lowQualScore : 5555555555555555555555555555555555 1 1 111 1 22 111 111111 1 2222222222222 77777777777777777777777777777777777777777777777777777777777 1111 111 666666666666666666666666666 1
lowQualScore : 66 2 0000000000000000000000000000000000 44 6 3 1 3 0 0 7 111 5 88 2 777 4 777777 44 44 4 9999999999999 3 55 55 66666666666666666666666666666666666666666666666666666666666 55 0 4 5 9999 1 333 333333333333333333333333333 4 77777 5 66 5 4 5
lowQualScore : .. . .................................. .. . . . . . . . ... . .. . ... . ...... .. .. . ............. . .. .. ........................................................... .. . . . .... . ... ........................... . ..... . .. . . .
lowQualScore : 11 8 0000000000000000000000000000000000 66 0 3 1 8 5 2 7 888 0 99 0 111 8 444444 66 33 8 4444444444444 9 55 55 99999999999999999999999999999999999999999999999999999999999 55 1 4 0 7777 1 999 888888888888888888888888888 4 00000 0 99 0 0 0
consensus : TTCCGCTTCT--TTCTCGCGCCTA------A--------AAACTGTCCG-C--AGCCGTTC--TCCGTAACCCG-TTGATGAAAGTATTAGATATTCNAGGAT--ATGATAGGCCAATGTATCTAGATGT--GCAGAAATG-----TTTTTG--TTTT-CAGATTGAAGGGGGT----------T-AGGG--TAC--ATT------------T-TGGG-GG--------------------G------------A----TC--AAATGGG-GG-TGGGN--TTAACAT---AG-ANNT--C---T--GG---G-------GG-AAA--AN-TAAT-T--CCAA-ANTTCAACAG
Reference ( gi|7 ) : TTCCGCTTCT--TTCTTGCGCCCA------A--------AAACTGTCCG-C--AGCTTTTC--TCTGTAACCTG-TCGATGAAAGTGTTAGATATTCTAGGAC--ATGATCGGCCTTTGTATCTAGATGA--GCAAAAATA-----TTTTTG--TTTT-CAGAATGAAAGGGGC----------T-AAGG--TAC--ATT------------T-TGGA-GA--------------------G------------A----TC--AAATGGG-GG-TGGGG--TTAACAT---AG-ACGT--C---T--GA---G-------GA-AAA--AA-TAAT-T--CCAA-ATTTCACCAG
gi|3 : TTCTGTCTCT--TTTTCATGCCTA------A--------AA-CTGTCAGAC--A-CTTTTC--TCTGTAACCTG-TTGATGGAAGTCTTAGATATTCCAGGAT--ATGATAGGCCATTATATCAAGATGT--GCAGAAATA-----GCTTTG--TTTT-CAGATTGAAGGGGGT----------A-GAGGGTCCC--ATTGGGGGGGGGGGGG-TGGG-GG--------------------G------------GGGGCTC--AAATTGG-GA-TAGGGTTTTAACAT---AG-AACT--CTATT--GG---G-------GG-AAA--AT-TCAT-T--CCAA-A
gi|1 : gtctcgcaaataaattttggagatttgttgtttttgtttggttcttccacttcttcTTCCTCTTTT--TTCTTCCTTCCG------ACTTTTCTCGTACTGTCCAAC--A-CTTGTCGCTCCGTAACCTG-TTGA--AAGGTCTTCGATATTCTAG-AT--ATGATAGGCAAT-GTATGTAGATAT--GCAGAGATA-----TTTTTG--TTTT-GAGATTGAAGGGGGT----------TCAGGG--TAC--ATT------------T-TGGACGG--------------------C------------A----CC--AAAT-GG-GG-TGGGT--TTAACAT---AG-A-AT--C---C--AT---G-------GG-GAA--AA-TAAT-T--CCAA-Aat
gi|5 : aaacgaagtttggagactgagtgttttttgttcggTTCCGCTTCT--TCTTCGATACTA------A--------AAAC-GTCTG-C--AGCCGTTC--TCCGTAACCCT-TTGATGAAAGTATTAG----------------GATAAGCCAATGTATCTAGATGT--GCAGAAATGAAATGTTTTTG--TTTT-CAGATTGAAAGGGGGGGGGGGGGGGT-AGGG--TAC--ATT------------T-TG-A-GG--------------------G------------A----TC--AAATGGG-GG-TGGGT--TTTTCATGA-AG-AAGG--C------GA---A-------TA-TAACTAA-CAATAT--TC-A-ATTTCAacccaactgatgtaactttaattgataaatatgatatagatagtcacgaggtcttcgaaaaacgaaatgggtatatgatagtgggctacaacttagtgtcaagatcaagtttacatcttgacatctgatcatgaacataa
gi|9 : gtctctcaaactaagtttgaagacttattgttcTTCCGCTTCTACTTCTTTCACCCCCCCCTTA--------AAACTATCTG-A--AGTCATTC--TCTGTAACCTG-T---TGAAAGTATTAGATATTCAATTAT--ACGATAGGCCAATATATCTAAATGT--GCAGAAATG-----TTTTTG--TTTT-CAGATTGA
gi|15 : caaatctctgaaatgacaggttattaagtctttgctgggttttaattattgttattcTTCCGCCTCT--TTCTCGTGCCTA------A--------AA--TGTCTG-CAAAATTTTTC--TC-GTAAACTGATGGATGAAA
gi|14 : ttaagcatcgcaaaacgaaagtttggagacttatccacttccacCCGCTTCT--TTCTTGCGCCTA------T--------GAA-GGTCCA-C--AGCTGTTC--TCCGTAA-CTG-TTGAT-AAAGT
gi|8 : ctcccaaacgaagtttgcagacattgtttttgttccgcttttattgttcttgaaCTTCA--TTTTCGCGCCTA------A--------AAA-TGGCCG-C--AGCCGTGC--TCCTTAAGCCG-TTGAGGAAAGTATGGAATACTCAAGGAT--ATGATGGACCAATGTATCTATAGCAGTGCAGAAATG-----TTTTTA--TTTT-GAGATTGAAGGGGGC------------AGGA--TAC--ATT------------T-TTGA-GG--------------------A------------A----TC--AAaggcctaccggtaattgaccaa
gi|12 : gtctctcaaacgaagttttgagtcatattgttttagctcagttCTTCT--TTCTCGCGCGTA------A--------A-------------------TC--TCCGTAACCCA-T------------TAGATATTCAAGGGT--ATGATAGGCCAATGTAATTATTTTT--GCAGAAATG-----ATTTAG--TTTA-CAGATTGAAGGGGGT----------T-AGGG--GAG--ATT------------T-TCGG-GG--------------------A------------A----TC--AAAAGGG-G
gi|11 : ttattcttccgctttcttggtTTCT--TTCTTGCACCTA------A--------AA-CCAT--G-C--AGTCTTTC--TCTGTAACTTG-TTGATAAAAATATTAGATATTCCAAGTT--ATGATAGGCCAATGTATTTAGATGT--GCAGAAA
gi|10 : cctctcaaatgaagtttgaagactgattgtctttgcttgtctttgctcagtttttattattcttcagattcttacagctTCTCGTGCCTA------A--------ACACT---------------TC--TCCTTAACCTG-ATAATGAAAGTCTTAGTTATTCAAGGAT--ACGATAGATCAATTTATGTACATGT--GCAGAAATG-----TTTTTG--TTTT-CAGATTGACAGGGGT----------T-GTGG--TAC--ATT------------CCTGGC-G---------------------G------------A----TC--AAATGGG-GG-TGGAA---TAACGT---AA--------------GG---G-------GG-AAA--AA-CAA
gi|6 : TTTTC--TCAGTAACTTG-ACT-T-----TCTTAGATATTCTAGGAT--ATGATAGGCCAATGTATATAGATGT--GCAGAAATG-----TTTTAG--TTTT-TAGATTGAAGGGGGcacaaaaatcccc
gi|2 : taacatTTC--TCCGTAACC-G-TTGATGAAAGGATTAATTATGCAAGGATTTATGA-----------ATCTAATTGC--GCAGAAATGGT---TTTTTAATTTTTGCAGATTGAAGTGGGT----------T-AGGG--TAC--ATT------------T-GGG----------------------------------------------AAATAGG-GA-TGGGGC-TTAACTC---AG-AAGT--C---T---A---GCTGTTGTGG-AAA--TT-TAGC-T--CCAA-AATTCAggggggggaaacagtcctctaaggggaaaaattaattctaaaattcaacagatgtaacttgttaaatatgatagatctttagaaatgagaaggggatgatggggcctactcaggtaactttgacctctgaccatgaacat
gi|4 : ttcttgaaatttgttttccgttacgtcgTTAGATATT-TAGGAT--ATGATAGGCCAATGTATATAGATGT--GCAGAAATG-----TTTA-G--TTTT-TAGATTGAAAGGGGaagatacatgtatatcttgacaaatatgatagacaggttcttatagggtcttcaaaaaggagaagagaatgacagggccaaaattctagaatgaaggtcaagggacctccatgatatttatttctgaccatgaacat
gi|13 : cttttgatttttccatatgatcattatacacggtctaaacatttttctcagtactgactttcTGA--GTAAC--TG-----TTTTTG--TGTT-CAG-ATTAAAGGAGT----------T-AAAG--TACATATT------------T-TGGG-GGTGGGTGGTGGTGGTGGTGGTG------------T----TC--AAATGGGTTG-TGG-----TAAAATCTAAG-AC----C---T--AATTGG-------GA-AAA--AATTAAT-T--CCAACATTggggggggtaagtcctctaggggaaaaataattaattctaaaaattcaagctaataacttgtttaaatatgatagatctttagaaatgagaaggggatgaggggctactcaggtaactttgacctcttgacctgaaacatataaattag
gi|16 : agggcaacatatggagatgTTTTG--TTTT----GTTGAAAGGGAG----------T-AGGT--TAC--AAT------------T-TGGC-G---------------------G------------A----TCCAAAATGGG-AG-GGGGT--TTAAAAT---AG-ATAGAAC---T--GA---AT------GACAAG--AA-TAAT-CAATCAA-AT
gi|17 : GG--TAC--ATT------------T-TGGG-GG--------------------GGGGGGGGGGGGGA----TC--AAATGAG-GGATGAGT--CTAACAT---AGTACTT--TA--T--GG---G-------GG-GAA--AT-TAAT-T--CCAA-AATTTAc
gi|6 : aggGGGG--GGAA-AC---AG-TCCT--C---TAAGG---G-------GA-AAA--AT-TAAT-T--CTAA-AATTCAACAG
Alignments
lowQualScore : 111111111111111 1111 1111111111 1111 111111111111 44444444444444444444444444444444444444 1111 22222222222222
lowQualScore : 4 55 0 666666666666666 3 3 666 1111 0 2 2 44 77777 3 44 44 33 4444444444 3333 3 44 0 555555555555 1 3 77777777777777777777777777777777777777 44 3 3 3 4444 1 666 88888888888888 55 8888 777 1 777 55 1
lowQualScore : . .. . ............... . . ... .... . . . .. ..... . .. .. .. .......... .... . .. . ............ . . ...................................... .. . . . .... . ... .............. .. .... ... . ... .. .
lowQualScore : 4 00 5 888888888888888 1 1 444 2222 2 2 1 22 77777 1 66 22 22 6666666666 4444 1 22 5 888888888888 5 1 22222222222222222222222222222222222222 22 3 6 6 2222 4 444 22222222222222 55 5555 000 0 000 55 0
consensus : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG-TTGA--TGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-ACCT--C---T--GG--G----GGAA---AANTAAT---TCC--AAAATTCAACAG
Reference ( family-3079 ) : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCCG-TTGA--TGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--NTTAACAT---AG-ANNT--C---T--GG--G----GGAA---AANTAAT---TCC--AAANTTCAACAG
gi|1 : TTCCGACTT--TTC--TCGT--------ACTGTCCAACACTTGTCGCTC-CGTAACCTG-TTGA----AAGGTCTTCGATATTCTAG-ATATGATAGGC-AATGTATGTAGAT--ATGCA-----G-AGATA--TTTTTG--TTTT-GAGATTGAA----------GGGGGT-TCAGGGT-AC--ATT------------TTGGACGG--------------------C------------A----CC--AAAT-GG-GG-T-GGG--TTTAACAT---AG-AATC--CA--T--GG--G----G--A---AAATAAT---TCC--AAAACCCAAC
gi|10 : aaacgaagtttggagactgagtgttttttgttcggttcctcttttttcttccTC--TCGTGCCTAAACACT-------------T-CTC-CTTAACCTG-ATAA--TGAAAGTCTTAGTTATTCAAGGATACGATAGATCAATTTATGTACAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAC----------AGGGGT-T-GTGGT-AC--ATT------------CCTGG-CG--------------------G------------A----TC--AAATGGG-GG-T-GGA--A-TAACGT---AA--------------GG--G----GGAA---AAACAAC---ACA--AAAATCCtgatgtaactttaattgataaatatgatatagatagtcacgaggtcttcgaaaaacgaaatgggtatatgatagtgggctacaacttagtgtcaagatcaagtttacatcttgacatctgatcatgaacataa
gi|11 : TTCTTTC--TTGCACCTAAAA-CCAT--G-CAGTCTTT-CTC-TGTAACTTG-TTGA--TAAAAATATTAGATATTCCAAGTTATGATAGGCCAATGTATTTAGAT--GTGCA-----G-AAAcc
gi|12 : cctctcaaatgaagtttgaagactgattgtctttgcttgtctttgctcagtttttattattcttcagattcttacagct-CTTCTTTC--TCGCGCGTAAA-----------------T-CTC-CGTAACCC---------------ATTAGATATTCAAGGGTATGATAGGCCAATGTAATTATTT--TTGCA-----G-AAATG--ATTTAG--TTTA-CAGATTGAA----------GGGGGT-T-AGGGG-AG--ATT------------TTCGG-GG--------------------A------------A----TC--AAAAGGG-G
gi|13 : ttattcttccgctttcttggtAGGGCAACATATGGAGAT--GTG-A-----GTAACTG--TTTTTG--TGTT-CAGATT-AA----------AGGAGT-T-AAAGT-ACATATT------------TTGGG-GGTGGGTGGTGGTGGTGGTGGTG------------T----TC--AAATGGGTTG-T-GG-----TAAAATCTAAG-ACCTAAT---T--GG--G----AAAA---AATTAAT---TCC--AACATT
gi|14 : CCG-CTTCTTTC--TTGCGCCTATGAAG-GTCCA-CAGCTGTT-CTC-CGTAA-CTG-TTGA--T-AAAGTA
gi|15 : ctcccaaacgaagtttgcagacattgtttttgttccgcttttattgttcttgaaTTCCG-CCTCTTTC--TCGTGCCTAAAA--TGTCTG-CAAAATTT-TTCTCGTAAACTGATGGA--TGAAAggcctaccggtaattgaccaa
gi|16 : ttaagcatcgcaaaacgaaagtttggagacttatccacttccacTTTTG--TTTT----GTTGAA----------AGGGAG-T-AGGTT-AC--AAT------------TTGGC-GG---------------------------------A----TCCAAAATGGG-AG-G-GGG--TTTAAAAT---AG-A
gi|17 : GGGT-AC--ATT------------TTGGG-GG--------------------GGGGGGGGGGGGGA----TC--AAATGAG-GGAT-GAG--TCTAACAT---AGTACTT--TA--T--GG--G----GGGA---AATTAAT---TCC--AAAATTTAtagaactgaatgacaagaataatcaatcaaatc
gi|2 : agGTCGTT-CTC-CGTAACC-G-TTGA--TGAAAGGATTAATTATGCAAGGATTT---------ATGAATCTAATT--GCGCA-----G-AAATGGTTTTTTAATTTTTGCAGATTGAA----------GTGGGT-T-AGGGT-AC--A-T------------TTGGG---------------------------------------------AAATAGG-GA-TGGGG--CTTAACTC---AG-AAGT--C---T--AGCTGTTGTGGAA---ATTTAGC---TCC--AAAATTCAA
gi|3 : ttcttgaaatttgttttccgttacTTCTG-TCTCTTTT--TCATGCCTAAAA-CTGTCAGACA-CTTTT-CTC-TGTAACCTG-TTGA--TGGAAGTCTTAGATATTCCAGGATATGATAGGCCATTATATCAAGAT--GTGCA-----G-AAATA--GCTTTG--TTTT-CAGATTGAA----------GGGGGTAG-AGGGTCCC--ATTGGGGGGGGGGGGGTGGG-GG--------------------G------------GGGGCTC--AAATTGG-GA-T-AGGGTTTTAACAT---AG-AACT--CTATT--GG--G----GGAA---AATTCAT---TCC--AAAAagatacatgtatatcttgacaaatatgatagacaggttcttatagggtcttcaaaaaggagaagagaatgacagggccaaaattctagaatgaaggtcaagggacctccatgatatttatttctgaccatgaacat
gi|4 : gtctcgcaaataaattttggagatttgttgtttttgtttggttcttccacttcttcTTAGATATT-TAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG--TTTA-G--TTTT-TAGATTGAA----------AGGGG-----------------------------------GG--------------------G-------------------------GGG-GG-T-AAG--T--------------CCT--C---T--AG--G----GGAA---AAATAATTAATTCTAAAAATTCAA
gi|5 : cttttgatttttccatatgatcattatacacggtctaaacatttttctcagtactgactttcTTCCG-CTTCTTCT--TCGATACTAAAAAC-GTCTG-CAGCCGTT-CTC-CGTAACCCT-TTGA--TGAAAGTATTAG--------------GATAAGCCAATGTATCTAGAT--GTGCAGAAATG-AAATG--TTTTTG--TTTT-CAGATTGAAAGGGGGGGGGGGGGGG-T-AGGGT-AC--ATT------------TT-GA-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTTTCAT---GA-AGA----------AG--G----CGAATATAACTAA------C--AATATTCAAgctaataacttgtttaaatatgatagatctttagaaatgagaaggggatgaggggctactcaggtaactttgacctcttgacctgaaacatataaattag
gi|6 : gtctctcaaactaagtttgaagacttattgttcTT-CTC-AGTAAC----TTGACTT-----TCTTAGATATTCTAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG--TTTTAG--TTTT-TAGATTGAA----------GGGGG-----GG------------------------GGG-GG--------------------G------------A-----------------------------AAC-----AG-TCCT--C---TAAGG--G----GAAA---AATTAAT---TCT--AAAATTCAACAGtttca
gi|7 : taacatttTTCCG-CTTCTTTC--TTGCGCCCAAAAACTGTCCG-CAGCTTTT-CTC-TGTAACCTG-TCGA--TGAAAGTGTTAGATATTCTAGGACATGATCGGCCTTTGTATCTAGAT--GAGCA-----A-AAATA--TTTTTG--TTTT-CAGAATGAA----------AGGGGC-T-AAGGT-AC--ATT------------TTGGA-GA--------------------G------------A----TC--AAATGGG-GG-T-GGG--GTTAACAT---AG-ACGT--C---T--GA--G----GAAA---AAATAAT---TCC--AAATTTCACCAGatgtaacttgttaaatatgatagatctttagaaatgagaaggggatgatggggcctactcaggtaactttgacctctgaccatgaacat
gi|8 : -CTTCATTT--TCGCGCCTAAAAA-TGGCCG-CAGCCGTG-CTC-CTTAAGCCG-TTGA--GGAAAGTATGGAATACTCAAGGATATGATGGACCAATGTATCTATAGCAGTGCA-----G-AAATG--TTTTTA--TTTT-GAGATTGAA----------GGGGG--C-AGGAT-AC--ATT------------TTTGA-GG--------------------A------------A----TC--AA
gi|9 : gtctctcaaacgaagttttgagtcatattgttttagctcagttTTCTA-CTTCTTTCACCCCCCCCTTAAAACTATCTG-AAGTCATT-CTC-TGTAACCTG-TTGA-----AAGTATTAGATATTCAATTATACGATAGGCCAATATATCTAAAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGA
Alignments
lowQualScore : 111111111111111 1111111111 1111 111111111111 44444444444444444444444444444444444444 1111 111 3333333333333333
lowQualScore : 4 55 0 666666666666666 3 3 77 66 0 2 2 44 77777 3 44 44 33 4444444444 3333 3 44 0 555555555555 1 3 77777777777777777777777777777777777777 44 3 3 3 1111 1 111 5555555555555555 55 777 1 777 55
lowQualScore : . .. . ............... . . .. .. . . . .. ..... . .. .. .. .......... .... . .. . ............ . . ...................................... .. . . . .... . ... ................ .. ... . ... ..
lowQualScore : 4 00 5 888888888888888 1 1 33 88 2 2 1 22 77777 1 66 22 22 6666666666 4444 1 22 5 888888888888 5 1 22222222222222222222222222222222222222 22 3 6 6 9999 4 444 9999999999999999 55 000 0 000 55
consensus : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-A--CCT--C---T--G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
Reference ( family-3079 ) : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-A--CCT--C---T--G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
gi|1 : TTCCGACTT--TTC--TCGT--------ACTGTCCAACACTTGTCGCTC-CGTAACCTG--TTGA--AAGGTCTTCGATATTCTAG-ATATGATAGGC-AATGTATGTAGAT--ATGCA-----G-AGATA--TTTTTG--TTTT-GAGATTGAA----------GGGGGT-TCAGGGT-AC--ATT------------TTGGACGG--------------------C------------A----CC--AAAT-GG-GG-T-GGG--TTTAACAT---AGAA--TCC--A---T--G--GGG--A---AAATAAT---TCC--AAAACCCAAC
gi|10 : aaacgaagtttggagactgagtgttttttgttcggttcctcttttttcttccTC--TCGTGCCTAAACACT-------------T-CTC-CTTAACCTG--ATAATGAAAGTCTTAGTTATTCAAGGATACGATAGATCAATTTATGTACAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAC----------AGGGGT-T-GTGGT-AC--ATT------------CCTGG-CG--------------------G------------A----TC--AAATGGG-GG-T-GGA---ATAACGT---AA----------------G--GGGGAA---AAACAAC---ACA--AAAATCCtgatgtaactttaattgataaatatgatatagatagtcacgaggtcttcgaaaaacgaaatgggtatatgatagtgggctacaacttagtgtcaagatcaagtttacatcttgacatctgatcatgaacataa
gi|11 : TTCTTTC--TTGCACCTAAAA-CCAT--G-CAGTCTTT-CTC-TGTAACTTG--TTGATAAAAATATTAGATATTCCAAGTTATGATAGGCCAATGTATTTAGAT--GTGCA-----G-AAAcc
gi|12 : cctctcaaatgaagtttgaagactgattgtctttgcttgtctttgctcagtttttattattcttcagattcttacagct-CTTCTTTC--TCGCGCGTAAA-----------------T-CTC-CGTAACCC--------------ATTAGATATTCAAGGGTATGATAGGCCAATGTAATTATTT--TTGCA-----G-AAATG--ATTTAG--TTTA-CAGATTGAA----------GGGGGT-T-AGGGG-AG--ATT------------TTCGG-GG--------------------A------------A----TC--AAAAGGG-G
gi|13 : ttattcttccgctttcttggtAGGGCAACATATGGAGAT--GTG-A-----GTAACTG--TTTTTG--TGTT-CAGATT-AA----------AGGAGT-T-AAAGT-ACATATT------------TTGGG-GGTGGGTGGTGGTGGTGGTGGTG------------T----TC--AAATGGGTTG-T-GG-----TAAAATCTAAG-A--CCTAAT---T--G--GGAAAA---AATTAAT---TCC--AACATT
gi|14 : CCG-CTTCTTTC--TTGCGCCTATGAAG-GTCCA-CAGCTGTT-CTC-CGTAA-CTG--TTGAT-AAAGTA
gi|15 : ctcccaaacgaagtttgcagacattgtttttgttccgcttttattgttcttgaaTTCCG-CCTCTTTC--TCGTGCCTAAAA--TGTCTG-CAAAATTT-TTCTCGTAAACTGA-TGGATGAAAggcctaccggtaattgaccaa
gi|16 : ttaagcatcgcaaaacgaaagtttggagacttatccacttccacTTTTG--TTTT----GTTGAA----------AGGGAG-T-AGGTT-AC--AAT------------TTGGC-GG---------------------------------A----TCCAAAATGGG-AG-G-GGG--TTTAAAAT---AG-A--
gi|17 : GGGT-AC--ATT------------TTGGG-GG--------------------GGGGGGGGGGGGGA----TC--AAATGAG-GGAT-GAG--TCTAACAT---AGTA--CTT--TA--T--G--GGGGGA---AATTAAT---TCC--AAAATTTAtagaactgaatgacaagaataatcaatcaaatc
gi|2 : agGTCGTT-CTC-CGTAACC-G--TTGATGAAAGGATTAATTATGCAAGGATTT---------ATGAATCTAATT--GCGCA-----G-AAATGGTTTTTTAATTTTTGCAGATTGAA----------GTGGGT-T-AGGGT-AC--A-T------------TTGGG---------------------------------------------AAATAGG-GA-TGGGG--CTTAACTC---AG-AAGTCTAGC---T--GTTGTGGAA---ATTTAGC---TCC--AAAATTCAA
gi|3 : ttcttgaaatttgttttccgttacTTCTG-TCTCTTTT--TCATGCCTAAAA-CTGTCAGACA-CTTTT-CTC-TGTAACCTG--TTGATGGAAGTCTTAGATATTCCAGGATATGATAGGCCATTATATCAAGAT--GTGCA-----G-AAATA--GCTTTG--TTTT-CAGATTGAA----------GGGGGTAG-AGGGTCCC--ATTGGGGGGGGGGGGGTGGG-GG--------------------G------------GGGGCTC--AAATTGG-GA-T-AGGGTTTTAACAT---AG-A--ACT--CTATT--G--GGGGAA---AATTCAT---TCC--AAAATagatacatgtatatcttgacaaatatgatagacaggttcttatagggtcttcaaaaaggagaagagaatgacagggccaaaattctagaatgaaggtcaagggacctccatgatatttatttctgaccatgaacat
gi|4 : gtctcgcaaataaattttggagatttgttgtttttgtttggttcttccacttcttcTTAGATATT-TAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG---TTTAG--TTTT-TAGATTGAA----------AGGGG-----GGG---------------------------------------------------------------------------GGG-GG-T-AAG--T----------------CCT--C---T--A--GGGGAA---AAATAATTAATTCTAAAAATTCAA
gi|5 : cttttgatttttccatatgatcattatacacggtctaaacatttttctcagtactgactttcTTCCG-CTTCTTCT--TCGATACTAAAAAC-GTCTG-CAGCCGTT-CTC-CGTAACCCT--TTGATGAAAGTATTAG--------------GATAAGCCAATGTATCTAGAT--GTGCAGAAATG-AAATG--TTTTTG--TTTT-CAGATTGAAAGGGGGGGGGGGGGGG-T-AGGGT-AC--ATT------------TT-GA-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTTTCATGA-AG-A--------------A--GGCGAATATAACTAA------C--AATATTCAAgctaataacttgtttaaatatgatagatctttagaaatgagaaggggatgaggggctactcaggtaactttgacctcttgacctgaaacatataaattag
gi|6 : gtctctcaaactaagtttgaagacttattgttcTT-CTC-AGTAACTTGACTT--------TCTTAGATATTCTAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG--TTTTAG--TTTT-TAGATTGAA----------GGGGG-----GG------------------------GGG-GG--------------------G------------A-----------------------------AAC-----AG-T--CCT--C---TAAG--GGGAAA---AATTAAT---TCT--AAAATTCAACAGtttca
gi|7 : taacatttTTCCG-CTTCTTTC--TTGCGCCCAAAAACTGTCCG-CAGCTTTT-CTC-TGTAACCTG--TCGATGAAAGTGTTAGATATTCTAGGACATGATCGGCCTTTGTATCTAGAT--GAGCA-----A-AAATA--TTTTTG--TTTT-CAGAATGAA----------AGGGGC-T-AAGGT-AC--ATT------------TTGGA-GA--------------------G------------A----TC--AAATGGG-GG-T-GGG--GTTAACAT---AG-A--CGT--C---T--G--AGGAAA---AAATAAT---TCC--AAATTTCACCAGatgtaacttgttaaatatgatagatctttagaaatgagaaggggatgatggggcctactcaggtaactttgacctctgaccatgaacat
gi|8 : -CTTCATTT--TCGCGCCTAAAAA-TGGCCG-CAGCCGTG-CTC-CTTAAGCCG--TTGAGGAAAGTATGGAATACTCAAGGATATGATGGACCAATGTATCTATAGCAGTGCA-----G-AAATG--TTTTTA--TTTT-GAGATTGAA----------GGGGG--C-AGGAT-AC--ATT------------TTTGA-GG--------------------A------------A----TC--AA
gi|9 : gtctctcaaacgaagttttgagtcatattgttttagctcagttTTCTA-CTTCTTTCACCCCCCCCTTAAAACTATCTG-AAGTCATT-CTC-TGTAACCTG--TTGA---AAGTATTAGATATTCAATTATACGATAGGCCAATATATCTAAAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGA
Alignments
lowQualScore : 111111111111111 1111111111 1111 111111111111 44444444444444444444444444444444444444 1111 111 3333333333333333
lowQualScore : 4 55 0 666666666666666 3 3 77 66 0 2 2 44 77777 3 44 44 33 4444444444 3333 3 44 0 555555555555 1 3 77777777777777777777777777777777777777 44 3 3 3 1111 1 111 5555555555555555 55 777 1 777 55
lowQualScore : . .. . ............... . . .. .. . . . .. ..... . .. .. .. .......... .... . .. . ............ . . ...................................... .. . . . .... . ... ................ .. ... . ... ..
lowQualScore : 4 00 5 888888888888888 1 1 33 88 2 2 1 22 77777 1 66 22 22 6666666666 4444 1 22 5 888888888888 5 1 22222222222222222222222222222222222222 22 3 6 6 9999 4 444 9999999999999999 55 000 0 000 55
consensus : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-A--CCT--C---T--G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
Reference ( family-3079 ) : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-A--CCT--C---T--G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
gi|1 : TTCCGACTT--TTC--TCGT--------ACTGTCCAACACTTGTCGCTC-CGTAACCTG--TTGA--AAGGTCTTCGATATTCTAG-ATATGATAGGC-AATGTATGTAGAT--ATGCA-----G-AGATA--TTTTTG--TTTT-GAGATTGAA----------GGGGGT-TCAGGGT-AC--ATT------------TTGGACGG--------------------C------------A----CC--AAAT-GG-GG-T-GGG--TTTAACAT---AGAA--TCC--A---T--G--GGG--A---AAATAAT---TCC--AAAACCCAAC
gi|10 : aaacgaagtttggagactgagtgttttttgttcggttcctcttttttcttccTC--TCGTGCCTAAACACT-------------T-CTC-CTTAACCTG--ATAATGAAAGTCTTAGTTATTCAAGGATACGATAGATCAATTTATGTACAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAC----------AGGGGT-T-GTGGT-AC--ATT------------CCTGG-CG--------------------G------------A----TC--AAATGGG-GG-T-GGA---ATAACGT---AA----------------G--GGGGAA---AAACAAC---ACA--AAAATCCtgatgtaactttaattgataaatatgatatagatagtcacgaggtcttcgaaaaacgaaatgggtatatgatagtgggctacaacttagtgtcaagatcaagtttacatcttgacatctgatcatgaacataa
gi|11 : TTCTTTC--TTGCACCTAAAA-CCAT--G-CAGTCTTT-CTC-TGTAACTTG--TTGATAAAAATATTAGATATTCCAAGTTATGATAGGCCAATGTATTTAGAT--GTGCA-----G-AAAcc
gi|12 : cctctcaaatgaagtttgaagactgattgtctttgcttgtctttgctcagtttttattattcttcagattcttacagct-CTTCTTTC--TCGCGCGTAAA-----------------T-CTC-CGTAACCC--------------ATTAGATATTCAAGGGTATGATAGGCCAATGTAATTATTT--TTGCA-----G-AAATG--ATTTAG--TTTA-CAGATTGAA----------GGGGGT-T-AGGGG-AG--ATT------------TTCGG-GG--------------------A------------A----TC--AAAAGGG-G
gi|13 : ttattcttccgctttcttggtAGGGCAACATATGGAGAT--GTG-A-----GTAACTG--TTTTTG--TGTT-CAGATT-AA----------AGGAGT-T-AAAGT-ACATATT------------TTGGG-GGTGGGTGGTGGTGGTGGTGGTG------------T----TC--AAATGGGTTG-T-GG-----TAAAATCTAAG-A--CCTAAT---T--G--GGAAAA---AATTAAT---TCC--AACATT
gi|14 : CCG-CTTCTTTC--TTGCGCCTATGAAG-GTCCA-CAGCTGTT-CTC-CGTAA-CTG--TTGAT-AAAGTA
gi|15 : ctcccaaacgaagtttgcagacattgtttttgttccgcttttattgttcttgaaTTCCG-CCTCTTTC--TCGTGCCTAAAA--TGTCTG-CAAAATTT-TTCTCGTAAACTGA-TGGATGAAAggcctaccggtaattgaccaa
gi|16 : ttaagcatcgcaaaacgaaagtttggagacttatccacttccacTTTTG--TTTT----GTTGAA----------AGGGAG-T-AGGTT-AC--AAT------------TTGGC-GG---------------------------------A----TCCAAAATGGG-AG-G-GGG--TTTAAAAT---AG-A--
gi|17 : GGGT-AC--ATT------------TTGGG-GG--------------------GGGGGGGGGGGGGA----TC--AAATGAG-GGAT-GAG--TCTAACAT---AGTA--CTT--TA--T--G--GGGGGA---AATTAAT---TCC--AAAATTTAtagaactgaatgacaagaataatcaatcaaatc
gi|2 : agGTCGTT-CTC-CGTAACC-G--TTGATGAAAGGATTAATTATGCAAGGATTT---------ATGAATCTAATT--GCGCA-----G-AAATGGTTTTTTAATTTTTGCAGATTGAA----------GTGGGT-T-AGGGT-AC--A-T------------TTGGG---------------------------------------------AAATAGG-GA-TGGGG--CTTAACTC---AG-AAGTCTAGC---T--GTTGTGGAA---ATTTAGC---TCC--AAAATTCAA
gi|3 : ttcttgaaatttgttttccgttacTTCTG-TCTCTTTT--TCATGCCTAAAA-CTGTCAGACA-CTTTT-CTC-TGTAACCTG--TTGATGGAAGTCTTAGATATTCCAGGATATGATAGGCCATTATATCAAGAT--GTGCA-----G-AAATA--GCTTTG--TTTT-CAGATTGAA----------GGGGGTAG-AGGGTCCC--ATTGGGGGGGGGGGGGTGGG-GG--------------------G------------GGGGCTC--AAATTGG-GA-T-AGGGTTTTAACAT---AG-A--ACT--CTATT--G--GGGGAA---AATTCAT---TCC--AAAATagatacatgtatatcttgacaaatatgatagacaggttcttatagggtcttcaaaaaggagaagagaatgacagggccaaaattctagaatgaaggtcaagggacctccatgatatttatttctgaccatgaacat
gi|4 : gtctcgcaaataaattttggagatttgttgtttttgtttggttcttccacttcttcTTAGATATT-TAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG---TTTAG--TTTT-TAGATTGAA----------AGGGG-----GGG---------------------------------------------------------------------------GGG-GG-T-AAG--T----------------CCT--C---T--A--GGGGAA---AAATAATTAATTCTAAAAATTCAA
gi|5 : cttttgatttttccatatgatcattatacacggtctaaacatttttctcagtactgactttcTTCCG-CTTCTTCT--TCGATACTAAAAAC-GTCTG-CAGCCGTT-CTC-CGTAACCCT--TTGATGAAAGTATTAG--------------GATAAGCCAATGTATCTAGAT--GTGCAGAAATG-AAATG--TTTTTG--TTTT-CAGATTGAAAGGGGGGGGGGGGGGG-T-AGGGT-AC--ATT------------TT-GA-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTTTCATGA-AG-A--------------A--GGCGAATATAACTAA------C--AATATTCAAgctaataacttgtttaaatatgatagatctttagaaatgagaaggggatgaggggctactcaggtaactttgacctcttgacctgaaacatataaattag
gi|6 : gtctctcaaactaagtttgaagacttattgttcTT-CTC-AGTAACTTGACTT--------TCTTAGATATTCTAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG--TTTTAG--TTTT-TAGATTGAA----------GGGGG-----GG------------------------GGG-GG--------------------G------------A-----------------------------AAC-----AG-T--CCT--C---TAAG--GGGAAA---AATTAAT---TCT--AAAATTCAACAGtttca
gi|7 : taacatttTTCCG-CTTCTTTC--TTGCGCCCAAAAACTGTCCG-CAGCTTTT-CTC-TGTAACCTG--TCGATGAAAGTGTTAGATATTCTAGGACATGATCGGCCTTTGTATCTAGAT--GAGCA-----A-AAATA--TTTTTG--TTTT-CAGAATGAA----------AGGGGC-T-AAGGT-AC--ATT------------TTGGA-GA--------------------G------------A----TC--AAATGGG-GG-T-GGG--GTTAACAT---AG-A--CGT--C---T--G--AGGAAA---AAATAAT---TCC--AAATTTCACCAGatgtaacttgttaaatatgatagatctttagaaatgagaaggggatgatggggcctactcaggtaactttgacctctgaccatgaacat
gi|8 : -CTTCATTT--TCGCGCCTAAAAA-TGGCCG-CAGCCGTG-CTC-CTTAAGCCG--TTGAGGAAAGTATGGAATACTCAAGGATATGATGGACCAATGTATCTATAGCAGTGCA-----G-AAATG--TTTTTA--TTTT-GAGATTGAA----------GGGGG--C-AGGAT-AC--ATT------------TTTGA-GG--------------------A------------A----TC--AA
gi|9 : gtctctcaaacgaagttttgagtcatattgttttagctcagttTTCTA-CTTCTTTCACCCCCCCCTTAAAACTATCTG-AAGTCATT-CTC-TGTAACCTG--TTGA---AAGTATTAGATATTCAATTATACGATAGGCCAATATATCTAAAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGA
blockSeqs : . AC ACTGTCCGCAGCTT . T AC TG A G CA GAAAT T GT AT GC AGGGGGGGGG TAG C AT GGGGGGGGGGGG T . TGGGTGGTGGTGGTGGTGGTGT CA T A G GTTT G CTA AAGTCTAGCT TT TAT A TAA TA
blockSeqs : . . ACTATCTGAAGTCA . . A TA C T . . . . . C . TT . . . C . GGGGGGGGGGGGGA . . . . TT A GA AACTCTATT . . T . .
blockSeqs : . . AGGTCCACAGCTG . . . TG A T . . . . . C . TT . . . G . GGGGGC . . . . TC A . ACCTAATT . . T . .
blockSeqs : . . CTGTCAGACACTT . . . TG A G . . . . . C . TT . . . G . GA . . . . CT A . TACTTTAT . . T . .
blockSeqs : . . ACGTCTGCAGCCG . . . TG C C . . . . . C . GT . . . G . AA . . . . TT T . TCCTCTAA . . T . .
blockSeqs : . . ATGGCCGCAGCCG . . . TG T C . . . . . T . TT . . . G . GA . . . . GT A . ACGTCT . . A . .
blockSeqs : . . TGTCTGCAAAAT . . . TG T A . . . . . C . GT . . . G . GA . . . . A A . CCTCT . . C . .
blockSeqs : . . CCATGCAGTCT . . . GG T C . . . . . T . CT . . . G . GA . . . . T A . A . . T . .
blockSeqs : . ACT . . . T A A . . . . . C . C . . . G . AA . . . . . . . . . . A . .
blockSeqs : . . . . . . A C . . . . . G . . . . . T . A . . . . . . .
blockSeqs : . . . . . C . . . . . C . . . . . . . . . .
blockSeqs : . . . . C . . . . . . . . . . . .
blockSeqCons : ACTGTCCGCAGCCN* TG TT** ACCTCTAT********
originalCons : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AG-A--CCT--C---T--G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
finalCons : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCGCAGCCN-TT-CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGTT--AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AGACCTCTAT--------G--GGGGAA---AANTAAT---TCC--AAAATTCAACAG
Alignments
lowQualScore : 111111111111111 1111111111 1111 111111111111 44444444444444444444444444444444444444 1111 111 2222222222 111
lowQualScore : 4 55 0 666666666666666 6666 3 77 66 0 2 2 44 77777 3 44 44 33 4444444444 3333 3 44 0 555555555555 1 3 77777777777777777777777777777777777777 44 3 3 3 1111 1 111 8888888888 55 1 444 1 4
lowQualScore : . .. . ............... .... . .. .. . . . .. ..... . .. .. .. .......... .... . .. . ............ . . ...................................... .. . . . .... . ... .......... .. . ... . .
lowQualScore : 4 00 5 777777777777777 5555 1 33 88 2 2 1 22 77777 1 66 22 22 6666666666 4444 1 22 5 888888888888 5 1 22222222222222222222222222222222222222 22 3 6 6 9999 4 444 2222222222 55 4 000 0 0
consensus : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCGTT----CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AGACCTCTA--TG--GGGGAA---AATTAATTCC-AAAATTCAACAG
Reference ( family-3079 ) : TTCCG-CTTCTTTC--TCGCGCCTAAAAACTGTCCG-CAGCCNTT----CTC-CGTAACCTG--TTGATGAAAGTATTAGATATTCNAGGATATGATAGGCCAATGTATCTAGAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAA----------GGGGGT-T-AGGGT-AC--ATT------------TTGGG-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTAACAT---AGACCTCTA--TG--GGGGAA---AANTAATTCC-AAAATTCAACAG
gi|1 : TTCCGACTT--TTC--TCGT--------ACTGTCC---AACACTTGTCGCTC-CGTAACCTG--TTGA--AAGGTCTTCGATATTCTAG-ATATGATAGGC-AATGTATGTAGAT--ATGCA-----G-AGATA--TTTTTG--TTTT-GAGATTGAA----------GGGGGT-TCAGGGT-AC--ATT------------TTGGACGG--------------------C------------A----CC--AAAT-GG-GG-T-GGG--TTTAACAT---AGA-ATCCA--TG--GGG--A---AAATAATTCC-AAAACCCAAC
gi|10 : aaacgaagtttggagactgagtgttttttgttcggttcctcttttttcttccTC--TCGTGCCTAAACACT-------------T----CTC-CTTAACCTG--ATAATGAAAGTCTTAGTTATTCAAGGATACGATAGATCAATTTATGTACAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGAC----------AGGGGT-T-GTGGT-AC--ATT------------CCTGG-CG--------------------G------------A----TC--AAATGGG-GG-T-GGA---ATAACGT---AA----------G--GGGGAA---AAACAACACA-AAAATCCtgatgtaactttaattgataaatatgatatagatagtcacgaggtcttcgaaaaacgaaatgggtatatgatagtgggctacaacttagtgtcaagatcaagtttacatcttgacatctgatcatgaacataa
gi|11 : TTCTTTC--TTGCACCTAAAA-CCAT--G-CAGTCTTT----CTC-TGTAACTTG--TTGATAAAAATATTAGATATTCCAAGTTATGATAGGCCAATGTATTTAGAT--GTGCA-----G-AAAcc
gi|12 : cctctcaaatgaagtttgaagactgattgtctttgcttgtctttgctcagtttttattattcttcagattcttacagct-CTTCTTTC--TCGCGCGTAAA-----------------T----CTC-CGTAACCC--------------ATTAGATATTCAAGGGTATGATAGGCCAATGTAATTATTT--TTGCA-----G-AAATG--ATTTAG--TTTA-CAGATTGAA----------GGGGGT-T-AGGGG-AG--ATT------------TTCGG-GG--------------------A------------A----TC--AAAAGGG-G
gi|13 : ttattcttccgctttcttggtAGGGCAACATATGGAGAT--GTG-A-----GTAACTG--TTTTTG--TGTT-CAGATT-AA----------AGGAGT-T-AAAGT-ACATATT------------TTGGG-GGTGGGTGGTGGTGGTGGTGGTG------------T----TC--AAATGGGTTG-T-GG-----TAAAATCTAAGACCTAAT--TG--GGAAAA---AATTAATTCC-AACATT
gi|14 : CCG-CTTCTTTC--TTGCGCCTATGAA-GGTCCA-CAGCTGTT----CTC-CGTAA-CTG--TTGAT-AAAGTA
gi|15 : ctcccaaacgaagtttgcagacattgtttttgttccgcttttattgttcttgaaTTCCG-CCTCTTTC--TCGTGCCTAAAA--TGTCTG-CAAAATTT----TTCTCGTAAACTGA-TGGATGAAAggcctaccggtaattgaccaa
gi|16 : ttaagcatcgcaaaacgaaagtttggagacttatccacttccacTTTTG--TTTT----GTTGAA----------AGGGAG-T-AGGTT-AC--AAT------------TTGGC-GG---------------------------------A----TCCAAAATGGG-AG-G-GGG--TTTAAAAT---AGA
gi|17 : GGGT-AC--ATT------------TTGGG-GG--------------------GGGGGGGGGGGGGA----TC--AAATGAG-GGAT-GAG--TCTAACAT---AGTACTTTA--TG--GGGGGA---AATTAATTCC-AAAATTTAtagaactgaatgacaagaataatcaatcaaatc
gi|2 : agGTCGTT----CTC-CGTAACC-G--TTGATGAAAGGATTAATTATGCAAGGATTT---------ATGAATCTAATT--GCGCA-----G-AAATGGTTTTTTAATTTTTGCAGATTGAA----------GTGGGT-T-AGGGT-AC--A-T------------TTGGG---------------------------------------------AAATAGG-GA-TGGGG--CTTAACTC---AGAAGTCTAGCTGTTGTGGAA---ATTTAGCTCC-AAAATTCAA
gi|3 : ttcttgaaatttgttttccgttacTTCTG-TCTCTTTT--TCATGCCTAAAA-CTGTCAGACA-CTTTT----CTC-TGTAACCTG--TTGATGGAAGTCTTAGATATTCCAGGATATGATAGGCCATTATATCAAGAT--GTGCA-----G-AAATA--GCTTTG--TTTT-CAGATTGAA----------GGGGGTAG-AGGGTCCC--ATTGGGGGGGGGGGGGTGGG-GG--------------------G------------GGGGCTC--AAATTGG-GA-T-AGGGTTTTAACAT---AGAACTCTAT-TG--GGGGAA---AATTCATTCC-AAAATagatacatgtatatcttgacaaatatgatagacaggttcttatagggtcttcaaaaaggagaagagaatgacagggccaaaattctagaatgaaggtcaagggacctccatgatatttatttctgaccatgaacat
gi|4 : gtctcgcaaataaattttggagatttgttgtttttgtttggttcttccacttcttcTTAGATATT-TAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG---TTTAG--TTTT-TAGATTGAA----------AGGGG-----GGG---------------------------------------------------------------------------GGG-GG-T-AAG--T-------------CCTCTA---G--GGGAAAAATAATTAATTCTAAAAATTCAA
gi|5 : cttttgatttttccatatgatcattatacacggtctaaacatttttctcagtactgactttcTTCCG-CTTCTTCT--TCGATACTAAAAAC-GTCTG-CAGCCGTT----CTC-CGTAACCCT--TTGATGAAAGTATTAG--------------GATAAGCCAATGTATCTAGAT--GTGCAGAAATG-AAATG--TTTTTG--TTTT-CAGATTGAAAGGGGGGGGGGGGGGG-T-AGGGT-AC--ATT------------TT-GA-GG--------------------G------------A----TC--AAATGGG-GG-T-GGG--TTTTTCATGA-AGA---------A--GGCGAATATAACTAA---C-AATATTCAAgctaataacttgtttaaatatgatagatctttagaaatgagaaggggatgaggggctactcaggtaactttgacctcttgacctgaaacatataaattag
gi|6 : gtctctcaaactaagtttgaagacttattgttcTT----CTC-AGTAACTTGACTT--------TCTTAGATATTCTAGGATATGATAGGCCAATGTATATAGAT--GTGCA-----G-AAATG--TTTTAG--TTTT-TAGATTGAA----------GGGGG-----GG------------------------GGG-GG--------------------G------------A-----------------------------AAC-----AGTCCTCTA--AG--GGGAAA---AATTAATTCT-AAAATTCAACAGtttca
gi|7 : taacatttTTCCG-CTTCTTTC--TTGCGCCCAAAAACTGTCCG-CAGCTTTT----CTC-TGTAACCTG--TCGATGAAAGTGTTAGATATTCTAGGACATGATCGGCCTTTGTATCTAGAT--GAGCA-----A-AAATA--TTTTTG--TTTT-CAGAATGAA----------AGGGGC-T-AAGGT-AC--ATT------------TTGGA-GA--------------------G------------A----TC--AAATGGG-GG-T-GGG--GTTAACAT---AGACGTC----TG--AGGAAA---AAATAATTCC-AAATTTCACCAGatgtaacttgttaaatatgatagatctttagaaatgagaaggggatgatggggcctactcaggtaactttgacctctgaccatgaacat
gi|8 : -CTTCATTT--TCGCGCCTAAAAA-TGGCCG-CAGCCGTG----CTC-CTTAAGCCG--TTGAGGAAAGTATGGAATACTCAAGGATATGATGGACCAATGTATCTATAGCAGTGCA-----G-AAATG--TTTTTA--TTTT-GAGATTGAA----------GGGGG--C-AGGAT-AC--ATT------------TTTGA-GG--------------------A------------A----TC--AA
gi|9 : gtctctcaaacgaagttttgagtcatattgttttagctcagttTTCTA-CTTCTTTCACCCCCCCCTTAAAACTATCTG-AAGTCATT----CTC-TGTAACCTG--TTGA---AAGTATTAGATATTCAATTATACGATAGGCCAATATATCTAAAT--GTGCA-----G-AAATG--TTTTTG--TTTT-CAGATTGA