lowQualScore : 1111111111111111 11111 1111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111 11111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 1 44 222222 1 1 1 0000000000000000 1 1 22 55 1 1 00000 1 1 22 1 444444444 222 4 222 111111 22 888888888888888 222 11111 1 22 2 1 1 1 0000000000000000000000000000 55555 1 11 22 11 22 6666666666 2 11 11 3333 11 44444444444444 3333 22 2222 1 22 44444 222 2 2 1 5555555555555 33333 2222 11 1 33 44444 1 44444 1 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 44444444 777777777777777777 22 2 333 8888888888888888888888888 222222 4 3333 1 1 1 1 11 1 22 1111 222222 11 1 1 1111111 55555555555555555 1111 222222 1 3333333333333333333 1 1111 1 00000000000000000000000000000000 11 111 2222 1 1 1 2222 1 1 3333333333 33333333333333333333333333333333333 111 777777777777 1 222 333333 1 555555555 1 1 22 1 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 555555555555555555555555 1111 222222222222 1111 1 11 3333 1 222222222 1 1 222 444444444 222222222 22222 1 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 444444444444444 1 22222 111 1 1 111 22 33333 11 33 2222 222222 1 6666666
lowQualScore : 6 5 6 66 6 666666 5 7 5 6 3333333333333333 5 5 33 6 55 6 5 5 6 6 11111 5 5 11 6 6 5 6 333333333 6 777 0 333 777777 2 33 4 666666666666666 6 88 666 77777 3 6 77 4 2 3 5 3 3 9999999999999999999999999999 3 11111 3 88 0 55 7 99 77 6666666666 2 2 7 4 88 55 9999 6 99 00000000000000 5555 44 3 4444 3 5 77 3 44444 000 0 7777 444 2 0 7 4444444444444 33333 3 1 2222 44 3 11 88 11111 6 4 7 11111 5 2 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 88888888 3 555555555555555555 22 4 0 555 8888888888888888888888888 888888 0 1111 0 0 0 0 33 00 0 55 6666 111111 0 33 2 0 5 0 5555555 99999999999999999 0000 66 0 8 0 333333 8 0 0 5 8 4444444444444444444 0 8 6 0 0000 3 0 3 22222222222222222222222222222222 0 33 444 2 3 2222 0 0 0 1 3 0 3 1111 3 2 0000000000 66666666666666666666666666666666666 999 000000000000 1 3 333 888888 3 888888888 7 3 3 0 77 22 6 6 8 8 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 8 6 8 111111111111111111111111 6666 4 888888888888 6 2222 8 6 8 11 8 7777 6 6 6 7 6 3 777777777 3 3 222 555555555 5 222222222 1 66666 9 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 6 7 99 555555555555555 2 99 3 6 6 3 22222 4 6 000 0 77 99 6 3 666 22 6 33333 66 00 5 0000 999999 6 7 6 99 2 3 8 8 4444444 8 8
lowQualScore : . . . .. . ...... . . . . ................ . . .. . .. . . . . . ..... . . .. . . . . ......... . ... . ... ...... . .. . ............... . .. ... ..... . . .. . . . . . . ............................ . ..... . .. . .. . .. .. .......... . . . . .. .. .... . .. .............. .... .. . .... . . .. . ..... ... . .... ... . . . ............. ..... . . .... .. . .. .. ..... . . . ..... . . ........................................................................................... ........ . .................. .. . . ... ......................... ...... . .... . . . . .. .. . .. .... ...... . .. . . . . ....... ................. .... .. . . . ...... . . . . . ................... . . . . .... . . . ................................ . .. ... . . .... . . . . . . . .... . . .......... ................................... ... ............ . . ... ...... . ......... . . . . .. .. . . . . .................................................................................................................. . . . ........................ .... . ............ . .... . . . .. . .... . . . . . . ......... . . ... ......... . ......... . ..... . ........................................................................................................... . . .. ............... . .. . . . . ..... . . ... . .. .. . . ... .. . ..... .. .. . .... ...... . . . .. . . . . ....... . .
lowQualScore : 0 0 0 00 0 000000 0 0 0 0 0000000000000000 0 0 00 0 00 0 0 0 0 0 00000 0 0 00 0 0 0 0 000000000 0 000 0 000 555555 5 00 0 555555555555555 7 33 777 33333 3 7 00 0 5 0 5 3 3 7777777777777777777777777777 7 77777 3 33 7 33 3 55 55 5555555555 5 5 5 0 33 00 0000 7 00 00000000000000 5555 00 0 5555 0 0 55 0 00000 555 0 0000 555 5 0 0 3333333333333 33333 7 0 7777 77 3 77 00 77777 0 7 0 55555 0 5 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000000 0 000000000000000000 55 0 0 000 0000000000000000000000000 555555 0 5555 0 0 0 0 88 88 0 55 0000 000000 2 88 2 0 8 8 0000000 66666666666666666 0000 44 8 0 8 000000 0 0 8 0 0 8888888888888888888 6 0 0 8 6666 2 0 2 55555555555555555555555555555555 2 22 000 5 2 5555 8 0 0 2 2 2 3 3333 3 0 3333333333 00000000000000000000000000000000000 777 777777777777 0 3 333 333333 3 000000000 3 3 3 7 33 00 0 8 0 0 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 0 0 444444444444444444444444 2222 4 444444444444 4 0000 0 0 0 00 0 2222 7 7 7 3 7 3 222222222 3 3 000 555555555 0 777777777 0 66666 6 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 7 3 22 777777777777777 5 22 3 7 7 5 88888 0 0 222 6 22 22 7 3 555 55 7 55555 88 33 0 8888 888888 7 3 7 22 5 3 0 0 2222222 0 0
consensus : NNNNNNNNNNNNNNNGAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACTA--GAGAAAAAAGTCAACGTCTCATGGCA--AATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCNGNANNAGCNAGGGAAGTNNCNGCGTTCGAANGNCACGCGA-TGGACTGTTCCAACTACAA-AGCGAT-GCCTTTTGGAATG-AAAANCGCGCCGACCACCTCTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGACCTC-AG-GACGCGAAGCCCC---TAT-ATTGA--CGATGTN-ATAATANGCAGCCGGACACATCACGGGACGAACATNTNCCANATCATG--TGCA-GTTCTTC-GACACTCTGGCNAAAGCAAACTTGACAGTGGAACCTTGCGAAGAGTGACCCTCTGTCGNAGCTACNGTAGAATNTTTAGGTCAACCAANGTTATGGCCAGGGTTGTGTTACACCTACCTGTGGCTAGGGTGGGNGNNATNGNANAAGTTCCCGATTCCTACGAACAAA--AAAGAGT-AATGA-----GNTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAG-TTTTGTCCG-AN-TTTTTCNTCAACAGTTAGCCCACGTATTACCAACTTGCTGCANAAGAAAGGAACTGACTAAATCTNATNTGNACGGAAGAGCTGTTCAATGAATTCATTTGGCCAACCCAAATATATTTCTATCCTNACATTGNTGNNAGCCCAGTTCTCGCCNGCGTCCAGANTTCTCAAAGCAACTTTAAGCATTACTNCTNGACGCCAGTGACCGTAGGGTACATCGGTGGCAGGCTGCCGTTCTTGCATTCAACAACATAGTGGGCAATGTAGACAGAGCT-GTTTCTCTATTTTTC-AAA-G-AA-CTTANAAAATGT-CAG-CGAAATTAT-TCGACCAT-TG---AGAAA--GAGT-GTCTTGCATTG--TTGC-TAGCTT-AC-AGC-ATTTTGATGTTTAT-TTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAA-TCCNCT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTTACCTATT-CAAGAG--TA-GACAT-TGTTAT-TCAACATATTAAGGTCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTACTCTGGTT-GTT-GATCATGTG-ATGTATAT-----CA-A-GC-TTCTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTC-AAACTTT-CTTTTAAGATGGAGGC-TGTTGTGTACATCG-G-TGACCGCCGNACGTTTTGGAAAN--NCGGTGTGACCTTGTTTATAGCC-GCAGTA-TT-GA--TTTATTTT--TAGTN---ACGGGTGTGATGTAATACTTGTTTTTGTAAAAACTG-AAAAGATCTA-GAA-ATGCNGTGTTG-----T---CTNATGTCAACANGTT-ACATATTTTNATACTTTCT--AGCGTGT-TTCTAA-AA--TTG-AGAATAATATAT-ATAAG-A-CAGTGACTTG-ACG-AAT-AG--G--AGAC-ACTC-GT--GATTTT-CG-----NACTCT-------GAAAGATTTCTGNGATTTAATACT-G---------------------GGATATT----A-------------TT-A--CTG--GA------------------GA----GTTT-TG----TGTAAATTT--GGAT-TTATTAA--TTA-------NAC-----GGCCGGAN-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTATTAGAGAG--TTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAG-T-NA--AATTCTAGA-TA--GTCTTTGTTGTT----GAATT-CT-GCCT-TGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAA-TTTTATTAA-T-CGTAAC
Reference ( gi|1 ) : AAAAGATTTCAGTCAGAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGCCATGCCCATTAAACAGCATCCGTATCGCCTTAATCCGTTAAAATTACAGAACATTTACGATCAGAAGTGAAATACATGCTGGACATGACATTATTGATCAAGTAAAAGTGACTGGAGCTCACCATGTATTTCTCGTACCTAAACCTGATGGTACTTTAGACTGTGTACTGACTTTCGAAAAGTGAATTCGTCACAAAACGGACTCTTAATCCGATTTCCGAGAATTGAATGACTGTATTGATAAAATCCGGAAGTGCCAAATTTGTCAGCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTC-CGACTGGCCTATTCCAACTACAA-GGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGACCTTCAAGGATGCGAAGCC-----TAT-ATTGA--CGATGTG-ATAATATACAGT--GACAC----TGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAGT-A-GGTCAAGGTTGTGTTACACCTATT-ATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA--TTCTGTCCC-AA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGA-T-CATTTGGCAGAATTAAAT------CTATTCTCA---TGA-GGT-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGC----TTTGTTTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGACTAT-TG---AGAAA--GAAT-GTCTTGCATTG--TTGC-TAGCTTTAC-AGCCATTTTGATGTTTAT-TTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAA-TCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAATTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTACTCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTC-AAACTTT-CTTTTAGGGGGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTAGAAAA--T--ATATGACCTTGTTTATAACC-G---TA-TT-GA--TTTATTTT--TAA-A---ACGGGTG--ATGT----------TTTATA------G-AAAAG-TCTA-GAA-ATGC---GTTG-----T---ATTATGTCAACAAGTT-ACATAAATTGATACTTTCT--AGCGTGT-T-CTAG-AA--TTG-AGA-TA-TATAT-ATAAG-A-CAGTGACTTG-ATG-AAT-AG--G--AGAC-ACTC-GT--GATTTT-CA-----GACTTT-------GAAAGATTG-TGCGATTTGATACT-G---------------------GGA-ATT----A-------------T--A--CTG--GA------------------AG----GTTT-TG----TGTAAA-----GGAT-TTATTAA--TTA-------CAC-----GGCCGGAC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTATTAGAGAA--TTGTTATTCTTGTTTTATTT--TATTGTATAAT-T-GT--AAATAAA--TTAG-T-GA--AATTCTAGA-TAGTGTTTTTGTTGTT----GAATTACT-G-CT-TGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--A-TTTTATTAA-T-CGTAAC
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACTA--GAGAAAAAAGTCAACGTCTCATGGCA--AATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCC--AAACACGCAA--GGACTGTACCAATT-TAG-AGTGAT-GCCGTTTGGATTGGTAAAagcaca
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-C-CGA-TGAAC-GTTTCAGC-ACAA-AACAAT-GCCTTTT-GCATG-AAATTTGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T---------------------GATGTGAAGAC-----TAC-ATTGT--TAATGTC-ATAATAAGCAGC--GATACATCATG---CAAACATATGC-ATCTCATGCATGC--GTTC-CTGGACATTCTGtgcttcggcaagtttca
gi|2 : GGCCTATTCCAA-TACAAAGGT-ATAGCCTTTTGGAAT--AAAAACGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGACCTCAAGGGATGCGAAGCCCT---TAT-ATTGA--CACTGCACATA-T-TACAGTCGAACAC----CTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAGT-A-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTC-GTCCCCAACTTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGA-TTCATTTGGCCAACCCAAATATATTTCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATTCAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGACTAT-TG---AGAAA--GAAT-GTCTTGCAT-GCTTTGCGTAGCTTTAC-AGC-ATTT-GA-GTT-AT-TTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAA-TCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTTATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGTGAG--TGAGTTGTACTCTGGTTTGTTTGATTATGT--ATGAAGATA---------GCATTCTTGTATATTTTGATGTTT-A-TGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAACTTT-TTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGA-CGC-------TCTG----------------------TTATAGCCAG---TAGTTAGA--TTAATTTT--TAG-ACACACGGGTG--AT-T----------TTTATAC-----G-AAAAG-TCTAGGAA-GTGCA--GTTGCTGAAT---CTTATGTCAACAAGGT-TC------TAATACTTTCT--AGCGTGTGT-CTAGAAA--TTG-AGA-AC-TATAT-A-AAGCA-CAGT-AC-TG-ATG-AAT-GGTCA--AAAC-ACTC-GT---ATTTT-GG-----AACTCT-------
gi|16 : caacacAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTCAA-GACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAATatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|9 : gATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CAG---AACCTTGTGAAGAGTGAC-TTCTGTCAA-GCTATCGTA--ATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTACC-GTAGTTAGAGTGGGTAAAATAAGAAA-GTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAG-TTTTGTCCG-AC-TTTTTCCTCAAGAGT
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAA--ATTTGTTCA-AGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAA------------AATCTGA-ATGCACGAAAGA-TTG----ATGAAT-TATTT--------------------TATCCTAA---TGT-GTA-GCCCAGTTCTT-TCAGTT-CCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGC----CTTG--------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTACCAT-TG---AAAGA--GAGA-GTCTTGC-TTG--------------ACAAG--ATTTTGATGTTTAT-TTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAA-CCCCT--CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-tgatccatt
gi|10 : TTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAATCAT-T------AAA--TAGTGGTCTGGT-TTG--TTGT-TAGTTGAAC-AGCAA--------------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT--CAC-CT----T--TTA-AGAAGATG-TC--AC------TC-AAGACT-C-CGAG-GAT--GGA-TT------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTGC-AGAT-GCATTGTCAAGAGTatt
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT-----CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT------CTGTTT----GCTTCTCTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT---------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TTACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTTT-AGAT-GCCTTA--TTGAGGGT-GGTATAAAT-ATACT---GC--ATT---TCGTGTGGATTTTTCCCCAT-CAAA-------TTG-AT---TTGATGTATCT-TCAG--------------TTTC-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTC-AAACTAT-CTTATAAAATGGTGGCTTATTGTGCA
gi|3 : CATTG--TTGC-TAGCT-----AAGCATTTTGATGTTTAT-TTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAA-TCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT--TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTACTTTGGTTG-TT-GAT-ATGTG--TGTATAT-----TA-ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCAT-C-AAACTTTTCTTTTAAGGGGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTAGAAAA--T--ATA-GACCTTGTTTATAACC-AGT-TA-TT-GA--TTTATAGT---AG-C---ACGGGTG--ATGT----------TT-ATA------G-AAAAG-TCTA-AAATATTT---GTCG---------AT-ATGTCAACAAGTT-ACAATAATTCATACTATCT--AGCATGT-T-CTGA-AA--TAG-CGA-AA-TATAT-ATAA--A-CAGTGACTTG-ATG-AAT-AG--G--AAAC-ACTC-GT--G-TTTT--------AACTCTATACCGGGAATAATTA-T--TATTT----TT-G---------------------TG---CT----C-------------T--A--CTG--GA------------------GGAGAAGTTG-TG----TATATT-----TGAT-TTATT-A--TTA-------ACC-----GG-CGGAC-AAACATTGT-A-AG-T-AGA--TT---TCTTTTGTATAGGAG-A--TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAAT-AA--TTAGTT-CA--AATTCTAGA-TAGTG--TTTGTTGTT----GAATTACT-GCCT-TGTTC-T--TCAT-AAGGTAA-ATGTCGTGGACCTTA-----TTTATTAA-TACGT
gi|5 : --TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTGGAAAC--GCGGTGTGACCTT----ATAGCC-GCAGTA-TT-GA--T--GTTTT--TAGTG---ACAGGTGTGATGTAATACTTGTTTTTGTAAAAACTG-AAAGGATCTA-GAG--TGCTGTGTTG-----T---CTGATTT----ATGTA-ATATATTTTTATATTTT-T--AGTGTGT-TTCTAA-AA--TTG-AGAATAATATAT-ATAAG-A-CAGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTT-TG-----CACTCT-------GAAAGATTTCTGGGATTTAATACT-GGGATTATTTTTTGTGCTTACTGGATATTTACCA-------------TTCA--CTG--GA------------------GA----ATTT-TG----TGCAAATTTT-GGAT-TTATTAA--TTTT------CAC-----GACCGGAA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGATTAGAGAG--TTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAG-T-TAACAATTTTAAATTA--GTCTTTGTTGTT----GAATT-CT-GCCT-TG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAA-TTTTATTAA-T-
gi|4 : --TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTGGAAAC--GCGGTGTGACCTT----ATAGCC-GCAGTA-TT-GA--T--GTTTT--TAGTG---ACAGGTGTGATGTAATACTTGTTTTTGTAAAAACTG-AAAGGATCTA-GAG--TGCTGTGTTG-----T---CTGATTT----ATGTA-ATATATTTTTATATTTT-T--AGTGTGT-TTCTAA-AA--TTG-AGAATAATATAT-ATAAG-A-CAGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTT-TG-----CACTCT-------GAAAGATTTCTGGGATTTAATACT-GGGATTATTTTTTGTGCTTACTGGATATTTACCA-------------TTCA--CTG--GA------------------GA----ATTT-TG----TGCAAATTTT-GGAT-TTATTAA--TTTT------CAC-----GACCGGAA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGATTAGAGAG--TTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAG-T-TAACAATTTTAAATTA--GTCTTTGTTGTT----GAATT-CT-GCCT-TG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAA-TTTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGT-CTAGAGAAATT--ATATGACCTTGTTT-TAGAC-A---GA-TT-GATTTTTATTTTAGTAA-C---ACGGGTG---TGA----------TTACTA------GCAAAAG-TCTA-GAA-ATGCA--GTTG-----TCTGATTATGTCAAAAGGTTAACATACTTCAATA-TTTCTTAAGCGTGT-T-CTAG-AAATTTGCAGATTA-TATATAATAAG-ACCAGTGACTTGCATG-AAT--G--GTTAGAC-ACTC-GT--GATTT---------GAATGT-------GTAAGATTG-TGTGATTTAAAACTCG---------------------GGATATT----A-------------TTGATTCTGAAGG------------------AA----GTTT-CGCTGATGTAAATTTAGGAAT-TTATT-A--TTA-------AACGCCGGGGCCGGACTAAACG-TGT-A-AGTT--GTTTTT---TCTTTAGTATT-GAGAG--TGTTTATTC-TGTTTTATTT--TAT--TATAAT-TCGT--AAATAAA--TTAG-T-----CATTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAAT-G-CTCTGTTCTT--CAATAAAGGTAA-
gi|12 : ATAT-ATAAG-A-CAGTGACTTG-ATG-AAT-GG--G--TGGC-ACTC-GT--GATTTTCCACTCGTGATTTT-----------GATTT-TGTGATTT-ATACT-----------------------GGA-ATT----ATTTTTTTGTGCTGT--A--CTG--GATATTACCATTCACTGGAGAA----ATTT-TG----TGTAAATTT--GGAT-TTAATAA--TTA-------ACC-----GGCCTTAA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTATTAAAGAG--T
gi|2 : TACT-G---------------------AGAGATA----A-------------A--A--GTG--TA------------------TGC---GTTTATG----CATAAATTTGTGGATGTTATTAAATTTAACCGGGCCGC-----GGCC--AC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT---ATTG-ATAAT-T-GT--AAATAGAATTTAG-TTAA--AATTCTAAT-TAGTGTC---GTTATT----GAACT-CA-G-CT--GTTATT--T--TAAAGCTAA-ATTTC-T-GACC-TG--ATTTTTAGTAATT-CGTAAC
gi|15 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttatgtgacgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttctTTATTT--TATTGTGCAAT-TTGTTAAAATAAA--TTAG-T-GA--AATTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGG-CT-TGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAGT-T-TTTTATTAA-T-a
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 2 2 22 22 44444 1 2 1 333333333 11 111 1 11 1 1 1 66666666666666666666666666666 2222222 1 11 11 11 333 5555555555 11 33 22 1 222 11 222 33 3333 2222 1 222 2 22222 1111 1 1 1 222222 333 77777777 22 2222222 5555555555555555555555555555 4444444444 222 2 11111111 222 22 2 3333 66666666666666 11 22 1 11 111 111111 11 222 111111 111111111 4444444444444444444444444444444444 111 1 222 1 1111 11 1 777777777777777777777777777 111 11 44444444444 11 111 222222 1 333333333 1 1 22 1 2 33333 1111 111 11111 1111 999999999999999999999999 2 3333 111111 11 1 1111 11 11111111 1 1 111 111 222222222222222222222 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 44444444444444444444 1111 1 11111 11 11111 1111 1 11111 1 111 11 11 11 1111 1 1 333333
lowQualScore : 3 5 4 3 3 4 3 0 3 0 2 77 3 2 4 77 3 3 66666 3 3 3 3 5 0 2 5 2 4 0 1 1 22 1 0 0 22 1 0 999999999 77 3 3 333 44 0 9 2 11 2 6 88 0 0 2 0 99999999999999999999999999999 2 0 9999999 0 33 11 77 000 4444444444 1 77 1 33 33 22 2 1 2 7 000 0 6 55 0 000 1 7 6 1 6 00 1 8888 0 77 0000 0 11 22 1 1 4 7 666 0 55555 1 4444 5 0 0 7 000000 1 777 0 77 1 11111111 1 44 1 0 9999999 6666666666666666666666666666 0 1 9999999999 0 444 1 3 1 55555555 000 44 1 0 3 8888 11111111111111 99 6 44 0 3 999 8 8 8 8 1 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 5 3 99 3 999999999 7 6 3 6 6 8 0 5555555555555555555555555555555555 88 88 0 000 8 8 6 0 000 0 6 7777 22 0 444444444444444444444444444 4 55 777 22 77777777777 22 777 888888 0 999999999 3 0 0 3 88 6 3 0 3 1 8 11111 6 6 6 1111 000 6 6 6 66666 3333 99 555555555555555555555555 3 9 6 0000 99 444444 7777 1 00 3 6 1 5 99 7 6 99 1111 5 5 5 5 5 22 88888888 1 1 777 222 5 999999999999999999999 3 1 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 77777777777777777777 5 2222 1 22222 5 5 99 22 44444 0000 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 5 1 55 5 33 77 1 7777 7 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . . . . .. . . . .. . . ......... .. . . ... .. . . . .. . . .. . . . . ............................. . . ....... . .. .. .. ... .......... . .. . .. .. .. . . . . ... . . .. . ... . . . . . .. . .... . .. .... . .. .. . . . . ... . ..... . .... . . . . ...... . ... . .. . ........ . .. . . ....... ............................ . . .......... . ... . . . ........ ... .. . . . .... .............. .. . .. . . ... . . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . . . .. . ......... . . . . . . . .................................. .. .. . ... . . . . ... . . .... .. . ........................... . .. ... .. ........... .. ... ...... . ......... . . . . .. . . . . . . ..... . . . .... ... . . . ..... .... .. ........................ . . . .... .. ...... .... . .. . . . . .. . . .. .... . . . . . .. ........ . . ... ... . ..................... . . .......................................................................................... . .................... . .... . ..... . . .. .. ..... .... .. .. . . . ..... . . .. . . .. .. . . ... .. . . .. . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 0 0 0 5 55 0 5 0 55 0 0 00000 0 0 0 0 5 0 5 0 5 0 7 0 0 00 0 7 7 00 0 7 000000000 00 0 2 000 55 0 8 5 00 5 5 00 0 0 0 0 55555555555555555555555555555 0 2 2222222 0 88 00 77 777 0000000000 0 77 0 88 22 88 5 0 3 3 777 7 7 77 7 333 0 3 7 0 7 33 0 7777 7 33 7777 7 77 00 0 0 0 3 111 0 00000 0 8888 5 0 5 0 000000 0 333 7 33 0 33333333 0 77 0 7 0000000 0000000000000000000000000000 7 0 3333333333 7 777 0 3 0 00000000 333 33 0 7 3 0000 33333333333333 77 7 00 7 3 333 0 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 7 3 88 5 777777777 3 7 5 7 7 0 8 4444444444444444444444444444444444 88 88 8 444 0 0 0 0 222 0 5 2222 55 5 222222222222222222222222222 2 88 555 55 55555555555 55 555 888888 0 000000000 2 0 0 0 33 0 7 0 2 0 0 22222 7 7 7 8888 222 7 7 7 88888 7777 22 777777777777777777777777 7 8 7 3333 22 333333 2222 0 33 2 7 0 0 22 3 7 22 5555 7 7 7 0 7 99 99999999 4 4 444 999 7 111111111111111111111 0 4 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 11111111111111111111 7 1111 4 99999 7 0 33 33 33333 7777 99 77 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 7 0 77 7 11 99 7 9999 1 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-C-CGA-CGGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAATA-GCAGC--GACAC----CGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAGT-A-AGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGTTCGATGA-TTCATTTGGC-GA-CCAAAT--ATTTCTATTCTCA---TGATGT-AGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TTCAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTTA-CTATTGCAAGAG--TATG-ACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AGTG--AGT-GTACTCTGGTT-G-TT-GATTATGTG-ATGTAT----AT-CA-----ATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGAA------AGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAA-GGNGGAGGC-TGTTGTGTAC-TCGGTGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAGT--NAC--GGGTGTGATGT--TACT---TTTTATA--AACCGAAAAG-TCTAGAAA-TGC-GT-GTTG--TC---T-TATGTCAACANGTT-ACATAT-TTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTGAGAATAATATAT-ATAAG-A-CAGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T-----GAAA--GATT----T-TGNGATTTAATAC------T-G-----------------------GGA-----TAT-T--T------------TA----T----------T--------A---CTG-GAG----A-------------G-TTT-TG----TGTAAA-TTT--G--GAT-TTATTAA--TTAAAC-----GG--C-CGG--A-NAAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAG-TNA--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACTA--GAGAAAAAAGTCAACGTCTCATGGCA--AATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCNGNANNAGCNAGGGAAGTNNCNGCGTTCGAANGNCACGCGA-TGGACTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAN-CGCGCCGACCACCTCTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGACGCGAAG---CCCCTAT-ATTGA--CGATGTN-ATAATANGCAGCCGGACACATCACGGGACGAACATNTNCCANATCATG--TGCA-GTTCTTC-GACACTCTGGCNAAAGCAAACTTGACAGTGGAACCTTGCGAAGAGTGACCCTCTGTCGNAGCTACNGTAGAATNTTTAGGTCAACCAANGTTATGGCCAGGGTTGTGTTACACCTACCTGTGGCTAGGGTGGGNGNNATNGNANAAGTTCCCGATTCCTACGAACAAA--AAAGAGT-AATGA-----GNTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAGTTTTGTCC--GAN-TTTTTCNTCAACAGTTAGCCCACGTATTACCAACTTGCTGCANAAGAAAGGAACTGACTAAATCTNATNTGNACGGAAGAGCTGTTCAATGAATTCATTTGGCCAACCCAAATATATTTCTATCCTNACATTGNTGNNAGCCCAGTTCTCGCCNGCGTCCAGANTTCTCAAAGCAACTTTAAGCATTACTNCTNGACGCCAGTGACCGTAGGGTACATCGGTGGCAGGCTGCCGTTCTTGCATTCAACAACATAGTGGGCAATGTAGACAGAGCT-GTTTCTCTATTTTTC-AAA-G-AA-CTTANAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCNCT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTTACCTATT-CAAGAG--TA-G-ACAT-TGTTAT-TCAACATATTAAGGTCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AGTG--AGT-GTACTCTGGTT-G-TT-GATCATGTG-ATGTAT----AT-CA-----A-GC-TTCTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGAA------AGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAA-GATGGAGGC-TGTTGTGTACATCGGTGACCGCCGNACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAGT--NAC--GGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAAGATCTAGAAA-TGCNGT-GTTG--TC---T-NATGTCAACANGTT-ACATAT-TTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTGAGAATAATATAT-ATAAG-A-CAGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T-----GAAA--GATT----TCTGNGATTTAATAC------T-G-----------------------GGA-----TAT-----------------TA----T----------T--------A---CTG-GAG----A-------------G-TTT-TG----TGTAAA-TTT--G--GAT-TTATTAA--TTANAC-----GG--C-CGG--A-NAAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAG-TNA--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATT-CTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTC-CGACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAATATACAGT--GACAC----TGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAGT-A-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGA--TCATTTGGCAGAATTAAAT------CTATTCTCA---TGAGGT--GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGTTTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAATTATTGCAAGAG--TATG-ACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AGTG--AGT-GTACTCTGGTT-GGTT-GATTATGTGCATGTAT----ATACATGTATATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTTC-TTATCATTA---TTGAA------AGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAG-GGGGGAGG--TGTTGTGTAC-TTGGTGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACCG----TA-TT-GATTTAT-TTTTAA---AAC--GGGTG--ATGT----------TTTATA------GAAAAG-TCTAGAAA-TGC----GTTG--TA---T-TATGTCAACAAGTT-ACATAA-ATTGATACTTTCT--AGCGTGTT-CTA-GAA--TTGAGA-TA-TATAT-ATAAG-A-CAGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T-----GAAA--GATT----G-TGCGATTTGATAC------T-G-----------------------GGA------AT-----------------TA----T-------------------A---CTG-GAA----G-------------G-TTT-TG----TGTAAA------G--GAT-TTATTAA--TTACAC-----GG--C-CGG--A-CAAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTT--TATTGTATAAT-T-GT--AAATAAA--TTAG-TGA--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTG-CAGA-TGCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-C-CGA-TGAAC-GTTTCAGC-ACAAAACAAT-GCCTTTTGCA-TGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG-----ACTAC-ATTGT--TAATGTC-ATAATAAGCAGC--GATACATCATG---CAAACATATG-CATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATAT-ATAAG-A-CAGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT-----GATTTTGATT----T-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTGGA-----TAT-----------------TACCATT----------C--------A---CTG-GAG----A-------------AATTT-TG----TGTAAA-TTT--G--GAT-TTAATAA--TTAACC-----GG--C-CTT--A-AAAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACTA--GAGAAAAAAGTCAACGTCTCATGGCA--AATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--ACACGCAA--GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTT--TATTGTGCAAT-TTGTTAAAATAAA--TTAG-TGA--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAATgcga
gi|2 : A-CGGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCC-ACCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATTA--CAGTCGAACAC----CTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAGT---AGTCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC----TACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGA-TTCATTTGGCCAACCCAAATATATTTCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATTCAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTTATCTATTGCAAGAGACTA-G-ACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGTGAGTG--AGTTGTACTCTGGTTTG-TTTGATTATGT--ATGAAG----AT--------A-GCATTCTTGTATATTTTGATGTTT--ATGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGAA------AGTATTTC--------ATTGTTATTCAAAA-CTTTTTTTAAGGATTGAGGCATGTTGT-TACTTATGTGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AG-TAGTTAGATTAAT-TTTTAGA--CAC--ACGGGTGAT-----------TTTTATA-----CGAAAAG-TCTAGGAAGTGCAGTTGCTGAATC---T-TATGTCAACAAG-------GT-TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTGAGAAC--TATAT-A-AAGCA-CAGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAA--TACTATAATTTGGG--TTAATCCCTATCTT-C-----------------------GCC-----TATGTCCT------------TC----T----------T--------A---CTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTT--GTGGATGTTATTAAATTTAACC-----GGGCCGCGGCCA-CAAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT---ATTG-ATAAT-T-GT--AAATAGAATTTAG-TTA--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT--TTATT-CAAGAG--TA-GGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AGT---AGT-GTACTTTGGTT-G-TT-GAT-ATGTG--TGTAT----AT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGAA------AGT-TTTCA---------TGTCA-TCAAACTTTTCTTTTAA-GGGGGAGG--TGTTGTGTAC--TGGTGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAAC--CAGTTA-TT-GATTTA-----TAGTAGCAC--GG--GTGATG-----------TTTATA------GAAAAG-TCTA-AAA-TAT-----TTG--TC---GATATGTCAACAAGTT-ACA-ATAATTCATACTATCT--AGCATG-TTCTG-AAA--TAGCGA--AATATAT-ATAA--A-CAGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T------------------------------ATAC------C-G-----------------------GGAATAATTAT-----------------TA----TTTTTGTGCTCT--------A---CTG-GAGGAGAA-------------G---T-TG----TGTATA-TTT-----GAT-TTATT-A--TTAACC-----GG----CGG--A-CAAACATTGT-A-AG-T-AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAAT-AA--TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCGGTGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAGT--GAC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAG-AG-TGCTGT-GTTG--TC---T-GATTT----ATGTA-ATATAT-TTTTATA-TTTTT--AGTGTGTTTCTA-AAA--TTGAGAATAATATAT-ATAAG-A-CAGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T-----GAAA--GATT----TCTGGGATTTAATAC------T-G-----------------------GGAT----TATTTTTTGTGCTTACTGGATA----T----------TTACCATTCA---CTG-GAG----A-------------A-TTT-TG----TGCAAATTTT--G--GAT-TTATTAAT-TTTCAC-----GA--C-CGG--A-AAAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAG-TTAACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCGGTGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAGT--GAC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAG-AG-TGCTGT-GTTG--TC---T-GATTT----ATGTA-ATATAT-TTTTATA-TTTTT--AGTGTGTTTCTA-AAA--TTGAGAATAATATAT-ATAAG-A-CAGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T-----GAAA--GATT----TCTGGGATTTAATAC------T-G-----------------------GGAT----TATTTTTTGTGCTTACTGGATA----T----------TTACCATTCA---CTG-GAG----A-------------A-TTT-TG----TGCAAATTTT--G--GAT-TTATTAAT-TTTCAC-----GA--C-CGG--A-AAAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAG-TTAACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTACTTGGGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAGT--AACACGGGTGTGAT----TACT------------AGC--AAAAG-TCTAGAAA-TGCA---GTTG--TCTGAT-TATGTCAAAAGGTTAACATAC-TTCAATA-TTTCTTAAGCGTG-TTCTA-GAAATTTGCAGATTATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T-----GTAA--GA-T----TGTGTGATTTAAAAC------TCG-----------------------GGA-----TAT-----------------TA----T----------T--------GATTCTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTAGG--AAT-TTATT-A--TTAAACGCCGGGG--C-CGG--ACTAAACG-TGT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTC-TGTTTTATTT--TATTAT--AAT-TCGT--AAATAAA--TTAG-TC----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-----TTGATGAATT--------------------ATTT-TATCCTAA---TG-TGT-AGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG--------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAA-CCCCT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TTACCTA-------AG--TATG-ATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTT-TAGA-TGCCTTATT--GAGGGT-GGTATAAAT-ATACT---GC--A-TT---TCGTGTGGATTTTTCCCCAT-CA-----A-A-----TTG-AT---TTGATGTATC-TTCAG-----------TTTCTC----ATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAAC-TATCTTATAA-AATGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CAG---AACCTTGTGAAGAGTGACT-TCTGTC-AAGCTATCGTA--ATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTACC-GTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAACAA-------------TGG-----GATTTTGGGGTA-TGACT-GGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCA
Alignments
lowQualScore : 111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 22 11 22222 22222 1111 1 1 222222 111 555555555 1 1 3333 22 88888888888888888888888 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 1111 111111111 444444444444444444444444444444444 1 1 11 1 2222 2 1 222 4444444444 111 1 44444444444 1 111 222222 1 333333333 1 11 22 1 2 33333 1111 22 111 1111 000000000000000000000000 1 11 44444 111 11 11 11111111 1 1 111 111 2222222222222222 1 66666666666666666666666666666666666666666666666666666666666666666666666666666666 44444444444444444444 1111 1 11111 222 11111111 1 11111 1 111 11 22222 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 55 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 8888 22 22222222222222222222222 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 1111 3 999999999 7 6 3 6 6 8 0 666666666666666666666666666666666 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 2 0 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 0 3 1 8 11111 6 6 6 1111 00 6 6 6 111 6 3333 99 777777777777777777777777 3 44 11111 99 888 7777 1 3 7777 2 22 3 6 99 7 6 99 1 77 5 5 5 5 5 22 88888888 1 1 777 222 5 8888888888888888 1 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555 5 77777777777777777777 5 2222 1 22222 5 444 22 66666666 5 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 00000 5 33 77 1 7777 9 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . .. . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . .... .. ....................... ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . .... . ......... . . . . . . . ................................. .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... . . ........... . . . ... ...... . ......... . . .. .. . . . . . . . . ..... . . . .... .. . . . ... . .... .. ........................ . .. ..... .. ... .... . . .... . .. . . .. . . .. . .. . . . . . .. ........ . . ... ... . ................ . . ................................................................................ . .................... . .... . ..... . ... .. ........ . .. .. . . . ..... . . .. . . .. .. . . ... .. ..... . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 77 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 3333 77 77777777777777777777777 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 2222 5 777777777 3 7 5 7 7 0 8 666666666666666666666666666666666 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 5 0 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 0 2 4 0 22222 7 7 7 8888 22 7 7 7 000 7 7777 22 222222222222222222222222 3 00 77777 22 333 2222 0 7 8888 2 77 7 7 22 3 7 22 7 33 7 7 7 0 7 99 99999999 4 4 444 999 7 0000000000000000 4 0 44444444444444444444444444444444444444444444444444444444444444444444444444444444 7 11111111111111111111 7 1111 4 99999 7 333 66 77777777 7 99 77 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 44444 7 11 99 7 9999 0 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC---A--CCAAATAT--TTCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAGTA--AC--GGGTGTGATGT--TACTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTGAGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTA------------------ATAC------T-G----GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-AGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGTTCGATGATTCATTTGGCG--A--CCAAATAT--TTCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAGTN--AC--GGGTGTGATGT--TACTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TATTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTGAGAATAATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGNGATTTA------------------ATAC------T-G----GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AN-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTN-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGCAGAA--TTAAAT------CTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAA-TTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACC---GT-A-TT-GATTTAT-TTTTAA-A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTAGAAA-TGC-----GTTG--TAT---TATGTCAACAAGTTA-CA-TAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTGAG-AT-ATATATA-TAAG-AC-AGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTG------------------ATAC------T-G----GGA--A------T---------------T-A-----T--------ACTG-GAA----G-------------G-TTT-TG----TGTAAA----G--G--AT-TTATTAA--TTACACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTTTAT--TGTATAAT-T-GT--AAATAAA--TTAGTG-A--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTGC-AGAT-GCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTATACTGGAATTATTTTTTTGTGC------T-GTACTGGA-TAT---TAC---------------C-AT----TC-------ACTG-GAG----A-------------AATTT-TG----TGTAAA-TTTG--G--AT-TTAATAA--TTAACCG-----G--C-CTT--AA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTTTAT--TGTGCAAT-TTGTTAAAATAAA--TTAGTG-A--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA--GTCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCC--AACCCAAATATATTTCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTT-ATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT-A-TGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAACTT-TTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AGT-AGTTAGATTAAT-TTTTAGAC--AC--ACGGGTGAT--------T---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAG--------GTTCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTGAGAAC--TATATA--AAGCAC-AGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTA------------------ATCCCTATCTT-C----GCC-TATGTCC-T---------------T-CT----T--------ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTTGTGG--ATGTTATTAAATTTAACCG-----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT-AT--TG-ATAAT-T-GT--AAATAGAATTTAGTT-A--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT---TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GAT-ATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCAT-CAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAACC--AGTTA-TT-GATTTAT-----AGTAGCAC--GGGTG--ATGT--T---------TATA------GAAAAG-TCTA-AAA-TAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAATT-CATACTATCT--AGCATGTT-CTG-AAA--TAGCGAA--ATATATA-TAA--AC-AGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAA------------------TTAT------T--------A-T-T---T-T---------------T-GTGCTCT--------ACTG-GAGGAGAA-------------G-TT---G----TGTATA-TTTG-----AT-TTATTA---TTAACCG-----G--C--GG--AC-AAACATTGT-A-AGT--AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAATAA---TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAGTG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTGAGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTA------------------ATAC------T-G----GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAGTG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTGAGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTA------------------ATAC------T-G----GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAGTA--ACACGGGTGTGAT----TACT----------AG--C--AAAAG-TCTAGAAA-TGC-A---GTTG--TCTGATTATGTCAAAAGGTTAACA-TACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATTATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTA------------------AAAC------TCG----GGA-TAT---TAT---------------TGAT----T---------CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTA--GGAAT-TTATTA---TTAAACGCCGGGG--C-CGG--ACTAAACGT-GT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTCT-GTTTTATTTTAT--TAT--AAT-TCGT--AAATAAA--TTAGTC-----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------AT--TT-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAACCC-CT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TT-ACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTTT-AGAT-GCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATCT-TCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAACTAT-CTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 111 11 22222 22222 1111 1 1 222222 111 555555555 1 1 222 22 777777777777777 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 1111 111111111 444444444444444444444444444444444 1 1 11 1 2222 2 1 222 4444444444 111 11 44444444444 1 111 222222 1 333333333 1 11 22 1 2 33333 1111 11 11111 22222 999999999999999999999999 1 11 44444 111 111 11 11 11111111 1 1 111 111 2222222222222222 1 88888888888888888888888888888888888888888888888888888888888888888888888888888 44444444444444444444 1111 1 11 1111111111 1 11111 1 111 11 1111 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 555 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 555 00 888888888888888 6 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 1111 3 999999999 7 6 3 6 6 8 0 666666666666666666666666666666666 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 22 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 0 3 1 8 11111 6 6 6 1111 66 6 6 6 66666 00000 99 6 999999999999999999999999 3 44 11111 99 888 7777 1 222 66 1 3 6 99 7 6 99 6 55 5 5 5 5 5 22 88888888 1 1 777 222 5 8888888888888888 1 0 1 33333333333333333333333333333333333333333333333333333333333333333333333333333 5 77777777777777777777 5 2222 1 77 77 5 99 22 9999999999 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 9999 5 33 77 1 7777 9 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . ... . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . ... .. ............... . ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . .... . ......... . . . . . . . ................................. .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... .. ........... . . . ... ...... . ......... . . .. .. . . . . . . . . ..... . . . .... .. . . . ..... ..... .. . ........................ . .. ..... .. ... .... . ... .. . . . .. . . .. . .. . . . . . .. ........ . . ... ... . ................ . . . ............................................................................. . .................... . .... . .. .. . .. .. .......... .. .. . . . ..... . . .. . . .. .. . . ... .. .... . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 333 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 777 77 777777777777777 7 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 2222 5 777777777 3 7 5 7 7 0 8 666666666666666666666666666666666 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 55 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 0 2 4 0 22222 7 7 7 8888 00 7 7 7 88888 22222 22 7 222222222222222222222222 3 00 77777 22 333 2222 0 888 88 0 7 7 22 3 7 22 7 00 7 7 7 0 7 99 99999999 4 4 444 999 7 0000000000000000 4 7 7 66666666666666666666666666666666666666666666666666666666666666666666666666666 7 11111111111111111111 7 1111 4 99 99 7 33 66 6666666666 99 44 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 4444 7 11 99 7 9999 0 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC--A----AA--TATTTCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATG---TACTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-C-ATANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC--ACC--AA-ATATTTCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGT--TACTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-C-ATANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC--AG---AA-TTAAATCTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAA-TTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACC---G-TA-TT-GATTTAT-TTTTAA--A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTAGAAA-TGC-----GTTG--TAT---TATGTCAACAAGTTA-C-ATAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTG-AG-AT-ATATATA-TAAG-AC-AGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTGATAC------T-G-----------------------GGA--A------T---------------T-A-----T--------ACTG-GAA----G-------------G-TTT-TG----TGTAAA----G--G--AT-TTATTAA--TTACACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTT--TATTGTATAAT-T-GT--AAATAAA--TTAGTG-A--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTG-CAGA-TGCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTGGA-TAT---TAC---------------C-AT----TC-------ACTG-GAG----A-------------AATTT-TG----TGTAAA-TTTG--G--AT-TTAATAA--TTAACCG-----G--C-CTT--AA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTT--TATTGTGCAAT-TTGTTAAAATAAA--TTAGTG-A--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCCAACCCAAATATATTTCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTT-ATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT--ATGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAA-CTTTTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AG-TAGTTAGATTAAT-TTTTAGACAC-AC--GGGTG---------A-TT---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAGGT--------TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTG-AGAAC--TATATA--AAGCAC-AGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTAATCCCTATCTT-C-----------------------GCC-TATGTCC-T---------------T-CT----T--------ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTTGTGG--ATGTTATTAAATTTAACCG-----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT---ATTG-ATAAT-T-GT--AAATAGAATTTAGTT-A--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT---TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GA-TATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCA-TCAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAAC--CAGTTA-TT-GATTTA-----TAG-TAGCAC--GG--GTGATG-----------TTTATA------GAAAAG-TCTA-AAA-TAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAA-TTCATACTATCT--AGCATG-TTCTG-AAA--TAG-CGAA--ATATATA-TAA--AC-AGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAATTAT------T---------------------------A-T-T---T-T---------------T-GTGCTCT--------ACTG-GAGGAGAA-------------G---T-TG----TGTATA-TTT---G--AT-TTATT-A--TTAACCG-----G----CGG--AC-AAACATTGT-A-AG-T-AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAAT-AA--TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-T-ATATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-T-ATATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAG-TA--ACACGGGTGTGAT----TACT----------AG--C--AAAAG-TCTAGAAA-TGC-A---GTTG--TCTGATTATGTCAAAAGGTTAAC-ATACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATT-ATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTAAAAC------TCG-----------------------GGA-TAT---TAT---------------TGAT----T---------CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTA--GGAAT-TTATTA---TTAAACGCCGGGG--C-CGG--ACTAAACGT-GT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTCT-GTTTTATTT--TATTAT--AAT-TCGT--AAATAAA--TTAGTC-----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------ATTT-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAACCC-CT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TT-ACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTT-TAGA-TGCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATC-TTCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAAC-TATCTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 111 11 22222 22222 1111 1 1 222222 111 555555555 1 1 222 22 7777777777777777 222 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 1111 111111111 444444444444444444444444444444444 1 1 11 1 2222 2 1 222 4444444444 111 11 44444444444 1 111 222222 1 333333333 1 11 22 1 2 33333 1111 11 11111 22222 999999999999999999999999 1 11 44444 111 111 11 11 11111111 1 1 111 111 2222222222222222 1 88888888888888888888888888888888888888888888888888888888888888888888888888888 44444444444444444444 1111 1 11 1111111111 1 11111 1 111 11 1111 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 555 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 555 00 6666666666666666 333 6 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 1111 3 999999999 7 6 3 6 6 8 0 666666666666666666666666666666666 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 22 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 0 3 1 8 11111 6 6 6 1111 66 6 6 6 66666 00000 99 6 777777777777777777777777 3 44 11111 99 888 7777 1 222 66 1 3 6 99 7 6 99 6 55 5 5 5 5 5 22 88888888 1 1 777 222 5 8888888888888888 1 0 1 33333333333333333333333333333333333333333333333333333333333333333333333333333 5 77777777777777777777 5 2222 1 77 77 5 99 22 9999999999 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 9999 5 33 77 1 7777 9 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . ... . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . ... .. ................ ... . ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . .... . ......... . . . . . . . ................................. .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... .. ........... . . . ... ...... . ......... . . .. .. . . . . . . . . ..... . . . .... .. . . . ..... ..... .. . ........................ . .. ..... .. ... .... . ... .. . . . .. . . .. . .. . . . . . .. ........ . . ... ... . ................ . . . ............................................................................. . .................... . .... . .. .. . .. .. .......... .. .. . . . ..... . . .. . . .. .. . . ... .. .... . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 333 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 777 77 3333333333333333 333 7 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 2222 5 777777777 3 7 5 7 7 0 8 666666666666666666666666666666666 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 55 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 0 2 4 0 22222 7 7 7 8888 00 7 7 7 88888 22222 22 7 222222222222222222222222 3 00 77777 22 333 2222 0 888 88 0 7 7 22 3 7 22 7 00 7 7 7 0 7 99 99999999 4 4 444 999 7 0000000000000000 4 7 7 66666666666666666666666666666666666666666666666666666666666666666666666666666 7 11111111111111111111 7 1111 4 99 99 7 33 66 6666666666 99 44 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 4444 7 11 99 7 9999 0 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC-------AG-A-ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-C-ATANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC-------AA-ATATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAG-TA-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-C-ATANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTT--TATTGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC-------AG-A-ATTAAATCTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAA-TTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTC-ATGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAAC-TTTCTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACC---G-TA-TT-GATTTAT-TTTTAA--A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTAGAAA-TGC-----GTTG--TAT---TATGTCAACAAGTTA-C-ATAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTG-AG-AT-ATATATA-TAAG-AC-AGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTGATAC------T-G-----------------------GGA--A------T---------------T-A-----T--------ACTG-GAA----G-------------G-TTT-TG----TGTAAA----G--G--AT-TTATTAA--TTACACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTT--TATTGTATAAT-T-GT--AAATAAA--TTAGTG-A--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTG-CAGA-TGCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTGGA-TAT---TAC---------------C-AT----TC-------ACTG-GAG----A-------------AATTT-TG----TGTAAA-TTTG--G--AT-TTAATAA--TTAACCG-----G--C-CTT--AA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTT--TATTGTGCAAT-TTGTTAAAATAAA--TTAGTG-A--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCCAACCCAAATATATT---TCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTT-ATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTG-CAGA-TGCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT--ATGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAA-CTTTTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AG-TAGTTAGATTAAT-TTTTAGACAC-AC--GGGTG------A----TT---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAGGT--------TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTG-AGAAC--TATATA--AAGCAC-AGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTAATCCCTATCTT-C-----------------------GCC-TATGTCC-T---------------T-CT----T--------ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTTGTGG--ATGTTATTAAATTTAACCG-----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT---ATTG-ATAAT-T-GT--AAATAGAATTTAGTT-A--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT---TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GA-TATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCA-TCAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAAC--CAGTTA-TT-GATTTA-----TAG-TAGCAC--GG--GTGATG-----------TTTATA------GAAAAG-TCTA-AAA-TAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAA-TTCATACTATCT--AGCATG-TTCTG-AAA--TAG-CGAA--ATATATA-TAA--AC-AGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAATTAT------T---------------------------A-T-T---T-T---------------T-GTGCTCT--------ACTG-GAGGAGAA-------------G---T-TG----TGTATA-TTT---G--AT-TTATT-A--TTAACCG-----G----CGG--AC-AAACATTGT-A-AG-T-AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAAT-AA--TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-T-ATATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAG-TA-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-T-ATATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTT--TATTGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAG-TA--ACACGGGTGTGAT-TA---CT----------AG--C--AAAAG-TCTAGAAA-TGC-A---GTTG--TCTGATTATGTCAAAAGGTTAAC-ATACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATT-ATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTAAAAC------TCG-----------------------GGA-TAT---TAT---------------TGAT----T---------CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTA--GGAAT-TTATTA---TTAAACGCCGGGG--C-CGG--ACTAAACGT-GT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTCT-GTTTTATTT--TATTAT--AAT-TCGT--AAATAAA--TTAGTC-----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------ATT---T-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAACCC-CT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TT-ACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTT-TAGA-TGCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATC-TTCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAAC-TATCTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 111 11 22222 22222 1111 1 1 222222 111 555555555 1 1 222 22 6666666666666666 222 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 1111 111111111 444444444444444444444444444444444 1 1 11 1 2222 2 1 222 4444444444 111 1 44444444444 1 111 222222 1 333333333 1 11 22 1 2 33333 1111 22 111 22222 999999999999999999999999 1 11 44444 111 11 11 11111111 1 1 111 111 2222222222222222 1 88888888888888888888888888888888888888888888888888888888888888888888888888888 44444444444444444444 1111 1 11111 222 11111111 1 11111 1 111 11 1111 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 555 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 555 00 5555555555555555 333 6 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 1111 3 999999999 7 6 3 6 6 8 0 666666666666666666666666666666666 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 2 0 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 0 3 1 8 11111 6 6 6 1111 00 6 6 6 111 6 00000 99 7 777777777777777777777777 3 44 11111 99 888 7777 1 7777 3 22 3 6 99 7 6 99 6 55 5 5 5 5 5 22 88888888 1 1 777 222 5 8888888888888888 1 0 1 33333333333333333333333333333333333333333333333333333333333333333333333333333 5 77777777777777777777 5 2222 1 22222 5 444 22 66666666 5 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 9999 5 33 77 1 7777 9 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . ... . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . ... .. ................ ... . ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . .... . ......... . . . . . . . ................................. .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... . . ........... . . . ... ...... . ......... . . .. .. . . . . . . . . ..... . . . .... .. . . . ... . ..... .. . ........................ . .. ..... .. ... .... . .... . .. . . .. . . .. . .. . . . . . .. ........ . . ... ... . ................ . . . ............................................................................. . .................... . .... . ..... . ... .. ........ . .. .. . . . ..... . . .. . . .. .. . . ... .. .... . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 333 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 777 77 7777777777777777 333 7 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 2222 5 777777777 3 7 5 7 7 0 8 666666666666666666666666666666666 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 5 0 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 0 2 4 0 22222 7 7 7 8888 22 7 7 7 000 7 22222 22 3 222222222222222222222222 3 00 77777 22 333 2222 0 8888 3 77 7 7 22 3 7 22 7 00 7 7 7 0 7 99 99999999 4 4 444 999 7 0000000000000000 4 7 7 66666666666666666666666666666666666666666666666666666666666666666666666666666 7 11111111111111111111 7 1111 4 99999 7 333 66 77777777 7 99 44 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 4444 7 11 99 7 9999 0 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATTAAATCTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAA-TTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACC---GT-A-TT-GATTTAT-TTTTAA--A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTAGAAA-TGC-----GTTG--TAT---TATGTCAACAAGTTA-CA-TAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTG-AG-AT-ATATATA-TAAG-AC-AGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTGATAC------T-G-----------------------GGA--A------T---------------T-A-----T--------ACTG-GAA----G-------------G-TTT-TG----TGTAAA----G--G--AT-TTATTAA--TTACACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTTTAT--TGTATAAT-T-GT--AAATAAA--TTAGTG-A--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTGC-AGAT-GCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTGGA-TAT---TAC---------------C-AT----TC-------ACTG-GAG----A-------------AATTT-TG----TGTAAA-TTTG--G--AT-TTAATAA--TTAACCG-----G--C-CTT--AA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTTTAT--TGTGCAAT-TTGTTAAAATAAA--TTAGTG-A--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCCAACCCAAATATATT---TCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTT-ATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT-A-TGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAACTT-TTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AGT-AGTTAGATTAAT-TTTTAGACAC-AC--GGGTG------A----TT---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAGGT--------TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTG-AGAAC--TATATA--AAGCAC-AGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTAATCCCTATCTT-C-----------------------GCC-TATGTCC-T---------------T-CT----T--------ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTTGTGG--ATGTTATTAAATTTAACCG-----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT-AT--TG-ATAAT-T-GT--AAATAGAATTTAGTT-A--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT---TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GAT-ATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCAT-CAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAACC--AGTTA-TT-GATTTAT-----AG-TAGCAC--GGGTG--ATGT-----------TTATA------GAAAAG-TCTA-AAA-TAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAATT-CATACTATCT--AGCATGTT-CTG-AAA--TAG-CGAA--ATATATA-TAA--AC-AGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAATTAT------T---------------------------A-T-T---T-T---------------T-GTGCTCT--------ACTG-GAGGAGAA-------------G-TT---G----TGTATA-TTTG-----AT-TTATTA---TTAACCG-----G--C--GG--AC-AAACATTGT-A-AGT--AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAATAA---TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAG-TA--ACACGGGTGTGAT-TA---CT----------AG--C--AAAAG-TCTAGAAA-TGC-A---GTTG--TCTGATTATGTCAAAAGGTTAACA-TACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATT-ATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTAAAAC------TCG-----------------------GGA-TAT---TAT---------------TGAT----T---------CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTA--GGAAT-TTATTA---TTAAACGCCGGGG--C-CGG--ACTAAACGT-GT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTCT-GTTTTATTTTAT--TAT--AAT-TCGT--AAATAAA--TTAGTC-----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------ATT---T-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAACCC-CT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TT-ACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTTT-AGAT-GCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATCT-TCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAACTAT-CTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 111 11 22222 22222 1111 1 1 222222 111 555555555 1 1 222 22 6666666666666666 222 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 1111 111111111 444444444444444444444444444444444 1 1 11 1 2222 2 1 222 4444444444 111 1 44444444444 1 111 222222 1 333333333 1 11 22 1 2 33333 1111 22 111 22222 999999999999999999999999 1 11 44444 111 11 11 11111111 1 1 111 111 2222222222222222 1 88888888888888888888888888888888888888888888888888888888888888888888888888888 44444444444444444444 1111 1 11111 222 11111111 1 11111 1 111 11 1111 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 555 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 555 00 5555555555555555 333 6 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 1111 3 999999999 7 6 3 6 6 8 0 666666666666666666666666666666666 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 2 0 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 0 3 1 8 11111 6 6 6 1111 00 6 6 6 111 6 00000 99 7 777777777777777777777777 3 44 11111 99 888 7777 1 7777 3 22 3 6 99 7 6 99 6 55 5 5 5 5 5 22 88888888 1 1 777 222 5 8888888888888888 1 0 1 33333333333333333333333333333333333333333333333333333333333333333333333333333 5 77777777777777777777 5 2222 1 22222 5 444 22 66666666 5 77 66 1 5 5 99999 6 5 55 7 3 77 44 5 1 222 99 9999 5 33 77 1 7777 9 0 5 4 77 0 1 6 6 888888 6 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . ... . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . ... .. ................ ... . ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . .... . ......... . . . . . . . ................................. .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... . . ........... . . . ... ...... . ......... . . .. .. . . . . . . . . ..... . . . .... .. . . . ... . ..... .. . ........................ . .. ..... .. ... .... . .... . .. . . .. . . .. . .. . . . . . .. ........ . . ... ... . ................ . . . ............................................................................. . .................... . .... . ..... . ... .. ........ . .. .. . . . ..... . . .. . . .. .. . . ... .. .... . .. .. . .... . . . . .. . . . . ...... . . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 333 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 777 77 7777777777777777 333 7 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 2222 5 777777777 3 7 5 7 7 0 8 666666666666666666666666666666666 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 5 0 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 0 2 4 0 22222 7 7 7 8888 22 7 7 7 000 7 22222 22 3 222222222222222222222222 3 00 77777 22 333 2222 0 8888 3 77 7 7 22 3 7 22 7 00 7 7 7 0 7 99 99999999 4 4 444 999 7 0000000000000000 4 7 7 66666666666666666666666666666666666666666666666666666666666666666666666666666 7 11111111111111111111 7 1111 4 99999 7 333 66 77777777 7 99 44 4 7 7 11111 6 7 99 3 7 99 44 7 4 999 33 4444 7 11 99 7 9999 0 7 0 9 99 7 4 7 7 222222 7 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATTAAATCTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCAC--CACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-T--GGAGTTTAA-TTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTA-GAAAAT--ATAT-GAC-CT-TGTTTATAACC---GT-A-TT-GATTTAT-TTTTAA--A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTAGAAA-TGC-----GTTG--TAT---TATGTCAACAAGTTA-CA-TAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTG-AG-AT-ATATATA-TAAG-AC-AGTGACTTG-AT-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTGATAC------T-G-----------------------GGA--A------T---------------T-A-----T--------ACTG-GAA----G-------------G-TTT-TG----TGTAAA----G--G--AT-TTATTAA--TTACACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTTTAT--TGTATAAT-T-GT--AAATAAA--TTAGTG-A--AA-TTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--AT-TTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCCCT-CAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GAT--GGA-TT-------------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTGC-AGAT-GCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-AT-GAAT-GG--G--TGGC-ACT-CGT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTGGA-TAT---TAC---------------C-AT----TC-------ACTG-GAG----A-------------AATTT-TG----TGTAAA-TTTG--G--AT-TTAATAA--TTAACCG-----G--C-CTT--AA-AAACATTGT-A-AGTT-AGAATTG---T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTTTAT--TGTGCAAT-TTGTTAAAATAAA--TTAGTG-A--AA-TTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACCTAG-TTT-TTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCCAACCCAAATATATT---TCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAATCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCG-TCGGAAGTTT-ATCTATTGCAAGAGACTA-GACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT-A-TGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAACTT-TTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC
gi|2 : caacTGT-GACGCTCTGTT-ATAGCC--AGT-AGTTAGATTAAT-TTTTAGACAC-AC--GGGTG------A----TT---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAGGT--------TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTG-AGAAC--TATATA--AAGCAC-AGT-ACT-G-AT-GAAT-GGTCA--AAAC-ACT-CGT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTAATCCCTATCTT-C-----------------------GCC-TATGTCC-T---------------T-CT----T--------ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAA-TTTGTGG--ATGTTATTAAATTTAACCG-----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCTTTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTATTT-AT--TG-ATAAT-T-GT--AAATAGAATTTAGTT-A--AAATTCTAAT-TA--GTGTC-GTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACCT--GATT-TTTAGTAATT-CGTAACgctctgttatagccagtagttagattaatttttagacacacgggtgatttttatacgaaaagtctaggaagtgcagttgctgaatcttatgtcaacaaggttctaatactttctagcgtgtgtctagaaattgagaactatataaagcacagtactgatgaatggtcaaaacactcgtattttggaactctatacgggaatactataatttgggttaatccctatcttcgcctatgtccttcttactgagagataaaagtgtatgcgtttatgcataaatttgtggatgttattaaatttaaccgggccgcggccacaaacattgtagagtttagattttatgcttttagtagttgagaaagttgttattttgttttatttattgataattgtaaatagaatttagttaaaattctaattagtgtcgttattgaactcagctgttattttaaagctaaatttctgacctgatttttagtaattcgtaaca
gi|3 : caacacggcctattccaatacaaaggtatagccttttggaataaaaacgcgccaccacctttcaaagcgatgatccactcccttctagcatgacctcaagggatgcgaagcccttatattgacactgcacatattacagtcgaacacctggaggaacatctcccaaatcatgtgcaagttcttgaactctggcaaaagcaaacttgacagtggaaccttgcgaaaagtccctttgtcgtagctacagagaatatttagtcaaccaaagtagtcagtgtgttacacctatttatggctaaggtggaggctattgcacaagttcccgattcctacgaacaaagaaaagagtaatgagtttttaggaatgactgagttttacagaaaaattcgtccccaactttttcttccacagctagcccactactaacttgctaacaaaaaaggaactgactaaatctcatctggacggaaaagctgttcaatgattcatttggccaacccaaatatatttctattctcacattgatgatagtccagttctcgcctgcgtccagatttctcaaagcaactttaagcattacttctagacgccagtgaccgtaaggtacatcggtggcaggctgtcgtttttgcattcaacaacatataagcaatgtagacagagttgtttctctatttttccaaagaacttacaaaatgttcaggcggaaatatctcgactattgagaaagaatgtcttgcatgctttgcgtagctttacagcatttgagttatttcattactattgcatccaattctctgtctttacggatcacaatccacttcacattaatataataacataaatgctcaaacaaaaaccaaagacttcacaagcgtcggaagtttatctattgcaagagactagacattgttattcgacatattaaggtaaaggacaatgttattgcagatgctttgtctcgagtgtgagtgagttgtactctggtttgtttgattatgtatgaagatagcattcttgtatattttgatgtttatgaaaaaaaaaaaaatttttccttatcattattgaaagtatttcattgttattcaaaactttttttaaggattgaggcatgttgttacttaCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAATCCACT-CACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---T--GGAGTTT---TTATT-CAAGAG--TAGGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GAT-ATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCAT-CAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTTA-GAAAA----TATAGAC-CT-TGTTTATAACC--AGTTA-TT-GATTTAT-----AG-TAGCAC--GGGTG--ATGT-----------TTATA------GAAAAG-TCTA-AAA-TAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAATT-CATACTATCT--AGCATGTT-CTG-AAA--TAG-CGAA--ATATATA-TAA--AC-AGTGACTTG-AT-GAAT-AG--G--AAAC-ACT-CGT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAATTAT------T---------------------------A-T-T---T-T---------------T-GTGCTCT--------ACTG-GAGGAGAA-------------G-TT---G----TGTATA-TTTG-----AT-TTATTA---TTAACCG-----G--C--GG--AC-AAACATTGT-A-AGT--AGATTTC---TTTT--GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAATAA---TTAGTTCA--AA-TTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACCT-----TATTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTTG-GAAACGCGGTGT-GAC-CT-T----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAG-TG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTAGAG--TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAG--T--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTAT---T-TTTTGTGCTTACTGGAT-AT----TTACCATTCACTG-GAG----A-------------A-TTT-TG----TGCAAATTTTG--G--AT-TTATTAAT-TTTCACG-----A--C-CGG--AA-AAACATTGTAA-AGTT-ATATTTT---T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTT-AACAA-TTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAAT-TTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTAGAGAAATT--ATAT-GAC-CT-TGTTT-TAG--ACAG--A-TT-GATTTTTATTTTAG-TA--ACACGGGTGTGAT-TA---CT----------AG--C--AAAAG-TCTAGAAA-TGC-A---GTTG--TCTGATTATGTCAAAAGGTTAACA-TACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATT-ATATATAATAAG-ACCAGTGACTTGCAT-GAAT--G--GTTAGAC-ACT-CGT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTAAAAC------TCG-----------------------GGA-TAT---TAT---------------TGAT----T---------CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAA-TTTA--GGAAT-TTATTA---TTAAACGCCGGGG--C-CGG--ACTAAACGT-GT-A-AGTT--GTTTTT---TCTTTAGTA-TT--GAGAGTGTTTATTCT-GTTTTATTTTAT--TAT--AAT-TCGT--AAATAAA--TTAGTC-----A-TTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------ATT---T-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAACCC-CT-CACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT--------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-T--G----TT-ACCTA-------AG--TATGATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTTT-AGAT-GCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATCT-TCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAACTAT-CTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T
blockSeqs : T T A A T A A . A . C . A G T . T A T A T A T A . G G C T CC AATGTC CAA A T CA CA A G G . C A T C A G G GTCATGCCGCCTTATAACTTTCAA CCTCCCT G AT AC AAG T ATA A A C CA AA G C A A G G G CC GTA A G AC T TAG G TT C A AAAGA T TTAAC GTA TT T A C CCAAC T GTA T C GGAACTGAC T G TTC TT TGGCCAACCCAAATAT . C CAT A A A G GT AAAGCAAC GCA C C TAC GCAGG GTTTTTGCATT G G . CTC C A G A T G AA CT A ATG G G ATGCT CG C TGA C T T TG TA T T CGGTTT C G G ACTT A AATATAATA A C A G A T CGTCGGAAGTTTATCTATTGCAAGAGACTA AT TG G T C T G TA G T TGCA T T T T G A A TAAT AT GT ATT C A AAAAAAAAAAA T A ACT AGCATG A ATTGATTTA T T AT CA A T T G G T A A CGCGG A G C GTTT GC T G A TAA A ACAC AC T GTAATACTTGTTTTTGTAAAAACT A AG AGTT AA GAT CAAC A CAA A TA C C TA T G AT C TA A C C A C CG GGTCA G C TAA GGA G ATACGGGAATACTA C A TGGAATTATTTTTTTGTGCTGTACTGGATATTACCATTC A ATAAAAGTGTATGCG A CTGA T TGG G AAT AC CCGGGG G CC CT A G T ATGCT A G GA T C AT GC C T TAA AT AAC A AT . C GAGG A T A TC C G G TAGTT A T A
blockSeqs : AA AAAC AT A T TT TG . G G . T G . . . A . TAGCATGACCTCAAGG CCCT . . C A . AA T . . . AT C C . . . . . T AA T . . . G . C . A . . . AA T . A T AAGG A . . . . . . . . . . . . . . A . T . . . . . . TTG . . . . . . . . . . GG T G . A . ATTG T C TT C T T TG TA T . . . G G CCT A TTT A . A . . . TGGAGTTTTTATTCAAGAGTAG T T G T . . . . A . . T . . T G G T CAA T T . C . . T . . . . A T . G CT A C . . . C T . CGCGG . . . GTTT GC . . . TTA . TAGC . T GTAATACTTGTTTTTGTAAAAACT A A TGT . A CAAC A ACA T TT C C . T . . . TA . . . A . CG CAGT G C TAA TGC . GATTTT C T TGGGATTATTTTTTGTGCTTACTGGATATTTACCATTC . GAGAAG . . T GGA . AT AC GGC . . A A . . TT T . A T T . AT . C A T AAC . AT . G G A T A . C . . AGAAA . . .
blockSeqs : AC C . TA GT . . . . G . . . A . T AC . . T . . . . . . A T . G . GAC C . . . . . . . AA T T . A . TTTG C C T C T T G A T . . . G G ACT T TTT A . T . . . ATGTTACCTAAGTAT T T . G . . . . . . . . . . . . . C A A G . . . . . . . . . A . . T . . C . . . C T . TTA . . . GTT AC . . . TTT . TG . T ATTTTTATAC . A TGT . . CAAA T TA T TT T C . T . . . C . . . A . T CAGT . . G TGC . GAAA . A TGGGATTATTTTTTGTGCTTACTGGATATTTACCATTC . GAAG . . . G . AT AC G . . C . . . TC A . G T T . AT . . A T CA . A . G . . T A . . . . AGAAA . . .
blockSeqs : . . . . . . . . T . . . TTG T . . G . . T T . . . . . . CT A TTC . . A . . . GATGGATT . . . . . . . T . . . . A . A . . . . . . . . G . TG . . GTTTATA . . A . . . T TA C CA T . . . . . . T . . . A . T GGTT . . G CC . GAAA . A CTATCTTCGCCTATGTCCTTCTT . AAA . . . G . A CA G . . C . . . T A . A . C . GC . . A . A . T . C . . T A . . . . TGAT . . .
blockSeqs : . . . . . . . . . . . . . . . . . GA . . . . . . . . . . . . . . . . . G . TA . . TACTAGC . . . . . . G . . C . . . . . . . . . . . . . T GGG . . G GA . GTAA . A TCGGGATATTATTGATT . AA . . . G . . CA A . . A . . . T T . A . . . GC . . . . A . A . C . . . C . . . . T . . .
blockSeqs : . . . . . T AGG . . . A . . . . TATTTTTGTGCTCT . AA . . . . . . AA A . . A . . . T . . . . . . . . . . . . . T . . . . . .
blockSeqCons : T** C* TG TA CT** GCGGACTATTCAAGTA***************** CA*** GTT* GC TG*** GTTACTTTTTATAAGCC******* A* GT*** CA** GGGT**** AT* T**** AAC* ** AGAAA*
originalCons : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCACT-CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-T--GGAGTTT-A-CTATTGCAAGAG--TATGACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAANNCGGTGT-GAC-CT-TGTTTATAGCCGCAGT-A-TT-GATTTAT-TTTTAG-TA--AC--GGGTGTGATGTA---CTT---TTTATAAA--CCGAAAAG-TCTAGAAA-TGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAAT-AG--G--AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAA--TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTT---TCTTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTT-A--AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCTAGAAAT-TTTATTAA-T-CGTAAC
finalCons : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAATCCCT--CACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAGGCGGACTATTCAAGTA-----------------GACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTTG-GAAACA---TGT-GAC-CT-TGTT-ATAGCCGCAGT-A-TT-GATTTAT-TTTTAGTG---AC--GGGTGTGATGTTACTTTTTATAAGCC-------GAAAAG-TCTAGAAA-TGCGT---GTTG--TCT---TATGTCAACANGTTACA--TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAAT-ATATATA-TAAG-AC-AGTGACTTG-AC-GAATGGGT----AGAC-ACT-CGT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------GGA-TAT---T-T---------------T-AT----T--------ACTG-GAG----A-------------G-TTT-TG----TGTAAA-TTTG--G--AT-TTATTAAT-TTAAACG-----G--C-CGG--AC-AAACATTGT-A-AGTT-AGATTTTT----TTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTTAAC-AA-TTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACCAGAAA-T-TTTATTAA-T-CGTAAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111 111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 22222 1 1 1 1111111 1111 111 1 1 1 1 1 66666666666666666666666666666 2222222 1 11 11 2222 1 2222 11 22 1 1 11 111 11 11 1 111 11 22222 22222 1111 1 1 222222 111 555555555 1 1 222 22 6666666666666666 222 222 1 1 22 11111111 111 1 1 222 33333 333333333333 1 1 11 111 111111 11 222 111111 111 111111111 22222222222222222222222222222222222222222 1 1 11 1 2222 2 1 222 4444444444 111 1 44444444444 1 111 222222 1 333333333 1 11 22 1 1 111 333333 11111 11 111 1111 000000000000000000000000 1 44444 111 111 1 111 1 1 111 111 2222222222222222 1 88888888888888888888888888888888888888888888888888888888888888888888888888888 44444444444444444444 1111 22222 22222 111 1 1111 1 111 11 222 11 1111 1 1 333333
lowQualScore : 1 5 1 1 1 1 1 5 1 5 1 88 1 1 1 88 1 1 66666 1 1 1 1 5 5 2 5 1 1 22 0 5555555 1111 1 3 333 44 0 2 2 0 2 6 7 0 0 2 0 99999999999999999999999999999 0 1111111 0 33 11 6666 3 2222 3 7 6 33 66 22 2 2 7 6 3 6 33 555 44 6 88 3 555 6 99 6 7 33333 9 55555 0 4444 66 0 7 0 000000 1 777 7 6 555555555 3 3 555 00 5555555555555555 333 6 333 7 3 7 3 00 33333333 888 3 0 3 333 33333 777777777777 6 3 3 999 8 8 8 8 8 8 00 88 3 444 1 8 333333 00 2 555 99 3 3 99 66 3 6 999999 6 6 2 6 666 3 999999999 7 6 3 6 6 8 0 44444444444444444444444444444444444444444 88 88 0 0 3 8 8 0 0 33 6 0 1111 3 0 0 3 2 888 1 0 5555555555 66 0 55 777 2 0 77777777777 3 0 0 777 888888 0 999999999 3 0 11 88 3 6 6 6 9 5 3 44 000 777777 2 6 88888 66 6 6 6 111 6 4444 99 111111111111111111111111 3 6 9 11111 99 888 7777 1 7777 3 22 3 6 99 7 6 99 6 444 5 5 5 5 5 1 1 8 222 1 1 777 222 5 8888888888888888 1 0 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 5 77777777777777777777 5 2222 11111 5 5 99 22 00000 5 000 66 1 5 5 0 2222 5 1 5 55 7 3 77 44 5 1 222 99 111 33 77 5 7777 9 0 5 4 77 0 1 6 6 222222 6 6
lowQualScore : . . . . . . . . . . . .. . . . .. . . ..... . . . . . . . . . . .. . ....... .... . . ... .. . . . . . . . . . . . ............................. . ....... . .. .. .... . .... . . . .. .. .. . . . . . . .. ... .. . .. . ... . .. . . ..... . ..... . .... .. . . . ...... . ... . . ......... . . ... .. ................ ... . ... . . . . .. ........ ... . . . ... ..... ............ . . . ... . . . . . . .. .. . ... . . ...... .. . ... .. . . .. .. . . ...... . . . . ... . ......... . . . . . . . ......................................... .. .. . . . . . . . .. . . .... . . . . . ... . . .......... .. . .. ... . . ........... . . . ... ...... . ......... . . .. .. . . . . . . . .. ... ...... . . ..... .. . . . ... . .... .. ........................ . . . ..... .. ... .... . .... . .. . . .. . . .. . ... . . . . . . . . ... . . ... ... . ................ . . . ............................................................................. . .................... . .... ..... . . .. .. ..... . ... .. . . . . .... . . . .. . . .. .. . . ... .. ... .. .. . .... . . . . .. . . . . ...... . .
lowQualScore : 0 5 0 0 0 0 0 5 0 0 0 55 0 0 0 00 0 0 55555 0 0 0 0 5 5 5 0 0 0 00 7 0000000 2222 0 2 000 55 0 5 5 0 5 5 3 0 0 0 0 55555555555555555555555555555 2 8888888 0 88 00 3333 3 7777 7 3 7 88 88 88 5 0 3 7 3 7 00 333 77 7 33 3 333 7 33 7 3 88888 2 00000 2 8888 55 0 0 5 000000 2 555 3 7 000000000 3 3 777 77 7777777777777777 333 7 333 3 3 3 3 77 33333333 333 3 7 3 333 33333 000000000000 7 3 3 333 0 0 0 0 0 0 00 88 2 000 4 0 222222 33 5 777 22 2 2 88 33 2 7 222222 7 7 5 7 888 5 777777777 3 7 5 7 7 0 8 44444444444444444444444444444444444444444 88 88 8 0 8 0 0 8 0 88 5 0 2222 2 0 0 2 5 000 2 8 0000000000 55 8 88 555 5 0 55555555555 2 2 0 555 888888 0 000000000 2 0 00 33 3 3 7 7 2 2 7 77 222 888888 2 7 00000 00 7 7 7 000 7 8888 22 333333333333333333333333 3 7 8 77777 22 333 2222 0 8888 3 77 7 7 22 3 7 22 7 222 7 7 7 0 7 4 4 9 999 4 4 444 999 7 0000000000000000 4 7 7 99999999999999999999999999999999999999999999999999999999999999999999999999999 7 11111111111111111111 7 1111 66666 7 7 99 66 00000 7 000 44 4 7 7 7 1111 7 0 7 99 3 7 99 44 7 4 999 33 444 11 99 3 9999 0 7 0 9 99 7 4 7 7 888888 7 7
consensus : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAA-TCC--CTCACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-TGG------A--TT---TTATTGCA--AGAG--TATG-ACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACC-CCGAACGTTTT-G-GAAAC-G---TAT-GACCTTG-TT-ATAGCCGCAGT-A-TT-GATTTAT-TTTTAGTA--AC--GGGTGTGATGT--TACTT---TTTATAAA--CCGAAAAG-TCTA-GAAATGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAATA-TATATA-TAAG-AC-AGTGACTTG-ACG-AATNGGT--GGAC-ACTC-GT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------G---------------------GATAT---T-T--C-AT----TCACTG-GAG----A-------------G-TTT-TG----TGTAAATT--T--GGAT-TTATT-AATTTAAAC-----GGCCG-G---AC-AAACATTGT-A-AG-TTAGATTTT----T-TTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTTAA-AATTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACC-TGAAATTTTATTAA-T-CGTAAC
Reference ( family-288 ) : NNNNNNNNNNNNNNNGAGCGTCCNTTTGAAGATGCCCGAAANTNTCGCCAATCTNGANGCNAAACTCGGACATTTAGGATNTCTCANCAAAGAGAANAAANTCAACGNCTCATGGCACAAATTGTCCNTCNACCTTCGTGGATGTTCCNAANAAGACCANCGCTGCCTGTCATGGTNTCATAGCGGGAGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTCGACTTGCGCAAAGGCTATTGGCAGNTNCCGTTGACAGAAAGAGCCAGAGAAATNNCTGCGTTCGAATGAC-CCG-AC-GGNCTGTTCCAACTACAAAGCGAT-GCCTTTTGGAATGAAAAA-CGCGCCGGCCACCTTTCAGAG-GATGA-TCCGCTCCCTT-C----T-GC------ATGAC-CTC--A--GGATGCGAAG---CCCTTAT-ATTGA--CGATGTN-ATAAT-A-GCAG-CG--A-CACCGGGAGGAACATCTCCCATATCATG--TGCAAGTTCTTC-GACACTCTGGCAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACNCTTTGTCGTAGCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTATCTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAG--AAAGAGTTAATGA-----GGTTTTGGG--A-TGACTTGGGTTTT-ACAGAAAATTTCGTCC--GAN-TTTTTCTTCAACAGTTAGCCCAC---TTACTAACTTGCTACACAAGAAA--------CTAAATCTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATT---TCTATTCTCA---TGATG-TAGTCCAGTTCTT-TCTGC-TCCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGACGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCC----TTGC-TT-CAACAACATAGTGA-CAATGTAGACAGAGTT-GTTTCTCTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGAAATTAT-TCGAC---CATTGAGAAAGAGT-GTCTTGCATTG--TTGC-TAGCTT--ACAGC-ATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAA-TCC--CTCACATT----T--TTACATAAAATG-TCAAACAA-AA-CCAAAGACT-CACAAG-G-CGG------A-------CTATT-CA--AG----TA-G-ACAT-TGTTAT-TCAACATATTAAGGNCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTT-GTT-GATTATGTG-ATGTATAT-CA-----ATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTCC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAAGG-NGGAGGC-TGTTGTGTAC-TCG-G-TGACCGCCGAACGTTTT-G-GAAAC-A---TGT-GACCTTG-TT-ATAGCCGCAGT-A-TT-GATTTAT-TTTTAGTG--AC--GGGTGTGATGT--TACTT---TTTATAAG--CCGAAAAG-TCTA-GAAATGC-G--TGTTG--TCT---TATGTCAACANGTTA-CA-TANTTTNATACTTTCT--AGCGTGTTTCTA-AAA--TTG-AGAATA-TATATA-TAAG-AC-AGTGACTTG-ACG-AATGGGT--AGAC-ACTC-GT--GATTTTCGNACTC-T------GAA----A--GATTT-TGGGATTTAATAC------T-G-----------------------G---------------------GATAT---T-T--T-AT----T-ACTG-GAG----A-------------G-TTT-TG----TGTAAATT--T--GGAT-TTATT-AATTTAAAC-----GGCCG-G---AC-AAACATTGT-A-AG-TTAGATTTT----T-TTNAGTA-TT-AGAGAGTTGTTATTCTTGTTTTATTTTAT--TGTGCAAT-T-GT--AAATAAA--TTAGTTAACAATTCTAGA-TA--GTCTTTGTTGTT----GAATTACTGCCTTGTTATT--TCATAAAGGTAA-ATTTC-T-GACC-AGAAATTTTATTAA-T-CGTAAC
gi|1 : GAGTGTCCGTTTGAAGA-ACTCGAAATTCTCACCAATCTGGATGCCAAACTCGGACATTTAGGATCTCTCAACAAAGAGAACAAATTCAACAACTCATGACACAAATTATCCGTCCATCTTCATGGATGTTCCCAAGAAGACCACCGCTGCCTGTCATGATGTCAT-GTGGGAGATGC
gi|1 : aaaagatttcagtcaCAAATTCGACTTGCTCAAAG-CTATTGGCAGGTACCGTTGACAGAGAGAGCCAGAGAAATTTCTGCATTCG--TGACTCCG-ACTGGCCTATTCCAACTACAAGGTGAT-GCCTTTTGGAATGAAAAAACGCGCCAGCCACCTTTCAAAG-GATGA-TCCACTCCCTT-C----T-GC------ATGAC-CTTCAA--GGATGCGAAG---CC--TAT-ATTGA--CGATGTG-ATAAT-ATACAG-TG--A-CACTGGGAGGAACATCTCCAATATCATG--TGCAAGTTCTTTTGACACTCTGGAAAAAGCGAACTTGACAGTG-AACCTTGCGAAAAGTGACATTTTGTCAT-GCTACAGTAGAATATTTAGGTCA--CAAAG-TA-GGTCAAGGTTGTGTTACACCTAT-TATGGCTAAGGTGGAGGCTATTGCACA-GTTCCCGATTCCTTCGAACAAG--AAAGAGTTAATGA-----GGTTTTAGG--A-TGACTTGGGTTTT-ACAGAAA-TTCTGTCC--CAA-TTTCTCTTCAACAGTAAGCCCAC---TTACTAACTTGCTACACAAGAAG--------CTAAATTTCA-CTGGACGAAAGA-CTGT--AATGAT-CATTTGGC------AGA---ATTAAATCTATTCTCA---TGAGG-T-GTCCAGTTCTT-TCTGC--CCAGATTTCTCAAAGCAA-TTTAAGC-TTACTG-TAGATGCCAGTGAC-GTAGGA---ATCGGTG-----CTGCT----TTGT-TTTCAACAACATAGTGA-TAATGTAGACAGAGTTTGTTTCTTTATTTTTC-AAA-G-AA-CTTACAAAATGT-CAG-CGCAATTAT-TCGAC---TATTGAGAAAGAAT-GTCTTGCATTG--TTGC-TAGCTTT-ACAGCCATTTTGATGTTTATTTGAATGTTACTAT-GCATCCAA------TTCT-TGTTTTTACGGATCACAA-TCC--ACCACATT----T--TTACATAAAATG-TCAAACAA-AA-TCAAAGACT-CACAAG-G-TGGAGTTTAA-------TTATTGCAAGAG----TATG-ACAT-TGTTAT-TCAACATATTAAGGGCAAAGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGT-AG--TGAGT-GTAC----TCTGGTTGGTT-GATTATGTGCATGTATATACATGTATATGCATTTTTGTAT---TTGATGTTTCA-TGAG-----------TTTTTTC-TTATCATTA---TTGA------AAGT-TTTCA-------ATTGTCATTCAAACTTT-CTTTTAGGG-GGGAGG--TGTTGTGTAC-TTG-G-TGATCGCCGAATGTTCTAG-AAAAT-A---TAT-GACCTTGTTT-ATAACC---GT-A-TT-GATTTAT-TTTTAA-A--AC--GG--GTGATG-------T---TTTATA------GAAAAG-TCTA-GAAATGC-----GTTG--TAT---TATGTCAACAAGTTA-CA-TAAATTGATACTTTCT--AGCGTG-TTCTA-GAA--TTG-AG-ATA-TATATA-TAAG-AC-AGTGACTTG-ATG-AATAGG---AGAC-ACTC-GT--GATTTTCAGACTT-T------GAA----A--GATTG-TGCGATTTGATAC------T-G-----------------------G---------------------GA-A------T--T-A-----T-ACTG-GAA----G-------------G-TTT-TG----TGTAAA-------GGAT-TTATT-AA-TTACAC-----GGCCG-G---AC-AAACATTGT-A-AG-TTAGATTTT----TCTTTAGTA-TT-AGAGAATTGTTATTCTTGTTTTATTTTAT--TGTATAAT-T-GT--AAATAAA--TTAGTGA--AATTCTAGA-TAGTGTTTTTGTTGTT----GAATTACTG-CTTGTTCTT--TCATAAAGGTAA-ATTTC-T-GACCTTG--ATTTTATTAA-T-CGTAACcatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagcaaattcgacttgctcaaagctattggcaggtaccgttgacagagagagccagagaaatttctgcattcgtgactccgactggcctattccaactacaaggtgatgccttttggaatgaaaaaacgcgccagccacctttcaaaggatgatccactcccttctgcatgaccttcaaggatgcgaagcctatattgacgatgtgataatatacagtgacactgggaggaacatctccaatatcatgtgcaagttcttttgacactctggaaaaagcgaacttgacagtgaaccttgcgaaaagtgacattttgtcatgctacagtagaatatttaggtcacaaagtaggtcaaggttgtgttacacctattatggctaaggtggaggctattgcacagttcccgattccttcgaacaagaaagagttaatgaggttttaggatgacttgggttttacagaaattctgtcccaatttctcttcaacagtaagcccacttactaacttgctacacaagaagctaaatttcactggacgaaagactgtaatgatcatttggcagaattaaatctattctcatgaggtgtccagttctttctgcccagatttctcaaagcaatttaagcttactgtagatgccagtgacgtaggaatcggtgctgctttgttttcaacaacatagtgataatgtagacagagtttgtttctttatttttcaaagaacttacaaaatgtcagcgcaattattcgactattgagaaagaatgtcttgcattgttgctagctttacagccattttgatgtttatttgaatgttactatgcatccaattcttgtttttacggatcacaatccaccacatttttacataaaatgtcaaacaaaatcaaagactcacaaggtggagtttaattattgcaagagtatgacattgttattcaacatattaagggcaaagacaatgttattgcagatgctttgtctcgagtgtagtgagtgtactctggttggttgattatgtgcatgtatatacatgtatatgcatttttgtatttgatgtttcatgagttttttcttatcattattgaaagttttcaattgtcattcaaactttcttttaggggggaggtgttgtgtacttggtgatcgccgaatgttctagaaaatatatgaccttgtttataaccgtattgatttatttttaaaacgggtgatgttttatagaaaagtctagaaatgcgttgtattatgtcaacaagttacataaattgatactttctagcgtgttctagaattgagatatatatataagacagtgacttgatgaataggagacactcgtgattttcagactttgaaagattgtgcgatttgatactgggaattatactggaaggttttgtgtaaaggatttattaattacacggccggacaaacattgtaagttagatttttctttagtattagagaattgttattcttgttttattttattgtataattgtaaataaattagtgaaattctagatagtgtttttgttgttgaattactgcttgttctttcataaaggtaaatttctgaccttgattttattaatcgtaac
gi|10 : aaaagatttcagtcagagtgtccgtttgaagaactcgaaattctcaccaatctggatgccaaactcggacatttaggatctctcaacaaagagaacaaattcaacaactcatgacacaaattatccgtccatcttcatggatgttcccaagaagaccaccgctgcctgtcatgatgtcatgtgggagatgccatgcccattaaacagcatccgtatcgccttaatccgttaaaattacagaacatttacgatcagaagtgaaatacatgctggacatgacattattgatcaagtaaaagtgactggagctcaccatgtatttctcgtacctaaacctgatggtactttagactgtgtactgactttcgaaaagtgaattcgtcacaaaacggactcttaatccgatttccgagaattgaatgactgtattgataaaatccggaagtgccaaatttgtcagTTC-AAA-GGAA-CTTAAAAAATGG-CAA-CAAAGTAAT-TCAAT---CATT---AAATAGTGGTCTGGT-TTG--TTGT-TAG-TTGAACAGC-A-----A-------TCAAATGTTAATAA-AAATACAACGGTTTTTCT-T-TTTCTAAGGATCACAACTCC--CTCAC-CT----T--TTA-AGAAGATG-TC--------A-CTCAAGACT-C-CGAG-GATGG------A-------TT----------------------T-TGTTCT-TCAA-ACTTTAA-GTCAACTACTGTGTTATTGC-AGAT-GCATTGTCAAGAGT
gi|11 : GACTAAAAGAGTCAAAGAAGTCCCTGCATTTGAATGTC-CCG-AT-GAAC-GTTTCAGC-ACAAAACAAT-GCCTTTT-GCATGAAATT-TGTCCTGATTACC-CTCAGAG-AATGA-TTTGCTCTCTTGC----T------------------------GATGTGAAG---AC--TAC-ATTGT--TAATGTC-ATAATAA-GCAG-CGATA-CATCATG-CAAACATAT-GCATCTCATGCATGC--GTTCCTG-GACATTCTG
gi|12 : ATATA-TAAG-AC-AGTGACTTG-ATG-AATGGGT--GG-C-ACTC-GT--GATTTTC-CACTCGT------GAT----TTTGATTT-TGTGATTTA-TAC------T-GGAATTATTTTTTTGTGCTGTACTG---------------------GATAT---TAC--C-AT----TCACTG-GAG----A-------------AATTT-TG----TGTAAATT--T--GGAT-TTAAT-AATT-AACC-----GGCCT-T---AA-AAACATTGT-A-AG-TTAGAATTG----T-TTAAGTA-TT-AAAGAGT
gi|13 : GAGCGTCCTTTTAAAGATGCCCGAAAATATTGCCAATCTTGAAGCAAAACTTGGACATTT-GAATAT-TCACT--AGAGAAAAAAGTCAACGTCTCATGG--CAAATTGTCCTTCAACCTTCGT---T-TTCCAAATAAGACCAATGCTGCTTGTCATGGTTTTATAGCGGAAG-TGC
gi|14 : CAAATTTGACTTATGCAAAGGCTATTGGCAGCTTCCGTTGGCAGCATCAGCAAGGGAAATAACAGCGTTCCAA--AC-ACGCAA-GGACTGTACCAATT-TAGAGTGAT-GCCGTTTGGATTGGTAAA-TGCTTCGGCagcaca
gi|15 : TTATTTTAT--TGTGCAAT-TTGTTAAAATAAA--TTAGTGAA--ATTTTAGA-TA--GTCTTTGTTGTTG---GAATT-CTGGCTTGTTATTTCTCATAAAGGTAA-ATTTC-T-GACC-TAGTTTTTTATTAA-T-aagtttca
gi|16 : ttttttaGAG-GATGAATCCACTCCCTT-CGTCAT-GCCGCCTTATAACTTTC--A--AGACGGGAGGCCTCCCTTATGATTGAATCGATGTT-ATAAT-gcga
gi|2 : -AC-GGCCTATTCCAA-TACAAAGGTATAGCCTTTTGGAAT-AAAAA-CGCGCCA-CCACCTTTCAAAGCGATGA-TCCACTCCCTT-C----TAGC------ATGAC-CTC--AAGGGATGCGAAG---CCCTTAT-ATTGA--CACTGCACATATT-A--CAGTCG--AACACCTGGAGGAACATCTCCCAAATCATG--TGCAAGTTCTT--GA-ACTCTGGCAAAAGCAAACTTGACAGTGGAACCTTGCGAAAAGT--CCCTTTGTCGTAGCTACAG-AGAATATTTAG-TCAACCAAAG-TA-G-TCAG---TGTGTTACACCTATTTATGGCTAAGGTGGAGGCTATTGCACAAGTTCCCGATTCCTACGAACAAAGAAAAGAGT-AATGA-----GTTTTTAGG--AATGACT-GAGTTTT-ACAGAAAAATTCGTCCCCAAC-TTTTTCTTCCACAGCTAGCCCAC---T-ACTAACTTGCTA-ACAAAAAAGGAACTGACTAAATCTCATCTGGACGGAAAAGCTGTTCAATGATTCATTTGGCCAACCCAAATATATT---TCTATTCTCACATTGATGATAGTCCAGTTCTCGCCTGCGTCCAGATTTCTCAAAGCAACTTTAAGCATTACTTCTAGACGCCAGTGACCGTAAGGTACATCGGTGGCAGGCTGTCGTTTTTGCATT-CAACAACATA-TAAGCAATGTAGACAGAGTT-GTTTCTCTATTTTTCCAAA-G-AA-CTTACAAAATGTTCAGGCGGAAATATCTCGAC---TATTGAGAAAGAAT-GTCTTGCAT-GCTTTGCGTAGCTTT-ACAGC-ATTT-GA-GTT-ATTTCA---TTACTATTGCATCCAA------TTCTCTGTCTTTACGGATCACAA-TCCACTTCACATTAATATAATAACATAAA-TGCTCAAACAA-AAACCAAAGACTTCACAAGCGTCGG------AAGTTTATCTATTGCA--AGAGACTA-G-ACAT-TGTTAT-TCGACATATTAAGGTAAAGGACAATGTTATTGC-AGAT-GCTTTGTCTCGAGTGTGAG--TGAGTTGTAC----TCTGGTTTGTTTGATTATGT--ATGAAGAT--------A-GCATTCTTGTATATTTTGATGTTT-A-TGAAAAAAAAAAAAATTTTTCC-TTATCATTA---TTGA------AAGTATTTC--------ATTGTTATTCAAAACTT-TTTTTAAGGATTGAGGCATGTTGT-TAC-TTATG-TGAC-------------------------------GCTCTG-TT-ATAGC--CAGT-AGTTAGATTAAT-TTTTAGAC--AC--ACGGGTGA--------TT---TTTATA-----CGAAAAG-TCTAGGAAGTGC-AGTTGCTGAATCT---TATGTCAACAAGGT--------TCTAATACTTTCT--AGCGTGTGTCTAGAAA--TTG-AGAAC--TATATA--AAGCAC-AGT-AC-TG-ATG-AAT-GGTCAAAAC-ACTC-GT---ATTTTGGAACTC-TATACGGGAATACTA--TAATT-TGGG--TTAATCCCTATCTT-C-----------------------G---------------------CCTATGTCC-T--T-CT----T-ACTGAGAG----ATAAAAGTGTATGCG-TTTATG----CATAAATTTGT--GGATGTTATTAAATTTAACCG----GGCCGCGGCCAC-AAACATTGT-AGAGTTTAGATTTTATGCT-TTTAGTAGTTGAGAAAGTTGTTATT-TTGTTTTA-TTTAT--TG-ATAAT-T-GT--AAATAGAATTTAGTTAA-AATTCTAAT-TA--GT-GTCGTTATT----GAACT-CAGC--TGTTATT--T--TAAAGCTAA-ATTTC-T-GACC-TG-ATTTTTAGTAATT-CGTAAC
gi|3 : caacCATTG--TTGC-TAGCT---A-AGC-ATTTTGATGTTTATTTGAA-GT-ACTAT-GCA-CCAA------TTCT-TGTTTTAACG-ATCACAA-TCCA-CTCACATC----G--A-ACATAAA-TG-TCAAACAA-AA-TCAAAGACT-CACAAG---TGG------AGTTT---TTATT-CA--AGAG--TA-GGACAT--GTTATGTCAACATATTAAGGGCAAAGACAATGTTATTGCCAGATTGCTTTGTCTCGAGTGT-AG--T-AGT-GTAC----TTTGGTT-GTT-GAT-ATGTG--TGTATAT-TA-----ATGC-TTTTT-TAT---TTGATGTTTCAATGAG-----------TTTTTCCATTATCATTA---TTGA------AAGT-TTTCA---------TGTCAT-CAAACTTTTCTTTTAAGG-GGGAGG--TGTTGTGTAC-T-G-G-TGACC-CTGAATGTCTT-A-GAAA--A---TATAGACCTTG-TTTATAACC--AGTTA-TT-GATTTAT-----AGTAGCAC--GGGTG--ATGT--T---------TATA------GAAAAG-TCTA--AAATAT------TTG--TCGA--TATGTCAACAAGTTA-CAATAATT-CATACTATCT--AGCATGTT-CTG-AAA--TAG-CGAA-A-TATATA-TAA--AC-AGTGACTTG-ATG-AATAGG---AAAC-ACTC-GT--G-TTTT--AACTC-T-----------------ATAC-CGGGAATAATTAT------T------------------------------------------------AT-T---T-T--T-GTGCTCT-ACTG-GAGGAGAA-------------G-TT---G----TGTATATT--T--G-AT-TTATT-A--TTAACC-----GGC-G-G---AC-AAACATTGT-A-AG-T-AGATTTC----T-TTT-GTA-TA-GGAGA-TTGTTATTCTTGTTTTATTTTATATTGTATAATCT-GT--AAATAA---TTAGTTCA-AATTCTAGA-TA--GTGTTTGTTGTT----GAATTACTGCCTTGTT-CT--TCAT-AAGGTAA-ATGTCGTGGACC-TTA---TTTATTAA-TACGTa
gi|4 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTT-G-GAAAC-GCGGTGT-GACCTT-----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAGTG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTA-GAG-TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAGT--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTATTTTTTGTGCTTACTGGATAT---T-TACC-AT----TCACTG-GAG----A-------------A-TTT-TG----TGCAAATT--TT-GGAT-TTATT-AATTTTCAC-----GACCG-G---AA-AAACATTGTAA-AG-TTATATTTT----T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTTAACAATTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAATTTTATTAA-T-
gi|5 : -TGTTTTGTACATCG-G-TGACC-CCGTACTTTTT-G-GAAAC-GCGGTGT-GACCTT-----ATAGCCGCAGT-A-TT-GAT--GT-TTTTAGTG--AC--AGGTGTGATGTAATACTTGTTTTTGTAAAAACTGAAAGGATCTA-GAG-TGCTG--TGTTG--TCT---GATTT----ATGTAA-TA-TATTTTTATATTTT-T--AGTGTGTTTCTA-AAA--TTG-AGAATAATATATA-TAAG-AC-AGTG-CTTG-ACGGAATCAGT--GGACGACTCCGTTAAATTTTTGCACTC-T------GAA----A--GATTTCTGGGATTTAATAC------T-G-----------------------GGATTATTTTTTGTGCTTACTGGATAT---T-TACC-AT----TCACTG-GAG----A-------------A-TTT-TG----TGCAAATT--TT-GGAT-TTATT-AATTTTCAC-----GACCG-G---AA-AAACATTGTAA-AG-TTATATTTT----T-TTAAAGA-TT-AGAGAGTTG-TATCTTTTTTTTATTTTAT--TGTGCAAT-T-GT---AATAAAT-TTAGTTAACAATTTTAAATTA--GTCTTTGTTGTT----GAATT-CTGCCTTG-TATT--TCATAAAGGTAACATTTC-T-GACC-AGAAATTTTATTAA-T-
gi|6 : TGTGTAC-TTG-GGTG--CGC-GAATGTCTA-GAGAAATTA---TAT-GACCTTG-TT-TTAG--ACAG--A-TT-GATTTTTATTTTAGTA--ACACGGGTGTGAT----TACT----------AG--C--AAAAG-TCTA-GAAATGC-A---GTTG--TCTGATTATGTCAAAAGGTTAACA-TACTTCAATA-TTTCTTAAGCGTGTT-CTA-GAAATTTGCAGATTA-TATATAATAAG-ACCAGTGACTTGCATG-AATGGTT--AGAC-ACTC-GT--GATTT--GAA-TG-T------GTA----A--GATTG-TGTGATTTAAAAC------TCG-----------------------G---------------------GATAT---TAT--TGAT----T--CTG-AAGGA--A-------------G-TTT-CGCTGATGTAAATT--TAGGAAT-TTATT-A--TTAAACGCCGGGGCCG-G---ACTAAACG-TGT-A-AG-TTGTTTTTT----C-TTTAGTA-TT--GAGAGTGTTTATTC-TGTTTTATTTTAT--TAT--AAT-TCGT--AAATAAA--TTAGTC----ATTCTAG--TA--GTTTTTGTTGTTGAGGGAATTAATGCTCTGTTCTT--CAATAAAGGTAA-
gi|7 : --AAAGAGTTAATAATTAACAGTTTTGGA--A-AGAATTGGGTTTTTACAGAAAATTT-GTTC--AAGGTTTTTCATCAACAGTTAGTCCATGTATTACCAACTTGTTGCAAAAGAAA------------ATCTGA-ATGCACGAAAGA-TTG----ATGA---ATT----------------ATT---T-TATCCTAA---TG-TG-TAGCCCAGTTCTT-TCAGT-TCCAGAGTTTTC----------TAA-----ACTG-TTGATGCTAGTAAT-GTAGGA---ATCGGTG-----CTGCC----TTG---------AACATAGTGG-CAATGTAGATAAAGCT-GTTT----ATTTTTC-AAAAG-AA-CTTGAACAGTGT-CAG-CAAAATTAC-TCTAC---CATTGAAAGAGAGA-GTCTTGC------TTG----------ACAAG-ATTTTGATGTTTATTTGAATGTTACTTT-GAATCAAA------CTCT-TGTTTTTACGGATCACAA-CCC--CTCACTTA----T--TTGCATAAAATT-TCTAACAA-GA-
gi|8 : C-AAA-G-AAACTTTCAAAATAC-CAA-C--AATTAT--CTATATGCATAGAAAATGAGT-ATCTTGCTTTG--CTGT-TAGCTT---CTG----TTTGCT-TCT-CTTGAATGTTACTGT-ACTTCCAA------GTCC-T---TTT---------------------CATT----T--TCACATAGAATG-TCAAACAAGAA-CCAAAAACT-CACAAG-A-TG---------------TTACC-TA--AG----TATG-ATACATGTTG----AACATA--AA----ATAGGTAAAGTTATTTT-AGAT-GCCTTA--TTGAGGGT-GGTATAAAT-ATACTGCATTTCG-T-GTG-GATTTT-----TCCCCAT-CA-----A---A---TTG-AT---TTGATGTATCT-TCAG-----------TTT---C-TCATCCGTAACTTTGAAGCATGAAGT-TTGCATTGATTTATTGTCATTCAAACTAT-CTTATAAAA-TGGTGGCTTATTGTGCAatt
gi|9 : ATCATG--AGCATGTTCTTC-GACACTGTGACTAAAGC-----TG-CA--G-AACCTTGTGAAGAGTGACT-TCTGTCA-AGCTATCGT--AATCTTTAGGTCA--TAACGTTATAGCCAAGGTTATGTTACACCTA-CCGTAGTTAGAGTGGGTAAAATAAGA-AAGTTCCCGATTCCTACAAAC-------------AATGG-----GATTTTGGGGTA-TGAC-TGGCTTTT-ATAGAAAGTTTTGTCC--GAC-TTTTTCCTCAAGAGTTGATCCAT---T