lowQualScore : 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111 222222222222222222222222
lowQualScore : 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 6666666 1 77777777 666666 33 88888888888888888888888888888888888888888 11 333333333333 6666 99999999999999999999 4444444 4 4 1 4 1 1 66666 1 7777 777 1 55555 4 1 4 777 4 4 4 4 4 1 55 1 5555 22 22 8888888888888888888 4 4 4 4 1 4 1 4 1 55 4 1 4 44 4 4 4 4 55 22 4 4 4 4 11 4 4 4 77777777777777777777777777777777777777777777777777777 4 44 55 4 4 1 4 000000000000000000000000 222
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 5 6 6666666 7 88888888 888888 6 6 44 00000000000000000000000000000000000000000 88 555 555555555555 2 2222 2 4 22222222222222222222 8888888 55 0 0 5 0 7 7 77777 6 5 7777 000 5 22222 6 6 0 5 0 6 000 0 6 0 0 0 0 5 55 7 6 2222 11 11 6 4444444444444444444 0 0 0 0 7 0 5 0 6 7 55 0 6 5 0 66 0 0 0 6 0 55 33 0 0 6 6 0 0 22 0 0 0 99999999999999999999999999999999999999999999999999999 0 6 6 66 6 6 55 6 0 0 6 5 6 0 6 222222222222222222222222 6 222
lowQualScore : ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. . . ....... . ........ ...... . . .. ......................................... .. ... ............ . .... . . .................... ....... .. . . . . . . ..... . . .... ... . ..... . . . . . . ... . . . . . . . .. . . .... .. .. . ................... . . . . . . . . . . .. . . . . .. . . . . . .. .. . . . . . . .. . . . ..................................................... . . . .. . . .. . . . . . . . . ........................ . ...
lowQualScore : 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 0 0000000 0 00000000 000000 0 0 00 00000000000000000000000000000000000000000 55 555 000000000000 5 0000 5 0 00000000000000000000 5555555 55 0 0 0 0 0 0 00000 0 0 0000 000 0 00000 0 0 0 0 0 0 000 0 0 0 0 0 0 0 00 0 0 0000 00 00 0 0000000000000000000 0 0 0 0 0 0 0 0 0 0 00 0 0 0 0 00 0 0 0 0 0 00 00 0 0 0 0 0 0 00 0 0 0 00000000000000000000000000000000000000000000000000000 0 0 0 00 0 0 00 0 0 0 0 0 0 0 0 000000000000000000000000 0 000
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAACAAGCTCT-ATAAAT------GTAGACTT-TAATCATCTATACT---GT--TTA-AATATG--NAAGGGTC-GTAAACTCGGAA--TG--AAAA-CC----ATTGGAG--ATTGCTT-TACGACAACTG-TTAACGAACAACTGT-CAA-AA-TACACACAAATACATCAAAGCCCCCAGAACTACATGTATAAGCGTC-T---TCTATGTATGG----TCAGC--------TGCA-----ATT--ATT-TCG-----GTCGAT----------TGAANAGGAAA-TCTCGTAATTAATATAA---TCN-ACGAGTAACTC---GTC-CTCACAAGAATC-CAATTAAACATGATTTT-AAAAANATAA-CC------ATAAA--AAAGTATAT---ACATTGT-AC-NATTCTTATTTC-CA--T--GAC---AAT--TAGAATAAATTNTCTAC-GAAAA--C--AGA-GAATATAN--CTA--NTGTCGTGTTAAA--GAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGGCACGA-TTCGCTACGTAAGG-GGAAAAAAA-CTACT---NCTAT--------T-TGTTTTG----AAAA------TAT-GTTTGAAAAT-ATATTT------TTTTTTAA---AAAC-GTCAATACCATATGAT-ATA---CCCTAAAAATTCTATA---CGNTT-TT-A----TTACTCTTTT--AA----TTTAAAA-TGTCCATAA-----TA--A--CTCCG--C-ACTAC----AACAC--CGCGACTA-CTTAAAA--TTAATTCACATN-ATN--ACCGA-TCGCCT------CC--TGGCG-GT-GGGTAAATGTTCTATAATAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGTNGGG-ACTAATGGCGGAAATGATTAGGNGATACCTGCNGCAGGATTTATATCAACAGANGNATCGAGCGTCGGGATGCCTGTCGGAGTGGTAGATTTATA-GGTTGAGNGGTGTTCAGGTGTTTAATATCAATTCTGACANNGANNTTGTAATGTACTGGGGGGCTGCCACTGCAAACTAATACTGAATATCT-GACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCTAA-TGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATCA-GATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-TA-TAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAANCGGGATTTTCGCTTANTTTGNTTTGCCAGCATACATTGGNCNGCGGCCGGCTGAAGGNACGACCCCTGGGTNGACCNGATNNCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGT-CGGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACT-CTCAGATCGATCCTA-GTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACAC-TCTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGA-CAAATTATCA-CGATTA-CCTCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGC-AGATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCA-CACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACT-GTCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGT-ATTACTATAGAAGGGGGAGGT-ATAATGATGCAC-TCCGTGTC-ACTGATCTCACAAAAC-AAAGACTGTCACAACCCTAC-ATCATG--TCTAAAAGTTCAGT-GCATAGT-CATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCT
Reference ( gi|1 ) : GTAATAGCAATGTTATTTCTATATTCCAAC--CAGTCTTTGATAAATTTCACTGTA-ATTTATAATCA---ATAATTTAGTAATTATAACATA--GAAGGGTCCGTAAACTCGGAA-ATG--AAAATTT----ATTGGAGTTATTGCCTGTACAACAACTG-TCAACAAACAACTGTTCAACAA-TACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCC-T---T---TGTATGG----TCAGC--------TATA-----A----ATT-TCG-----GTTGA-----------TGAATAGG-AA-TCTCGTAAT-------A---TCG----------TC---GTC-CTCA-AAGAATT-CAGTCAAACATGATTTG-AAAAAGATAA-CC------ATTAA--AAACTATAT---CCATTGT-AC-CATTCTTATTTC-CA--T--GAC---AAT--AAGAAT-TATTG-CTAC-AAAAT--C--AGA-AAATATAT--CTA--GTGT----TTAAAC-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTACGTAAGG-GGAAAAAAG-CAACT---GCTAT--------T-TGTTTTG----AAAA------TAT-TTTTGAAAAT-ATATTT----C-TTCTTTAA---GAAC-GTCAATATAATATAAT-ATA---TTTTAAAAAGTCTATA---CGATT-TT-A----TTACTGTTTT--AA----TCTAAAC-TGTTCATAA-----CA--AATTTCCG--C-ACTAC----AACAC--CACAACTAGCTTAAAA-TTTAATACGCATA-ATA--ACTGGCCCGCTTC----GCC--TGGCG-GTGGGGTAAATATTATATAATAATTTA--CTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT--C-CCGTG--------------TGTCGGAAGC-CGC-TAATATGT----GGGCT--T-GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAAAGGAATAAT-AGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAGGT--TTAA-ATCA--TCTGACTGGGACTTT---ATGCGCTGGAG--CTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCGT-GTCATAATGAAGTC---AACCACAA-CGTTAATCCTAAATGGC---AGTTACGCGACACACCGCC-TGGGATATT-GTCAGAT--TGGCAG--CTTCTAACCCCA-TAGCAAGATG--CATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACAG-AGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-----ATT---AACACGACTCCTGGGTTG-CC--ATGTCTCAGACATACGTGGCCGTCAGTATGGTCCTTACCGATATCATAAGACAAGGTTGTCACTGTATGCCTATAGGAAGCAAAATGATCTCCAATGAAAACGAATTAGAATGGAGATGTCGTTTCTCTCTAGCTGAAAGAAAACTTGTTTGCGCCAATGAATCACACCCATTTTATGTAGCGGACTTCTGAAAAATATTTCTAAAGGAGGGTCATCCCAATCACAATTAGAAGAAACCATTACTGTGCTCGATTTTCCATGAAAACTAACAATGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAG-TGTCCGGTCATGCTCGTACATCTCTACTGG-ACAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTG-TTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATA-CAAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATG-TTTATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTTGAGTGAA
gi|6 : TCCAACAACAAGCTCT-ATAAAT------GTAGACTT-TAATCATCTATACT---GT--TTA-AATAT---GAAAGATC-GTAAACTCGGAA--TG--AAA------------------TTGCTT-TACA-CAATTG-TTAA--AACAA----------A-TATACACAAATACAGCAAA--CCCCAAAACTACATGTATAAGCGTC-T---TCTATGTATGG----TCATC--------TGCA-----TTTGTATT-ATT-----GTCGT-----------TGAAAAGG-AAATCACATAATTAATATAA---TCAAACGAGTAACTC---GTCTCTCC-A-GAATC-TAATTAAGCATAATTTT-AGAAATGTAA-C-------AT-AA--AAG-------------TGT-ACACAT-CTCATT-C-CA--T--GAC---AAT--TAGAATAAATTGTCTAC-GAAACAAC--AGA-GAAAAT-T--GTA--ATATCATATTAA---GAAAA
gi|4 : tgtaacatagaaacataatcTATAAAATATGAAAGGGTC-GTAAACTTGGAA--TG--AAAAACT----ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAAT-ACTGT------A-TAC--AAAAATACAT-AA---CTCGAGAACTA------TAAGCGTCATCA-T---TGCATGG----TCAGC--------TAC------------TT-TCG-----TTTTATTGTCGCTGGTTGAATAGGAAA-CCTCGAAAT-------AGATTCC----------CT---GT--CTCACAAGAATC-CAATTAAAGACGATTTT-GAAAAGTTAA-TC------ATAAA--AAGATATA----------T-AC-AAATCTTA-TTC-AA--T--GAC---AAT--TAGAAT-AAAAT-CTAC-GAAAG--CAAAGA-AAATAGAA--CTA--TCGT----GTAAA--GAAAAtctttggtttagattatgccaaa
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgTAAAATATG--CAAGGGTC-GTAAAATCGGAA--------------------GGAA--ATTGC----------ACT-----ACGA-CAACTGTTCAACAAATATACACAAATACATCAAAGC-TCCAGAACTA------TAGGCGTC-TATTT---TGTATGG----TCAGCTGCTTTTGTATT-----A----TTG-TCGTAACAGTAAAT----------TGAAAAGGAAA-TCTCGTTAT-------A---TAT----------TCCCTGT--CTCACAAGAATT-CAGTTAAACATGATTTT-AAAAATATAG-CC------ATAAA--AAAGTGTAC---ACATtgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|7 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgctttaatcttctagatacgtgcataaaatcccgggcaAAATTTGAAAGATGTAAAAACTCGCGAATTGAA---ATTGCTT-TACGACAATTG-TTAA---ACAAATATACAA-AA-TACA-------GC----AAACCCCCAAAACTACATGTATAATCGTC-T---TCTATGTATGGGGTCCCAGC--------TGCATTTGTATT--ATTGTCG------TTGA-----------AAAGTCGA-AA-TCACATAATTAATATAA---TCAGACGAGTAACTC---GTCTCTCC-A-GAATCATAATTAAGCATAATTTTTAGAAATATAAACC------AT-AA--AAA-----------AGTGT-AC-AATTC--ATT-C-CA--T--GAC---AAT--TAGAATAAATTT-CTACGAAAAA--C--AGAGAAATATGTAACTATCATGT----T---ACAGAAAAAattatt
gi|2 : agctctataaatgtagatggcttaatcatctatacgtgttgCTCGTAAT-------A---TAT----------TCT--GTC--TCACAAGAGTC-CAGTCAAACATGATTTG--AAAAGATAA-CCAGCCAGATTAAAGAGAGTATATATAGCATTGTGGA-CA-TCTTAATTCTCA--CTGGACATTAAT--TAGAAT-tctttggtttaggattgatgcaaca
gi|11 : ---GTA-CTCACAATAATC-CAATTAAACATGATTTT-GAAAGAATAA-AC------ATAAA--AAAGTAT-T---ACATTG----------TTATT---CAAGT--GAC---AATTGAATAA---ATTGTCTAC-GAAAA--A--AGA-GAA-ATAG--TTA--CTGTCGTGTTAAActtgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|4 : tatattaaataataataaataGTTTAGCACGA-TTCGCTACGTACGG-GGGAAAAAA-CAAC-----CTATATCATTACT-TTTTTTGTTT-ATTACTTCTCTAT-GTTTGAAAAT-ACGTGT------TTATTAAA---AAAC-GTTA-------------ATA---CCTCATAAATTC--TA---CGTTT-TT-A----ATATTCTTTTTAGA----TTTAACA-TGTTCATAA-----TA--A--CTCCG--C-A-TA-----AACA---CACGATTA-CTTAAAACTTTAATAT-CAT--ATA--ACCTACCGCCTT-------C--TGGCG-CC--GGTA---ATTCTATAATatatgcaagtctttgtatagtgattgctgaagca
gi|18 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttgTGGTACGA-TTCGCTACGTAA---GGAACAAAA-CTACCCTAACCAT--------TATGTTTgca
gi|2 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacGTAAGGAGGAAAAAAGGCTAAT---G-TAT--------T-TGTTTTGCACTAAGA------TATGTTTTGAAAAT-ATATTT-------TCTGTAG---AAACTATCAATACCATATGAT-A-A---CTC--AAAATTCC-TA---CGATT-TTTA----TTACTTTTTT--------TTTAAAA-TCTGAATAAATTTACATTAATTTCCGGTC-AC-A-----AACATAACGCGACTACCTT------TTAA-----ATG-AAC--ACCG--TCGCTCCTAGAGCCGATATCGAGTTGG-TGAATG---------AACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGTTAGG-ACTAATGA--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGTG-TAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATATCT-GACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCTAA-TGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATCA-GATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-TA-TAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG--CCCTGGGTGA-CCCGATTGCTCAGAC
gi|8 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctCT---TCTAA--------T-TGTTTTG----AAAA------TAT-GTTTCAAAAT-ACATTTTTCAT-TTTTTTAAAAGAAAA-GTCATTACCATATATT-CTACGTTTTTAGGGGGTGGGTGTTTTGATT-TT-A----T-----TTTT--AA------CA----TGTCCATAA-----TA--A--CTCCG--C----AC----AA-AC--TTTGA------TAAA----TAATTCACATT-ATATTACCGA-TCGCCT------CT--TGGCG-GT-CGGTAAtt
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttCT---TCTAA--------T-TGTTTTG-----AAA------TAT-GTTTCAAAATCATTTTT----CATTTTTTAAAAGAAAA-GTC------ATACCAT-ATA---TTC-----------TA---CGTTT-TT-AGGGGTGGGTGTTTT--GATTTTTTTTAACATGTCCATAA-----TA--A--CTCCG--C----AC----AA-AC--TTTGA------TAAAA---TAATTCACATATATT--ACCGA-TCGCCT------CT--TGGCG-GTGGtaatg
gi|12 : aatcccgcacttcaaatgattcgctacatacataaacaatgtagggggagaagaaaaccctgccattattttttttttttttcaatttCTAT--------T-TGTTTTG----AAAA------TAT-GGTTGAAATT-ATATT-------TTTGTTAA---GAAA---CAATGCCATATGATAATA----CTTAAAAATTCTACG---TGTTTGTT-A----TT-TTCTTTT--Ataataatg
gi|15 : ttattTGAAAAT-ATATTT------TTCTTACG---AAAC-ATTAATACCATATGAT-ATA---CCC-AAATATTCTA-----CGATT-TT-A----TTACTTTTTT--AA----TCTAAAA-TATTCACAA-----TA--A---TACA--CGACTACTTATAACAC--Ccatagtaactccgtacaagcaaaacatgaataaccgaccgcctcctggcggccggtaat
gi|14 : aaaGAAG--C-TGGGG-AC--ATGGCGGAAATGAT-AGAG-ATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-C--GATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT-T-CAGAT--TTAA-ATCA--TCTGACATTGACGTT---ATGTACTGGGG--CTGTCATTACAAAC-----gatcgcctcctggcggccggt
gi|19 : gCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGC-----GCT---AGAACGAC-CCTGGGTTGACCG-ATGTCTCAGACAtg
gi|3 : TGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGT-CGGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACT-CTCAGATCGATCCTA-GTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACAC-TCTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGA-CAAATTATCA-CGATTA-CCTCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGC-AGATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCA-CACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACT-GTCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGT-ATTACTATAGAAGGGGGAGGT-ATAATGATGCAC-TCCGTGTC-ACTGATCTCACAAAAC-AAAGACTGTCACAACCCTAC-ATCATG--TCTAAAAGTTCAGT-GCATAGT-CATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCT
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): ACAACTTCCACGCAAACGGTAAAACTTGAAAACTGGTGTGTTTCTTTTAACAAAAATCTTGTGGATTTGAAATGAACAATATTGAAGGCCTGTGTGGTTACAAAGCTAGCTTATAATGCGGATAAATTGATGTAGCCCAGCTCTGATAAATGTAAGATGCTTTAAATCATCTGGCGTTTACAAGTATACAAATTGCACAAACACAATATACA
Unaligned ( gi|13 ): AATATCACAAGTGTGATTAAATGAGTACCATAATCACATTACCGTAAATATGGTTCTGTAAAGATAACCATAAAAGTATACACGTCTTATTTCATAACAATTAGAAGGAATCTCTACGAAAACTAACCATCGTGTTGAATAAATTCTTTGTTTTACATG
Unaligned ( gi|16 ): GGAACGTTAATACTTTACCTAGAAATCTACATTTCTATTAAATCATTTTGTATTTAACAACATCTAATAACATATAATCCGCACACACACGCTACGGTAAAACTTTCAATTCGTATAACCGACAGCCTCCTGGC
Unaligned ( gi|17 ): TAGGGACGGTTTACGTTACTTATAAATTCTACGTTTTTATTGTGTGTTTTTTTTTTATTCAACATCCGCACAAACATGCCACTAACGTTACTTAAAACTAACCGACCGCCTCCTGGCGACCA
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 1111111111111111111 11111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 1 33333333333333 1 11 22222 11 11 88888888888888888888 0000000000000000000 1 11 333333 111 1111 888888888888888888888 22222 11 77777777777777777777 1 1111111 66666666666 1 111 1111 111111 111 2222222 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 222222222 1111 22222222222222 11 111111 111 7777777777777 22 222222222222 3333333333333333333 11111111 222222222 22222222222222222222222222222222222222222222222222222222222222 111111111 22 222222 11 111 2222 333 22 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 333 11 11 33 111 11 2 55555 33 2 66666666666666666 1 333333 2 111 2 33 333 1 11111 2 222 1 222 1 2 222 22 2 1 1 11 11 1 2 222 11 2222 333333 2 1 222 11 222 333 1 2 22 1 1 22222 11 333 222 66666666666666 22 1 2 1 1 2 2 2222 333 1 2 1 1 333 2 2 1 1 2 22 1 22 2 11 2 2 2 1 2 1 11 1 2 2 1 2 2 1 22 2 2 2 2 2 1 2 22 222 1 2 2 1 1 1 11 1 1 22 1 2 1 22222 4444 4444
lowQualScore : 99999 0 66666666666666 0 7 33 88888 33 8 8 1 3 8 11 00000000000000000000 8 3 7777777777777777777 2 0 0 99 5 0 222222 000 7777 999999999999999999999 00000 0 1 11 0 1 88888888888888888888 5 9 5 5 1 5 1 6666666 6 5 0 888 55555555555 5 66 88888 000 2222 555555 77 5 77 000 0 4444444 9999 888 0 888 5 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3 0 3 2 777777777 1111 0 5 88888888888888 5 5 33 666666 9 777 55 0 0000000000000 55 1 4 4 888888888888 88 5555555555555555555 0 2 66666666 000000000 4 33333333333333333333333333333333333333333333333333333333333333 4 66 777777777 5 00 333333 88 666 4 9999 4 555 2 77 88 66 3333333 2 4 4 2222 00000000000000 5 5 2 3333 5555 111 2 5 555 88 44 00 999 44 77 3 11 11111 00 1 1 3 22222222222222222 6 2 111111 1 3 777 3 00 22 22 777 6 2 0 0 77 99999 0 88 000 3 2 5 4 333 111 3 5 88 0 000 77 0 5 3 5 88 3 77 2 5 3 0 111 88 4 2222 999999 0 5 000 2 77 4 4 2 111 111 3 88 5 3 0 77 5 5 77777 77 7 0 888 111 333 1 6 7 1 1 99999999999999 22 4 7 7 22 5 5 2 0 4 4 55 0 2 9999 555 3 5 0 5 2 5 555 0 0 5 5 0 2 22 4 2 5 2 3 77 2 0 2 88 0 0 0 5 4 0 3 5 4 88 5 2 0 0 5 0 0 5 77 4 0 0 0 0 0 5 0 77 111 5 0 2 0 5 5 5 88 5 5 33 5 0 2 5 55555 2222 3 2222 2 4
lowQualScore : ..... . .............. . . .. ..... .. . . . . . .. .................... . . ................... . . . .. . . ...... ... .... ..................... ..... . . .. . . .................... . . . . . . . ....... . . . ... ........... . .. ..... ... .... ...... .. . .. ... . ....... .... ... . ... . ............................................................................................... . . . . ......... .... . . .............. . . .. ...... . ... .. . ............. .. . . . ............ .. ................... . . ........ ......... . .............................................................. . .. ......... . .. ...... .. ... . .... . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. .. .. ... .. .. . .. ..... .. . . . ................. . . ...... . . ... . .. .. .. ... . . . . .. ..... . .. ... . . . . ... ... . . .. . ... .. . . . . .. . .. . . . . ... .. . .... ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . ... ... ... . . . . . .............. .. . . . .. . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . . . . . . . .. . . .. . . . . ..... .... . .... . .
lowQualScore : 77777 0 55555555555555 0 0 88 55555 88 0 0 0 2 0 00 66666666666666666666 0 2 2222222222222222222 8 0 6 00 0 8 000000 444 0000 222222222222222222222 88888 8 0 00 8 4 00000000000000000000 2 2 7 0 0 0 4 2222222 5 0 1 888 22222222222 7 44 99999 000 1111 666666 99 7 99 000 1 6666666 9999 666 7 000 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 7 3 5 222222222 0000 6 7 33333333333333 7 7 66 777777 1 555 22 4 7777777777777 99 0 4 4 111111111111 11 0000000000000000000 9 7 11111111 888888888 4 00000000000000000000000000000000000000000000000000000000000000 4 11 888888888 0 77 000000 55 000 0 0000 0 000 5 55 55 00 0000000 5 0 0 5555 00000000000000 5 0 5 5555 0000 555 5 0 000 00 33 77 333 77 77 3 77 33333 33 0 0 3 77777777777777777 7 3 333333 0 3 777 7 77 00 00 333 7 0 7 7 33 33333 0 00 555 0 5 5 0 555 000 0 5 00 0 555 55 0 0 0 5 55 0 55 5 5 0 0 000 00 0 0000 555555 0 0 000 5 55 0 0 5 000 000 0 00 5 0 0 55 0 5 55555 55 3 7 333 333 777 0 7 3 0 0 77777777777777 33 0 3 0 00 5 0 5 0 0 0 55 0 5 5555 000 0 5 0 5 5 5 000 0 0 5 5 0 5 55 0 5 0 5 0 55 5 0 5 00 0 0 0 0 0 0 0 5 0 55 0 5 0 0 0 0 0 5 55 0 0 0 0 0 0 0 0 55 000 5 0 5 0 5 5 0 00 5 0 00 5 0 5 0 00000 5555 0 5555 5 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCT-ATAAAT------GTAGAC--TT-TAATCATCTA--TACGT---GT--TTA-AA-TATGAAAGGGTC-GTAAA--CTCGGAA-TG-AAAA-T-ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATT-TCGT----GTC---GATTGAAAAG--GAAATCTCGTAATTAATATAATC-G---AGTAACTCGT-CTCACAAGAATC-CAGTTAAACATGA-TTTTGAAAAGAT-AACCA-------TAAA-AAAGTATACA---CATTGT--AC-A-TCTTATTTC-CA--T--GAC---AATTAGAAT----AAAT--TGTC--TACG-AA--A---ACAGAGA-----A-ATANNT-ACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACGA-TTCGCTACGTAAGGGGGAAAAAA--C------TACT---NCTATT-TGTTTTG----AAAA------TATGTTT-GAAAAT-ATATTT--TT-----NTTNAGAA---AC-GTCAATACCATATGATA-TACCCTAAAAATTCTA--CGTTT-TT-A-----TTAN---TN-TTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------T-CCG--CACTA-AACA--C--CGC-GAC--TA-CT-TAAAA--TT---AAT-TCACAT-N-ATA--ACCGA-CCGCCT--CCTGG---------CG-GC-CGGTAAATGTT-TATAATAACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATGA-GGAAATGATTAGGCGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAAC-GGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAGGTGTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACTGGGGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCG----GCT-AAGGCACGA-CCCTGGGTTGACC-GATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAAC--AAGCTCT-ATAAAT------GTAGAC--TT-TAATCATCTA--TAC-T---GT--TTA-AA-TATGNAAGGGTC-GTAAA--CTCGGAA-TG-AAAACC-ATTGGAG--ATTGCTT-TACGACAACTGTT-AACGAACAACTGT-CAA-AATACACACAAATACATCAAAGCCCCCAGAACTACATGTATAAGCGTCTTCTATGTATGG----TCAGCTGCA-----ATTATT-TCG-----GTC---GATTGAANAG--GAAATCTCGTAATTAATATAATC-NACGAGTAACTCGTCCTCACAAGAATC-CAATTAAACATGA-TTTTAAAAANAT-AACCA-------TAAA-AAAGTATATA---CATTGT--ACNATTCTTATTTC-CA--T--GAC---AATTAGAAT----AAAT--TNTC--TACG-AA--A---ACAGAGA-----ATATANCT-ANTGTCGTGTT--AAA-GAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGGCACGA-TTCGCTACGTAAGGGGAAAAAAA--C------TACT---NCTATT-TGTTTTG----AAAA------TATGTTT-GAAAAT-ATATTT--TT-----TTTTAAAA---AC-GTCAATACCATATGATA-TACCCTAAAAATTCTATACGNTT-TT-A-----TTAC---TC-TTTT--A-ATTT-------AA-AATGTCCATAA--------TAA--C------T-CCG--CACTACAACA--C--CGC-GAC--TA-CT-TAAAA--TT---AAT-TCACAT-N-ATN--ACCGA-TCGCCT--CCTGG---------CG-GT-GGGTAAATGTTCTATAATAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-NGGGACTAATGGCGGAAATGATTAGGNGATACCTGCNGCAGGATTTATATCAACAGANGNATCGAGCGTCGGGATGCCTGTCGGAGTGGTAGATTTATA-GGTTGAGNGGTGTTCAGGTGTTTAATATCAATTCTGACANNGANNTTGTAATGTACTGGGGGGCTGCCACTGCAAACTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAANCGGGATTTTCGCTTANTTTGNTTTGCCAGCATACATTGGNCNGCGGCCGGCTGAAGGNACGACCCCTGGGTNGACCNGATNNCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGT-CGGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACT-CTCAGATCGATCCTA-GTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACAC-TCTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGA-CAAATTATCA-CGATTA-CCTCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGC-AGATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCA-CACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACT-GTCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGT-ATTACTATAGAAGGGGGAGGT-ATAATGATGCAC-TCCGTGTC-ACTGATCTCACAAAAC-AAAGACTGTCACAACCCTAC-ATCATG--TCTAAAAGTTCAGT-GCATAGT-CATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGTA-AT--TTATAATCA---A--TAA-TTTAGTAATTATAA-CATAGAAGGGTCCGTAAA--CTCGGAAATG-AAAATTTATTGGAGTTATTGCCTGTACAACAACTGTC-AACAAACAACTGTTCAACAATACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCCTT---TGTATGG----TCAGCTATA-----A--ATT-TCG-----GTT---GAT-GAATAG--GAA-TCTCGTAAT-------ATC-G---------TCGTCCTCA-AAGAATT-CAGTCAAACATGA-TTTGAAAAAGAT-AACCA-------TTAA-AAACTATATC---CATTGT--ACCATTCTTATTTC-CA--T--GAC---AATAAGAAT----TA-T--TG-C--TACA-AA--A---TCAGAAA-----ATATATCT-AGTGT----TT--AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTACGTAAGGGGAAAAAAG--C------AACT---GCTATT-TGTTTTG----AAAA------TATTTTT-GAAAAT-ATATTTC-TT-----CTTTAAGA---AC-GTCAATATAATATAATA-TATTTTAAAAAGTCTATACGATT-TT-A-----TTAC---TG-TTTT--A-ATCT-------AA-ACTGTTCATAA--------CAAATT------T-CCG--CACTACAACA--C--CAC-AAC--TAGCT-TAAAAT-TT---AAT-ACGCAT-A-ATA--ACTGGCCCGCTTCGCCTGG---------CG-GTGGGGTAAATATTATATAATAATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAAAGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGCA------TTAA--CACGACTCCTGGGTTG-CC--ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAG-TGTCCGGTCATGCTCGTACATCTCTACTGG-ACAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTG-TTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATA-CAAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATG-TTTATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|11 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaATTAA-ATAAT------AATAAATAGTACTCACAATAATC-CAATTAAACATGA-TTTTGAAAGAAT-AAACA-------TAAA-AAAGTAT-TA---CATTG----------TTATT---CAAGT--GAC---AATT-GAAT----AAAT--TGTC--TACG-AA--A---AAAGAGA-----A-ATAGTT-ACTGTCGTGTT--AAA-tgagtgaa
gi|12 : tatT---TCTATT-TGTTTTG----AAAA------TATGGTT-GAAATT-ATATTT--TT-----GTTAAGAA---AC----AATGCCATATGATAATACT-TAAAAATTCTACGTGTTTGTT-A-----TT-T---TC-TTTT--A---------------------CATAG--------TAA--C------T-CCG-----TACAA--------GC-------------AAA--------------ACATGA-ATA--ACCGA-CCGCCT--CCTGG---------CG-GC-CGGTAAatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttaTAAATATGG-TTCTGTAAAGAT-AACCA-------T--A-AAAGTATACA---CG-----------TCTTATTT--CA--T--AAC---AATTAGAAG----GAA---TCTC--TACG-AA--A---AC-------------TAACC-A---TCGTGTT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATGGCGGAAATGAT--AGAGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAGC---GATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT--TCAGAT--TTAA-ATCA--TCTGACATTGACGTT---ATGTACTGGGG--CTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAAT-ATATTT--TT-----CTTACGAA---AC-ATTAATACCATATGATA-TACCC-AAATATTCTA--CGATT-TT-A-----TTAC---TT-TTTT--A-ATCT-------AA-AATATTCACAA--------TAA-------------------TACA----------C-GAC--TA-CT-TA------T---AA-------------C--ACCGA-TCGCCT--CCTGG---------CG-GC-CGGTg
gi|16 : aaaA---AC-GTTAATACTTTA---------CCTAGAAATC---TACATTT-CT-A-----TTAAA--TCATTTT--GTATTT-------AACAACATC--TAA--------TAA--CATATAAT-CCG--CAC----ACA--C---AC-G-C--TA-CGGTAAAA--CTTTCAAT-TCG----T-ATA--ACCGA-CAGCCT--CCTGG---------C
gi|17 : ggCTTATAAATTCTA--CGTTT-TT-A-----TTGTGTGTT-TTTT-----TTT------------TATTCA--A--------CA----------T-CCG--CAC-A-AACATGC--CACTAACGTTA-CT-TAAAA--CT---AA-----------------CCGA-CCGCCT--CCTGG---------CG-
gi|18 : tagggacggtttacgttaTGGTACGA-TTCGCTACGTAA--GGAACAAAA--C------TACCCTAACCATTATGTTTacca
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCGTT--CTTTGCTTTGCCAGCATACATTGGCCAGC-----GCT---AGAACGA-CCCTGGGTTGACC-GATGTCTCAGACA
gi|2 : CTCACAAGAGTC-CAGTCAAACATGA--TTTGAAAAGAT-AACCAGCCAGATTAAAGAGAGTATATATAGCATTGTGGACA--TCTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAATACTAACAATAAG-AG--ACGCACGAAAAGTTATATATAACT-ATT---GTGTTAGAAA-GGAAA
gi|2 : ctcgtaatatattctgtGTAAGGAGGAAAAAAGGC------TAAT---G-TATT-TGTTTTGCACTAAGA------TATGTTTTGAAAAT-ATATTT--TC-----TGT-AGAA---ACTATCAATACCATATGATA--ACTC--AAAATTCC-TACGATT-TTTA-----TTAC---TT-TTTT-----TTT-------AA-AATCTGAATAAATTTACATTAA--T------TTCCGGTCAC-A-AACA--TAACGC-GAC--TA-CC-T-------------T-TTAAAT-G-AAC--ACCG--TCGC-T--CCTAGAGCCGATATCGAGT-TGGTGAATG---------AACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATGA--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGTG-TAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG--CCCTGGGT-GACCCGATTGCTCAGACgctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGT-CGGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACT-CTCAGATCGATCCTA-GTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACAC-TCTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGA-CAAATTATCA-CGATTA-CCTCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGC-AGATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCA-CACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACT-GTCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGT-ATTACTATAGAAGGGGGAGGT-ATAATGATGCAC-TCCGTGTC-ACTGATCTCACAAAAC-AAAGACTGTCACAACCCTAC-ATCATG--TCTAAAAGTTCAGT-GCATAGT-CATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCT-CTAGAT------G----C--TT-TAATCACCTAGATACGT---GT--ATA-AAATATGAAAGGGTC-GTAAA--CTTGGAA-TGAAAAACT-ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAAT-ACTG--------TATACAAAAATACAT-AA---CTCGAGAAC------TATAAGCGTCATCATTGCATGG----TCAGCTACT-----TTCGTT-TTATT---GTCGCTGGTTGAATAG--GAAACCTCGAAATAGAT----TC----------CCTGT-CTCACAAGAATC-CAATTAAAGACGA-TTTTGAAAAGTT-AATCA-------TAAA-AAGATATATA---CA---------AATCTTA-TTC-AA--T--GAC---AATTAGAAT----AAA----ATC--TACG-AA--A---GCAAAGA-----AAATAGA--ACTATCGTG-T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACGA-TTCGCTACGTACGGGGGAAAAAA--CAACCTATATC---ATTACT-TTTTTTGTTT-ATTACTTCTCTATGTTT-GAAAAT-ACGTGT--TT-----ATTAAAAA---AC-GTTAATACCTCAT-------------AAATTCTA--CGTTT-TT-A-----ATAT---TC-TTTTTAG-ATTT-------AA-CATGTTCATAA--------TAA--C------T-CCG--CA-TA-AACA-----CAC-GAT--TA-CT-TAAAACTTT---AATATCA----T-ATA--ACCTA-CCGCCT--TCTGG---------C--GC-CGGTAA---TTCTATAATtgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttgA-AA-TATGCAAGGGTC-GTAAA--ATCGGAA--------------GGAA--ATTGCAC-TACGACAACTGTT-------CAAC------A-AATATACACAAATACATCAAAGCTCC-AGAACTA------TAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTA---AATTGAAAAG--GAAATCTCGTTAT--ATAT--TC-C--------CT-GTC-TCACAAGAATT-CAGTTAAACATGA-TTTTAAAAATAT-AGCCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgctttaatcttctagatacgtgcataaaatcccgggcataTCCAACAAC--AAGCTCT-ATAAAT------GTAGAC--TT-TAATCATCTA--TAC-T---GT--TTA-AA-TATGAAA-GATC-GTAAA--CTCGGAA-TG-AA--------------ATTGCTT-TAC-ACAATTGTT-AA--AAC---------A-AATATACACAAATACAGCAAA--CCCCAAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTATT---------GTC---G-TTGAAAAG--GAAATCACATAATTAATATAATCAAACGAGTAACTCGT-CTCTCCAGAATC-TAATTAAGCATAA-TTTTAGAAATGT-AA-CA-------T--A-AAAGTGTACA---CA-----------TCTCA-TTC-CA--T--GAC---AATTAGAAT----AAAT--TGTC--TACG-AAACA---ACAGAGA-----AAAT-TGT-AATATCATATT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GTAGATGGCT-TAATCATCTA--TACGT---GT--TGA-AA-TTTGAAAGA--T-GTAAAAACTCG----CG-AA------TTGAA---ATTGCTT-TACGACAATTGTT-A---AAC---------A-AATATACA-AAATACAGCAAA-CCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTATT---------GTC---G-TTGAAAAGTCGAAATCACATAATTAATATAATCAGACGAGTAACTCGT-CTCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAG------------TGT--ACAATTC--A-TTC-CA--T--GAC---AATTAGAAT----AAAT--T-TC--TACGAAA--A---ACAGAGA-----A-ATATGTAACTATCATGTT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : CT---TCTAAT-TGTTTTG----AAAA------TATGTTT-CAAAAT-ACATTT--TTCATTTTTTTAAAAGAAAA-GTCATTACCATAT---------------ATTCTA--CGTTT-TT-AGGGGGTGGG---TG-TTTT--G-ATTTTATTTTTAA-CATGTCCATAA--------TAA--C------T-CCG--CAC---AA-A--C--TTT-GA---------TAAA----T---AAT-TCACAT-T-ATATTACCGA-TCGCCT--CTTGG---------CG-GT-CGGTAAtctttggtttaggattgatgcaaca
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttAA--T------TTCT---TCTAAT-TGTTTTG----AAA-------TATGTTT-CAAAATCATTTTTCATT-----TTTTAAAAGAAAA-GTCA-TACCATAT---------------ATTCTA--CGTTT-TT-AGGGG-TGGG---TG-TTTT--G-ATTTTTTTT--AA-CATGTCCATAA--------TAA--C------T-CCG--CAC---AA-A--C--TTT-GA---------TAAAA--T----AAT-TCACAT-ATATT--ACCGA-TCGCCT--CTTGG---------CG-GT--GGTAAtaatg
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): ACAACTTCCACGCAAACGGTAAAACTTGAAAACTGGTGTGTTTCTTTTAACAAAAATCTTGTGGATTTGAAATGAACAATATTGAAGGCCTGTGTGGTTACAAAGCTAGCTTATAATGCGGATAAATTGATGTAGCCCAGCTCTGATAAATGTAAGATGCTTTAAATCATCTGGCGTTTACAAGTATACAAATTGCACAAACACAATATACA
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 1 33333333333333333 1111 222 555555555555555 1 11 77777777777777777 7777777777777777777 1 444444 1111 555555555555555 11 888888888888888888888 1111111 555555555555555555 1 111 1111 111 333333333333333333333 111 1 4444444444444 333333333 11111 22222222222222 222222222222 11 7777777777777 11 22222 111 2222222222 11111111111 11111111 11111111111 11111111111111111111111111111111111111111111111111111111 11111 1 1 11 1 11 222 11 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 222 11 1 11 3333 11 111 1 33333 11 1 2222 2222222 1 22 11 22 33 1 11 222 33 11111 1 222 1 222 1 1 222 11 1 1 1 11 11 1 1 111 11 1 1 333333 1 1 222 11 222 222 1 1 11 1 1 22222 11 11 11 6666666666666 1 22 1 1 1 1 1111 222 1 1 1 1 222 1 1 1 1 1 11 1 11 1 11 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 222 1 11 1 1 1 1 11 1 1 11 1 1 1 1 11 2222 2222
lowQualScore : 99999 6 22222222222222222 6 6 4444 555 6 888888888888888 0 8 11 8 55555555555555555 8 3 9999999999999999999 8 0 8 0 666666 888 7777 22 0 222222222222222 0 1 11 0 444444444444444444444 0 5 5 5 5 1 5 1 6666666 6 5 444444444444444444 2 66 88888 000 2222 555 5 5 77 000000000000000000000 333 5 1 0 4444444444444 222222222 00000 5 88888888888888 5 5 222222222222 1 33 77 0 1111111111111 00 4 00000 111 1 5555555555 88888888888 0 2 66666666 77777777777 66 55555555555555555555555555555555555555555555555555555555 4 66 55 99 99999 3 3 88 1 5 1 1 88 1 111 1 88 88 22 3333333 1 1 1 2222 00000000000000 5 5 1 3333 5555 111 1 5 000 88 3 88 4444 44 999 3 33333 88 3 7777 8888888 6 2 00 88 00 00 3 88 1 333 00 6 99999 5 22 000 1 1 5 1 2 1 111 1 5 22 5 000 88 5 5 1 5 88 1 77 1 5 1 5 999 88 1 5 5 000000 5 5 000 1 77 1 1 1 111 111 1 22 5 1 5 77 5 5 77777 77 7 0 88 6 44 6 7 0000000000000 7 3 7 00 6 5 5 1 5 1 1 22 5 1 9999 111 1 5 5 5 1 5 000 5 5 5 5 5 1 66 1 2 5 1 2 88 1 5 1 88 5 5 5 5 1 5 1 5 1 88 5 1 5 5 5 5 5 5 77 1 5 5 5 5 5 5 5 88 111 5 66 5 5 5 5 88 5 5 66 5 5 1 5 5 66 3333 1 4444 1 1
lowQualScore : ..... . ................. . . .... ... . ............... . . .. . ................. . . ................... . . . . ...... ... .... .. . ............... . . .. . ..................... . . . . . . . . ....... . . .................. . .. ..... ... .... ... . . .. ..................... ... . . . ............. ......... ..... . .............. . . ............ . .. .. . ............. .. . ..... ... . .......... ........... . . ........ ........... .. ........................................................ . .. .. .. ..... . . .. . . . . .. . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. . .. .... .. ... . ..... .. . .... ....... . . .. .. .. .. . .. . ... .. . ..... . .. ... . . . . . . ... . . .. . ... .. . . . . .. . .. . . . . ... .. . . . ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . .. . .. . . ............. . . . .. . . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . .. . . . . .. . . .. . . . . . .. .... . .... . .
lowQualScore : 33333 0 11111111111111111 7 7 2222 777 7 000000000000000 0 0 00 0 44444444444444444 0 2 8888888888888888888 8 6 0 0 666666 000 0000 22 8 000000000000000 8 4 00 8 666666666666666666666 4 7 7 7 0 4 0 4 2222222 5 0 333333333333333333 1 44 99999 000 1111 444 7 7 99 111111111111111111111 777 7 0 0 0000000000000 777777777 00000 0 33333333333333 7 7 111111111111 0 88 55 4 4444444444444 66 4 66666 666 0 6666666666 88888888888 9 7 11111111 99999999999 11 99999999999999999999999999999999999999999999999999999999 4 11 22 22 77777 3 3 55 0 5 0 0 00 0 000 0 55 55 00 0000000 0 0 0 5555 00000000000000 5 0 0 5555 0000 555 0 0 555 00 3 33 7777 77 333 3 33333 33 3 3333 7777777 7 0 77 33 77 33 3 33 0 333 00 7 33333 0 00 555 0 0 5 0 5 0 000 0 5 00 5 555 55 0 0 0 5 55 0 55 0 5 0 5 555 00 0 0 0 000000 5 0 000 0 55 0 0 0 000 555 0 00 5 0 0 55 0 5 55555 55 3 7 33 7 33 7 3 3333333333333 3 3 3 77 7 5 0 0 5 0 0 00 5 0 0000 000 0 5 0 5 0 5 555 0 0 5 5 5 0 00 0 5 0 0 5 00 0 0 0 00 0 0 0 0 0 5 0 5 0 55 0 0 0 5 0 0 0 5 55 0 5 5 5 5 5 0 5 55 000 5 00 0 5 5 0 00 5 0 55 5 5 0 0 5 55 5555 0 0000 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGTTTA-AAA--------------TATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCGT----GTCGATTGAAAAG--GAAATCTCGTAATTAATATAAT----CGA-TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGAT-AACCA-------TAAA-AAAGTATACA---CATTG---AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----G-AAA---TATAT---ACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAAT-ATATTT---TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CCTAAAAATTC--TACG-TTTTTA-----TTAN--TNTTTT--G-A-----TTT-------AA-AATGTCCATAA--------TAA--C------T-CCG--CAC-A-AACA--C--CAC-GAC--TA-CT-TAAAA---T---AAT-TCACAT-TATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AA-GCACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGTTTA-AA---------------TATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATT-TCGT----GTCGATTGAAAAG--GAAATCTCGTAATTAATATAAT----CGAGTAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGAT-AACCA-------TAAA-AAAGTATACA---CATTGT--AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----G-AAA---TANNT---ACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACT---NCTATT-TGTTTTG----AAAA------TATGTTT-GAAAAT-ATATTT---TTN------TTNA--GAAAC-GTCAATACCATATGAT-ATACCCTAAAAATTC--TACG-TTTTTA-----TTAN--TNTTTT--G-A-----TTT-------AA-AATGTCCATAA--------TAA--C------T-CCG--CACTA-AACA--C--CGC-GAC--TA-CT-TAAAA--TT---AAT-TCACAT-NATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGGCGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAGGTGTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACTGGGGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAGGCACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGT-A-A--T--TTAT-AATCAATAATTTA-----GTAATTATAA---------------CATAGAAGGGTCCGTAAA--CTCGGAAATGAAAA--TTTATTGGAGTTATTGCCTGTACAACAACTGTC-AACAAACAACTGTTCAACAATACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCCTT---TGTATGG----TCAGCTATA-----A--ATT-TCG-----GTTGAT-GAATAG--GAA-TCTCGTAAT-------AT----CG------TCGT-CCTCA-AAGAATT-CAGTCAAACATGATTTGAA-AAAGAT-AACCA-------TTAA-AAACTATATC---CATTGT--ACCATTCTTATTTC-CA--T--GAC---AATAAGAAT----TA-TTG-CT-ACA-AA--ATCAGA-------AAA---TATAT----CTA--GTGTTT-AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTAC-------------GTAAGGGGAAAAAAG--C------AACT---GCTATT-TGTTTTG----AAAA------TATTTTT-GAAAAT-ATATTTC--TTC------TTTA--AGAAC-GTCAATATAATATAAT-ATATTTTAAAAAGTCTATACG-ATTTTA-----TTAC--TGTTTT--A-A-----TCT-------AA-ACTGTTCATAA--------CAAATT------T-CCG--CACTACAACA--C--CAC-AAC--TAGCT-TAAAAT-TT---AAT-ACGCAT-AATA--ACTGGCCCGCTTCGCCTGGCGGTGGGGTA--AATATTATAT-AAT-AATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAA-AGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-ATT-----AA--CACGACTCCTGGGTTG--CC-ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAGT-GTCCGGTCATGCTCGTACATCTCTACTGGA-CAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTGTTT-ACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATAC-AAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATGTTT-ATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|10 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaAGCTCTGATAAAT------GTAAGATGC--TT-TAAATCA----TCTG-----GCGTTTA-tgagtgaa
gi|11 : acaacttccacgcaaacggtaaaacttgaaaactggtgtgtttcttttaacaaaaatcttgtggatttgaaatgaacaatattgaaggcctgtgtggttacaaagctagcttataatgcggataaattgatgtagcccATTAA-ATAAT------AATAAATAGTAC-TCACAATAATC-CAATTAAACATGATTTTGA-AAGAAT-AAACA-------TAAA-AAAGTAT-TA---CATTG----------TTATT---CAAGT--GAC---AATT-GAAT----AAATTGTCT-ACG-AA--AAAAGA-----G-AAA---TAGTT---ACTGTCGTGTT--AAA-caagtatacaaattgcacaaacacaatataca
gi|12 : tatT---TCTATT-TGTTTTG----AAAA------TATGGTT-GAAATT-ATATTT---TTG------TTAA--GAAA----CAATGCCATATGATAATA-CTTAAAAATTC--TACG-TGTTTG-----TTAT--TTTCT-----------TTT-------A--------CATAG--------TAA--C------T-CCG--TAC-A-AGCA---------------------AA---------------ACATGAATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--Aatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttaTAAATATGGTTCTGT-AAAGAT-AACCA-------T--A-AAAGTATAC------------AC-GT-CTTATTT--CA--T--AAC---AATTAGAAG----GAATC-TCT-ACG-AA--AAC----------------TA------ACCATCGTGTT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATG-GCGGAAATGAT-AGA-GATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-C--GATG---AT--AAGTGGTAG--TTATA-GG--GAGGGG--TTCAG--ATTTAA-ATCA--TCTGACATTGACGTT---ATGTACT--GGGGCTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAAT-ATATTT---TTC------TTAC--GAAAC-ATTAATACCATATGAT-ATACCC-AAATATTC--TACG-ATTTTA-----TTAC--TTTTTT--A-A-----TCT-------AA-AATATTCACAA--------TAA--T--------------------ACA--C------GAC--TA-CT-TA------T---AAC--------------ACCGA-TCGCCT--CCTGGCGGC-CGGTg
gi|16 : aaa--GGAAC-GTTAATACTTTA---------CCTAGAAAT-C--TACA-TTTCTA-----TTAAATCATTTT--GTA-----TTT-------AACAACATC--TAA--------TAA--CATATAAT-CCG--CAC----ACA--C---AC-G-C--TA-CGGTAAAA--CTTTCAAT-TCG----TATA--ACCGA-CAGCCT--CCTGGC
gi|17 : CTTATAAATTC--TACG-TTTTTA-----TTGTG-TGTTTT--T-T-----TTT------------TATTCA--A--------CA----------T-CCG--CAC-A-AACATGC--CACTAACGTTA-CT-TAAAA--CT---AA----------------CCGA-CCGCCT--CCTGGCGAC-C
gi|18 : tagggacggtttacgttaTGGTACG-ATTCGCTAC-------------GTAA--GGAACAAAA--C------TACCCTAACCATTATGTTTa
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGCG-CT-----A--GAACGAC-CCTGGGTTGA-CCGATGTCTCAGACA
gi|2 : CTCGTAAT--ATAT--T----C--------TGT-C-TCACAAGAGTC-CAGTCAAACATGA-TTTGA-AAAGAT-AACCAGCCAGATTAAAGAGAGTATATATAGCATTGTGGAC-AT-CTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAAT--ACTAACA-AT--AAGAGACGCACG-AAAAGTTATATATAACTATTGTGTTAGAAA-GGAAAGC
gi|2 : -------------GTAAGGAGGAAAAAAGGC------TAAT---G-TATT-TGTTTTGCACTAAGA------TATGTTTTGAAAAT-ATATTT---T-C------TGTA--GAAACTATCAATACCATATGAT-A-ACTC--AAAATTCC-TACGATTTTTA-----TTAC--TTTTTT----------TTT-------AA-AATCTGAATAAATTTACATTAA--T------TTCCGGTCAC-A-AACA--TAACGC-GAC--TA-CC-T-------------T-TTAAAT-GAAC--ACCG--TCGC-T--CCTAG-AGC-CGATATCGA-GTT-GGTGAATGAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATG-A--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGT-GTAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG-C-CCTGGG-TGACCCGATTGCTCAGACtcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGTC-GGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACTC-TCAGATCGATCCTAG-TCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACT-CTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGAC-AAATTATCAC-GATTACC-TCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGCA-GATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCAC-ACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACTG-TCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGTA-TTACTATAGAAGGGGGAGGTA-TAATGATGCACT-CCGTGTCA-CTGATCTCACAAAACAAA-GACTGTCACAACCCTACA-TCATGT--CTAAAAGTTCAGTG-CATAGTC-ATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCT-CTAGAT------G-------C--TT-T-AATCA----CCTAGATACGTGTATA-AAA--------------TATGAAAGGGTC-GTAAA--CTTGGAA-TGAAAAACT--ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAATA-CTG--------TATACAAAAATACAT--AA-CTCG-AGAACTA------TAAGCGTCATCATTGCATGG----TCAGCTACTTTCGTTTTATTGTCGC------TGGTTGAATAG--GAAACCTCGAAATAGAT----T----C------CCTGT-C-TCACAAGAATC-CAATTAAAGACGATTTTGA-AAAGTT-AATCA-------TAAA-AAGATATATA---CA------A--AT-CTTA-TTC-AA--T--GAC---AATTAGAAT----AAA--ATCT-ACG-AA--AGCAAA-----GAAAA---TAGA----ACTATCGTG-T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACG-ATTCGCTAC-------------GTACGGGGGAAAAAA--CAACCTATATC---ATTACT-TTTTTTGTTT-ATTACTTCTCTATGTTT-GAAAAT-ACGTGT---TTA------TTAA--AAAAC-GTTAATACCTCAT-------------AAATTC--TACG-TTTTTA-----ATAT--TCTTTTTAG-A-----TTT-------AA-CATGTTCATAA--------TAA--C------T-CCG--CA-TA-AACA-----CAC-GAT--TA-CT-TAAAACTTT---AATATCA----TATA--ACCTA-CCGCCT--TCTGGC-GC-CGGT---AAT-TC-TAT-AAT-tgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttg--C--TT-T-AATCT----TCTAGATACGTGCATA-AAATCCCGGGCATAAAATATGCAAGGGTC-GTAAA--ATCGGAA-GGAAA----------------TTGCAC-TACGACAACTGTT-------CAAC------A-AATATACACAAATACATCAAA-GCTCCAGAACTA------TAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTAAATTGAAAAG--GAAATCTCGTTAT--ATAT--T----C------CCTGT-C-TCACAAGAATT-CAGTTAAACATGATTTTAA-AAATAT-AGCCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgTCCAACAAC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TAC-TGTTTA-AA---------------TATGAAAGA-TC-GTAAA--CTCGGAA-TGAAA----------------TTGCTT-TAC-ACAATTGTT-AA-----AAC------A-AATATACACAAATACAGCAAA-CCCC-AAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTAT-----T----GTCG-TTGAAAAG--GAAATCACATAATTAATATAATCAAACGAGTAACTCGT-C-TCTCCAGAATC-TAATTAAGCATAATTTTAG-AAATGT-AA-CA-------T--A-AAAGTGTAC------------AC-AT-CTCA-TTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AAACAACAGA-----G-AAA---ATTGT---AATATCATATT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GT-AGA--TGGCT-T-AATCA----TCTA--TACGTGTTGA-AA---------------TTTGAAAGA--T-GTAAAAACTCG----CGAA--------TTGAA---ATTGCTT-TACGACAATTGTT-AA------AC------A-AATATACA-AAATACAGCAAA-CCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTAT-----T----GTCG-TTGAAAAGTCGAAATCACATAATTAATATAATCAGACGAGTAACTCGT-C-TCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAGTGTACA----ATT-----C-A-------TTC-CA--T--GAC---AATTAGAAT----AAATT-TCT-ACGAAA--AACAGA-----G-AAA---TATGTA--ACTATCATGTT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : G-ATTCGCTACATACATAAACAATGTAAGGGGGAGAAAA--CCCT---TGCC---ATTATT-TTTTTTtctttggtttaggattgatgcaaca
gi|8 : atcccgcacttcaaattCT---TCTAAT-TGTTTTG----AAAA------TATGTTT-CAAAAT-ACATTT---TTCATTTTTTTAAAAGAAAA-GTCATTACCATAT---------------ATTC--TACG-TTTTTAGGGGGTGGG--TGTTTT--G-A-----TTTTATTTTTAA-CATGTCCATAA--------TAA--C------T-CCG--CAC---AA-A--C--TTT-GA---------TAAA----T---AAT-TCACAT-TATATTACCGA-TCGCCT--CTTGGCGGT-CGGTA--Atttttcatttcttctaattgttttgaaaatatgtttcaaaatacatttttcatttttttaaaagaaaagtcattaccatatattctacgtttttagggggtgggtgttttgattttatttttaacatgtccataataactccgcacaaactttgataaataattcacattatattaccgatcgcctcttggcggtcggtaataatg
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttAA--T------TTCT---TCTAAT-TGTTTTG----AAA-------TATGTTT-CAAAATCATTTTTCATTTT------TTAAAAGAAAA-GTCA-TACCATAT---------------ATTC--TACG-TTTTTAGGGG-TGGG--TGTTTT--G-ATTTTTTTT-------AA-CATGTCCATAA--------TAA--C------T-CCG--CAC-A-A--A--C--TTT-GA---------TAAAA---T---AAT-TCACATATATT--ACCGA-TCGCCT--CTTGGCGG--TGGTA--Ataatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 11111 11 33333333333333333 1111 444444444444444444444444 1 11 77777777777777777 7777777777777777777 1 444444 1111 7777777777 11 8888888888888888888888 1111111 5555555555555555555 1 111 1111 111 111111 22222222222 111 1 4444444444444 333333333 111 22222222222222 333333 11 4444444444444 22222 111 444444444444 11111111 222222222 999999999999999999999999999999999999999999999999999999999999 11111 1 1 11 1 11 222 11 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 222 11 1 11 3333 11 11 1 33333 11 1 1111 2222222 1 22 11 1 11 1 11 222 11 11111 1 222 1 222 1 1 222 11 1 1 1 11 11 1 1 111 11 1 1 333333 1 1 222 11 222 222 1 1 11 1 1 22222 11 11 11 6666666666666 1 22 1 1 1 1 1111 222 1 1 1 1 222 1 1 1 1 1 11 1 11 1 11 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 222 1 11 1 1 1 1 11 1 1 11 1 1 1 1 11 2222 2222
lowQualScore : 99999 55 22222222222222222 6 6 4444 444444444444444444444444 6 1 0 8 11 8 55555555555555555 8 3 9999999999999999999 8 0 8 0 666666 888 7777 22 0 4444444444 0 1 11 0 6666666666666666666666 0 5 5 5 5 1 5 1 6666666 6 5 4444444444444444444 2 66 88888 000 2222 555 5 5 77 555555 99999999999 333 5 1 0 4444444444444 888888888 444 0 5 88888888888888 5 5 000000 33 77 0 3333333333333 66 4 00000 111 1 000000000000 88 0 2 66666666 000000000 4 66 4 666666666666666666666666666666666666666666666666666666666666 4 66 55 99 99999 3 3 88 1 5 1 1 88 1 111 1 88 88 22 3333333 1 1 1 2222 00000000000000 5 5 1 3333 5555 111 1 5 000 88 3 88 4444 44 88 3 33333 88 3 9999 8888888 6 2 00 88 3 7 88 3 88 1 333 88 6 99999 5 22 000 1 1 5 1 2 1 111 1 5 22 5 000 88 5 5 1 5 88 1 77 1 5 1 5 999 88 1 5 5 000000 5 5 000 1 77 1 1 1 111 111 1 22 5 1 5 77 5 5 77777 77 7 0 88 6 44 6 7 1111111111111 7 3 7 00 6 5 5 1 5 1 1 22 5 1 9999 111 1 5 5 5 1 5 000 5 5 5 5 5 1 66 1 2 5 1 2 88 1 5 1 88 5 5 5 5 1 5 1 5 1 88 5 1 5 5 5 5 5 5 77 1 5 5 5 5 5 5 5 88 111 5 66 5 5 5 5 88 5 5 66 5 5 1 5 5 66 3333 1 4444 1 1
lowQualScore : ..... .. ................. . . .... ........................ . . . . .. . ................. . . ................... . . . . ...... ... .... .. . .......... . . .. . ...................... . . . . . . . . ....... . . ................... . .. ..... ... .... ... . . .. ...... ........... ... . . . ............. ......... ... . . .............. . . ...... .. .. . ............. .. . ..... ... . ............ .. . . ........ ......... . .. . ............................................................ . .. .. .. ..... . . .. . . . . .. . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. . .. .... .. .. . ..... .. . .... ....... . . .. .. . . .. . .. . ... .. . ..... . .. ... . . . . . . ... . . .. . ... .. . . . . .. . .. . . . . ... .. . . . ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . .. . .. . . ............. . . . .. . . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . .. . . . . .. . . .. . . . . . .. .... . .... . .
lowQualScore : 33333 88 11111111111111111 7 7 2222 000000000000000000000000 7 7 0 0 00 0 44444444444444444 0 2 8888888888888888888 8 6 0 0 666666 000 0000 22 8 0000000000 8 4 00 8 9999999999999999999999 4 7 7 7 0 4 0 4 2222222 5 0 1111111111111111111 1 44 99999 000 1111 444 7 7 99 000000 66666666666 777 7 0 0 0000000000000 000000000 000 2 0 33333333333333 7 7 777777 88 55 4 5555555555555 11 4 66666 666 0 000000000000 88 9 7 11111111 888888888 4 11 4 444444444444444444444444444444444444444444444444444444444444 4 11 22 22 77777 3 3 55 0 5 0 0 00 0 000 0 55 55 00 0000000 0 0 0 5555 00000000000000 5 0 0 5555 0000 555 0 0 555 00 3 33 7777 77 77 3 33333 33 3 0000 7777777 7 0 77 33 3 3 33 3 33 0 333 33 7 33333 0 00 555 0 0 5 0 5 0 000 0 5 00 5 555 55 0 0 0 5 55 0 55 0 5 0 5 555 00 0 0 0 000000 5 0 000 0 55 0 0 0 000 555 0 00 5 0 0 55 0 5 55555 55 3 7 33 7 33 7 3 7777777777777 3 3 3 77 7 5 0 0 5 0 0 00 5 0 0000 000 0 5 0 5 0 5 555 0 0 5 5 5 0 00 0 5 0 0 5 00 0 0 0 00 0 0 0 0 0 5 0 5 0 55 0 0 0 5 0 0 0 5 55 0 5 5 5 5 5 0 5 55 000 5 00 0 5 5 0 00 5 0 55 5 5 0 0 5 55 5555 0 0000 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC-GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGAT-AACCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAAA---TATATA--ACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTAN--TNTTTT--G-A-------TTTAA-AATGTCCATAA--------TAA--C------T-CCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TA--AA-A---T----AAT-TCGCA--TATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCGT----GTCGATTGAAAAG--GAAATCTCGTAATTAATATAATC-GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGAT-AACCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAAA---TATAT---ACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATATATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CCTAAAAATTC--TACG-TTTTTA-----TTAN--TNTTTT--G-A-------TTTAA-AATGTCCATAA--------TAA--C------T-CCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TA--AA-A---T----AAT-TCACAT-TATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGT-A-A--T--TTAT-AATCAATAATTTA-----GTAA------T--------TA-TAACATAGAAGGGTCCGTAAA--CTCGGAAATGAAAA--TTTATTGGAGTTATTGCCTGTACAACAACTGTC-AACAAACAACTGTTCAACAATACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCCTT---TGTATGG----TCAGCTATA-----A--ATT-TCG-----GTTGAT-GAATAG--GAA-TCTCGTAAT-------ATC-G----------TCGT-CCTCA-AAGAATT-CAGTCAAACATGATTTGAA-AAAGAT-AACCA-------TTAA-AAACTATATC---CATT---GTACCATTCTTATTTC-CA--T--GAC---AATAAGAAT----TA-TTG-CT-ACA-AA--ATCAGA------AAA---TATAT----CTA--GTGTTT-AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTAC-------------GTAAGGGGAAAAAAG--C------AACT---GCTATT-TGTTTTG----AAAA------TATTTTT-GAAAATATATTTCTTC------TTTA--AGAAC-GTCAATATAATATAAT-ATATTTTAAAAAGTCTATACG-ATTTTA-----TTAC--TGTTTT--A-A-------TCTAA-ACTGTTCATAA--------CAAATT------T-CCG--CACTACAACA--C--CAC-AAC--TAGC--T-TA--AA-ATT-T----AAT-ACGCAT-AATA--ACTGGCCCGCTTCGCCTGGCGGTGGGGTA--AATATTATAT-AAT-AATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAA-AGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-ATT-----AA--CACGACTCCTGGGTTG--CC-ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAG-TGTCCGGTCATGCTCGTACATCTCTACTGG-ACAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTG-TTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATA-CAAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATG-TTTATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|10 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaAGCTCTGATAAAT------GTAAGATGC--TT-TAAATCA----TCTG-----GCGT------T--------TACAAGTATtgagtgaa
gi|11 : acaacttccacgcaaacggtaaaacttgaaaactggtgtgtttcttttaacaaaaatcttgtggatttgaaatgaacaatattgaaggcctgtgtggttacaaagctagcttataatgcggataaattgatgtagcccATTAA-ATAAT--AA-----TAAATAGTAC-TCACAATAATC-CAATTAAACATGATTTTGA-AAGAAT-AAACA-------TAAA-AAAGTAT-TA---CATT---G--------TTATT---CAAGT--GAC---AATT-GAAT----AAATTGTCT-ACG-AA--AAAAGA-----GAAA---TAGTT---ACTGTCGTGTT--AAA-acaaattgcacaaacacaatataca
gi|12 : tatCTATT-TGTTTTG----AAAA------TATGGTT-GAAATTATATTT-TTG------TTAA--GAAA----CAATGCCATATGATAATA-CTTAAAAATTC--TACG-TGTTTG-----TTAT--TTTCT-------------TTTA--------CATAG--------TAA--C------T-CCG--TAC-A-AGCA-----------------------A--AACA---T----GA----------ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--Aatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttattTAAATATGGTTCTGT-AAAGAT-AACCA-------T--A-AAAGTATAC-------------AC-GT-CTTATTT--CA--T--AAC---AATTAGAAG----GAATC-TCT-ACG-AA--AAC---------------TA------ACCATCGTGTT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATG-GCGGAAATGAT-AGA-GATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-CG--ATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT-T-CAG--ATTTAA-ATCA--TCTGACATTGACGTT---ATGTACT--GGGGCTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAATATATTT-TTC------TTAC--GAAAC-ATTAATACCATATGAT-ATA-CCCAAATATTC--TACG-ATTTTA-----TTAC--TTTTTT--A-A-------TCTAA-AATATTCACAA--------TAA----------------TA-------------CAC-GAC--TA-C--T-T------A---T----AAC--------------ACCGA-TCGCCT--CCTGGCGGC-CGGTg
gi|16 : aaa--GGAAC-GTTAATAC-------T-TTA-CCTAGAAAT-C--TACA-TTTCTA-----TTAAATCATTTT--GTA-------TTTAACAACATC--TAA--------TAA--CATATAAT-CCG--CAC-A---CA--C---AC-G-C--TA-C--GGTA--AA-A---CTTTCAAT-TCG----TATA--ACCGA-CAGCCT--CCTGGC
gi|17 : TA-CTTATAAATTC--TACG-TTTTTA-----TTGTG-TGTTTT--T-T-------TTT-----TATTCA--A--------CA----------T-CCG--CAC-A-AACATGC--CACTAACGTTA-C--T-TA--AA-A---C-----------------TA--ACCGA-CCGCCT--CCTGGCGAC-C
gi|18 : tagggacggtttacgtTGGTACG-ATTCGCTAC-------------GTAA--GGAACAAAA--C------TACCCTAACCATTATGTTTa
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGCG-CT-----A-G-AACGAC-CCTGGGTTGA-CCGATGTCTCAGACA
gi|2 : CTCGTAAT--ATAT--TC-------------TGT-C-TCACAAGAGTC-CAGTCAAACATGA-TTTGA-AAAGAT-AACCAGCCAGATTAAAGAGAGTATATATAGCATTGTGG-AC-AT-CTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAAT--ACTAACA-AT--AAGAGACGCACGAAAAGTTATATATAACTATTGTGTTAGAAA-GGAAAGC
gi|2 : -------------GTAAGGAGGAAAAAAGGC------TAAT---G-TATT-TGTTTTGCACTAAGA------TATGTTTTGAAAATATATTT-T-C------TGTA--GAAACTATCAATACCATATGAT-A-A-CTCAAAATTCC--TACGATTTTTA-----TTAC--TTTTTT------------TTTAA-AATCTGAATAAATTTACATTAA--T------TTCCGGTCAC-A-AACA--TAACGC-GAC--TA-CCTT-TT--AA-A---T----GA----ACA---------CCG--TCGC-T--CCTAG-AGC-CGATATCGA-GTT-GGTGAATGAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATG-A--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGT-GTAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG-C-CCTGGG-TGACCCGATTGCTCAGACtcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGTC-GGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACTC-TCAGATCGATCCTAG-TCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACT-CTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGAC-AAATTATCAC-GATTACC-TCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGCA-GATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCAC-ACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACTG-TCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGTA-TTACTATAGAAGGGGGAGGTA-TAATGATGCACT-CCGTGTCA-CTGATCTCACAAAACAAA-GACTGTCACAACCCTACA-TCATGT--CTAAAAGTTCAGTG-CATAGTC-ATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCTC-TAGAT------G-------C--TT-T-AATCA----CCTAGATACGTGT------A--------TA-AAATATGAAAGGGTC-GTAAA--CTTGGAA-TGAAAAACT--ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAATA-CTG--------TATACAAAAATACAT--AA-CTCG-AGAACTA------TAAGCGTCATCATTGCATGG----TCAGCTACTTTCGTTTTATTGTCGC------TGGTTGAATAG--GAAACCTCGAAATAGAT----TC-----------CCTGT-C-TCACAAGAATC-CAATTAAAGACGATTTTGA-AAAGTT-AATCA-------TAAA-AAGATATATA---CA-------A--AT-CTTA-TTC-AA--T--GAC---AATTAGAAT----AAA--ATCT-ACG-AA--AGCAAA-----GAAA----ATAGA--ACTATCGTG-T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACG-ATTCGCTAC-------------GTACGGGGGAAAAAA--CAACCTATATC---ATTACT-TTTTTTGTTT-ATTACTTCTCTATGTTT-GAAAATACGTGT-TTA------TTAA--AAAAC-GTTAATACCTCAT-------------AAATTC--TACG-TTTTTA-----ATAT--TCTTTTTAG-A-------TTTAA-CATGTTCATAA--------TAA--C------T-CCG--CAT-A-AACA-----CAC-GAT--TA-C--T-TA--AA-ACTTT----AATATCA----TATA--ACCTA-CCGCCT--TCTGGC-GC-CGGT---AAT-TC-TAT-AAT-tgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttg--C--TT-T-AATCT----TCTAGATACGTGCATAAAATCCCGGGCATA-AAATATGCAAGGGTC-GTAAA--ATCGGAA-GGAAA----------------TTGCAC-TACGACAACTGTT-------CAAC------A-AATATACACAAATACATCAAA-GCTCCAGAACTA------TAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTAAATTGAAAAG--GAAATCTCGTTAT--ATAT--TC-----------CCTGT-C-TCACAAGAATT-CAGTTAAACATGATTTTAA-AAATAT-AGCCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgTCCAACAAC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TAC-TGT------T--------TA-AA-TATGAAAGA-TC-GTAAA--CTCGGAA-TGAAA----------------TTGCTT-TAC-ACAATTGTT-AA-----AAC------A-AATATACACAAATACAGCAAA-CCCC-AAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTATTGTCG----------TTGAAAAG--GAAATCACATAATTAATATAATC-AAACGAGTAACTCGT-C-TCTCCAGAATC-TAATTAAGCATAATTTTAG-AAATGT-AA-CA-------T--A-AAAGTGTAC-------------AC-AT-CTCA-TTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AAACAACAGA-----GAAA---ATTGT---AATATCATATT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GT-AGA--TGGCT-T-AATCA----TCTA--TACGTGT------T---------G-AAATTTGAAAGA--T-GTAAAAACTCG----CGAA--------TTGAA---ATTGCTT-TACGACAATTGTT-AA------AC------A-AATATACA-AAATACAGCAAA-CCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTATTGTCG----------TTGAAAAGTCGAAATCACATAATTAATATAATCAGACGAG-TAACTCGT-C-TCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAGTGTACA----ATT------C-A-------TTC-CA--T--GAC---AATTAGAAT----AAATT-TCT-ACGAAA--AACAGA-----GAAA---TATGTA--ACTATCATGTT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : G-ATTCGCTACATACATAAACAATGTAAGGGGGAGAAAA--CCCT---TGCC---ATTATT-TTTTTTtctttggtttaggattgatgcaaca
gi|8 : atcccgcacttcaaattCTAAT-TGTTTTG----AAAA------TATGTTT-CAAAATACATTT-TTCATTTTTTTAAAAGAAAA-GTCATTACCATAT---------------ATTC--TACG-TTTTTAGGGGGTGGG--TGTTTT--G-ATTTTATTTTTAA-CATGTCCATAA--------TAA--C------T-CCG--CAC-A-AAC------------------T--T-TGATAA-A---T----AAT-TCACAT-TATATTACCGA-TCGCCT--CTTGGCGGT-CGGTA--Atttttcatttcttctaattgttttgaaaatatgtttcaaaatacatttttcatttttttaaaagaaaagtcattaccatatattctacgtttttagggggtgggtgttttgattttatttttaacatgtccataataactccgcacaaactttgataaataattcacattatattaccgatcgcctcttggcggtcggtaataatg
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttcttCTAAT-TGTTTTG----AAA-------TATGTTT-CAAAAT-CATTT-TTCATTTT-TTAAAAGAAAA-GTCA-TACCATAT---------------ATTC--TACG-TTTTTAGGGG-TGGG--TGTTTT--G-ATTTTT--TTTAA-CATGTCCATAA--------TAA--C------T-CCG--CAC-A-A--A--C--TTT-GA-----------TA--AA-A---T----AAT-TCACATATATT--ACCGA-TCGCCT--CTTGGCGG--TGGTA--Ataatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 11 33333333333333333 1111 444444444444444444444444 1 11 77777777777777777 7777777777777777777 1 444444 1111 5555555555 11 8888888888888888888888888 1111111 5555555555555555 1 111 1111 111 1111111111111 111 1 4444444444444 333333333 111 22222222222222 333333 11 4444444444444 22222 1111 1111 22222222222 11111111 222222222 00000000000000000000000000000000000000000000000000000000 11111 1 1 11 1 11 222 11 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 222 11 1 11 3333 11 11 1 33333 11 1 1111 2222222 1 22 11 1 11 1 11 222 11 11111 1 222 1 222 1 1 222 11 1 1 1 11 11 1 1 111 11 1 1 333333 1 1 222 11 222 222 1 1 11 1 1 22222 11 11 11 6666666666666 1 22 1 1 1 1 1111 222 1 1 1 1 222 1 1 1 1 1 11 1 11 1 11 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 222 1 11 1 1 1 1 11 1 1 11 1 1 1 1 11 2222 2222
lowQualScore : 99999 55 22222222222222222 6 6 4444 444444444444444444444444 6 1 0 8 11 8 55555555555555555 8 3 9999999999999999999 8 0 8 0 666666 888 7777 22 0 6666666666 0 1 11 0 6666666666666666666666666 0 5 5 5 5 1 66 6666666 6 5 0000000000000000 66 2 66 88888 000 2222 555 5 5 77 8888888888888 5555 1 333 5 1 0 4444444444444 888888888 444 0 5 88888888888888 5 5 000000 33 77 0 0000000000000 66 4 00000 1111 1 5555 99999999999 0 2 66666666 555555555 66 4 4 44444444444444444444444444444444444444444444444444444444 4 66 55 99 99999 3 3 88 1 5 1 1 88 1 111 1 88 88 22 3333333 1 1 1 2222 00000000000000 5 5 1 3333 5555 111 1 5 000 88 3 88 4444 44 88 3 33333 88 3 9999 8888888 6 2 00 88 3 7 88 3 88 1 333 88 6 99999 5 22 000 1 1 5 1 2 1 111 1 5 22 5 000 88 5 5 1 5 88 1 77 1 5 1 5 999 88 1 5 5 000000 5 5 000 1 77 1 1 1 111 111 1 22 5 1 5 77 5 5 77777 77 7 0 88 6 44 6 7 1111111111111 7 3 7 00 6 5 5 1 5 1 1 22 5 1 9999 111 1 5 5 5 1 5 000 5 5 5 5 5 1 66 1 2 5 1 2 88 1 5 1 88 5 5 5 5 1 5 1 5 1 88 5 1 5 5 5 5 5 5 77 1 5 5 5 5 5 5 5 88 111 5 66 5 5 5 5 88 5 5 66 5 5 1 5 5 66 3333 1 4444 1 1
lowQualScore : ..... .. ................. . . .... ........................ . . . . .. . ................. . . ................... . . . . ...... ... .... .. . .......... . . .. . ......................... . . . . . . .. ....... . . ................ .. . .. ..... ... .... ... . . .. ............. .... . ... . . . ............. ......... ... . . .............. . . ...... .. .. . ............. .. . ..... .... . .... ........... . . ........ ......... .. . . ........................................................ . .. .. .. ..... . . .. . . . . .. . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. . .. .... .. .. . ..... .. . .... ....... . . .. .. . . .. . .. . ... .. . ..... . .. ... . . . . . . ... . . .. . ... .. . . . . .. . .. . . . . ... .. . . . ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . .. . .. . . ............. . . . .. . . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . .. . . . . .. . . .. . . . . . .. .... . .... . .
lowQualScore : 33333 88 11111111111111111 7 7 2222 000000000000000000000000 7 7 0 0 00 0 44444444444444444 0 2 8888888888888888888 8 6 0 0 666666 000 0000 22 8 2222222222 8 4 00 8 9999999999999999999999999 4 7 7 7 0 4 44 2222222 5 0 3333333333333333 44 1 44 99999 000 1111 444 7 7 99 1111111111111 6666 7 777 7 0 0 0000000000000 000000000 000 2 0 33333333333333 7 7 777777 88 55 4 3333333333333 11 4 66666 6666 0 2222 99999999999 9 7 11111111 222222222 11 4 4 00000000000000000000000000000000000000000000000000000000 4 11 22 22 77777 3 3 55 0 5 0 0 00 0 000 0 55 55 00 0000000 0 0 0 5555 00000000000000 5 0 0 5555 0000 555 0 0 555 00 3 33 7777 77 77 3 33333 33 3 0000 7777777 7 0 77 33 3 3 33 3 33 0 333 33 7 33333 0 00 555 0 0 5 0 5 0 000 0 5 00 5 555 55 0 0 0 5 55 0 55 0 5 0 5 555 00 0 0 0 000000 5 0 000 0 55 0 0 0 000 555 0 00 5 0 0 55 0 5 55555 55 3 7 33 7 33 7 3 7777777777777 3 3 3 77 7 5 0 0 5 0 0 00 5 0 0000 000 0 5 0 5 0 5 555 0 0 5 5 5 0 00 0 5 0 0 5 00 0 0 0 00 0 0 0 0 0 5 0 5 0 55 0 0 0 5 0 0 0 5 55 0 5 5 5 5 5 0 5 55 000 5 00 0 5 5 0 00 5 0 55 5 5 0 0 5 55 5555 0 0000 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC----GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC----GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATATAACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGT-A-A--T--TTAT-AATCAATAATTTA-----GTAA------T--------TA-TAACATAGAAGGGTCCGTAAA--CTCGGAAATGAAAA--TTTATTGGAGTTATTGCCTGTACAACAACTGTC-AACAAACAACTGTTCAACAATACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCCTT---TGTATGG----TCAGCTATA-----A--ATT-TCG-----GTTGAT-GAATAG--GAA-TCTCGTAAT-------ATC----G----------TCGT-CCTCA-AAGAATT-CAGTCAAACATGATTTGAA-AAAGATAA-CCA-------TTAA-AAACTATATC---CATT---GTACCATTCTTATTTC-CA--T--GAC---AATAAGAAT----TA-TTG-CT-ACA-AA--ATCAGA------AA-----ATATAT--CTA--GTGTTT-AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTAC-------------GTAAGGGGAAAAAAG--C------AACT---GCTATT-TGTTTTG----AAAA------TATTTTT-GAAAATATATTTCTTC------TTTA--AGAAC-GTCAATATAATATAAT-ATATTTTAAAAAGTCTATACG-ATTTTA-----TTA-C--TGTTTT--A-ATCT-------AA-ACTGTTCATAA--------CAAATT------TCCG--CACTACAACA--C--CAC-AAC--TAGC--T-TAA--A-ATT-T----AAT-ACGCA-TAATA--ACTGGCCCGCTTCGCCTGGCGGTGGGGTA--AATATTATAT-AAT-AATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAA-AGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-ATT-----AA--CACGACTCCTGGGTTG--CC-ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAGT-GTCCGGTCATGCTCGTACATCTCTACTGGA-CAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTGTTT-ACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATAC-AAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATGTTT-ATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|10 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaAGCTCTGATAAAT------GTAAGATGC--TT-TAAATCA----TCTG-----GCGT------T--------TACAAGTATtgagtgaa
gi|11 : acaacttccacgcaaacggtaaaacttgaaaactggtgtgtttcttttaacaaaaatcttgtggatttgaaatgaacaatattgaaggcctgtgtggttacaaagctagcttataatgcggataaattgatgtagcccATTAA-ATAAT-----AA-----TAAATAGTAC-TCACAATAATC-CAATTAAACATGATTTTGA-AAGAATAA-ACA-------TAAA-AAAGTAT-TA---CATT---G--------TTATT---CAAGT--GAC---AATT-GAAT----AAATTGTCT-ACG-AA--AAAAGA-----GAA-----ATA-GTTACTGTCGTGTT--AAA-acaaattgcacaaacacaatataca
gi|12 : tatCTATT-TGTTTTG----AAAA------TATGGTT-GAAATTATATTT-TTG------TTAA--GAAA----CAATGCCATATGATAATA-CTTAAAAATTC--TACG-TGTTTG-----TTA-T--TTTCT------TTT-------A--------CATAG--------TAA--C------TCCG--TAC-A-AGCA-----------------------AA--ACA---T----GA----------ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--Aatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttattTAAATATGGTTCTGT-AAAGATAA-CCA-------T--A-AAAGTATAC-------------AC-GT-CTTATTT--CA--T--AAC---AATTAGAAG----GAATC-TCT-ACG-AA--AAC---------------------TAACCATCGTGTT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATG-GCGGAAATGAT-AGA-GATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-CG--ATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT-T-CAG--ATTTAA-ATCA--TCTGACATTGACGTT---ATGTACT--GGGGCTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAATATATTT-TTC------TTAC--GAAAC-ATTAATACCATATGAT-ATA-CCCAAATATTC--TACG-ATTTTA-----TTA-C--TTTTTT--A-ATCT-------AA-AATATTCACAA--------TAA---------------TA-------------CAC-GAC--TA-C--T-T------A---T----AAC--------------ACCGA-TCGCCT--CCTGGCGGC-CGGTg
gi|16 : aaa--GGAAC-GTTAATAC-------T-TTA-CCTAGAAAT-C--TACA-TTTCTA-----TTA-AATCATTTT--GTATTT-------AACAACATC--TAA--------TAA--CATATAATCCG--CAC-A---CA--C---AC-G-C--TA-C--GGTAA--A-A---CTTTCAAT-TCG---T-ATA--ACCGA-CAGCCT--CCTGGC
gi|17 : TA-CTTATAAATTC--TACG-TTTTTA-----TTGTG--TGTTTT--T-TTTT------------TATTC--AA--------CA----------TCCG--CAC-A-AACATGC--CACTAACGTTA-C--T-TAA--A-A---C-----------------TA--ACCGA-CCGCCT--CCTGGCGAC-C
gi|18 : tagggacggtttacgtTGGTACG-ATTCGCTAC-------------GTAA--GGAACAAAA--C------TACCCTAACCATTATGTTTa
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGCG-CT-----A-G-AACGAC-CCTGGGTTGA-CCGATGTCTCAGACA
gi|2 : CTCGTAAT--ATAT--TC----------------TGT-C-TCACAAGAGTC-CAGTCAAACATGA-TTTGA-AAAGATAA-CCAGCCAGATTAAAGAGAGTATATATAGCATTGTGG-AC-AT-CTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAAT--ACTAACA-AT--AAGAGACGCACGAAAAGTTATATATAACTATTGTGTTAGAAA-GGAAAGC
gi|2 : -------------GTAAGGAGGAAAAAAGGC------TAAT---G-TATT-TGTTTTGCACTAAGA------TATGTTTTGAAAATATATTT-T-C------TGTA--GAAACTATCAATACCATATGAT-A-A-CTCAAAATTCC--TACGATTTTTA-----TTA-C--TTTTTT-----TTT-------AA-AATCTGAATAAATTTACATTAAT-T------TCCGGTCAC-A-AACA--TAACGC-GAC--TA-CCTT-TTA--A-A---T----GA----AC---------ACCG--TCG-CT--CCTAG-AGC-CGATATCGA-GTT-GGTGAATGAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATG-A--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGT-GTAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG-C-CCTGGG-TGACCCGATTGCTCAGACtcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGTC-GGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACTC-TCAGATCGATCCTAG-TCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACT-CTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGAC-AAATTATCAC-GATTACC-TCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGCA-GATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCAC-ACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACTG-TCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGTA-TTACTATAGAAGGGGGAGGTA-TAATGATGCACT-CCGTGTCA-CTGATCTCACAAAACAAA-GACTGTCACAACCCTACA-TCATGT--CTAAAAGTTCAGTG-CATAGTC-ATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCTC-TAGAT------G-------C--TT-T-AATCA----CCTAGATACGTGT------A--------TA-AAATATGAAAGGGTC-GTAAA--CTTGGAA-TGAAAAACT--ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAATA-CTG--------TATACAAAAATACAT--AA-CTCG-AGAACTA------TAAGCGTCATCATTGCATGG----TCAGCTACTTTCGTTTTATTGTCG------CTGGTTGAATAG--GAAACCTCGAAATAGAT----TC--------------CCTGT-C-TCACAAGAATC-CAATTAAAGACGATTTTGA-AAAGTTAA-TCA-------TAAA-AAGATATATA---CA-------A--AT-CTTA-TTC-AA--T--GAC---AATTAGAAT----AAA--ATCT-ACG-AA--AGCAAA-----GAA-----A-ATAGAACTATCGTG-T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACG-ATTCGCTAC-------------GTACGGGGGAAAAAA--CAACCTATATC---ATTACT-TTTTTTGTTT-ATTACTTCTCTATGTTT-GAAAATACGTGT-TTA------TTAA--AAAAC-GTTAATACCTCAT-------------AAATTC--TACG-TTTTTA-----ATA-T--TCTTTTTAG-ATTT-------AA-CATGTTCATAA--------TAA--C------TCCG--CAT-A-AACA-----CAC-GAT--TA-C--T-TAA--A-ACTTT----AATAT--CA-T-ATA--ACCTA-CCGCCT--TCTGGC-GC-CGGT---AAT-TC-TAT-AAT-tgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttg--C--TT-T-AATCT----TCTAGATACGTGCATAAAATCCCGGGCATA-AAATATGCAAGGGTC-GTAAA--ATCGGAA-GGAAA----------------TTGCAC-TACGACAACTGTT-------CAAC------A-AATATACACAAATACATCAAA-GCTCCAGAACTA------TAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTAAATTGAAAAG--GAAATCTCGTTAT--ATAT--TC--------------CCTGT-C-TCACAAGAATT-CAGTTAAACATGATTTTAA-AAATATAG-CCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgTCCAACAAC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TAC-TGT------T--------TA-AA-TATGAAAGA-TC-GTAAA--CTCGGAA-TGAAA----------------TTGCTT-TAC-ACAATTGTT-AA-----AAC------A-AATATACACAAATACAGCAAA-CCCC-AAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTATTGTCG----------TTGAAAAG--GAAATCACATAATTAATATAATC----AAACGAGTAACTCGT-C-TCTCCAGAATC-TAATTAAGCATAATTTTAG-AAATGTAA--CA-------T--A-AAAGTGTAC-------------AC-AT-CTCA-TTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AAACAACAGA-----GAA-----AATTGTAA-TATCATATT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GT-AGA--TGGCT-T-AATCA----TCTA--TACGTGT------T---------G-AAATTTGAAAGA--T-GTAAAAACTCG----CGAA--------TTGAA---ATTGCTT-TACGACAATTGTT-AA------AC------A-AATATACA-AAATACAGCAAA-CCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTATTGTCG----------TTGAAAAGTCGAAATCACATAATTAATATAATCAGACGAG----TAACTCGT-C-TCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAGTGTACA----ATT------C-AT-------TC-CA--T--GAC---AATTAGAAT----AAATT-TCT-ACGAAA--AACAGA-----GAA-----ATATGTAACTATCATGTT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : G-ATTCGCTACATACATAAACAATGTAAGGGGGAGAAAA--CCCT---TGCC---ATTATT-TTTTTTtctttggtttaggattgatgcaaca
gi|8 : atcccgcacttcaaattCTAAT-TGTTTTG----AAAA------TATGTTT-CAAAATACATTT-TTCATTTTTTTAAAAGAAAA-GTCATTACCATAT---------------ATTC--TACG-TTTTTAGGGGGTGG-G--TGTTTT--G-ATTTTATTTTTAA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AAC------------------T--T-TGATAA-A---T----AAT-TCACATT-ATATTACCGA-TCGCCT--CTTGGCGGT-CGGTA--Atttttcatttcttctaattgttttgaaaatatgtttcaaaatacatttttcatttttttaaaagaaaagtcattaccatatattctacgtttttagggggtgggtgttttgattttatttttaacatgtccataataactccgcacaaactttgataaataattcacattatattaccgatcgcctcttggcggtcggtaataatg
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttcttCTAAT-TGTTTTG----AAA-------TATGTTT-CAAAAT-CATTT-TTCATTTT-TTAAAAGAAAA-GTCA-TACCATAT---------------ATTC--TACG-TTTTTAGGGG-TGG-G--TGTTTT--G-ATTTTTTTT--AA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AACT--T--T---GA-----------TAA--A-A---T----AAT-TCACA-T-ATATTACCGA-TCGCCT--CTTGGCGG--TGGTA--Ataatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 11 33333333333333333 1111 444444444444444444444444 1 11 77777777777777777 7777777777777777777 1 444444 1111 5555555555 11 8888888888888888888888888 1111111 5555555555555555 1 111 1111 111 1111111111111 111 1 4444444444444 333333333 111 22222222222222 333333 11 4444444444444 22222 1111 1111 22222222222 11111111 222222222 00000000000000000000000000000000000000000000000000000000 11111 1 1 11 1 11 222 11 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 222 11 1 11 3333 11 11 1 33333 11 1 1111 2222222 1 22 11 1 11 1 11 222 11 11111 1 222 1 222 1 1 222 11 1 1 1 11 11 1 1 111 11 1 1 333333 1 1 222 11 222 222 1 1 11 1 1 22222 11 11 11 6666666666666 1 22 1 1 1 1 1111 222 1 1 1 1 222 1 1 1 1 1 11 1 11 1 11 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 222 1 11 1 1 1 1 11 1 1 11 1 1 1 1 11 2222 2222
lowQualScore : 99999 55 22222222222222222 6 6 4444 444444444444444444444444 6 1 0 8 11 8 55555555555555555 8 3 9999999999999999999 8 0 8 0 666666 888 7777 22 0 6666666666 0 1 11 0 6666666666666666666666666 0 5 5 5 5 1 66 6666666 6 5 0000000000000000 66 2 66 88888 000 2222 555 5 5 77 8888888888888 5 11 1 333 5 1 0 4444444444444 888888888 444 0 5 88888888888888 5 5 000000 33 77 0 0000000000000 66 4 00000 1111 1 5555 99999999999 0 2 66666666 555555555 66 4 4 44444444444444444444444444444444444444444444444444444444 4 66 55 99 99999 3 3 88 1 5 1 1 88 1 111 1 88 88 22 3333333 1 1 1 2222 00000000000000 5 5 1 3333 5555 111 1 5 000 88 3 88 4444 44 88 3 33333 88 3 9999 8888888 6 2 00 88 3 7 88 3 88 1 333 88 6 99999 5 22 000 1 1 5 1 2 1 111 1 5 22 5 000 88 5 5 1 5 88 1 77 1 5 1 5 999 88 1 5 5 000000 5 5 000 1 77 1 1 1 111 111 1 22 5 1 5 77 5 5 77777 77 7 0 88 6 44 6 7 1111111111111 7 3 7 00 6 5 5 1 5 1 1 22 5 1 9999 111 1 5 5 5 1 5 000 5 5 5 5 5 1 66 1 2 5 1 2 88 1 5 1 88 5 5 5 5 1 5 1 5 1 88 5 1 5 5 5 5 5 5 77 1 5 5 5 5 5 5 5 88 111 5 66 5 5 5 5 88 5 5 66 5 5 1 5 5 66 3333 1 4444 1 1
lowQualScore : ..... .. ................. . . .... ........................ . . . . .. . ................. . . ................... . . . . ...... ... .... .. . .......... . . .. . ......................... . . . . . . .. ....... . . ................ .. . .. ..... ... .... ... . . .. ............. . .. . ... . . . ............. ......... ... . . .............. . . ...... .. .. . ............. .. . ..... .... . .... ........... . . ........ ......... .. . . ........................................................ . .. .. .. ..... . . .. . . . . .. . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. . .. .... .. .. . ..... .. . .... ....... . . .. .. . . .. . .. . ... .. . ..... . .. ... . . . . . . ... . . .. . ... .. . . . . .. . .. . . . . ... .. . . . ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . .. . .. . . ............. . . . .. . . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . .. . . . . .. . . .. . . . . . .. .... . .... . .
lowQualScore : 33333 88 11111111111111111 7 7 2222 000000000000000000000000 7 7 0 0 00 0 44444444444444444 0 2 8888888888888888888 8 6 0 0 666666 000 0000 22 8 2222222222 8 4 00 8 9999999999999999999999999 4 7 7 7 0 4 44 2222222 5 0 3333333333333333 44 1 44 99999 000 1111 444 7 7 99 1111111111111 1 99 7 777 7 0 0 0000000000000 000000000 000 2 0 33333333333333 7 7 777777 88 55 4 3333333333333 11 4 66666 6666 0 2222 99999999999 9 7 11111111 222222222 11 4 4 00000000000000000000000000000000000000000000000000000000 4 11 22 22 77777 3 3 55 0 5 0 0 00 0 000 0 55 55 00 0000000 0 0 0 5555 00000000000000 5 0 0 5555 0000 555 0 0 555 00 3 33 7777 77 77 3 33333 33 3 0000 7777777 7 0 77 33 3 3 33 3 33 0 333 33 7 33333 0 00 555 0 0 5 0 5 0 000 0 5 00 5 555 55 0 0 0 5 55 0 55 0 5 0 5 555 00 0 0 0 000000 5 0 000 0 55 0 0 0 000 555 0 00 5 0 0 55 0 5 55555 55 3 7 33 7 33 7 3 7777777777777 3 3 3 77 7 5 0 0 5 0 0 00 5 0 0000 000 0 5 0 5 0 5 555 0 0 5 5 5 0 00 0 5 0 0 5 00 0 0 0 00 0 0 0 0 0 5 0 5 0 55 0 0 0 5 0 0 0 5 55 0 5 5 5 5 5 0 5 55 000 5 00 0 5 5 0 00 5 0 55 5 5 0 0 5 55 5555 0 0000 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC----GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC----GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGT-A-A--T--TTAT-AATCAATAATTTA-----GTAA------T--------TA-TAACATAGAAGGGTCCGTAAA--CTCGGAAATGAAAA--TTTATTGGAGTTATTGCCTGTACAACAACTGTC-AACAAACAACTGTTCAACAATACATAAAAATGCGTCAAAACCTCCAAAACTA------TAAACGCCTT---TGTATGG----TCAGCTATA-----A--ATT-TCG-----GTTGAT-GAATAG--GAA-TCTCGTAAT-------ATC----G----------TCGT-CCTCA-AAGAATT-CAGTCAAACATGATTTGAA-AAAGATAA-CCA-------TTAA-AAACTATATC---CATT---GTACCATTCTTATTTC-CA--T--GAC---AATAAGAAT----TA-TTG-CT-ACA-AA--ATCAGA------AA-----ATATAT--CTA--GTGTTT-AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTAC-------------GTAAGGGGAAAAAAG--C------AACT---GCTATT-TGTTTTG----AAAA------TATTTTT-GAAAATATATTTCTTC------TTTA--AGAAC-GTCAATATAATATAAT-ATATTTTAAAAAGTCTATACG-ATTTTA-----TTA-C--TGTTTT--A-ATCT-------AA-ACTGTTCATAA--------CAAATT------TCCG--CACTACAACA--C--CAC-AAC--TAGC--T-TAA--A-ATT-T----AAT-ACGCA-TAATA--ACTGGCCCGCTTCGCCTGGCGGTGGGGTA--AATATTATAT-AAT-AATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAA-AGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-ATT-----AA--CACGACTCCTGGGTTG--CC-ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAGT-GTCCGGTCATGCTCGTACATCTCTACTGGA-CAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTGTTT-ACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATAC-AAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATGTTT-ATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|10 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaAGCTCTGATAAAT------GTAAGATGC--TT-TAAATCA----TCTG-----GCGT------T--------TACAAGTATtgagtgaa
gi|11 : acaacttccacgcaaacggtaaaacttgaaaactggtgtgtttcttttaacaaaaatcttgtggatttgaaatgaacaatattgaaggcctgtgtggttacaaagctagcttataatgcggataaattgatgtagcccATTAA-ATAAT-----AA-----TAAATAGTAC-TCACAATAATC-CAATTAAACATGATTTTGA-AAGAATAA-ACA-------TAAA-AAAGTAT-TA---CATT---G--------TTATT---CAAGT--GAC---AATT-GAAT----AAATTGTCT-ACG-AA--AAAAGA-----GAA-----ATA-GTTACTGTCGTGTT--AAA-acaaattgcacaaacacaatataca
gi|12 : tatCTATT-TGTTTTG----AAAA------TATGGTT-GAAATTATATTT-TTG------TTAA--GAAA----CAATGCCATATGATAATA-CTTAAAAATTC--TACG-TGTTTG-----TTA-T--TTTCT------TTT-------A--------CATAG--------TAA--C------TCCG--TAC-A-AGCA-----------------------AA--ACA---T----GA----------ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--Aatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttattTAAATATGGTTCTGT-AAAGATAA-CCA-------T--A-AAAGTATAC-------------AC-GT-CTTATTT--CA--T--AAC---AATTAGAAG----GAATC-TCT-ACG-AA--AAC---------------------TAACCATCGTGTT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATG-GCGGAAATGAT-AGA-GATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-CG--ATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT-T-CAG--ATTTAA-ATCA--TCTGACATTGACGTT---ATGTACT--GGGGCTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAATATATTT-TTC------TTAC--GAAAC-ATTAATACCATATGAT-ATA-CCCAAATATTC--TACG-ATTTTA-----TTA-C--TTTTTT--A-ATCT-------AA-AATATTCACAA--------TAA---------------TA-------------CAC-GAC--TA-C--T-T------A---T----AAC--------------ACCGA-TCGCCT--CCTGGCGGC-CGGTg
gi|16 : aaa--GGAAC-GTTAATAC-------T-TTA-CCTAGAAAT-C--TACA-TTTCTA-----TTA-AATCATTTT--GTATTT-------AACAACATC--TAA--------TAA--CATATAATCCG--CAC-A---CA--C---AC-G-C--TA-C--GGTAA--A-A---CTTTCAAT-TCG---T-ATA--ACCGA-CAGCCT--CCTGGC
gi|17 : TA-CTTATAAATTC--TACG-TTTTTA-----TTGTG--TGTTTT--T-TTTT------------TATTC--AA--------CA----------TCCG--CAC-A-AACATGC--CACTAACGTTA-C--T-TAA--A-A---C-----------------TA--ACCGA-CCGCCT--CCTGGCGAC-C
gi|18 : tagggacggtttacgtTGGTACG-ATTCGCTAC-------------GTAA--GGAACAAAA--C------TACCCTAACCATTATGTTTa
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGCG-CT-----A-G-AACGAC-CCTGGGTTGA-CCGATGTCTCAGACA
gi|2 : CTCGTAAT--ATAT--TC----------------TGT-C-TCACAAGAGTC-CAGTCAAACATGA-TTTGA-AAAGATAA-CCAGCCAGATTAAAGAGAGTATATATAGCATTGTGG-AC-AT-CTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAAT--ACTAACA-AT--AAGAGACGCACGAAAAGTTATATATAACTATTGTGTTAGAAA-GGAAAGC
gi|2 : -------------GTAAGGAGGAAAAAAGGC------TAAT---G-TATT-TGTTTTGCACTAAGA------TATGTTTTGAAAATATATTT-T-C------TGTA--GAAACTATCAATACCATATGAT-A-A-CTCAAAATTCC--TACGATTTTTA-----TTA-C--TTTTTT-----TTT-------AA-AATCTGAATAAATTTACATTAAT-T------TCCGGTCAC-A-AACA--TAACGC-GAC--TA-CCTT-TTA--A-A---T----GA----AC---------ACCG--TCG-CT--CCTAG-AGC-CGATATCGA-GTT-GGTGAATGAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATG-A--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGT-GTAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG-C-CCTGGG-TGACCCGATTGCTCAGACtcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGTC-GGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACTC-TCAGATCGATCCTAG-TCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACT-CTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGAC-AAATTATCAC-GATTACC-TCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGCA-GATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCAC-ACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACTG-TCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGTA-TTACTATAGAAGGGGGAGGTA-TAATGATGCACT-CCGTGTCA-CTGATCTCACAAAACAAA-GACTGTCACAACCCTACA-TCATGT--CTAAAAGTTCAGTG-CATAGTC-ATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCTC-TAGAT------G-------C--TT-T-AATCA----CCTAGATACGTGT------A--------TA-AAATATGAAAGGGTC-GTAAA--CTTGGAA-TGAAAAACT--ATTGGAGTTATTGCTT-TACGACAGCTGTTCGACAAATA-CTG--------TATACAAAAATACAT--AA-CTCG-AGAACTA------TAAGCGTCATCATTGCATGG----TCAGCTACTTTCGTTTTATTGTCG------CTGGTTGAATAG--GAAACCTCGAAATAGAT----TC--------------CCTGT-C-TCACAAGAATC-CAATTAAAGACGATTTTGA-AAAGTTAA-TCA-------TAAA-AAGATATATA---CA-------A--AT-CTTA-TTC-AA--T--GAC---AATTAGAAT----AAA--ATCT-ACG-AA--AGCAAA-----GAA-----A-ATAGAACTATCGTG-T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACG-ATTCGCTAC-------------GTACGGGGGAAAAAA--CAACCTATATC---ATTACT-TTTTTTGTTT-ATTACTTCTCTATGTTT-GAAAATACGTGT-TTA------TTAA--AAAAC-GTTAATACCTCAT-------------AAATTC--TACG-TTTTTA-----ATA-T--TCTTTTTAG-ATTT-------AA-CATGTTCATAA--------TAA--C------TCCG--CAT-A-AACA-----CAC-GAT--TA-C--T-TAA--A-ACTTT----AATAT--CA-T-ATA--ACCTA-CCGCCT--TCTGGC-GC-CGGT---AAT-TC-TAT-AAT-tgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttg--C--TT-T-AATCT----TCTAGATACGTGCATAAAATCCCGGGCATA-AAATATGCAAGGGTC-GTAAA--ATCGGAA-GGAAA----------------TTGCAC-TACGACAACTGTT-------CAAC------A-AATATACACAAATACATCAAA-GCTCCAGAACTA------TAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTAAATTGAAAAG--GAAATCTCGTTAT--ATAT--TC--------------CCTGT-C-TCACAAGAATT-CAGTTAAACATGATTTTAA-AAATATAG-CCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgTCCAACAAC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TAC-TGT------T--------TA-AA-TATGAAAGA-TC-GTAAA--CTCGGAA-TGAAA----------------TTGCTT-TAC-ACAATTGTT-AA-----AAC------A-AATATACACAAATACAGCAAA-CCCC-AAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTATTGTCG----------TTGAAAAG--GAAATCACATAATTAATATAATC----AAACGAGTAACTCGT-C-TCTCCAGAATC-TAATTAAGCATAATTTTAG-AAATGTAA--CA-------T--A-AAAGTGTAC-------------AC-AT-CTCA-TTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AAACAACAGA-----GAA-----AATTGTAA-TATCATATT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GT-AGA--TGGCT-T-AATCA----TCTA--TACGTGT------T---------G-AAATTTGAAAGA--T-GTAAAAACTCG----CGAA--------TTGAA---ATTGCTT-TACGACAATTGTT-AA------AC------A-AATATACA-AAATACAGCAAA-CCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTATTGTCG----------TTGAAAAGTCGAAATCACATAATTAATATAATCAGACGAG----TAACTCGT-C-TCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAGTGTACA----ATT------C-AT-------TC-CA--T--GAC---AATTAGAAT----AAATT-TCT-ACGAAA--AACAGA-----GAA-----ATATGTAACTATCATGTT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : G-ATTCGCTACATACATAAACAATGTAAGGGGGAGAAAA--CCCT---TGCC---ATTATT-TTTTTTtctttggtttaggattgatgcaaca
gi|8 : atcccgcacttcaaattCTAAT-TGTTTTG----AAAA------TATGTTT-CAAAATACATTT-TTCATTTTTTTAAAAGAAAA-GTCATTACCATAT---------------ATTC--TACG-TTTTTAGGGGGTGG-G--TGTTTT--G-ATTTTATTTTTAA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AAC------------------T--T-TGATAA-A---T----AAT-TCACATT-ATATTACCGA-TCGCCT--CTTGGCGGT-CGGTA--Atttttcatttcttctaattgttttgaaaatatgtttcaaaatacatttttcatttttttaaaagaaaagtcattaccatatattctacgtttttagggggtgggtgttttgattttatttttaacatgtccataataactccgcacaaactttgataaataattcacattatattaccgatcgcctcttggcggtcggtaataatg
gi|9 : atcccgcacttcaaattgattcgctacatacataaacaatgtaagggggagaaaacccttgccattatttttttttttttcatttcttCTAAT-TGTTTTG----AAA-------TATGTTT-CAAAAT-CATTT-TTCATTTT-TTAAAAGAAAA-GTCA-TACCATAT---------------ATTC--TACG-TTTTTAGGGG-TGG-G--TGTTTT--G-ATTTTTTTT--AA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AACT--T--T---GA-----------TAA--A-A---T----AAT-TCACA-T-ATATTACCGA-TCGCCT--CTTGGCGG--TGGTA--Ataatg
blockSeqs : AGCCA GA GTAAGATGC . A . GATACGTGCATAAAATCCCGGGCA C G G . AA . AAACTATTGGAGTTA . G CGACAAATACTG A . C CATGTA CAT GGTC TT TAACAGTAAA T TC TAATATAATCAAACGAGTAAC A . A G A AC GCCAGAT A G ATAGCATTGTGGAC C T CT AGT ATT CTTG TGT A A AC CGCACGAAAAGTT T TA T AGA . T . ATACATAAACAAT CAACCTA CTA A TTTATTACTTCTC T . ATTTTT AA CT GATAATACTTAA . A GGGGG AAT T TAG TATTTTTAAC T ATTTACAT CATATAA GT . . ACACGCTACGGTAAAACTTTCAATTCGTATA . . C TC GTT G G TA C A T T . T . G . TA AA ATATTCT C A T GCCG GGCGAATGGTGTCC T G C TTGG ATTA TTA C C . GA . TA GCG TT TG G GATTT CA C TCGG CCTGTCG G A A TT G T GT T AT G GTA GG C TAATA . TA GTG T G T T C T TCA A A AT . CCA . . C T T AT T GG G A T . TAC CA T . . TCTA . G GCG C CG A T G TTC T A TA T T . . G T TTTTA GC A AT C AA C A GGCCGGTTGAAGA A . T AC G T G C . A T TC . C TA . A T . A G T . . . A T . G G T C C C A . C . G GA . . . C T . T A T AA C G . . G . . A . T . . . . . C . . AAG A C . A A G GT A C T T . C G . A . T . C T
blockSeqs : AAC C GTAGATGG . . . GATACGTGTA . A G . . . TTGAAA . G AAAACA C . C CATGTA TTT . TT CTGG A . TAATATAATCAGACGAGTAAC . . . . G A . A . ACATTG C T C CTG . . TGT . . . GAA T TA A A . . . CCCT . . CACTAAGA . . ATTTT AA C GATATACCCAA . . GGGG TG T GT TTTTTAAC C . TT . . . ACACGATTACTTAAAACTTTAATATCATATA . . C . TTC . . . . A T G . . . . CG AT . . . . . . . . . C . . . . . . C C A GCTAG . . . A G
blockSeqs : A GTAGAC . . . TACGTGTT . A . . . . A . G CAACA C . . . CTA . AT . A . TAAATAATAATAAA . . . . G C . A . AATTC C A C T . . CT . . . GAA A TG A G . . . GGC . . AAAA . . . . C GATAACTCAA . . . T A A AACA T . C . . . ATAACGCGACTACCTTTTAAATGAAC . . C .
blockSeqs : A GC . . . TACTGTT . A . . . . A . . AAACA . . . . CTA . AT . A . AGATTCC . . . . G C . A . ACAA C . C T . . AT . . . GAA T TG A A . . C . . AAAA . . . . C TTTACCTAG . . . C G T AAA G . C . . . ATGCCACTAACGTTACTTAAAACTA . . C .
blockSeqs : . . . GCGTT . . ATATTCC . . . . T T . A . AC . . . T . . TT . . . GAA . G A A . . AAA . . . . A . . . . C T G AAA T . C . . . TTTGATAAATAATTCACATTATATT . . C .
blockSeqs : ATATTC . . . . T C . . . AC . . . T . . A . . . . . . A . . . . . . . A . . . . T C G AAC C . C . . . TTTGATAAAATAATTCACATATATT . . T
blockSeqs : . T . . . . . . . . . . . G G . A C . . . . . CACGACTACTTATAAC . . .
blockSeqs : . . . G G . . . . . . . . AAAACATGAATA . .
blockSeqCons : A* GTAGAC*********** **** GATACGTGTT************** GA*************** AAACA************** CTN NT CG******** TAATATAATCATAAC********** ACATT*********** C* GAA********** A** CC******* TACTTAA****** ** C******** ** C*
originalCons : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TACGTGT------T--------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAAA--T--ATTGGAGTTATTGCTT-TACGACAACTGTT-AACAAACAACTG----A-AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCATTTGTATTATTGTCG-----GTTGATTGAAAAG--GAAATCTCGTAATTAATATAATC----GA-----TAACTCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT---G-AC-AT-CTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTGTT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAA--C------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATGAT-ATA-CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
finalCons : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTA-TAAATGTAGAC-----------TT-T-AATCA----TCTAGATACGTGTT--------------TA-AAATATGAAAGGGTC-GTAAA--CTCGGAA-TGAAGA---------------TTGCTT-TACGACAACTGTTAAACA--------------AATATACANAAATACATCAAA-CCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCNTTTGTATTATTGTCGCG--------TTGAAAAG--GAAATCTCGTAATTAATATAATCATAAC----------TCGT-C-TCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACACATT-----------ATC-TTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGAGAA----------ATATGTAACTATCGTGTTA--AA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTAAGGGGGAAAAAACC-------TACC---GCTATT-TGTTTTG----AAAA------TATGTTT-GAAAATACATTT-TTC------TTAA--GAAAC-GTCAATACCATATTACTTAA------AAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-ATTT-------AA-AATGTCCATAA--------TAAC--------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TAA--A-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 1 33333333333333333 1111 444444444444444444444444 1 11 888888888888888888888888888888888 111 22222 4444444444444 1 333333 1111 555555555 11 11 777777777777777777777 1 1111111 55555555555555555555 111 111 11111 111 1111111111111 444444444444444444444444444444 1111 222222222222222222 5555555555555555555555555555555555555555 22222222222222 5555555555555555 22222 1111 222222222222 111111111 11111111 222222222 00000000000000000000000000000000000000000000000000000000 11111 1 1 11 1 11 222 11 11 3333333 2222 55555555555555 1 1 2222 2222 222 1 222 11 1 11 3333 11 11 1 33333 11 1 1111 2222222 1 22 11 1 11 1 11 222 11 11111 1 222 1 222 1 1 222 11 1 1 1 11 11 1 1 111 11 1 1 333333 1 1 222 11 222 222 1 1 11 1 1 22222 11 11 11 6666666666666 1 22 1 1 1 1 1111 222 1 1 1 1 222 1 1 1 1 1 11 1 11 1 11 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 11 222 1 11 1 1 1 1 11 1 1 11 1 1 1 1 11 2222 2222
lowQualScore : 99999 6 22222222222222222 6 6 4444 777777777777777777777777 6 1 0 8 11 8 222222222222222222222222222222222 8 3 0 444 8 00000 8 3333333333333 0 777777 888 7777 0 3 333333333 11 11 000000000000000000000 0 1 5 5 1 66 6666666 6 5 22222222222222222222 0 8 111 88888 000 22222 555 5 5 77 8888888888888 5 11 1 5 888 5 1 8 777777777777777777777777777777 4444 777777777777777777 5 7777777777777777777777777777777777777777 5 5 44444444444444 66 77 0 0 8888888888888888 66 4 00000 1111 1 888888888888 555555555 0 2 66666666 555555555 66 4 4 44444444444444444444444444444444444444444444444444444444 4 66 55 99 99999 3 3 88 1 5 1 1 88 1 111 1 88 88 22 3333333 1 1 1 2222 00000000000000 5 5 1 3333 5555 111 1 5 000 88 3 88 4444 44 88 3 33333 88 3 9999 8888888 6 2 00 88 3 7 88 3 88 1 333 88 6 99999 5 22 000 1 1 5 1 2 1 111 1 5 22 5 000 88 5 5 1 5 88 1 77 1 5 1 5 999 88 1 5 5 000000 5 5 000 1 77 1 1 1 111 111 1 22 5 1 5 77 5 5 77777 77 7 0 88 6 44 6 7 1111111111111 7 3 7 00 6 5 5 1 5 1 1 22 5 1 9999 111 1 5 5 5 1 5 000 5 5 5 5 5 1 66 1 2 5 1 2 88 1 5 1 88 5 5 5 5 1 5 1 5 1 88 5 1 5 5 5 5 5 5 77 1 5 5 5 5 5 5 5 88 111 5 66 5 5 5 5 88 5 5 66 5 5 1 5 5 66 3333 1 4444 1 1
lowQualScore : ..... . ................. . . .... ........................ . . . . .. . ................................. . . . ... . ..... . ............. . ...... ... .... . . ......... .. .. ..................... . . . . . .. ....... . . .................... . . ... ..... ... ..... ... . . .. ............. . .. . . ... . . . .............................. .... .................. . ........................................ . . .............. .. .. . . ................ .. . ..... .... . ............ ......... . . ........ ......... .. . . ........................................................ . .. .. .. ..... . . .. . . . . .. . ... . .. .. .. ....... . . . .... .............. . . . .... .... ... . . ... .. . .. .... .. .. . ..... .. . .... ....... . . .. .. . . .. . .. . ... .. . ..... . .. ... . . . . . . ... . . .. . ... .. . . . . .. . .. . . . . ... .. . . . ...... . . ... . .. . . . ... ... . .. . . . .. . . ..... .. . . .. . .. . . ............. . . . .. . . . . . . . .. . . .... ... . . . . . . ... . . . . . . .. . . . . . .. . . . .. . . . . . . . . . .. . . . . . . . . .. . . . . . . . . .. ... . .. . . . . .. . . .. . . . . . .. .... . .... . .
lowQualScore : 33333 0 11111111111111111 7 7 2222 777777777777777777777777 7 7 0 0 00 0 222222222222222222222222222222222 0 2 6 000 0 00000 8 6666666666666 0 000000 000 0000 8 8 222222222 00 00 777777777777777777777 4 4 7 0 4 44 2222222 5 0 77777777777777777777 7 7 444 99999 000 33333 444 7 7 99 1111111111111 1 99 7 7 000 7 0 0 222222222222222222222222222222 2222 222222222222222222 0 5555555555555555555555555555555555555555 7 7 00000000000000 99 55 4 4 7777777777777777 11 4 66666 6666 0 999999999999 444444444 9 7 11111111 222222222 11 4 4 00000000000000000000000000000000000000000000000000000000 4 11 22 22 77777 3 3 55 0 5 0 0 00 0 000 0 55 55 00 0000000 0 0 0 5555 00000000000000 5 0 0 5555 0000 555 0 0 555 00 3 33 7777 77 77 3 33333 33 3 0000 7777777 7 0 77 33 3 3 33 3 33 0 333 33 7 33333 0 00 555 0 0 5 0 5 0 000 0 5 00 5 555 55 0 0 0 5 55 0 55 0 5 0 5 555 00 0 0 0 000000 5 0 000 0 55 0 0 0 000 555 0 00 5 0 0 55 0 5 55555 55 3 7 33 7 33 7 3 7777777777777 3 3 3 77 7 5 0 0 5 0 0 00 5 0 0000 000 0 5 0 5 0 5 555 0 0 5 5 5 0 00 0 5 0 0 5 00 0 0 0 00 0 0 0 0 0 5 0 5 0 55 0 0 0 5 0 0 0 5 55 0 5 5 5 5 5 0 5 55 000 5 00 0 5 5 0 00 5 0 55 5 5 0 0 5 55 5555 0 0000 0 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCTGATAAAT------GT-AGA--C--TT-T-AATCA----TCTAG-TACGTGT-T-------------TA-AAATATGAAAGGGTC-GTAAA--CTCG-GAA------------TGAAA--A-------------TTGCTT-TACGACAACTGTTAA---A-CAAATA-----TACANAAATACAT-------C----AAACCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCNTTTGTATTATTGTCGC--------GTTGA--AAAG--GAAATCTCGTAATTAATATAATCA------TAACTCGT-CTCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT------G------TCTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTG-TT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTA------------AGGGGGA----AAAAAN---C--TAC--C---GCTATT-TGTTT------------------------TG----AAAA------TATGTTT-GAAAATACATTT-TTC-----TT-------AA--GAAAC-GTCAATACCATATGA---T-A---CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-A-------TTT-----AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TA--AA-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
Reference ( family-276 ) : NNNNNNNNNNNNNNNNNNNNNNNNTCCAACAGC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTAGATACGTGT-T-------------TA-AAATATGAAAGGGTC-GTAAA--CTCG-GAA------------TGAAG--A-------------TTGCTT-TACGACAACTGTTAA---A-CAAATA-----TACANAAATACAT-------C----AAACCCCCAAAACTACATGTATAAGCGTCTTCTNTGTATGG----TCAGCTGCNTTTGTATTATTGTCGC--------GTTGA--AAAG--GAAATCTCGTAATTAATATAATCA------TAACTCGT-CTCACAAGAATC-CAGTTAAACATGATTTTGA-AAAGATAA-CCA-------TAAA-AAAGTATACA---CATT------A------TCTTATTTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AA--AACAGA-----GAA-----ATATGTAACTATCGTG-TT--AAA-GAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTNTAGCACG-ATTCGCTAC-------------GTA------------AGGGGGA----AAAAAC---C--TAC--C---GCTATT-TGTTT------------------------TG----AAAA------TATGTTT-GAAAATACATTT-TTC-----TT-------AA--GAAAC-GTCAATACCATAT-----T-A---CTTAAAAATTC--TACG-TTTTTA-----TTA-N--TNTTTT--G-A-------TTT-----AA-AATGTCCATAA--------TAA--C------TCCG--CAC-A-AACA--C--CAC-GAC--TA-C--T-TA--AA-A---T----AAT-TCGCA-T-ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--AATGTT-TAT-AAT-AACTTATACTTNCACGCGAAGAANAGNGACCCGCNACGTGCCCATAANGCATTTACATAATTTAAAANNCTACAATATTCTCATATCTATNCTTACAGAAANGGNCCACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTCCGCGTGNTATGTTTGGGGGCTATTAGTCTTAGGGAGATAGGGACACCNACAGGAAGTGACCGTCAGAGAGAAGGACGT-GGGGAC--ATG-A-GGAAATGATTAGACGATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-CGGGATG---AT--GAGTGGTAGGTTTATA-GG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACAGGGACNTT---ATGTACT--GGGGCTGTCATTACAAACTAATACTGGATATCCCGACNNCTCTCGTGANTCCNCGTTGTCNTAATGCGNTCTCAAGNCACAAACGTNNATCCTAAATGGCCCAAGTTACGCGACACACCGCCCTGNGGTATTTGTCAGATATTGNCAGGGCCTNTAACCCCAATANCAAGATTANCATTCCATCAGNGCATCTGTCGTCTCTATCTAACCTCAATGGACAGGAGTGCGTATATCTCNAGGTTTACGACGTNTCCAANCAACAGNTCGTTCGTCGATATCAGTAATNGATGCTGACCGTCATGCGANNTATATTTCTCATTNGTCCTTGTGCTGCTGTGTATCTTAGCTTTTACTTATGCACCATCGAAATTGA--TTTCGCTT-NTTTGCTTTGCCAGCATACATTGGCCTGCGGCT-----AAG-CACGAC-CCTGGGTTGA-CCGATGTCTCAGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCNCAGAATTTACTGANCTGTTTCTGGGCGTGTTTCAAGTNTCTCATNNAACTGCGTTNATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCNTAAACAAAGTTGTCCGGTCATGCCCGTACATCTCTACTGGAACAGCTTNATGTGTACTACAGAATGGGCGTGTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATCGATCCTAGGTCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGNATATAGATACNTGTTGTCAGANACGAAATATTTCGACTCTNCTTTCGAGAGGAAGAACTCACTGACTNTTTTCTGNTGCTGATGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATACCAAACATTAACATTACNGTATGCTACAGCAAGANGTTCTCACTCAGACAGCCTNTCTTATGATGAACAATGCTTCATNCTGCACCACATAGACAAGTGTACACATTATGACAAACAAGTGTGTAACATGCTCGCAACTGGTCAGCGAGAGTGGGTAGTGGCTGTCCCATNCCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCGATCTCACAAAACAAAAGACTGTCACAACCCTACAATCATGTATCTGAAAGTTCAGTGGNATAGTCCATAGCTACAGTGAAGTTGTAGGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAGGTTANAACACTGATCTCCACTTCATTGAAGAATTAAGTTCTAGAANAAGAAGTGAGTAAACAAAATGGTAGTNACTATGCGANTTTGTAACATTATCTCANCNTTTGTGCT
gi|1 : TCCAAC--C--AGTCTTTGATAAATTTCACTGT-A-A--T--TTAT-AATCAATAATTTAG-----TAA-T-------------TA-TAACATAGAAGGGTCCGTAAA--CTCG-GAAATGAAAATTTATTGGAGTTA-------------TTGCCTGTACAACAACTGTCAACAAA-CAACTG-----TTCAACAATACATAAAAATGCGTCAAAACCTCCAAAAC------TATAAACGCCTT---TGTATGG----TCAGC--------TATAAATTTCG---------GTTGATGAATA--GGAATCTCGTAAT-------ATCG----------TCGTCCTCA-AAGAATT-CAGTCAAACATGATTTGAA-AAAGATAA-CCA-------TTAA-AAACTATATC---CATT------GTACCATTCTTATTTC-CA--T--GAC---AATAAGAAT-----TATTG-CT-ACA-AA--ATCAGA------AA-----ATATAT--CTA--GTGTTT--AAACGAAAAACAAATCGCACAAACCATTTTTTTTCCGATGAATGCCAATCACGCAACAAGATAACTGCGCGTTCAAACTTTGGTTTACTCATAATCGAGACTGGTGTGTAGCACGAATTCGCTAC-------------GTA------------A-GGGGA----AAAAAG---C--AAC--T---GCTATT-TGTTT------------------------TG----AAAA------TATTTTT-GAAAATATATTTCTTC-----TT-------TA--AGAAC-GTCAATATAATATAA---T-ATATTTTAAAAAGTCTATACG-ATTTTA-----TTA-C--TGTTTT--A-A-------TCT-----AA-ACTGTTCATAA--------CAAATT------TCCG--CACTACAACA--C--CAC-AAC--TAGC--T-TA--AA-ATT-T----AAT-ACGCA-TAATA--ACTGGCCCGCTTCGCCTGGCGGTGGGGTA--AATATTATAT-AAT-AATT--TACTTGT-CACAAAGAAAAGGGACCCGCAACGTGCCCATAATACATTTACATAATT--AAACCCTACA-------TATATCTATACTTACAGAAATGGATCACATT-C--CCGTG--------------TGTCGGAAG-CCGC-TAATATGT----GGGCT-T--GTC---GGGAGATAGGGACACCGA-AAAAAGTGACCGTCAGAGAGAAG--CGTGGGGGAC--ATGAA-AGGAATAA-TAGAC-ACACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAA-AAAGATG---AT--GAGTGGTAAGTTTATATGG--GAGGGGT-TTCAG--GTTTAA-ATCA--TCTGACTGGGACTTT---ATGCGCT--GGAGCTGTCATTACAAAC-----CTGGATATCCCGACATCTCTC---AGTCCTCG-TGTCATAATGAAGTC---AACCAC-AACGTTAATCCTAAATGGC---AGTTACGCGACACACCG-CCTGGGATA-TTGTCAG--ATTGGCA--GCTTCTAACCCC-ATAGCAAGAT--GCATTC--TCAGAGCATCTGTCGTTTCTA---AACCTCAATGGACA-GAGT-C-TATATCTCAAGGTTTA--ACGTTTCCAAACAACAACTCG---GTCGATATCAGTAATCGATGCTAACCGTCATGCGAATTATATTTCTCA-TGGTCCTTGTGCTACTGT-TA-CTTAAT-----CTTAT--ACCATTGAAATTGA--TTACGCTT-TTTTGCTTTGCCAG-AT-CATTGGCCTGC-ATT-----AA--CACGACTCCTGGGTTG--CC-ATGTCTCAGACA
gi|1 : gtaatagcaatgttatttctatatTGTTCTGGAT-ATACAGGCGGGGTGTATCAGATG-TGCCCCGCAGAATTTACTGATCTGTTTCTGGGCGTGTTTCAAGTATCTCATGGAATTGCGTTAATCGTGGGTGGTGTTCCCGAACTTTTTTTTCATACCACAGAACAATATGTTCCTAAACAAAG-TGTCCGGTCATGCTCGTACATCTCTACTGG-ACAGCTTCATGTGTACTACAGAATGGGCG-GTCCTGTCCCTTGCTACACAGTCCAACTCCTCAGATTGATCCTAGGTCCCAGCCCTCAGT-GTCCGTCCTTTG-TTTACACTTCTGCTGAAGGACATTATAACGCTGTCGTGCATATAGATACTTGTTGTCAGAAACGAAATATTTGGA-TCTGTTTTCAAGAGGAAGAACTCACTGACTGTTTTCTGCTGTT--TGAAATCAATAGACCAAATTATCACCGATTACCCTCTCTCACCATA-CAAACATTAACATTACAGTATGCTACAGCAAGAGGTTCTCACTC-GACAGCTTATCTTATGATG--CAATG-TTTATTCTGCACCACATAGACAAGTGTACACATTATAACAAACAA-TGTGTAACATGCTCGCAACTGGTCAGCAAG-GTGGGTAGTGGCTGTCCCATATCCTGTATCTAGCTCTGTAATTACTATAGAAGGGGGAGGTAATAATGACGCGCTTCCGTGTCAACCAATCTCACAAAACAAAAGACTGTCACAA-CCTACAATCATGTATTTGA---TTC-GTGGAATAGTCCATAGTT-TAGTG-AGTT-TAGGCA--TTGTCTCTGTCTAG-AAAATGAAAACAGCCTGGACAAA-AATGTCAGGTTAGAACATTGA-CTCCACTTCATTGAAGAATTAAGTTCTAGAAAAAGAAGT-AGTAAACAAAATAGTAGTTACTATGCAAGTTTGTAACATTATTTCAGCATTTGTGCTtacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaatgttctggatatacaggcggggtgtatcagatgtgccccgcagaatttactgatctgtttctgggcgtgtttcaagtatctcatggaattgcgttaatcgtgggtggtgttcccgaacttttttttcataccacagaacaatatgttcctaaacaaagtgtccggtcatgctcgtacatctctactggacagcttcatgtgtactacagaatgggcggtcctgtcccttgctacacagtccaactcctcagattgatcctaggtcccagccctcagtgtccgtcctttgtttacacttctgctgaaggacattataacgctgtcgtgcatatagatacttgttgtcagaaacgaaatatttggatctgttttcaagaggaagaactcactgactgttttctgctgtttgaaatcaatagaccaaattatcaccgattaccctctctcaccatacaaacattaacattacagtatgctacagcaagaggttctcactcgacagcttatcttatgatgcaatgtttattctgcaccacatagacaagtgtacacattataacaaacaatgtgtaacatgctcgcaactggtcagcaaggtgggtagtggctgtcccatatcctgtatctagctctgtaattactatagaagggggaggtaataatgacgcgcttccgtgtcaaccaatctcacaaaacaaaagactgtcacaacctacaatcatgtatttgattcgtggaatagtccatagtttagtgagtttaggcattgtctctgtctagaaaatgaaaacagcctggacaaaaatgtcaggttagaacattgactccacttcattgaagaattaagttctagaaaaagaagtagtaaacaaaatagtagttactatgcaagtttgtaacattatttcagcatttgtgcttgagtgaa
gi|10 : gtaatagcaatgttatttctatattccaaccagtctttgataaatttcactgtaatttataatcaataatttagtaattataacatagaagggtccgtaaactcggaaatgaaaatttattggagttattgcctgtacaacaactgtcaacaaacaactgttcaacaatacataaaaatgcgtcaaaacctccaaaactataaacgcctttgtatggtcagctataaatttcggttgatgaataggaatctcgtaatatcgtcgtcctcaaagaattcagtcaaacatgatttgaaaaagataaccattaaaaactatatccattgtaccattcttatttccatgacaataagaattattgctacaaaatcagaaaatatatctagtgtttaaacgaaaaacaaatcgcacaaaccattttttttccgatgaatgccaatcacgcaacaagataactgcgcgttcaaactttggtttactcataatcgagactggtgtgtagcacgaattcgctacgtaaggggaaaaaagcaactgctatttgttttgaaaatatttttgaaaatatatttcttctttaagaacgtcaatataatataatatattttaaaaagtctatacgattttattactgttttaatctaaactgttcataacaaatttccgcactacaacaccacaactagcttaaaatttaatacgcataataactggcccgcttcgcctggcggtggggtaaatattatataataatttacttgtcacaaagaaaagggacccgcaacgtgcccataatacatttacataattaaaccctacatatatctatacttacagaaatggatcacattcccgtgtgtcggaagccgctaatatgtgggcttgtcgggagatagggacaccgaaaaaagtgaccgtcagagagaagcgtgggggacatgaaaggaataatagacacacctcgacagatatacagaggaatgagaaaaagatgatgagtggtaagtttatatgggaggggtttcaggtttaaatcatctgactgggactttatgcgctggagctgtcattacaaacctggatatcccgacatctctcagtcctcgtgtcataatgaagtcaaccacaacgttaatcctaaatggcagttacgcgacacaccgcctgggatattgtcagattggcagcttctaaccccatagcaagatgcattctcagagcatctgtcgtttctaaacctcaatggacagagtctatatctcaaggtttaacgtttccaaacaacaactcggtcgatatcagtaatcgatgctaaccgtcatgcgaattatatttctcatggtccttgtgctactgttacttaatcttataccattgaaattgattacgcttttttgctttgccagatcattggcctgcattaacacgactcctgggttgccatgtctcagacatacgtggccgtcagtatggtccttaccgatatcataagacaaggttgtcactgtatgcctataggaagcaaaatgatctccaatgaaaacgaattagaatggagatgtcgtttctctctagctgaaagaaaacttgtttgcgccaatgaatcacacccattttatgtagcggacttctgaaaaatatttctaaaggagggtcatcccaatcacaattagaagaaaccattactgtgctcgattttccatgaaaactaacaaAGCTCTGATAAAT------GTAAGATGC--TT-TAAATCA----TCTG-----GCGT-T-------------TACAAGTATtgagtgaa
gi|11 : acaacttccacgcaaacggtaaaacttgaaaactggtgtgtttcttttaacaaaaatcttgtggatttgaaatgaacaatattgaaggcctgtgtggttacaaagctagcttataatgcggataaattgatgtagcccATTAA-ATAATAA------TAAATAGTACTCACAATAATC-CAATTAAACATGATTTTGA-AAGAATAA-ACA-------TAAA-AAAGTAT-TA---CATT------G--------TTATT---CAAGT--GAC---AATT-GAAT----AAATTGTCT-ACG-AA--AAAAGA-----GAA-----ATA-GTTACTGTCGTG-TT--AAA-acaaattgcacaaacacaatataca
gi|12 : tatCTATT-TGTTT------------------------TG----AAAA------TATGGTT-GAAATTATATTT-TTG-----TT-------AA--GAAA----CAATGCCATATGATAAT-A---CTTAAAAATTC--TACG-TGTTTG-----TTA-T--TTTCT-------------TTT-----A--------CATAG--------TAA--C------TCCG--TAC-A-AGCA-----------------------A--AACA---T----GA----------ATA--ACCGA-CCGCCT--CCTGGCGGC-CGGTA--Aatatgcaagtctttgtatagtgattgctgaagca
gi|13 : ttattTAAATATGGTTCTGT-AAAGATAA-CCA-------T--A-AAAGTATACA---C---------G------TCTTATTT--CA--T--AAC---AATTAGAAG----GAATC-TCT-ACG-AA--AAC---------------------TAACCATCGTG-TT--GAA-TAAAt
gi|14 : aatatcacaagtgtgattaaatgagtaccataatcacattaccgT-GGGGAC--ATG-GCGGAAATGAT-AGA-GATACCT-CGACAG-----ATAT--ACAGAGGAAT-GAGAG-CG--ATG---AT--AAGTGGTAG--TTATA-GG--GAGGGGT-T-CAG--ATTTAA-ATCA--TCTGACATTGACGTT---ATGTACT--GGGGCTGTCATTACAAACTttctttgttttacatg
gi|15 : ggaagcT-GAAAATATATTT-TTC-----TT-------AC--GAAAC-ATTAATACCATATGATA-T-A---CCCAAATATTC--TACG-ATTTTA-----TTA-C--TTTTTT--A-A-------TCT-----AA-AATATTCACAA--------TAA---------------TA-------------CAC-GAC--TA-C--T-T------A---T----AAC--------------ACCGA-TCGCCT--CCTGGCGGC-CGGTg
gi|16 : aaa--GGAAC-GTTAATACT---T-----T-A---CCTAGAAAT-C--TACA-TTTCTA-----TTA-AATCATTTT--GTA-------TTT-----AACAACATC--TAA--------TAA--CATATAATCCG--CAC-A---CA--C---AC-G-C--TA-C--GGTA--AA-A---CTTTCAAT-TCG---T-ATA--ACCGA-CAGCCT--CCTGGC
gi|17 : T-----T-A---CTTATAAATTC--TACG-TTTTTA-----TTGTG--TGTTTT--T-T-------TTT----------TATTC--AA--------CA----------TCCG--CAC-A-AACATGC--CACTAACGTTA-C--T-TA--AA-A---C-----------------TA--ACCGA-CCGCCT--CCTGGCGAC-C
gi|18 : tagggacggtttacgTGGTACG-ATTCGCTAC-------------GTA------------A---GGA----ACAAAA---C--TAC--CCTAACCATTATGTTT------------------------a
gi|19 : atcgtgttaagaaaatctttgttttagatgatgccaaacttcaacacgataaccccgcacCCATTGAAATGGA--TTTCG-TT-CTTTGCTTTGCCAGCATACATTGGCCAGCG-CT-----A-G-AACGAC-CCTGGGTTGA-CCGATGTCTCAGACA
gi|2 : CTCGTAAT--ATAT--TC------------TGT-CTCACAAGAGTC-CAGTCAAACATGA-TTTGA-AAAGATAA-CCAGCCAGATTAAAGAGAGTATATATAGCATTGTGGACA------TCTTAATTCTCA--CTGGACATTAATTAGAATCTTGAAAT--ACTAACA-AT--AAGAGACGCACGAAAAGTTATATATAACTATTGTG-TTAGAAA-GGAAAGC
gi|2 : -------------GTA------------AGGAGGA----AAAAAGG--C--TAA--T---G-TATT-TGTTT------------------------TGCACTAAGA------TATGTTTTGAAAATATATTT-T-C-----TG-------TA--GAAACTATCAATACCATATGA---TAA---CTCAAAATTCC--TACGATTTTTA-----TTA-C--TTTTTT------------TTT-----AA-AATCTGAATAAATTTACATTAAT-T------TCCGGTCAC-A-AACA--TAACGC-GAC--TA-CCTT-TT--AA-A---T----GA----AC---------ACCG--TCG-CT--CCTAG-AGC-CGATATCGA-GTT-GGTGAATGAACTTATACTTCCACGCGAAGAATAGTA--CTGCTACGTGTC---AAGGTATT--CATAATTTAAAAAACTACAATATTCTCATATCTATCCTTACAGAAAAGGTCTACATTGCCGCCGTGGGCGAATGGTGTCCTGTCGGAGGTTCGCGTGCTATGTTTGGGAGCTATTAGTCTTAGGGAGATAGGAACACCCACAGGAAGTGACCGTCA---AGAAGGACGT-TAGGACTAATG-A--GAAATGATTAGGTGATACTTGCTGCAGGATTTATATCAATAGACGCATCGAGCATCGGGATGCCTGTCGGAGT-GTAGATTTAT--GGTTGAGTAGTGTTCAGGTGTTTAATATCAATTCTGACAGGGAACTTGTAATGTACTGGGGGGCTGCTACTG-AAATTAATACTGAATAT-CTGACTACTCTCGTGATTTCGCGTTGTTTTAATGCGTTCTCAAGACACAAACGTATATCCT-AATGGTCCAAGT--CG-GACACACCGCCCTGTAGTATTTGTCAGATATTGTCAGGGCCTGTAACCCTAATATC-AGATTACCATTTCATCAGTG-AT-TGTCGTCTTTATCTA--CTCAATGG-CAGGAGTGCGTATATCTCCAGATTTACGATATATCCAATCAACAGGTTGTTCGTCGATATCA-T-ATAGATGCTGACCGTCATGTGATATATATTTCTCATTTGT-CTTGT--TGCTGTGTATCTTAGCTTTTACTTATGCACC--CGAATCTGGATTTTCGCTTAATTTGGTTTGCCAGCATACATTGGACTGTGGCCGGTTGAAGACACG-C-CCTGGG-TGACCCGATTGCTCAGACtcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctgtaaggaggaaaaaaggctaatgtatttgttttgcactaagatatgttttgaaaatatattttctgtagaaactatcaataccatatgataactcaaaattcctacgatttttattactttttttttaaaatctgaataaatttacattaatttccggtcacaaacataacgcgactaccttttaaatgaacaccgtcgctcctagagccgatatcgagttggtgaatgaacttatacttccacgcgaagaatagtactgctacgtgtcaaggtattcataatttaaaaaactacaatattctcatatctatccttacagaaaaggtctacattgccgccgtgggcgaatggtgtcctgtcggaggttcgcgtgctatgtttgggagctattagtcttagggagataggaacacccacaggaagtgaccgtcaagaaggacgttaggactaatgagaaatgattaggtgatacttgctgcaggatttatatcaatagacgcatcgagcatcgggatgcctgtcggagtgtagatttatggttgagtagtgttcaggtgtttaatatcaattctgacagggaacttgtaatgtactggggggctgctactgaaattaatactgaatatctgactactctcgtgatttcgcgttgttttaatgcgttctcaagacacaaacgtatatcctaatggtccaagtcggacacaccgccctgtagtatttgtcagatattgtcagggcctgtaaccctaatatcagattaccatttcatcagtgattgtcgtctttatctactcaatggcaggagtgcgtatatctccagatttacgatatatccaatcaacaggttgttcgtcgatatcatatagatgctgaccgtcatgtgatatatatttctcatttgtcttgttgctgtgtatcttagcttttacttatgcacccgaatctggattttcgcttaatttggtttgccagcatacattggactgtggccggttgaagacacgccctgggtgacccgattgctcagactt
gi|3 : ctcgtaatatattctgtctcacaagagtccagtcaaacatgatttgaaaagataaccagccagattaaagagagtatatatagcattgtggacatcttaattctcactggacattaattagaatcttgaaatactaacaataagagacgcacgaaaagttatatataactattgtgttagaaaggaaagctcttgtttttagacttatgcaaatcacaaacattgattattccgctatacttcaatatgagtggctTGTTCTGGATTATACAGGCGGGGTGTATCAGATGGTGCCCCCCAGA-TTTACTGAACTGTTTCTGGGCGTGTTTCAAGTTTCTCATTCA-CTGTGTTCATCGTGG-TA-TGTTCCCGAA---TTTTTTCATACCACAGAACAATATGTTCATAAACAAAGTTGTC-GGTCATGCCCGTACATCTTTACTGGAACAGCTTGATGTGTACTACAGAATGGGCGTGTCTTGTC---TGCTACACAGTCCAACTC-TCAGATCGATCCTAG-TCCCAGCCCTCAGTAGTCCGTCCTTTGTTTTACACT-CTGCTGAAGGACATTATAACGCTGTCGTGGATATAGATA-GTGTTGTCAGATATGAAATATTTCAACTCTCCTTTAGAGAGAAAGAACTCACT--CTCTTTT-TGGTGCTGATGAAATCAATAGAC-AAATTATCAC-GATTACC-TCTCTCACCATACCAAACATTAACATTACTGTATGCTACAGCA-GATGTTCTCACTCAGACAGCCTTTCTTATGATGAACAATGCTTCATGCTGCAC-ACATAGACAAGTGTACACATTA-GACAAACAAGTGTGTAACATGCT-GCAACTG-TCAGCGAGAGTGGGTAGTG--TGTCCCATTCCCTGTATCTAGCTCTGTA-TTACTATAGAAGGGGGAGGTA-TAATGATGCACT-CCGTGTCA-CTGATCTCACAAAACAAA-GACTGTCACAACCCTACA-TCATGT--CTAAAAGTTCAGTG-CATAGTC-ATAGCTACAATGAAGTTGTAAGCAGTCTGTCTCTGTCTAGAAAAATGAAAACAGCCTGGGCAGACGACGTCAAGTTAT-ACACTGATCTCCACTTCATTGAAGAATT-AGTTTTAGAACAAAAAGTGAGTAAACAAAATGG-AG-AACT----GATTTTAT----TTATCTCACCTTTTGTGCTtt
gi|4 : ACAGCCAAAGCTCT-CTAGAT------G-------C--TT-T-AATCA----CCTAGATACGTGT-A-------------TA-AAATATGAAAGGGTC-GTAAA--CTTG-GAA------------TGAAA--AACTATTGGAGTTATTGCTT-TACGACAGCTGTTCG---A-CAAATACTGTATACAAAAATACAT-------------AACTCG-AGAACTA------TAAGCGTCATCATTGCATGG----TCAGCTACTTTCGTTTTATTGTCGCTG------GTTGA--ATAG--GAAACCTCGAAATAGAT----TC----------CCTGT-CTCACAAGAATC-CAATTAAAGACGATTTTGA-AAAGTTAA-TCA-------TAAA-AAGATATATA---CA-A------A------TCTTA-TTC-AA--T--GAC---AATTAGAAT----AAA--ATCT-ACG-AA--AGCAAA-----GAA-----A-ATAGAACTATCGTG--T--AAA-GAAAAg
gi|4 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgGTTTAGCACG-ATTCGCTAC-------------GTA------------CGGGGGA----AAAAACAACC--TATATC---ATTACT-TTTTT------------------------TGTTT-ATTACTTCTCTATGTTT-GAAAATACGTGT-TTA-----TT-------AA--AAAAC-GTTAATACCTCAT----------------AAATTC--TACG-TTTTTA-----ATA-T--TCTTTTTAG-A-------TTT-----AA-CATGTTCATAA--------TAA--C------TCCG--CAT-A-AACA-----CAC-GAT--TA-C--T-TA--AA-ACTTT----AATAT--CA-T-ATA--ACCTA-CCGCCT--TCTGGC-GC-CGGT---AAT-TC-TAT-AAT-tgacgccaaacaccaacataacaatccctcacttagaattttggtttagcacgattcgctacgtacgggggaaaaaacaacctatatcattactttttttgtttattacttctctatgtttgaaaatacgtgtttattaaaaaacgttaatacctcataaattctacgtttttaatattctttttagatttaacatgttcataataactccgcataaacacacgattacttaaaactttaatatcatataacctaccgccttctggcgccggtaattctataatgca
gi|5 : aatgtccaaaaagcatatgtacgttttactttgtcaaaactaagtagttttaggggacttcactagactgaaaggcatcgtgcgattacaaaaaaaaaaaaatctctcacagacatgtggacacagtgatgacagccaaagctctctagatgctttaatcacctagatacgtgtataaaatatgaaagggtcgtaaacttggaatgaaaaactattggagttattgctttacgacagctgttcgacaaatactgtatacaaaaatacataactcgagaactataagcgtcatcattgcatggtcagctactttcgttttattgtcgctggttgaataggaaacctcgaaatagattccctgtctcacaagaatccaattaaagacgattttgaaaagttaatcataaaaagatatatacaaatcttattcaatgacaattagaataaaatctacgaaagcaaagaaaatagaactatcgtgtaaagaaaatgacgccaaacaccaacataacaatccctcacttagaattttg--C--TT-T-AATCT----TCTAGATACGTGCATAAAATCCCGGGCATA-AAATATGCAAGGGTC-GTAAA--ATCG-GAA------------GGAA---A-------------TTGCAC-TACGACAACTGTTCA---A-CAAATA-----TACACAAATACAT-------C----AAAGCTCCAGAAC------TATAGGCGTCTATTTTGTATGG----TCAGCTGCTTTTGTATTATTGTCGTAACAGTAAATTGA--AAAG--GAAATCTCGT--T--ATATATTC----------CCTGT-CTCACAAGAATT-CAGTTAAACATGATTTTAA-AAATATAG-CCA-------TAAA-AAAGTGTACA---CATgca
gi|6 : aagaaacaaattgacgcaagcgtcagaaaccagccacaaacaatttgtttccgttaacaaaatatgtgaattttgaattgaacaagatgaaaggcattgtgtgattacaaggaaaattctctcacactcggacctgtggacaaagcgatgttagcccaagctgatgTCCAACAAC--AAGCTCT-ATAAAT------GT-AGA--C--TT-T-AATCA----TCTA--TAC-TGT-T-------------TA-AA-TATGAAAGA-TC-GTAAA--CTCG-GAA------------TGAA---A-------------TTGCTT-TAC-ACAATTGTTAA---AACAAATA-----TACACAAATACAG-------C----AAACCCC-AAAACTACATGTATAAGCGTCTTCTATGTATGG----TCATCTGCATTTGTATTATTGT--C--------GTTGA--AAAG--GAAATCACATAATTAATATAATCAAACGAGTAACTCGT-CTCTCCAGAATC-TAATTAAGCATAATTTTAG-AAATGTAA--CA-------T--A-AAAGTGTACA---C---------A------TCTCA-TTC-CA--T--GAC---AATTAGAAT----AAATTGTCT-ACG-AAACAACAGA-----GAA-----AATTGTAA-TATCATA-TT---AA-GAAAAattatt
gi|7 : tgtaacatagaaacataatcAGCTCT-ATAAAT------GT-AGA--TGGCT-T-AATCA----TCTA--TACGTGT-T--------------G-AAATTTGAAAGA--T-GTAAAAACTCGCGAA------------TTGAA--A-------------TTGCTT-TACGACAATTGTTAA---A-CAAATA-----TACA-AAATACAG-------C----AAACCCCCAAAACTACATGTATAATCGTCTTCTATGTATGGGGTCCCAGCTGCATTTGTATTATTGTCG----------TTGA--AAAGTCGAAATCACATAATTAATATAATCAGACGAGTAACTCGT-CTCTCCAGAATCATAATTAAGCATAATTTTTAGAAATATAAACCA-------TAAA-AAAGTGTACA-------------A------T-TCATT-C-CA--T--GAC---AATTAGAAT----AAATT-TCT-ACGAAA--AACAGA-----GAA-----ATATGTAACTATCATG-TT--ACA-GAAAAAtctttggtttagattatgccaaa
gi|8 : G-ATTCGCTACATACATAAACAATGTA------------AGGGGGA----GAAAAC---CCTTGC--C---ATTATT-TTTTTTTTTTTCATTTCTTCTAATTGTTTTG----AAAA------TATGTTT-CAAAATACATTT-TTCA----TTTTTTTAAAA--GAAAA-GTCATTACCATAT------------------ATTC--TACG-TTTTTAGGGGGTGG-G--TGTTTT--G-ATTTTATTTTT-----AA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AAC------------------T--T-TGATAA-A---T----AAT-TCACATT-ATATTACCGA-TCGCCT--CTTGGCGGT-CGGTA--Atctttggtttaggattgatgcaaca
gi|9 : atcccgcacttcaaattATG-ATTCGCTAC-------------ATACATAAACAATGTAGGGGGAGAAGAAAACC---C--TGC--C---ATTATT-TTTTT------------------------Ttaatg
gi|9 : aatcccgcacttcaaCTAAT-TGTTT------------------------TG----AAA-------TATGTTT-CAAAAT-CATTT-TTCATTTTTT-------AAAAGAAAA-GTCA-TACCATAT------------------ATTC--TACG-TTTTTAGGGG-TGG-G--TGTTTT--G-A-------TTTTTTTTAA-CATGTCCATAA--------TAA--C------TCCG--CAC-A-AACT--T--T---GA-----------TA--AA-A---T----AAT-TCACA-T-ATATTACCGA-TCGCCT--CTTGGCGG--TGGTA--Attttttcaatttcttctaattgttttgaaatatgtttcaaaatcatttttcattttttaaaagaaaagtcataccatatattctacgtttttaggggtgggtgttttgattttttttaacatgtccataataactccgcacaaactttgataaaataattcacatatattaccgatcgcctcttggcggtggtaataatg
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): AAATATGCAAAAACACTAAAATATGTAGGTTTTCTTTTGTCAGAACTCGGTAGTTACAGGGGGCTTCAC