTGAACAACATCGAATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTTATGGTTAGTCAACTTGGTGAACA--C-----ATT-----T--TG--------AAGTGCATATTCGTATGC-AC-GAGTTTTA-CTGGCCAATATTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTATGT-TTGG--ACACAATTCATT-TGGGA-------------T--------AGCAC-T--TTAGTTTTGACAAAAGTTGTCCTT-ATGTCATGCCACGACT--CGGCGAAAA-CCAA------CGT---AATCTTGCTGTTGGGATG-CCTCAGGCTGGAA-TGGCACAAAATA-TCGTTGCAAGACAC-TTTGG-AGTTCATTGG---AA----GAC-CATCCA-GTC-ATTGTGGAGACGTTTC-TAAC-AATCAGCTGGTAACACT-CGGGA--TCGACC-ACGTTTTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------AAAGG-ACAA-CCACATTAG-ACG------TGTGCACCTGCATGAGAAAT---CTTTT----------------------CC-----------------AGACAGTCAGTTTAACTGC-TCGTAGCATTCTTGGA-C-TTCGACCAATCAGTCCAAGGACTGTGTGTAAT-TGTCTGCGTAAGCACAACGTTAGACCACGACGTCCAGCGGTGCG-C-TCAA-TACT-------G------CTTCA-G-CGTCATCGT-A------T----TGTT-GGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGAA---CTGGACCAATATTCAG--T--TC------ATT----------GA----------T---------TT----CATTT--CAT------AGCAG-TGACA--GCCGTTGTAGAGTGTATCGTCGCCTTGGGGAGCGATAC---CAG-GACGCTTTTGTTAAATTGTACATGTGC-AACGTCAACAATTCGGTGGAGGTAGCG-TTACGG-GTGAGCTGGAAT-ACAGC-CAC-T-G--AATGA--G-A-CCTTCTACAAATTGTC-A-TGGAAATCTATCATCGGCGTA-C-CT-CTCGGAGACGAAAT-TACTTCATC-GC-CATGTGATATACCCTTACAT-ACAG-AAAC-GCAAAATCAC-TCAC-TCTGCAGCAAGACAA-ACAAGGCCACAT-GTTGC-ACG-TCGTA---------------TTTTAATTTGTTTCAACAGA-A-G-------T--------CCG----ATGTCTTGCATTGGCC-A-GCCCCCCCCCCTCCA--TTTATCG-CGATCGAGCTGACGTTTGGGATAAAAATGGA----AAG-TC--CTACGCCGT-TTAACCAAA-CAGAA-C----AGTGACA-TTGCTTGA-TTTAGA-CAGGC-TTAA-CCAACA-C-TG-G----A-CAACGTNNNNNNNNNNNNNNNNNNNNNNNNNCAAG-CATTTTTGAACACTT----T----AGATGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGTACGAATACAAATGGCG-------------GTCACAC--------------G-CGTAATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|10 : ATAAAGGTGG--T-GTTTTTTAACA-TATCGGATAGTTCCCGA-CTCAAATGTGCA--GAC-----ACAT-----GTT------GT--------------TTA----T--TA--------ATGTG----TTCGTACGC-AC-GAGTGTTA-CTGGCCAATACTGTTTGGC-GTA-AAAC------TTG-TAAAA------------G--ACACTATTCGTT-AAGGAA---G--------A----------CAC-T--TCAGCGTATACAAAATGTACCCTC-CTGTCATGTCATGGTT--AAGAGAAAA-CCAA------AGT---AATTGTGCTGTTGAGATT-CTTTAAGTTGGAA-TGGCACAAACGA-TAGTAACAAGGCAC-TTTGG-AGTCCATCGA---AA----CAC-CATCTA-GTC-ATTATGGAGACGTTTA-CAAC-AATC---TGGCAACACT-CAGGA--TCAACA-ACATTCTGGG-TGTCCTCG-TGTGA--CGC--CGAGTCG------ACATG-ACAG-CCACATTAG-ACT------TTTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGA-AGACAGTTT---------GTAGTATT-TTGGA-G-TTCGACCAATTAGTCCAAAAACAGTGCGTAAT-CGTCTGTGCGAGCACAACATCAGACGAAGACGTCCAGCGGTGCG-T-CCAA-CACT-------G------CTTC
gi|11 : atattccataccctctaaacaatagACCCTT-TATCGCTGCAAATGGCGGAAT---------TTTCCAACAGGATAATGCCCGCCCACAC-GTTGG-AAG-----AGC-CA-GCAGAGA--CTTT--CTTG-C-CAACAACCACA-------T--------C-G----ACATCTTTCAATGGCC-A-GCACTTTCGCC-CGA--TTTATCGCCAATCGAGC--ACCTCTg
gi|12 : attcctggattgcgtcgatcagtcgtcgaacagttcaacgacgtttgtcggctgcaggtctacgtgcacgacgcccataaaaaggacctatgctgacccaaacagaacgacttcaatgggctcgacgttacttgagatggaagcttgcagactggaatcacgttctgtttagtgatgaatcacgcttcatgctgcgccgagtggatggcataacatgtgtgtaccgtagacacggtgaacgcttctctgatggatgtgtgctaggccatgaccgctttggaggcggaagtgtaatgatgtggggcggaataagtggtaatcgacgaacagatattgtaccgatcattgggacattaaatacacaacgataccgtaatgaaatccttgcacaacaattccgTGGAGGTGGCC-TTATGGTGTGGGGTGGAATAACAGCACGC-G-G--A---A--GGACCCCTCTACAAATTGTCAA-CGGAAATC--TCACCGGCCTA-CGCT-ATCGAC-ACAAAAT-TA-TTCAGC-GC-CATGTG--ATACCCTT-CAT-ACAA-AGACAGCAAAATAGCATCAC-TCTGCAGCAAGACAACGCAAGGCCATAT-GTTGC-ACG-T-GTAGT-CA-G----GGA-CTTT--TTTG-TTCAACAGA-CTG-------T---------CG----ATGCCTTGGCTTGGCC-A-GCTGTTTCTCC-CGACTTTTATCGCCGATCGAGC--ACGCCTGGGATG-AAATGGA----ACG-ACTTCTACGCCGT-TT-TCCAAATCAG-C-T----AGTGAAA-TTGGCTGG-TTTAGGCCAGACTTTAA-CCAACATC-TG-GA---A-CAACA---------------------TCCCTCGAG-CATTTCTTAACACTTAC--TTGTAAGTGGCAT-C-AATGAAGCGCCGTTGTC-AAACATGCGTGAATGCCAATGGTG-------------GTCAAAC--------------G-CATTATTA---AC-TT-
gi|13 : ------GTGAACAAAT-----GTT-----TA-TGG-------AAGTG----TTTGTACAC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGAAGTA-AGAA------GTG-GAAAA-GGGTTGC-TTGGATACACC-TTCGTT-AAGGAA---------------------AGCAC-TAATTAG-TTTGACAAAATCTACCCTT-CTGTCATGCCATGACT--CTGCGAAAA-CCAACGTATTCGT---AATCGT-CTGTTGGGA-G-CTTTAAGCTAGAA-TGGCACAAAATA-TCTTAGCAAGACAC-TCTGG-AGCT
gi|13 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcaC---TGGTAATACC-TGGGA--TTGACC-ACTTTTTGGG-CGTCCTCATTTTGA--CGT--CACATTA------ACAGGAACAA-CT-CATTAG-ACTGTGCAATGTGCACCTG----AGAATT---CATTTG---------------------CC-----------------TGACAAC-AGTTTGACTGC-TCTTAGCAggtaatacctgggattgaccactttttgggcgtcctcattttgacgtcacattaacaggaacaactcattagactgtgcaatgtgcacctgagaattcatttgcctgacaacagtttgactgctcttagca
gi|14 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcagtgaacaaatgtttatggaagtgtttgtacacacgagttttactggccaatactgtttggaagtaagaagtggaaaagggttgcttggatacaccttcgttaaggaaagcactaattagtttgacaaaatctacccttctgtcatgccatgactctgcgaaaaccaacgtattcgtaatcgtctgttgggagctttaagctagaatggcacaaaatatcttagcaagacactctggagATAAGGGTGA--T-GTTTTT-AACTATATCG-ATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTAACTGGCCAATACTGTTTG-A-GTACAGAA------GTG-TAAA--GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATGGTTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGA-AC-TTTGG-AGTTCACCA
gi|15 : gtatactaacgaaaaaaagaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaaatcgATAAGGGTGA--T-GTTTTT-AACTATATCGGATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACA--C-----ATT-----T--TGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTA-CTGGCCAATACTGTTTTGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGA--ACATCATTCGTT-AAG--A---A--------C--------AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATG-TTTCAATCTGGAA-TGGCACAAAATA-TCCTTGCAAGACAC-TTTGG-AGTTCACCatttagaaaacagcca
gi|16 : tatactaacgaaaaaaagaaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaatcgTGTTTCCCC-CGA--TTTATCGCCGATCAAGC--ACATTTAGGATGAAA-TGGA----ACG-ACGTCTGCGCAGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCTACA-----------------------------------------------------TCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCTGTTGTC-AAGCATTCGTGAATGCAAATGGTG-------------GTCATAC--------------G-CTTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|17 : gGAT-AAAATGGA----ACG-ACATCTACGCCGT-TT-ACCAAATCAG-C-CTGCCAGTGATA-TTGGCGGA-TT-------------AA-CTAACACG-TG-G----AACAACAT---------------------CCATCAAG-C------------------C----AGTGGCAT-C-AATGATGCGCTGTTTTC-AAACATGCGTGAATGCAATTGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TT-TA--AATTTAAGTTTGAATAccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|18 : -C-CCGA-T-CA-------G------CTCTG-G-CGTCCCCGTGA------TGCGATGCG-AAATTAGC-TTGG-T-GTAAGA-GGCATCGTCGTTTCAAGAA----AAGA---TTGGACGGATATTCTA--TATTCGA----AC-----------GA----------G---------TCGAAACATCT-CGAC------AGCAT-TGAGG--GTCGTGTTTGCGCTTACCGTTGTTCCGAAGAACGTTACATTCAATGACA-TC-TGT------GT---TATTC-AGCGCCACCAATTCGTCGGAAGGAGCGCTTATGGTCTGCTGTGGAATTACAACACAT-G-G--A---AG-G-ACCCtcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|19 : ctgctatctgtCT-AGGCTAGC-GTGG-T-GCAGAG-GTCATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACTGATGAATCCAGA----------T---------CT----CATTT-GGAT------AGCAG-TGAAG--GCTGTTGTAGAGCGTATCGTTTGGTTGGGGAGCGGTGC---TAG-GATGTTTG--------TGT---TGTGC-AACGTCGATAATTCACTGGAGGTAGCA-TAATGGCGTGGGGTGGAATAACAG--CACGT-G--A---AAGG-ACTCCTC
gi|2 : GAACA--CATGTTGTT-----TATTG--------AAGTA----TTCGT-CGCCAC-GAGTT-----------A-ACTGGTTGGA-GTA-AGAATTCGAAGTG-TAAAAAGGATT-C-TTGG--ACACTATTCGTT-AAGGAA---A--------TCACTTT--AGCATGT--TTAGTTTTGACAAAAT--ACCCTT-CTGTCATGCCACGACTTCCAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TG-CATAACATAATCATAGCAAAAC----TTGGCAGTTCATCAG---AAGGAACACGCATCCAAGTCGATTACGGAGACGTTTCTCAAC-AATC---TG-TAACAAT-CGAAA--TCGACCCACATTCTGGGGCGTCCTCG-TGTGAATCAT--CACGTCA------ACAGG-ACAAACCACATTAGGAC--------GTGCACCCG----AGAAATATATTTTT----------------------CCCCCCCCCCCCCCCCCCTAGGCAGCAAGTTT-ACTGC-TCGTAATATTCCTGGAAC-TTGGACCAACCAATCCAAGAACT-CG-GTAATTCGTCTGT-TGGGCACAACATCAGACCA-GACGTCCAGCG-TGCGTC-CCAA-CACTAGTCCTTG------CTTCA-A--GTCATAGT-AA-----T----CGCT-AGACTAGCCATGG-GAGCAGAC-GACATCGGCCATTCA-GAATA-TAGCAGTTCTGTTCAAACATGATGAAT--CC------A------------GA----------T---------TT----CATA--GAAT------GGC-G-TG-----TCCGTTGTAGATAACA-CGTCGCGTTGGGGAGTGGTAC---CAG-GACGCTCGTGT----T-------GTGCCAACGTCGAACATTCGGTGGAGGT-------------TGGG-TGGAATAACAGC-T---------------------CT-TACAAATTGT-AA-TGGAAATC--TCACCGGCGTAACGCT-ATCGA----GAAATACA-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGA-AACGCAAGACCACATAGTTGCCACGGT-GTAGC-CA-T----GGAATTTT--TTTG-TTCAACAGA-ATGATCGATGT--------CTGGTCCATGTCTTGCCTTGGCCAA-GCTGTTT-TCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATGG-----ACG-ACGTCTACGCCGTCTT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAG--CTTAA-CCAACCTCTTG-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTAATAACTT----T----AGTGGCAT-CAAATGAGGCGCAGTTATCAAAGCAT------ATT--AATGGTGTTACACCCCGCCAGTCACAC--------------GACGTTATTATATAC-TTATGATT--AATTCATGTTCGAATA
gi|20 : TG-------------GTTACAT--------------G-CGATATTA---AC-TT-TG-TT--AATTCAAGTTCAAATAtccagcgtctttcaagtagtgctcgaaattgaggtt
gi|22 : aATAAAGGTGC--TTGTTTTT-AACAATATC-GATAGTATCCGATCTCAGATttattgtctttcgagtgtgctgaaattgacattaatggattatgaaatgttgtaacgaatacgtctgttgaaagtatcacaaaaataaaatttgttcattaagttttatataatttcatatataaaaaacacacggtttctttttctgctagtatatttag
gi|23 : aagaaaatattctaagtataactggcggaaaaagaaactgctgcattagaaatttagtatatttttccccttaatttattgtttatatttatagactattgtttatatttataatcttaacaatcgATAAGG-TGACTT-GTTTT--AACAATATC-GATAGTATCCGA-TT
gi|24 : ataactggcggaaaaaagaaacttgctgcatagaaatttagtataatttccccttaatttattgtttatatttatagactattgttatttatttaataatcataaacaatcgATAAGGGTGA--T-GTTTCTGAATAACATTTGATAGTACCCGA-CCGAGATGTACG--GACATTTTTGATGGTTA---------GTGAACA--C-----A----------TG--------AAGTG----T
gi|25 : aaactttttttgtccagtatatatacaaaatataaacattcgCAGAC-GTCATCTGAGATTCACGCATG-C-GGA---CTGGAGTAGAGTTATC--T--TC------ACC----------GA----------
gi|3 : tgggcGAACA--C-----ATG-----T--TGTTTATTGCAAGTAA---TTCGTACGC-CCAGAGTT-----------A-ACTGTT-GGA-GTA-AGAATTCGAAGTGGTAAAA-GGATTCTGTTGG--ACACTATTCGTTTAAGGAATCAA--------CTTT-----AGCATGT--TTAGTTTTGACAAAAT--ACCCTTTCTGTCATGCCACG-CC--CAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGG-ATG-CTTCAAGCTGGAA-TG-CATAACATA-TCATAGCAAAAC----TTGG-AGTTCATCAAGGAAA----CAC-CACCAA-GTCGATTACGGAGACGTTTCGCAACCAATC---TGGTAACAAT-CAGAAAATCGACC-ACATTCTGGG-C-TCCTCG-TGTGAT-CAT--CACGTC-------ACAGG-ACAA-CCACATTAGGAC--------GTGCACC-G----AGAAATA--TATTTTTCCCCCCCCCCCCCCCCCCCCCC-----------------AGGCAGCAAGTTTTACTGC-TCGTAAT-TTCCTGGA-CCTTGGACCAACCAATCCAAGAACTGCG--TATT-CGTCTGT-TGGGCACAACATCAGACCAAGACGTCCAGCG-TGCG-CACCAAGCACT-------GTCCTTGCTTCACA-CGTCATAGT-A------T----CGCTCAGACTAGCCATGGAG-GCAGACAGACATCGGCCAT-CA-GAATAATAG-----------CAGT--TCTG--T--TTTTCAAAACT----------GA----------T---------TG----AATTCCAGATTTCATAAGCAACTGGCGTTGTCGTTGTAGATAACA-CGTC-CGTTGGTGAGTGGTAC---CAG--ACGCTCGTGT----T-------GTGCCAACGTCGACA-TTCGGTGGAGGT--------TGG-GTGGA----AATAACAGC------------------------TCTACAAATTGTCAAATGGAAATC--TCACCGGCGTA-CGCTTATCGA----GAAAT--A-TTCAGCCGC-CAT-TG-TACACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGAAAACGCAAGACCACAT-ATTGCCACG-T-GTAGCGCT-G----GA--ATTT--TTAG-TTCAACAGA-ATG-------TATCGATGTCTGGTCCATGTCTTGCCTTGGCC-AAGCTGTTTTCCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATGAAA-TGGA----ACG-ACGTCTACGCCGTCTT-ACGCAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAGGCTTTAA-CCAACCTC-TT-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTGAATACTT----T----AGTGGCATCC-AATGAGGCGCAGTTATC-AAGCAT------ATT--AATGGTG-------------GTTACACCCCGCCAGATCACAG-CGTT-TTATATACATT-TGATT--AA-TCATGTTCGAATAcgagtccaggttcaatctacggcgaacggatgggcaaaaccgtttctatcgaaagggagaacgc
gi|4 : GA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGG--TATTCCTCGTCCTCTTTTACAGG-ACAA-AAACATTAG-ACT------TTTGCACCTG----GGGAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACT-------AGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGTGCGTAAA-CGACTGCACGAGCACAACACCAGAACAAGATGCCCAGCGGCGCG-C-CCAA-TACT-------G------CTTCA-A-CGGCATTGT-A------T----CGCT-AGACTATC-GTAG-T-GCATAC-TACATCTGCGATTTA-GAATA-CAGGA---CTGGGCCAATAATCTG--T--CC------ACT----------GATGAATCCAGGT---------TT----CATTT-GAAT------AGCAG-TGACA--GCCGATGTAGAGTGTATCGTCTCGTTGGGGAGCGGTAC---CAG-GACGCTTGT---------T---TGTGT-AACGTCAACAAGTCGGTGGTGGTAGCG-TTATGGTGAGTGGTGGAATAACAG--CACGT-G--G---A--------CTCTACAAATTGTCAA-TGGAAATC--TCACTGGCGCA-CGGT-ATC-AAAACGAAAT-TA-TTCAGC-GC-TATGTG--ATACCCTT-CCT-ACAG-AGACAGCTTAATCACATCTC-TCTGCAGCAAGACACCGTAAGGCCACAT-GTTGC-ACG-T-GTAGT-CAGG----GG--CTTT--TTTG-TTCAACAGA-ATG-------T---------CG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-AGA--TTTATCGCCGATAGAGC--ACGTCTGGGATG-AAATGCA----ACG-ACGTCTA---CGT-TT-ACCAAATGTG-C-C----AGTGAAATTTGGCTTC-TTTAGGCCAGGCTTCAC-CCAAGATC-AG-ATTCTA-TAATGT--------------------TC-----AA-CATCCCTAAACATTT----T----AGTGTCAT-C-AATGAGGCGCCGTTGTC-AGGCCTGCGTGAATGCAAATGGTG-------------GACACAC--------------G-CAATATCA---AT-TT-T--TTAAAATTCAAATTCGAATccagcgtctttcagtagtgcgaaattgagcg
gi|5 : ATAAAGACGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCTGATGCACGCGGAC-GTTTTCTTGGTTAGT---------GAACA--C-----GTTGTTTAT--TG--------AAGAG----TTCGTACAC-AT-GAGTTTTA-CTGGCCAATACTGTTTGTA-GTA-GGAA------GTA-TAAAA-TGTTTGT-TTGG--ACACTATTCGTT-ACGGAA---A------------------GCAC-A--TTAGTTTTGACACAAGTTACCCTT-CTGCCATGCCACGACT--CAACGAAAA-GCAA------TGT---AATCGTGCTGTTGGGATG-CTTCAAGTTGGAA-TGACACAA---A-T--TAGCAAATCAC-TTTTG-AGTTCATTAG---AA----TAT-CATCCG-GTC-ATTATGGAGACGTTTC-CAAC-AACC---TGGTAACACT-CGGGA--TCGACC-ATGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------GCAGG-ACAT-CCACAATAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-------------------------AGTTTGACTGC-TCGTAGC-TTCCTGGA-C-TTCTACCTATCAGTCCGAGAACTGCAAGTAAT-CGTCTGAGCGAGC---ACATCTGACCAAACCGTCCTGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-TGTCATCGT-A------T----CGCA-AGACTAAC-GTGG-T-GTAGAC-AAC-------ATTCA-GAATA-CAGTA---CTGGACCAATATTTTG--T--TC------ACT----------GA----------TGAA------TC----CATTT-GGAT------AGCAG-TGACG--A--G-TGTAGAGTGTATCGTCGCGTTGGGGAACGGTAC---CAG-GATGCTTG--------TGT---TGTGC-AACTTTGACAGTTTGGTGGAGGTAGCG-TTAT-G-GTGGGGTGGAATTACAG--CACGT-GGAA---A--G-ACCCCTCTACAAATTATCAA-TGGAAATC--TCACCCGCGTA-CGCT-ATCG-AGATGAAAT-TA-TTCAGT-GT-CATGTG--ATACTCTT-CAT-ACAA-AAACAGCAATAGCACATCAgccagtgtctttcgagtgagctgaaataggcgttattcaacgttaaaattaatgggttatgaaatgttggaacgaatacatttgttaacagtattacaaaaaacaaaatatgttcattgttatactttattatcttttttttccatatatcaaataatgcacagtttcttttttcctctggtatatctttaatctgctttataatgcagagttttgttcattttcaaacattgcggcaacgtagaa
gi|6 : tgaaacaagtagttagaaatagaatatatactagcggaaaaagaaactgtgcattatgaaatttagtataatttttctatatctattgtttatatttataaaatctaaacaattgA-TTCC-------G------TTTCA-AACGTCATCGT-AATCGGAT----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGTCAATATTCTG--T--TC------ACT----------GA----------TAAATCCAGGTT----CATTG-TGAT------AACAA-TGGCG--GCCGTTGTAGAGTGTATCGTCGCTTTGAGGAGTTGTA--------------------------T---TGTGC-AACGTAGACAATTCTATGGAGGCAGTT-TTTTGA-TTTGGGTGGAAAAACAGC-TTG-TGG--A---A--GTACCCTTCTAAATATTTTCAA-TGGAAATT--T
gi|6 : ttgtATACTTTT-CAC-ACTG-AGACCGAAAAATCAAATCAC-TCTGCAACAAGTCAACGCAAGACCACAT-GTTGC-ACG-T-GTAGG-CA-G----GGC-CTCT--TTTG-TTCGATAGA-ATG-------T---------CG----ATGTCTTGCCTTGTCC-A-GCTGTTTCCAC-CGA--TTTCACACTAATCGAGC--ACTTCTGGAATGAAATTGAACGACACGTACATCTACGCCGT-TC-ACCAAATCAG-C-T----AGTATCA-TT-------TTCTGGTCAGACTTTAA-CCAACACC-TGTA----A-CAACAT-----------------------CTCAAA-TATGTCTGAACACTTTAAAT----AGTGGCAT-G-AATGAGGCGCCGTTGGC-AAGCATGTGTACATGCAAATGGTG-------------GTCACAC--------------G-CACTATTA---AC-TT-TG-TT--AATTCAAATTCGAATAggctctttgatacttttcacactgagaccgaaaaatcaaatcactctgcaacaagtcaacgcaagaccacatgttgcacgtgtaggcagggcctcttttgttcgatagaatgtcgatgtcttgccttgtccagctgtttccaccgatttcacactaatcgagcacttctggaatgaaattgaacgacacgtacatctacgccgttcaccaaatcagctagtatcattttctggtcagactttaaccaacacctgtaacaacatctcaaatatgtctgaacactttaaatagtggcatgaatgaggcgccgttggcaagcatgtgtacatgcaaatggtggtcacacgcactattaactttgttaattcaaattcgaatactactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|7 : ttgtattccgtttcaaacgtcatcgtaatcggatcgctagactagcgtggtgcagacgacatctgcgattcagaatacaggactgggtcaatattctgttcactgataaatccaggttcattgtgataacaatggcggccgttgtagagtgtatcgtcgctttgaggagttgtattgtgcaacgtagacaattctatggaggcagttttttgatttgggtggaaaaacagcttgtggaagtacccttctaaatattttcaatggaaatttggctctttgT-ATCGA-GACGAGAT-TA-TTCAGC-ACATATGTG--ATACCCTT-CAT-ACAG-AGA-AACAAA-TCACATAGC-TTT-CAACAAAACAATGCAAGGTCACAT-GTTGC-ACG-T-GTAAT-CA-G----GG--CTTT--ATTG-TTCAATAGA-ATG-------T---------CG----A-GTCTTGTCTTGTCC-A-GATGTTTCCCC-CGA--TTTATCGCCGATCAAAC--ATGTCTTGGATGAAAAT-GA----ACA-ACAT----------------AAGTCAA-CGC----AGTGTCA-TTGGCTGA-TTTCGGCCTGACTTTAATCCACCATC-TG-G----A-CAACAT--------------------TCCCACAA---ATTCCTGAGTACTT----T----AGTGGCAT-C-AATGTGACACCAATATC-AAACATGGCTAAATGCAAATGGTG-------------GTCAGACG-------------G-CGTTATTA---AC--T-TG-TT--AATTCAAGTT-GGATActactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|8 : AATATCGGATAGTACCCGA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT---------GAACA--CAT---GTT-----TATTG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-T-GG--ACACTACTCGTT-GAGGAA---A--------GCAGTCGGAAGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA-ACAA------TGT---AATCGTGCTGTTGGAATG-CTTCAAGCTGGAA-TGGCTCAATATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTAACATTCCGGGA--TCGACC-ACGTTCTGGG-CGTCCT-G-TGTGA--CGT--CGCGTCG------ACAGG--CAA-CCACATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGTCCAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGtaatggctttagattgtggctaaattgacgttattcgacattaacattaaataatttatgaatgctgtaacgaatataatttgtttattgttatttttaaattattttcttcatatattaaattaaagtaatacacattttctttttttttttttcgctagtatacatgtataatggcagccaaattttcttactctctgtttgaagtgcatgcaatgtagaa
gi|9 : ATATCGGATAGTACC-GA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAG-T------G-AAACA--T-----GTTTA---T--TG--------AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATA-GGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTG--TTGG--ACACTACTCGTT-GAGGAA---AGCAGTCGGA--------AGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA---AA------CATGTAAATCGTGCTGTTGGAATG-CTTCAAGCTGGAATTGGCTCAATTAA-TCGTAGGCAGACACGTTTGG-AGTTCATCAG----A----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTA--ATT-CGGG---TCGACC-ACGTTCTGGG-CGTCCTTG-TGTGA--GCT--CGCGTCG------ACAGG-ACAA-CCA-ATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAG-TTGACTGCTTTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGT-CAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGG-
blockSeqs : CT T T G T CG AT A G CTTT T CATGTTGTTTATTGC A C A A A C TTCGAA G A G TG AT T AGCAGTCGGA G AA G T G TC A CGTATT GTA G T G A A G G C GGA GGAA G A G T T C . C AA C G T AT TC CTCTTTT A A G TGTGCAA . A ATA TTCCCCCCCCCCCCCCCCCCCCCC C G T A A C GT C T G G T A G AGTCCTTG C A G ATCGGAT C C GA A G A A G GTT A AA AT ACTGATGAATCCAGATCT CCA TTCATA C TT C C G ATT T T CTGTGT C G GC T G A CACGCGGAAGGACC A . A T AAA AC . C A G T . TC T C G A TC T A C GT CG GCAGAGA . . C TATCGATGTCTGGTCC A A . CT . A A CGAC T T C . . G TGCC T T A T T T ATTCT A T C GC ACTTGTA C A A GCG C TTACACCCCGCCA CCCGCCAGATCACA A TAT A A A AA
blockSeqs : . . G G . . T A G CTTT T CATTTTGTTTGTTG . . . . . . TTCGAA . . T C . . AGCAGTCGGA G . C . A . A . G . . G A . T . . . . . . G C G . . . . . . . T . G . . G T . A A CCCCCCCCCCCCCCCCCCT A T . A . . GC C . A G . . . GTCCTTG . . . TGCGA . C AG . T C . G . G . . ACTGATGAATCCAGGTTT TC . . . C T T . . C CGTGTT C A C T G T CACATGGAAGGACC . . . . AC T . C . G T . T A . A A TG C . C T C TGGAA . . . ATCGATGTCTGGTCC . . . . . A A . . G C . . . . . T G . C . GA . T C GC TAAAT . . . TCG C . G . TAT . . A .
blockSeqs : . . G G . . T T G GTT T CATTTTGTTTGTTG . . . . . . . . . T T . . ATCACTTT . . T . A . . . G . . G A . C . . . . . . . C . . . . . . . . . . A . . . T . A . GCC A G . A . . GT A . G G . . . G . . . AT . . T . G . . C . T . . ACTGATAAATCCAGGTT TG . . . A T G . . C CGTGTT . A A C G A CACGTGAAAGGACT . . . . AG T . . . G . . T A . G . TG A . . T T GGGA . . . TCG . . . . . A A . . A . . . . . . . G . T . TA . T C G T . . . GCG C . . . . . . . .
blockSeqs : . . . T . . G A G GT T CATGTTGTTTATTG . . . . . . . . . A T . . TCAACTTT . . T . A . . . . . . G A . C . . . . . . . T . . . . . . . . . . A . . . T . A . CC A G . A . . GC C . G A . . . G . . . T . . T . T . . G . A . . TTCAAAACTGATTG TG . . . A T T . . C TGTGT . A G T G A CACGTGGAAAGACC . . . . AG T . . . G . . T A . G . TG C . . T C GGGG . . . TCG . . . . . A A . . G . . . . . . . G . T . G . T C G C . . . GCG C . . . . . . . .
blockSeqs : . . . G . . T A . GT T CGTTGTTTATTG . . . . . . . . . A C . . GA . . T . A . . . . . . A C . A . . . . . . . T . . . . . . . . . . G . . . T . G . CC A G . A . . C C . G A . . . G . . . T . . T . G . . G . G . . GAACGAGTCGAAA TG . . . T T G . . C TGTGT . A G . G A CTTGTGGAAGTACC . . . . A T . . . . . . C T . A . T C . . T T GGGC . . . TCG . . . . . A T . . G . . . . . . . A . T . A . T C A T . . . GTG C . . . . . . . .
blockSeqs : . . . G . . T . . GT . AATGTTTATGG . . . . . . . . . T T . . AC . . T . A . . . . . . G C . A . . . . . . . T . . . . . . . . . . G . . . T . A . CC A G . A . . . . . . . . . . G . . . T . . T . T . . T . A . . ACTGATGAATC GT . . . T . G . . . TGTT . A T . G A CACGTGGA . . . A . . . . . . . T A . A . . C . . T G GGA . . . TCG . . . . . . A . . G . . . . . . . A . C . A . . . A T . . . GGC C . . . . . . . .
blockSeqs : . . . G . . . . . . . CATGTTTATTG . . . . . . . . . T T . . AC . . T . C . . . . . . G T . G . . . . . . . . . . G . . . . . . . CC . . . . . . . . . . . . . . G . . . T . . T . T . . G . G . . AGATTT G . . . T . . . . . T . . . . . T CT . . . . C . . . . . . T GGG . . . TCG . . . . . . . . . A . . . . . . . . . T . G . . . . T . . . . . . . . . . . . .
blockSeqs : . . . TGTTTATTG . . . . . . . . . T . . . A . . . . C . . . . . . . T . G . . . . . . . . . . . . . . . . CC . . . . . . . A . . . T . . . . . . . . . . . . . . . A C . . . . A . . . . . . . A . . . . . . . . . . . . . . . . T . . . . . . . . . . . . .
blockSeqs : . . TTATTA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . .
blockSeqs : CATG .
blockSeqCons : GTT****** CATGTTGTTTATTG*************** **** ACATC**************** *** **** ACCGATGAATCCAGATTT***************************** TG* CGTGT*********** ** A** ** T** T* GGGA****** ** TCG******************** ** T********************
originalCons : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACA--C-----GTT-----T--TG--------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAA---A--------N--------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TC------ACT----------GA----------T---------TT----CATTT-GGAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT----TTGT---TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGAAGACGAAAT-TA-TTCAGC-GC-CATGTG-TATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACG-T-GTAGC-CA-G----GG--CTTT--TTTG-TTCAACAGA-ATG-------T--------CCG----ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
finalCons : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACACATGTTGTTTATTG---------------AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGG--ACACTATTCGTT-AAGGAAACATC----------------AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAA-TGGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGA---CTGGGCCAATATTCTG--T--TCACCGATGAATCCAGATTT-----------------------------CATTTG-GAT------AGCAG-TGACG--GCCGTTGTAGAGCGTATCGTCGCGTTGGGGAGCGGTAC---CAG-GACGCTCGTGT-----------TGTGC-AACGTCGACAATTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAACAGC-CAC-T-G--A---A--G-ACCCCTCTACAAATTGTCAA-TGGAAATC--TCACCGGCGTA-CGCT-ATCGA--ACGAAAT-TA-TTCAGC-GC-CATGTG--ATACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTGC-ACGT--GTAGT-CAGGGA------CTTT--TTTG-TTCAACAGA-ATGTCG--------------------ATGTCTTGCCTTGGCC-A-GCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACATT--------------------CCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): ACTTTGTTGATTTAAATTCGAATACTAGTGTCTTTCGAGTGTGCTGAAATTAACGTTATTCAACGTTAACACAAATGGATTATGAAATGTTGTGACGAATAAATTAATTTTGTTTTAAAACAGCATTAAAAAGTAAAATTTGTTCATTGTTATTTTTTTTTTTTATTATTATCTTTT
Unaligned ( gi|26 ): AACAGTGCGTGTTGTATTCGTACATACTCTTGTGCGAATAAGTTGCATCTACACCTGCATTTTTAATTGCCACCAATTCAATAGAGGGGACGATATGGTCTGGGAAGAATTACAACATATG
Unaligned ( gi|27 ): AGTTTGTTGCAAAATAATTCCAAGTCCGAATACCAATGTCTTTCGAGTGTGTTGAAATTGACGATATTCGACGTTAACATTAATGGATTATGAAA
Unaligned ( gi|28 ): CATTTCAAGAATATCACGATTGGGCGAAAATTCTTTTTACGGAGGAATCTTGACAGCAGTACCGGTCGTGTTTGGGCTTCCGTCGTGCCGGAG
Alignments
lowQualScore : 1 44444444444 1111 222222 8888888888888 111111 111 111 1111 1 1 11 1111111 1111111 111 55555555555555555555555555555555555555555 11 11111111111111 11111111111 111111111111 2222222222222 22222222222 2 66666666666666666666666 111111 111111 222222 11 111111 1 11 22222222222 22222222222 1 1 111111 444444444444444444444 11 111111111 2222222222222 22222222222222 111
lowQualScore : 66 5 5 2 4 66 55 9 44444444444 888 4 2222 4 4 0 4 0 4 4 333333 4 4 1 4 3 55 4 0000000000000 8 55 4 4 0 2 55 8 111111 555 4 4 1 4 4 3 0 4 4 000 2222 5 5 1 1 1 5 888 1 5 66 4 4 4 00 66 4444444 4 4 8 7777777 9999 3 222 55555555555555555555555555555555555555555 4 5 4 1 5 5 11 7 5 4 0 6 4 4 4 77777777777777 4 4 4 77777777777 4 8 666 4 1 8 4 4 44 3 444444444444 4 4 5 4 8888888888888 66 8888 2 4 5 777 2 0 777 4 1 3 4 11111111111 8 66 4 2 55 1 0 2 1 4 44444444444444444444444 66 444444 5 444444 5 66 1 2 5 4 4 555555 4 4 4 4 66 44 00 9999 000000 4 44 4 22 0 666 1 0 5 5 5 5 5 5 6 5 2 66 5 5 11 5 33333333333 33333333333 0 4 66 66 2 9999 4 3 8 4 4 4 9999 4 8 0 3 0 4 5 4 888888 4 111111111111111111111 2 0 00 0 777777777 4 4 4 555 1 2222222222222 77777777777777 4 444 4 4 8 66
lowQualScore : .. . . . . .. .. . ........... ... . .... . . . . . . . ...... . . . . . .. . ............. . .. . . . . .. . ...... ... . . . . . . . . . ... .... . . . . . . ... . . .. . . . .. .. ....... . . . ....... .... . ... ......................................... . . . . . . .. . . . . . . . . .............. . . . ........... . . ... . . . . . .. . ............ . . . . ............. .. .... . . . ... . . ... . . . . ........... . .. . . .. . . . . . ....................... .. ...... . ...... . .. . . . . . ...... . . . . .. .. .. .... ...... . .. . .. . ... . . . . . . . . . . . .. . . .. . ........... ........... . . .. .. . .... . . . . . . .... . . . . . . . . ...... . ..................... . . .. . ......... . . . ... . ............. .............. . ... . . . ..
lowQualScore : 99 0 0 5 0 99 11 5 33333333333 777 0 5555 0 0 8 0 8 0 0 000000 0 0 0 0 2 55 0 1111111111111 0 55 7 0 8 2 55 0 555555 000 0 0 6 9 0 2 8 0 0 000 1111 7 7 4 4 4 7 888 4 0 11 4 4 4 66 11 7777777 4 4 9 3333333 4444 6 222 00000000000000000000000000000000000000000 4 7 4 9 0 0 00 6 0 5 1 5 4 4 0 77777777777777 4 4 4 77777777777 0 0 444 4 7 9 4 1 66 8 000000000000 0 0 0 7 9999999999999 33 1111 0 4 2 888 9 1 888 4 9 4 4 11111111111 9 11 4 3 66 0 0 5 1 0 33333333333333333333333 99 444444 0 444444 0 99 4 5 0 4 4 777777 4 4 4 4 33 66 66 4444 444444 4 66 6 88 0 000 4 2 0 0 0 0 0 0 9 0 0 99 0 0 99 0 88888888888 88888888888 0 4 11 11 8 4444 4 7 9 4 4 4 4444 4 9 1 7 8 4 2 4 222222 4 888888888888888888888 3 3 88 7 777777777 4 4 4 999 1 0000000000000 55555555555555 0 000 0 0 9 11
consensus : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGT-------GTGAACACATGTTGTTTATTG-AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGGA--CACTATTCGTT-AAGGAAA-CA---TC---AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAAT-GGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGACTGGACCAATATTCTGTTC------A--C-TGAT-GAAT-CCAGGTTTCAT--T--------TGGATAGCAG-TGACG--GCCGTTGTAGAGCGTATCGT---CGCGTTGGGGAGCGGTAC---CAG-GACGCTTG-TGT-----------TGTGC-AACGTC--GACAA-TTCGGTGGAGGTAGCG-TTATGGTGTGGGGTGGAATAA-CAGC-CAC-T-G--A---A--G-ACCCCTCTACAAAT--TGT------CAA-TGG------AAAT-C--TCACCGGCGTA-CGC-TATC-G--A-ACGAAAT-TA-TTCAG-C-GC-CAT-GTG--AT----ACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTG-C-ACG-T-GT-AGTCA-GGGACTTT--TTTG-TTCAACAGA-ATG--T-CG-----------ATGT-----------CTTGCCTTGGCC-AGCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
Reference ( family-632 ) : ATAAGGGTGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTCATGGTTAGTT------GTGAACACATGTTGTTTATTG-AAGTG----TTCGTACGC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGGA--CACTATTCGTT-AAGGAAA-CA---TC---AGCAC-T--TTAGTTTTGACAAAATTTACCCTT-CTGTCATGCCACGACT--CAGCGAAAA-CCAA------CGT---AATCGTGCTGTTGGGATG-CTTCAAGCTGGAAT-GGCACAANATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTACGGAGACGTTTC-CAAC-AATC---TGGTAACACT-CGGGA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------ACAGG-ACAA-CCACATTAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TCGTAGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGCGCGTAAT-CGTCTGCGCGAGCACAACATCAGACCAAGACGTCCAGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-CGTCATCGT-A------T----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGACTGGGCCAATATTCTGTTC------A--C-CGAT-GAAT-CCAGATTTCAT--T--------TGGATAGCAG-TGACG--GCCGTTGTAGAGCGTATCGT---CGCGTTGGGGAGCGGTAC---CAG-GACGCTCG-TGT-----------TGTGC-AACGTC--GACAA-TTCGGTGGAGGTAGCG-TTATGG-GTGGGGTGGAATAA-CAGC-CAC-T-G--A---A--G-ACCCCTCTACAAAT--TGT------CAA-TGG------AAAT-C--TCACCGGCGTA-CGC-TATC-G--A-ACGAAAT-TA-TTCAG-C-GC-CAT-GTG--AT----ACCCTT-CAT-ACAG-AGACGGCAAAATCACATCAC-TCTGCAGCAAGACAACGCAAGGCCACAT-GTTG-C-ACG-T-GT-AGTCA-GGGACTTT--TTTG-TTCAACAGA-ATG--T-CG-----------ATGT-----------CTTGCCTTGGCC-AGCTGTTTCCCC-CGA--TTTATCGCCGATCGAGC--ACGTCTGGGATGAAAATGGA----ACG-ACGTCTACGCCGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCAACATC-TG-G----A-CAACAT--------------------TCCCTCAAG-CATTTCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGCGTGAATGCAAATGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|1 : ATAAAGGTGA--T-GTTTTTGAACAACATCGAATAGTACCCGA-CTCAGATGCACG--GAC-TTTTTTATGGTTAGTCAACTTGGTGAACACAT------T-TTG-AAGTGCATATTCGTATGC-AC-GAGTTTTA-CTGGCCAATATTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTATGT-TTGGA--CACAATTCATT-TGGGA---------T---AGCAC-T--TTAGTTTTGACAAAAGTTGTCCTT-ATGTCATGCCACGACT--CGGCGAAAA-CCAA------CGT---AATCTTGCTGTTGGGATG-CCTCAGGCTGGAAT-GGCACAAAATA-TCGTTGCAAGACAC-TTTGG-AGTTCATTGG---AA----GAC-CATCCA-GTC-ATTGTGGAGACGTTTC-TAAC-AATCAGCTGGTAACACT-CGGGA--TCGACC-ACGTTTTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------AAAGG-ACAA-CCACATTAG-ACG------TGTGCACCTGCATGAGAAAT---CTTTT----------------------CC-----------------AGACAGTCAGTTTAACTGC-TCGTAGCATTCTTGGA-C-TTCGACCAATCAGTCCAAGGACTGTGTGTAAT-TGTCTGCGTAAGCACAACGTTAGACCACGACGTCCAGCGGTGCG-C-TCAA-TACT-------G------CTTCA-G-CGTCATCGT-A------T----TGTT-GGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGAACTGGACCAATATTCAGTTC------A--T-T------------GATTTCAT--T--------T-CATAGCAG-TGACA--GCCGTTGTAGAGTGTATCGT---CGCCTTGGGGAGCGATAC---CAG-GACGCTTT-TGTTAAATTGTACATGTGC-AACGTC--AACAA-TTCGGTGGAGGTAGCG-TTACGG-GTGAGCTGGAAT-A-CAGC-CAC-T-G--AATGA--G-A-CCTTCTACAAAT--TGT------C-A-TGG------AAAT-CTATCATCGGCGTA-C-C-TCTC-GGAG-ACGAAAT-TACTTCAT-C-GC-CAT-GTGATAT----ACCCTTACAT-ACAG-AAAC-GCAAAATCAC-TCAC-TCTGCAGCAAGACAA-ACAAGGCCACAT-GTTG-C-ACG-TCGT----------ATTTTAATTTGTTTCAACAGA-A-G--TCCG-----------ATGT-----------CTTGCATTGGCC-AGCCCCCCCCCCTCCA--TTTATCG-CGATCGAGCTGACGTTTGGGATAAAAATGGA----AAG-TC--CTACGCCGT-TTAACCAAA-CAGAA-C----AGTGACA-TTGCTTGA-TTTAGA-CAGGC-TTAA-CCAACA-C-TG-G----A-CAACGTNNNNNNNNNNNNNNNNNNNNNNNNNCAAG-CATTTTTGAACACTT----T----AGATGCAT-C-AATGAGGCGCCGTTGTC-AAGCATGTACGAATACAAATGGCG-------------GTCACAC--------------G-CGTAATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|10 : ATAAAGGTGG--T-GTTTTTTAACA-TATCGGATAGTTCCCGA-CTCAAATGTGCA--GAC-----------------------------ACATGTTGTTTATTA-ATGTG----TTCGTACGC-AC-GAGTGTTA-CTGGCCAATACTGTTTGGC-GTA-AAAC------TTG-TAAAA-G-----------A--CACTATTCGTT-AAGGAAG------------ACAC-T--TCAGCGTATACAAAATGTACCCTC-CTGTCATGTCATGGTT--AAGAGAAAA-CCAA------AGT---AATTGTGCTGTTGAGATT-CTTTAAGTTGGAAT-GGCACAAACGA-TAGTAACAAGGCAC-TTTGG-AGTCCATCGA---AA----CAC-CATCTA-GTC-ATTATGGAGACGTTTA-CAAC-AATC---TGGCAACACT-CAGGA--TCAACA-ACATTCTGGG-TGTCCTCG-TGTGA--CGC--CGAGTCG------ACATG-ACAG-CCACATTAG-ACT------TTTGCACCTG----AGAAAT---CGTTT----------------------CC-----------------AGA-AGACAGTTT---------GTAGTATT-TTGGA-G-TTCGACCAATTAGTCCAAAAACAGTGCGTAAT-CGTCTGTGCGAGCACAACATCAGACGAAGACGTCCAGCGGTGCG-T-CCAA-CACT-------G------CTTC
gi|11 : atattccataccctctaaacaatagGACTGGAATCACGTTCTGTTT------A--G-TGAT-GAAT-C-ACGCTTCATGCTGCGCCGAGTGGATGGCA--TAACA-------TGT---GTGTACCGTAGACACG---GTGAACGCTTC---TCT-GATG---GATGT------------GTGC-TAGGCCATGACCGCTTTGGAGGCGGAAGTG-TAATGATGTGGGGCGGAATAAGTGGT-AAT-C-G--A---C--G-A-------ACAGATATTGTACCGATCAT-TGGGACATTAAATAC--ACA-------A-CGA-TACC-GT-A-ATGAAAT-CC-TT--G-C-AC-AAC-A----ATTCCGACCCTT-TATCGCTGCAAATGGCGGAAT---------TTTCCAACAGGATAATGCCCGCCCACAC-GTTG-G-AAG-A-GCCAG-CA-GAGACTTT--CTTG-C-CAACAACCACA--T-CG-----------ACAT-----------CTTTCAATGGCC-AGCACTTTCGCC-CGA--TTTATCGCCAATCGAGC--ACCTCTg
gi|12 : attcctggattgcgtcgatcagtcgtcgaacagttcaacgacgtttgtcggctgcaggtctacgtgcacgacgcccataaaaaggacctatgctgacccaaacagaacgacttcaatgggctcgacgttacttgagatggaagcttgcaTGGAGGTGGCC-TTATGGTGTGGGGTGGAATAA-CAGCACGC-G-G--A---A--GGACCCCTCTACAAAT--TGT------CAA-CGG------AAAT-C--TCACCGGCCTA-CGC-TATC-G--ACACAAAAT-TA-TTCAG-C-GC-CAT-GTG--AT----ACCCTT-CAT-ACAA-AGACAGCAAAATAGCATCAC-TCTGCAGCAAGACAACGCAAGGCCATAT-GTTG-C-ACG-T-GT-AGTCA-GGGACTTT--TTTG-TTCAACAGA-CTG--T-CG-----------ATGC-----------CTTGGCTTGGCC-AGCTGTTTCTCC-CGACTTTTATCGCCGATCGAGC--ACGCCTGGGATG-AAATGGA----ACG-ACTTCTACGCCGT-TT-TCCAAATCAG-C-T----AGTGAAA-TTGGCTGG-TTTAGGCCAGACTTTAA-CCAACATC-TG-GA---A-CAACA---------------------TCCCTCGAG-CATTTCTTAACACTTAC--TTGTAAGTGGCAT-C-AATGAAGCGCCGTTGTC-AAACATGCGTGAATGCCAATGGTG-------------GTCAAAC--------------G-CATTATTA---AC-TT-
gi|13 : ------GTGAACAAATGTT---TATGG-AAGTG----TTTGTACAC-AC-GAGTTTTA-CTGGCCAATACTGTTTGGAAGTA-AGAA------GTG-GAAAA-GGGTTGC-TTGGATACACC-TTCGTT-AAGGAAA------------GCAC-TAATTAGTTT-GACAAAATCTACCCTT-CTGTCATGCCATGACT--CTGCGAAAA-CCAACGTATTCGT---AATCGT-CTGTTGGGA-G-CTTTAAGCTAGAAT-GGCACAAAATA-TCTTAGCAAGACAC-TCTGG-AGCT
gi|13 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcaC---TGGTAATACC-TGGGA--TTGACC-ACTTTTTGGG-CGTCCTCATTTTGA--CGT--CACATTA------ACAGGAACAA-CT-CATTAG-ACTGTGCAATGTGCACCTG----AGAATT---CATTTG---------------------CC-----------------TGACAAC-AGTTTGACTGC-TCTTAGCAggtaatacctgggattgaccactttttgggcgtcctcattttgacgtcacattaacaggaacaactcattagactgtgcaatgtgcacctgagaattcatttgcctgacaacagtttgactgctcttagca
gi|14 : ataaaccaaagtagtgctcttgattgcttactgacgatgaaatattcagtgaacaaatgtttatggaagtgtttgtacacacgagttttactggccaatactgtttggaagtaagaagtggaaaagggttgcttggatacaccttcgttaaggaaagcactaattagtttgacaaaatctacccttctgtcatgccatgactctgcgaaaaccaacgtattcgtaatcgtctgttgggagctttaagctagaatggcacaaaatatcttagcaagacactctggagATAAGGGTGA--T-GTTTTT-AACTATATCG-ATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACACATTTTGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTAACTGGCCAATACTGTTTG-A-GTACAGAA------GTG-TAAA--GGTTTGT-TTGAA--CATCATTCGTT-AAGAA---------C---AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATGGTTTCAATCTGGAAT-GGCACAAAATA-TCCTTGCAAGA-AC-TTTGG-AGTTCACCA
gi|15 : gtatactaacgaaaaaaagaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaaatcgATAAGGGTGA--T-GTTTTT-AACTATATCGGATATTACCAGA-CTCAGATGCACG--GGC-TTGTTC----TTACTTT-----GTGAACACATTTTGTTTGTTG-AACTG----TTTGTACGC-AC-GAGCTTTA-CTGGCCAATACTGTTTTGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-TTGAA--CATCATTCGTT-AAGAA---------C---AGCAC-T--TTAATTTTGACAACATTTACCCTT-T-----------GACT--AAGCAAAAA-CTAT------CGT---AATCTTTCTGTTTGGATG-TTTCAATCTGGAAT-GGCACAAAATA-TCCTTGCAAGACAC-TTTGG-AGTTCACCatttagaaaacagcca
gi|16 : tatactaacgaaaaaaagaaactgtgcaatataacatttactataatttttctttatgcattgtttatattcataaaatcttaacaatcgTGTTTCCCC-CGA--TTTATCGCCGATCAAGC--ACATTTAGGATGAAA-TGGA----ACG-ACGTCTGCGCAGT-TT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGA-TTTAGGCCAGGCTTTAA-CCTACA-----------------------------------------------------TCTGAACACTT----T----AGTGGCAT-C-AATGAGGCGCTGTTGTC-AAGCATTCGTGAATGCAAATGGTG-------------GTCATAC--------------G-CTTTATTA---AC-TT-TG-TT--AATTCAAGTTCGAATA
gi|17 : gGAT-AAAATGGA----ACG-ACATCTACGCCGT-TT-ACCAAATCAG-C-CTGCCAGTGATA-TTGGCGGA-TT-------------AA-CTAACACG-TG-G----AACAACAT---------------------CCATCAAG-C------------------C----AGTGGCAT-C-AATGATGCGCTGTTTTC-AAACATGCGTGAATGCAATTGGTG-------------GTCACAC--------------G-CGTTATTA---AC-TT-TT-TA--AATTTAAGTTTGAATAccagtgtctttcgagtgttctgaaaatgacgttattcgacgttcacattaatggattataaaattctattacgactacatttgttaagtgttaaaatttgttcatcgttattttttattattattttcatatttcaaataatgcacagttcgttttta
gi|18 : -C-CCGA-T-CA-------G------CTCTG-G-CGTCCCCGTGA------TGCGATGCG-AAATTAGC-TTGG-T-GTAAGA-GGCATCGTCGTTTCAAGAA----AAGATTGGACGGATATTCTATAT------T--C-GAAC-GAGT-CGAAA---CAT--C--------TCGACAGCAT-TGAGG--GTCGTGTTTGCGCTTACCGT---TGTTCCGAAGAACGTTACATTCAATGACATCTG-TGT-----------TATTC-AGCGCC--ACCAA-TTCGTCGGAAGGAGCGCTTATGGTCTGCTGTGGAATTA-CAACACAT-G-G--A---AG-G-ACCCtcagtgtctttcgagtgtgctgaaattgaccttattcgacgttaacattaatggattattaaattgttgtagcgaattaatttgttataatagtattgcaaaacaataaaaaaaaattcattg
gi|19 : ctgctatctgtCT-AGGCTAGC-GTGG-T-GCAGAG-GTCATCTGCGATTCA-GAATA-CAGGACTGGGCCAATATTCTGTTC------A--C-TGAT-GAAT-CCAGATCTCAT--T--------TGGATAGCAG-TGAAG--GCTGTTGTAGAGCGTATCGT---TTGGTTGGGGAGCGGTGC---TAG-GATGTTTG-TGT-----------TGTGC-AACGTC--GATAA-TTCACTGGAGGTAGCA-TAATGGCGTGGGGTGGAATAA-CAG--CACGT-G--A---AAGG-ACTCCTC
gi|2 : GAACACATGTTGTTTATTG-AAGTA----TTCGT-CGCCAC-GAGTT-----------A-ACTGGTTGGA-GTA-AGAATTCGAAGTG-TAAAAAGGATT-C-TTGGA--CACTATTCGTT-AAGGAAATCACT-TT---AGCATGT--TTAGTTTTGACAAAAT--ACCCTT-CTGTCATGCCACGACTTCCAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGGGATG-CTTCAAGCTGGAAT-G-CATAACATAATCATAGCAAAAC----TTGGCAGTTCATCAG---AAGGAACACGCATCCAAGTCGATTACGGAGACGTTTCTCAAC-AATC---TG-TAACAAT-CGAAA--TCGACCCACATTCTGGGGCGTCCTCG-TGTGAATCAT--CACGTCA------ACAGG-ACAAACCACATTAGGAC--------GTGCACCCG----AGAAATATATTTTT----------------------CCCCCCCCCCCCCCCCCCTAGGCAGCAAGTTT-ACTGC-TCGTAATATTCCTGGAAC-TTGGACCAACCAATCCAAGAACT-CG-GTAATTCGTCTGT-TGGGCACAACATCAGACCA-GACGTCCAGCG-TGCGTC-CCAA-CACTAGTCCTTG------CTTCA-A--GTCATAGT-AA-----T----CGCT-AGACTAGCCATGG-GAGCAGAC-GACATCGGCCATTCA-GAATA-TAG--------CAGT--TCTGTTC------AAACATGAT-GAAT-CCAGATTTCAT--A---------GAATGGC-G-TG-----TCCGTTGTAGATAACA-CGT---CGCGTTGGGGAGTGGTAC---CAG-GACGCTCG-TGT-----------TGTGCCAACGTC--GAACA-TTCGGTGGAGGT-------------TGGG-TGGAATAA-CAGC-T---------------------CT-TACAAAT--TGT-------AA-TGG------AAAT-C--TCACCGGCGTAACGC-TATC-G--A---GAAATACA-TTCAG-CCGC-CATTGT---AC----ACCCTT-CA-----G-AGACGGCAAAATCACATTACATC---AGCAAGA-AACGCAAGACCACATAGTTG-CCACGGT-GT-AGCCATGGAATTTT--TTTG-TTCAACAGA-ATGA-T-CG-----------ATGTCTGGTCCATGTCTTGCCTTGGCCAAGCTGTTT-TCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATGG-----ACG-ACGTCTACGCCGTCTT-ACCAAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAG--CTTAA-CCAACCTCTTG-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTAATAACTT----T----AGTGGCAT-CAAATGAGGCGCAGTTATCAAAGCAT------ATT--AATGGTGTTACACCCCGCCAGTCACAC--------------GACGTTATTATATAC-TTATGATT--AATTCATGTTCGAATA
gi|20 : TG-------------GTTACAT--------------G-CGATATTA---AC-TT-TG-TT--AATTCAAGTTCAAATAtccagcgtctttcaagtagtgctcgaaattgaggtt
gi|22 : aATAAAGGTGC--TTGTTTTT-AACAATATC-GATAGTATCCGATCTCAGATttattgtctttcgagtgtgctgaaattgacattaatggattatgaaatgttgtaacgaatacgtctgttgaaagtatcacaaaaataaaatttgttcattaagttttatataatttcatatataaaaaacacacggtttctttttctgctagtatatttag
gi|23 : aagaaaatattctaagtataactggcggaaaaagaaactgctgcattagaaatttagtatatttttccccttaatttattgtttatatttatagactattgtttatatttataatcttaacaatcgATAAGG-TGACTT-GTTTT--AACAATATC-GATAGTATCCGA-TT
gi|24 : ataactggcggaaaaaagaaacttgctgcatagaaatttagtataatttccccttaatttattgtttatatttatagactattgttatttatttaataatcataaacaatcgATAAGGGTGA--T-GTTTCTGAATAACATTTGATAGTACCCGA-CCGAGATGTACG--GACATTTTTGATGGTTA---------GTGAACACATG
gi|25 : aaactttttttgtccagtatatatacaaaatataaacattcgCAGAC-GTCATCTGAGATTCACGCATG-C-GGACTGGAGTAGAGTTATCTTC------A--C-CGAC-GAGT-CCAGGTTaagtgt
gi|3 : tgggcGAACACATGTTGTTTATTGCAAGTAA---TTCGTACGC-CCAGAGTT-----------A-ACTGTT-GGA-GTA-AGAATTCGAAGTGGTAAAA-GGATTCTGTTGGA--CACTATTCGTTTAAGGAAT-CAACTTT---AGCATGT--TTAGTTTTGACAAAAT--ACCCTTTCTGTCATGCCACG-CC--CAGCAAAAAACCAA------CGTG--AATCGTGCTGTTGG-ATG-CTTCAAGCTGGAAT-G-CATAACATA-TCATAGCAAAAC----TTGG-AGTTCATCAAGGAAA----CAC-CACCAA-GTCGATTACGGAGACGTTTCGCAACCAATC---TGGTAACAAT-CAGAAAATCGACC-ACATTCTGGG-C-TCCTCG-TGTGAT-CAT--CACGTC-------ACAGG-ACAA-CCACATTAGGAC--------GTGCACC-G----AGAAATA--TATTTTTCCCCCCCCCCCCCCCCCCCCCC-----------------AGGCAGCAAGTTTTACTGC-TCGTAAT-TTCCTGGA-CCTTGGACCAACCAATCCAAGAACTGCG--TATT-CGTCTGT-TGGGCACAACATCAGACCAAGACGTCCAGCG-TGCG-CACCAAGCACT-------GTCCTTGCTTCACA-CGTCATAGT-A------T----CGCTCAGACTAGCCATGGAG-GCAGACAGACATCGGCCAT-CA-GAATAATAG--------CAGT--TCTGTTTTTCAAAA--C-TGATTGAATTCCAGATTTCAT--------------A-AGCAACTGGCGTTGTCGTTGTAGATAACA-CGT---C-CGTTGGTGAGTGGTAC---CAG--ACGCTCG-TGT-----------TGTGCCAACGTC--GACA--TTCGGTGGAGGT--------TGG-GTGGA----AATAA-CAGC------------------------TCTACAAAT--TGT------CAAATGG------AAAT-C--TCACCGGCGTA-CGCTTATC-G--A---GAAA--TA-TTCAGCC-GC-CAT--TGT-AC----ACCCTT------CAG-AGACGGCAAAATCACATTACAT---CAGCAAGAAAACGCAAGACCACAT-ATTGCC-ACG-T-GT-AGCGC-TGGAATTT--TTAG-TTCAACAGA-ATGTAT-CGATGTCTGGTCCATGT-----------CTTGCCTTGGCCAAGCTGTTTTCCC-CGA--TTAATCGCCGATCGAAC--ACGTCTGAGATG-AAATGGA----ACG-ACGTCTACGCCGTCTT-ACGCAATCAG-C-C----AGTGACA-TTGGCTGATTTTAAGCCAGGCTTTAA-CCAACCTC-TT-A----A-CAACAT--------------------TCCCTCAAGCCATTTCTGAATACTT----T----AGTGGCATCC-AATGAGGCGCAGTTATC-AAGCAT------ATT--AATGGTG-------------GTTACACCCCGCCAGATCACAG-CGTT-TTATATACATT-TGATT--AA-TCATGTTCGAATAcaatctacggcgaacggatgggcaaaaccgtttctatcgaaagggagaacgc
gi|4 : GA--TCGACC-ACGTTCTGGG-CGTCCTCG-TGTGG--TATTCCTCGTCCTCTTTTACAGG-ACAA-AAACATTAG-ACT------TTTGCACCTG----GGGAAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACT-------AGCATTCCTGGA-C-TTCGACCAATCAGTCCAAGAACTGTGCGTAAA-CGACTGCACGAGCACAACACCAGAACAAGATGCCCAGCGGCGCG-C-CCAA-TACT-------G------CTTCA-A-CGGCATTGT-A------T----CGCT-AGACTATC-GTAG-T-GCATAC-TACATCTGCGATTTA-GAATA-CAGGACTGGGCCAATAATCTGTCC------A--C-TGAT-GAAT-CCAGGTTTCAT--T--------TGAATAGCAG-TGACA--GCCGATGTAGAGTGTATCGT---CTCGTTGGGGAGCGGTAC---CAG-GACGCTTG-T-T-----------TGTGT-AACGTC--AACAA-GTCGGTGGTGGTAGCG-TTATGGTGAGTGGTGGAATAA-CAG--CACGT-G--G---A--------CTCTACAAAT--TGT------CAA-TGG------AAAT-C--TCACTGGCGCA-CGG-TATCAA--A-ACGAAAT-TA-TTCAG-C-GC-TAT-GTG--AT----ACCCTT-CCT-ACAG-AGACAGCTTAATCACATCTC-TCTGCAGCAAGACACCGTAAGGCCACAT-GTTG-C-ACG-T-GT-AGTCA-GGGGCTTT--TTTG-TTCAACAGA-ATG--T-CG-----------ATGT-----------CTTGCCTTGGCC-AGCTGTTTCCCC-AGA--TTTATCGCCGATAGAGC--ACGTCTGGGATG-AAATGCA----ACG-ACGTCTA---CGT-TT-ACCAAATGTG-C-C----AGTGAAATTTGGCTTC-TTTAGGCCAGGCTTCAC-CCAAGATC-AG-ATTCTA-TAATGT--------------------TC-----AA-CATCCCTAAACATTT----T----AGTGTCAT-C-AATGAGGCGCCGTTGTC-AGGCCTGCGTGAATGCAAATGGTG-------------GACACAC--------------G-CAATATCA---AT-TT-T--TTAAAATTCAAATTCGAATccagcgtctttcagtagtgcgaaattgagcg
gi|5 : ATAAAGACGA--T-GTTTTTGAACAATATCGGATAGTACCCGA-CTCTGATGCACGCGGAC-GTTTTCTTGGTTAGT---------GAACAC--GTTGTTTATTG-AAGAG----TTCGTACAC-AT-GAGTTTTA-CTGGCCAATACTGTTTGTA-GTA-GGAA------GTA-TAAAA-TGTTTGT-TTGGA--CACTATTCGTT-ACGGAAA------------GCAC-A--TTAGTTTTGACACAAGTTACCCTT-CTGCCATGCCACGACT--CAACGAAAA-GCAA------TGT---AATCGTGCTGTTGGGATG-CTTCAAGTTGGAAT-GACACAA---A-T--TAGCAAATCAC-TTTTG-AGTTCATTAG---AA----TAT-CATCCG-GTC-ATTATGGAGACGTTTC-CAAC-AACC---TGGTAACACT-CGGGA--TCGACC-ATGTTCTGGG-CGTCCTCG-TGTGA--CGT--CGCGTCG------GCAGG-ACAT-CCACAATAG-ACT------TGTGCACCTG----AGAAAT---CGTTT----------------------CC-------------------------AGTTTGACTGC-TCGTAGC-TTCCTGGA-C-TTCTACCTATCAGTCCGAGAACTGCAAGTAAT-CGTCTGAGCGAGC---ACATCTGACCAAACCGTCCTGCGGTGCG-C-CCAA-TACT-------G------CTTCA-A-TGTCATCGT-A------T----CGCA-AGACTAAC-GTGG-T-GTAGAC-AAC-------ATTCA-GAATA-CAGTACTGGACCAATATTTTGTTC------A--C-TGAT-GAAT-C-------CAT--T--------TGGATAGCAG-TGACG--A--G-TGTAGAGTGTATCGT---CGCGTTGGGGAACGGTAC---CAG-GATGCTTG-TGT-----------TGTGC-AACTTT--GACAG-TTTGGTGGAGGTAGCG-TTAT-G-GTGGGGTGGAATTA-CAG--CACGT-GGAA---A--G-ACCCCTCTACAAAT--TAT------CAA-TGG------AAAT-C--TCACCCGCGTA-CGC-TATC-G--AGATGAAAT-TA-TTCAG-T-GT-CAT-GTG--AT----ACTCTT-CAT-ACAA-AAACAGCAATAGCACATCAgccagtgtctttcgagtgagctgaaataggcgttattcaacgttaaaattaatgggttatgaaatgttggaacgaatacatttgttaacagtattacaaaaaacaaaatatgttcattgttatactttattatcttttttttccatatatcaaataatgcacagtttcttttttcctctggtatatctttaatctgctttataatgcagagttttgttcattttcaaacattgcggcaacgtagaa
gi|6 : tgaaacaagtagttagaaatagaatatatactagcggaaaaagaaactgtgcattatgaaatttagtataatttttctatatctattgtttatatttataaaatctaaacaattgA-TTCC-------G------TTTCA-AACGTCATCGT-AATCGGAT----CGCT-AGACTAGC-GTGG-T-GCAGAC-GACATCTGCGATTCA-GAATA-CAGGACTGGGTCAATATTCTGTTC------A--C-TGAT-AAAT-CCAGG-TTCAT--T--------GTGATAACAA-TGGCG--GCCGTTGTAGAGTGTATCGT---CGCTTTGAGGAG------------------TTG-TAT-----------TGTGC-AACGTA--GACAA-TTCTATGGAGGCAGTT-TTTTGA-TTTGGGTGGAAAAA-CAGC-TTG-TGG--A---A--GTACCCTTCTAAATAT--TTT------CAA-TGG------AAAT-T--T----GGC-T----C-TTT---------GATAC-TT-TTCA--C-AC------TG--AG----ACC-----------G-AAAAATCAA-ATCAC------TCTGCAACAAGTCAACGCAAGACCACAT-GTTG-C-ACG-T-GT-AGGCA-GGGCCTCT--TTTG-TTCGATAGA-ATG--T-CG-----------ATGT-----------CTTGCCTTGTCC-AGCTGTTTCCAC-CGA--TTTCACACTAATCGAGC--ACTTCTGGAATGAAATTGAACGACACGTACATCTACGCCGT-TC-ACCAAATCAG-C-T----AGTATCA-TT-------TTCTGGTCAGACTTTAA-CCAACACC-TGTA----A-CAACAT-----------------------CTCAAA-TATGTCTGAACACTTTAAAT----AGTGGCAT-G-AATGAGGCGCCGTTGGC-AAGCATGTGTACATGCAAATGGTG-------------GTCACAC--------------G-CACTATTA---AC-TT-TG-TT--AATTCAAATTCGAATA
gi|7 : ttgt-TATC-G--AGACGAGAT-TA-TTCAG-C-ACATAT-GTG--AT----ACCCTT-CAT-ACAG-AGA-AACAAA-TCACATAGC-TTT-CAACAAAACAATGCAAGGTCACAT-GTTG-C-ACG-T-GT-AATCA-GGG-CTTT--ATTG-TTCAATAGA-ATG--T-CG-----------A-GT-----------CTTGTCTTGTCC-AGATGTTTCCCC-CGA--TTTATCGCCGATCAAAC--ATGTCTTGGATGAAAAT-GA----ACA-ACAT----------------AAGTCAA-CGC----AGTGTCA-TTGGCTGA-TTTCGGCCTGACTTTAATCCACCATC-TG-G----A-CAACAT--------------------TCCCACAA---ATTCCTGAGTACTT----T----AGTGGCAT-C-AATGTGACACCAATATC-AAACATGGCTAAATGCAAATGGTG-------------GTCAGACG-------------G-CGTTATTA---AC--T-TG-TT--AATTCAAGTT-GGATActactgccgtacgaatgtgctaaaattgacgttattcgacgttaatattgatggattataaatt
gi|8 : AATATCGGATAGTACCCGA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT---------GAACACATGTT---TATTG-AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATACTGTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-T-GGA--CACTACTCGTT-GAGGAAAGCAG--TCGGAAGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA-ACAA------TGT---AATCGTGCTGTTGGAATG-CTTCAAGCTGGAAT-GGCTCAATATA-TCGTAGCAAGACAC-TTTGG-AGTTCATCAG---AA----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTAACATTCCGGGA--TCGACC-ACGTTCTGGG-CGTCCT-G-TGTGA--CGT--CGCGTCG------ACAGG--CAA-CCACATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAGTTTGACTGC-TTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGTCCAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGtaatggctttagattgtggctaaattgacgttattcgacattaacattaaataatttatgaatgctgtaacgaatataatttgtttattgttatttttaaattattttcttcatatattaaattaaagtaatacacattttctttttttttttttcgctagtatacatgtataatggcagccaaattttcttactctctgtttgaagtgcatgcaatgtagaa
gi|9 : ATATCGGATAGTACC-GA-CCCAGATGCAAG--GAC-TTTTTCATGGTTAGT---------GAA-ACATGTT---TATTG-AAGTG----TTCGTACGC-AT-GAATTTTA-CTGGCCAATAG-GTTTGGA-GTA-AGAA------GTG-TAAAA-GGTTTGT-T-GGA--CACTACTCGTT-GAGGAAAGCAG--TCGGAAGCAC-T--ATAGTTTTAGCAAAATTTACCCTT-CTGTCATGCTACGCCT--CAGTGAAAA---AA------CATGTAAATCGTGCTGTTGGAATG-CTTCAAGCTGGAATTGGCTCAATTAA-TCGTAGGCAGACACGTTTGG-AGTTCATCAG---A-----CAC-CATCCA-GTC-ATTATCGAGACGTTTC-CAAC-AATC---TGGTAAT--T-CGGG---TCGACC-ACGTTCTGGG-CGTCCTTG-TGTGA--GCT--CGCGTCG------ACAGG-ACAA-CCA-ATTAG-GCT------TGTGCACCTG----AG-AAT---CGTTT----------------------CC-----------------AGACAGCAAG-TTGACTGCTTTGTAGCATTCCTGGA-C-TTCACCCAATCAATCGTAGAACT--GCGTAAT-CGTCTGCGCGAGCACACCATCAGACGAAGACGT-CAACAATGCA-C-TCAA-TATT-------A------CTTCA-A-CGTTATCGT-A------T----CGCT-AGACTAGC-GTGG-
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|21 ): ACTTTGTTGATTTAAATTCGAATACTAGTGTCTTTCGAGTGTGCTGAAATTAACGTTATTCAACGTTAACACAAATGGATTATGAAATGTTGTGACGAATAAATTAATTTTGTTTTAAAACAGCATTAAAAAGTAAAATTTGTTCATTGTTATTTTTTTTTTTTATTATTATCTTTT
Unaligned ( gi|26 ): AACAGTGCGTGTTGTATTCGTACATACTCTTGTGCGAATAAGTTGCATCTACACCTGCATTTTTAATTGCCACCAATTCAATAGAGGGGACGATATGGTCTGGGAAGAATTACAACATATG
Unaligned ( gi|27 ): AGTTTGTTGCAAAATAATTCCAAGTCCGAATACCAATGTCTTTCGAGTGTGTTGAAATTGACGATATTCGACGTTAACATTAATGGATTATGAAA
Unaligned ( gi|28 ): CATTTCAAGAATATCACGATTGGGCGAAAATTCTTTTTACGGAGGAATCTTGACAGCAGTACCGGTCGTGTTTGGGCTTCCGTCGTGCCGGAG