lowQualScore : 11111 11111111 111111111111111111 11111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111111111111111
lowQualScore : 222 1 4 44 1 4 7777777777777777 6666 77777 4 1 777 4 22 00000 4 4 4 4 77777 4 55 55 4 4 55 22 22222222 55 1 11 4 000000000000000000 4 11 4 4 88888888888 8888888 1 4 4 777 4 4 444444 4 8888888 777 222 1 4 4 4 4 6666 55555 55 444444 4 99999999999999 4 4 4 4 4 4 777 00000 1 8888 33 4 222222 11 1111 222222 1 11 1 55555 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 444 1 11 2222222222222222 2222 5555555555 4444 1 4444444444 11 33 22 222 1 1 2 3333 22 11 1 55555555 1 111 11 1 1 77777777 1 7777777 1 33 11 222 1 1 1 1 22 22 2 1 77777777 1 1111 55555555555555 1 1 1 11 22 22 4 55555 44 77777777777777777 44 2 11 1 22 1 2 1 1 1 1 22222 1111 2 222 1 1 44444 1 33 3333 1 6666666666 333 1 111 1 1 2222 333 11 222 44444 111 3 33 1 1 1 3333 222 22 11 1 2 1 2 4 77777 11 6666666 2 1 1 2 3 111 1 4444444 1 11 33 33 33
lowQualScore : 999 7 0 66 5 0 3333333333333333 2222 88888 0 5 000 0 33 00000 0 0 0 0 66666 0 55 55 0 0 55 33 44444444 55 5 22 6 6 0 222222222222222222 0 6 22 0 0 33333333333 6 3333333 5 6 0 0 000 0 0 6 6 222222 0 2222222 000 777 5 0 0 0 0 1111 11111 55 333333 0 22222222222222 0 0 6 6 6 0 0 0 0 000 00000 7 5555 33 0 888888 7 7 7 33 3 3333 222222 3 3 0 3 3 22 5 11111 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 111 0 88 7 0000000000000000 7 4444 6 6 7 2222222222 0000 3 7 6666666666 44 22 7 33 333 3 3 4 7 6666 11 88 3 33333333 3 999 88 5 3 6 7 00000000 7 7 3 6 2222222 0 3 99 88 7 6 555 5 3 3 3 77 33 6 3 00000000 7 9 3 2222 7 66666666666666 6 3 6 0 3 88 00 7 7 6 22 0 66666 55 8 33333333333333333 77 7 3 6 88 3 00 9999 3 3 3 5 3 3 22222 7777 7 8 333 6 6 3 7 22222 3 7 11 9999 6 6 6 3 6666666666 7 666 3 666 3 2 0 8888 7 000 88 7 7 555 7 66666 777 1 11 3 3 3 5555 7 7 7 333 00 88 3 7 3 3 3 0 33333 88 5555555 6 1 8 3 3 6 7 1 222 3 4444444 3 6 22 11 11 77
lowQualScore : ... . . .. . . ................ .... ..... . . ... . .. ..... . . . . ..... . .. .. . . .. .. ........ .. . .. . . . .................. . . .. . . ........... . ....... . . . . ... . . . . ...... . ....... ... ... . . . . . .... ..... .. ...... . .............. . . . . . . . . . ... ..... . .... .. . ...... . . . .. . .... ...... . . . . . .. . ..... ................................................................................................................................................................................................................................................................................................................. ... . .. . ................ . .... . . . .......... .... . . .......... .. .. . .. ... . . . . .... .. .. . ........ . ... .. . . . . ........ . . . . ....... . . .. .. . . ... . . . . .. .. . . ........ . . . .... . .............. . . . . . .. .. . . . .. . ..... .. . ................. .. . . . .. . .. .... . . . . . . ..... .... . . ... . . . . ..... . . .. .... . . . . .......... . ... . ... . . . .... . ... .. . . ... . ..... ... . .. . . . .... . . . ... .. .. . . . . . . ..... .. ....... . . . . . . . . ... . ....... . . .. .. .. ..
lowQualScore : 000 0 0 00 0 0 0000000000000000 0000 00000 0 0 000 0 00 00000 0 0 0 0 00000 0 00 00 0 0 00 00 00000000 00 0 00 0 0 0 000000000000000000 0 0 00 0 0 00000000000 0 0000000 0 0 0 0 000 0 0 0 0 000000 0 0000000 000 000 0 0 0 0 0 0000 00000 00 000000 0 00000000000000 0 0 0 0 0 0 0 0 0 000 00000 0 0000 33 0 333333 3 3 0 88 2 0000 222222 2 2 0 2 2 55 5 00000 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 555 0 33 3 3333333333333333 3 0000 7 7 3 7777777777 7777 3 3 0000000000 00 00 3 33 333 3 3 7 3 0000 77 77 3 00000000 3 000 33 0 3 7 3 33333333 3 3 3 7 0000000 7 3 00 00 3 0 777 0 3 3 3 00 33 7 3 77777777 3 0 3 0000 3 77777777777777 7 3 0 7 3 00 00 3 3 7 33 0 77777 00 3 00000000000000000 00 3 3 7 33 3 00 0000 3 7 3 0 3 3 77777 7777 3 7 333 0 7 3 3 33333 3 3 00 0000 7 7 7 3 0000000000 3 000 3 777 3 0 7 0000 3 777 33 3 3 777 3 00000 777 7 00 3 3 3 3333 3 3 3 333 77 33 3 3 7 3 7 0 00000 33 7777777 0 0 7 3 3 7 3 7 333 3 0000000 3 7 55 00 00 00
consensus : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAA--TTGCG-AAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCT-AGTACATTGTACATGATTCTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-TA---TTTTTTTCTCCGAGGGAAAATGTC--TATTTTCT-GTCTAGTA---T--ACACATGATAG-ACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTATTTTAAACCA-AACACAGCAG--------AGGCC-TCT-----GG-AATTTC-T--ATCAA-TAAGCC-CG--TAAA-A----TGCA--GT--AGC--A--AAGG------GTG------ATA------C------CCC---TCTC---TA-TTTAAATACATACACGN------------------GG--GTATA-CATA-AT--CA-CCC-----------TTACTA---------AAG--TTAC----T-A--CA----------CAT-----------------A-GA-------------AATTCAGAGGCCTGA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTG---GA-----A---GTGGACCC-TA-CCTTGTTTACCTGGAGCTTTC-------A--CGTGAATTCAG--NCG-ATCGTTGGTGTTG--ATAAAC-TACACATCTTTGATGGTAACATGA-TTT---TCTCAC-TGAA-ACTTTAAAACA--TTGGCTGAAAA-CGACTCCAGAATCGTC-TGTT---GC-ATCTG-CA--TATTCACGCCAGCGGTG--GGTACAA-TTGGGTTTCG--CTAAT-AATTAGAACTTCGAT-CCCGATCTAAATATA-GTC--GAAATTC-TTAT-TTTACCT-NTTAGGTTTGA--TTATATATGATA-TTT-GA-TAGCCTAT-TTTT-ATAAAATGAAA-ATAAAT-TTA----TATTTCAT-GTACTAAATTGATTAAAGTT-TGTCA-AAT-T--AAGCACAATTATCA-TTT-AAAAACGAAATTC-AATATCTCTA-GATTTTACATTTTCCCGGG-TTTTTTCACTATTATAAA---GAGGCATTTCTGA-CTAGAAATT--TA-TTTACAACA---ACTTTTGAAA--GTGAAAAATGATAA-TACAA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC-GA-TTG-TAAGTG-TT-GC-TGT-TTT-G-AGAAAAAT-GGTTT---TAAAAAA-TTGAT-GTATTTTTCATAGAT---TCA-TATGCATCTAATAAAGT-CAATGGTT--ACCATGGAAACATGTGAAA-TATT---GTCG-C-TTTGACAATG-CATA-AT-G-AC-AAGGGACTTT-AC-TTGTTATC--GTGTATTT--TTGTTGA--AACACCAAA--TA-T-GGTATTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTG-CC-TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-GTATCTCTGCATG-GATGCA--TC-GGGTGAAAAAAA--TAATACC-ACAGT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGACTC-AATCCCTGACG-GT-CGA-T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( gi|1 ) : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTACTCCTAAGTACA-TGTAC---ATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTC--TATTTTCT-GTCTAGTA---T--ACACATGATAG-ACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCA-AGCACAGCAG--------TGGCC-TCTTCCCAGGTAATTTC-T--ATCGA-TAAGCC-CG--TAAA-A----TACA--GT--AGC--A--AAGG------GCG------ATA------C------CCC---TCTC---TA-TTTAAATACATACACGC------------------GG--ATATA-CATA-AT--CA-CCC-----------TT-CTA---------AAG--TTAC----T-A--CA----------CAT-----------------A-GAC------------AATTCAGAGGCCTGA--AGCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTA-----A---GTGGACCC-TAACCTTGTTTACCTGGAGCTTTC-------A--TGTGAATTCA---TCG-ATCGTTGGTGTTGTGATAAACCTACACATCTTTGATGTAAACATGAATTT---TCTCAC-TGAA-ACATTAAAACA--T-GGCTGAAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CATTCACGCCAGCGGTG--GGTAAAA-TTGGGTTTCGGCCTAATAAATTAGAACTTCGAT-CCCGATCTAAATATACGTCCGAAAACTC-TTATATTTACCT-TTTAAGTTTGA--TTATATCTGATA-TTT-GA-TAGCCTACATTTTAATAAAATG-AA-ATAAATCTTAATATTATTCCAT-GTACTAAATTGATTAAAGTTGTATCA-AATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACTA-GATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGAAGGCATTTCTG--CTAGATATTAAAAATTTACAACA---ACTTTTGAAAAGGTGAAAAATGATAAGTACAA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC-GAATTG-TAATTG-TT-GC-TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT-ACTCA-TATGCATCTAATAAAGTTCAATGGCTTAACCATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCGTA-AT-G-AC-AAGGGACCTTGACTTTGTTATT--GTGTATTT--TTGTTGA--AACACC--A--TA-T-GGTATTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAGGTGAAAAAAA--TAATACCAACGATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGACTCAAATCCCTGACG-GTCCGA-TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAAT
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAA--TTGCG-AAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAA
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtGAGAGAG---CTTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTC--T--TTTCA-GTCTAGTA---T--ACACATGGTAG-ACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA-----AACCA---CACAGCAG---------GGCC-TCTGCC-AGG--ATTTC-T--TTCAA-TAA-CC-CG--TAAA-A-----ACAT-GT--AGC--A--AAGG-------CG------ATA------C------CCC---TCTC---TA-TTTAAATACATACACG-------------------GG--ATATA-CATA--T--CA-CCC-----------TTACTA---------A-G--TTAC----T-A--CA----------CATTTTTTATTC--------ATGGCTTATTGATATTAAATTCAGAGGCCTGA---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAA-----ATA-GTGGACCC-TA-CCTTGTTTACCTGGAGCTT-C-------A--TGTGAATTCAG--TCG-ATCGTTGGTGTTG--ATCAAC-TACACATCTTTGATGGTAACATGA-TTT---TCTCAC-TGAA-AC-TTAAAACA--TTGGCTGAAAAC-GACTTCAGAATCGTC-TGTT------ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAA-TTGGGTT-CG--CTA-TAA-TTAGAACTTCGAT-CC-GATCTAAATATA-GTC--GAAACTC-TTAT-TTTACCT-TT-AGGTTTGA--TTATATATGATA-TTTTGA-TCGCCTATTTTTTA-TAAAATG-AATATAAAT-TTA----TATTTCAT-GTACTAAATTGATTAAAGTTTTGTCA-ATT----AAGCACAATTATCA-TTT-AAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCCGGG-TTTTTTCACTATTATAAAA---AGGCATTTCTGA-CTAGATATTAAT--TTTACA-CA---CTTTTTGAAA--GTGAAAAATGATAA-TACAA--CACT-CC--TTTTTGTGTTAGAATATCCATTGC-GA-TTG-TAAGTG-TTTGCCTGTTTT--G-AGAAAAAT-GGTTT---TAAAAAA-TTGAT-GTATTTTTCATAGATTAC-CA-TATGCATCTAATAAAGT-CAATGGTT--ACCATGGAAACATCTGAAA-TATT---GTCA-CTTT--ACAATG-CATA-AT-GGAC-AAAGGGACTTGACTT-GTTAT---GTGTATTT--T-GTTGA--A-CACC--AAATA-TTGGTATTTTC-CCAGTA-TTGA-TTT-TC-AAGTTATTGCC--TATTTT-GTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AGGTGAAAAAAA--TAATACC-AC-AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGACTC-AATCCCT-ACGCGT-CGA-T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : AGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTC--TATTTTCTTGTCTAGTA---T--AC-CATGAT-G-ACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCA-CACAC-GCAGGCTACTAACGGCCCTCTGCCCGGAT--TTTCCT--ATCAA-TAG----CG--TAAA-A----ATCAT-GT--AGC--A--AAGG-------CG------ATA------C------CCCC--TCTC---TA-TTCAAATACA-ACACG-------------------GG--ATATATCATA--T--CA-ACT-----------T----A---------AAG--TTAC----TCA--CATTTTTTATT-CATGCTTTATTGATATAAAGA-GA-------------AATTCAGAGGC-TGA---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTG----AGAAATA---GTGG--CC-TA--CTTGTTTACCTG-AG-TTTC-------AATCGTGAATTCAGTCCCG-ATCGTTGGTGTTG--ATAAAC-TACACAT-TTTGATGGTAAC-TGATTTTGCTTCTCCA-TGAAGACTTTCAA-CA--TTGGCTGCAAAACGACTC-AGAATCGTCCTGTTTCTGC-----G-CA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGA---TATATATGATA-TTT-GA-TAGCCTAT-TTTTTATAGAATGAAA-ATAAAT-TTA----TATTTAAT-GTACTAAATT-ATT-AAGTT---TCACAAT-TAAAGCCA-AATTATCA-TTTATAAAATGAAATTCAAATATCTCTA--ATTTT-CATTTT-CCGGGTTTTTTTCACTATTATAA----GAGGCATTTCTGAACTAGAAATT---AATTT-TAACATACACTTTTGAAA--GTGAAAAATGATCA-TACAAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGAATTG-TAAGTG-TT-GC-TG--TTTTGAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGA----TTA-TATGCTTCTAAT-AAGT--AATGG-TTACCGAT-GAAACATGTGAAACTATTC--GTCGAC-TTTGACAATG-CATACATGG-ACAAAGGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAA--TA-T-TGGATTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTG-CCTTA-TTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AGGTGAAAAAAAATTAATACC-ACA--AATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGACTC-AATCC--GACG-GT-CGA-T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAA
gi|10 : AGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCCG--GGAAAATGTT--TATTT-CT-TTCTAGTA---TTAAAACATGATAGGACCTAAGCCCTCTCTt
gi|4 : GGGAAAATACCAATATTTGGT-GTTCAACAAAAT--ACACATAACAA-GTC-AAGTCC-CTTTG
gi|5 : gagagagcttcaagggacagggggttacattttttctctgagggaaatgtcttttcagtctagtatacacatggtagacctaagccctctgctaaactctctgaagcctggaaatttaaaccacacagcagggcctctgccaggatttctttcaataacccgtaaaaacatgtagcaaaggcgatacccctctctatttaaatacatacacgggatatacatatcacccttactaagttactacacattttttattcatggcttattgatattaaattcagaggcctgagctgtgtttataaaattgaactccggtggtgacgaaatagtggaccctaccttgtttacctggagcttcatgtgaattcagtcgatcgttggtgttgatcaactacacatctttgatggtaacatgattttctcactgaaacttaaaacattggctgaaaacgacttcagaatcgtctgttatctgcacattcacgccagcggtgggtacaattgggttcgctataattagaacttcgatccgatctaaatatagtcgaaactcttattttacctttaggtttgattatatatgatattttgatcgcctattttttataaaatgaatataaatttatatttcatgtactaaattgattaaagttttgtcaattaagcacaattatcatttaaaaacgaaattcaatatctctaagattttacattttcccgggttttttcactattataaaaaggcatttctgactagatattaattttacacactttttgaaagtgaaaaatgataatacaacactcctttttgtgttagaatatccattgcgattgtaagtgtttgcctgttttgagaaaaatggttttaaaaaattgatgtatttttcatagattaccatatgcatctaataaagtcaatggttaccatggaaacatctgaaatattgtcactttacaatgcataatggaTCTGAACCCTGG-AAATTTA-----AACCA---CACAGCAG--------AGGC-----------------TC-T--G-CAA-TAAGCC-GT--TAAA-A----TACATGGTTTAGC--G--AAGG------G--------ATA------C------CCCC--TCTC---TAATTTAAATACATACACGG------------------AGT-ATTTA-CATA--T--CAACCC-----------TTACGT---------AAG--TCAC----T-AAACAATTTTTAATTCAT-----------------G-GGCTTAATTGATAAAAATTCAGAGGCCTGATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTGTGA--CGA-----AATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCATTCATTA--TGTGAATTCA---GCGAATCG-TGGTGTT-TGAGAA--CTACACA-CTTTGATGGTAACATG-ATTT---TCTCACTTGAA-ACTTTAAAACATTT-GGTTGAAAA-CGACT-CAGAATCGTC-TG-----GTTATCTGACAGTTATGCACGCCAGCGGTGCAGGTACAA-TTGG--TTCG--CT-AT-AATTAG-ACTTCGAT-CCCGATCTAAATATA-GTC--GAAATTC-TTA---TTACCT-ATTAGGTTTGATGTTTTATATGATATTTT-GAGTAGCCTATGTTTT-ATAAAATGAAA-ATAAATTT--ATATT-TTACATAGTACTAA---GATTAAAGTTATATC--AATTT--AAGCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCTA-GA-TTTACATTTTCCCGGGG---TTTCACTATTATAAA--GAAGGCATTTCTGA-CTAGAAATT--TATTTTAC-AC----ACTTTTGGGAA-GTG-AAAATAATATGCA-AA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC-GA--TGTTAAGTGTTT-GC-AATGTTTGG-AG-AAAATTGGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGAT-TATCAGTGTGCATCTAATAAAG-TCAATGGTT--ACCATGGAAA-ATGTGAAA-TATT---GTCA---CTTGACAATGCATTA-AT-G-AC-AA-GGACTTT-AC-TTGTTACC--GTGTATTT--TTG-TGAACAACACCAAA--TATT-GTTATTTTTTCCAGT-ATTGAGTTTATC-AAGTTATTG--CGTATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA---TAGCGTGAAAAAAA--TAATTCC-ACAGTTATATAGGTTCATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTCAATCGCTGACA-GT-CGACTTGT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAagtattgattttcaagttattgcctattttgtacccattttttgttgaattctggggaaatctatttttagtaacatatctctgcatggatgcatcaggtgaaaaaaataataccacatatagggttcatatgtatagtggtaaagtatatataagtatggactcaatccctacgcgtcgatgtgccaccctttgcatgattcttacgtggaacagcactta
gi|4 : ATTTTA---TA-AACACAGCTC--------AGGCC-TCT------G-AATTTAAT--ATCAA-TAAGCCATGAATAAA-AAATGTGTA--GT--AACTTAGTAAGG------GTGATATGTATA------T------CCCGTGTATG---TA-TTTAAATAt
gi|5 : gagagagcttcaagggacagggggttacattttttctctgagggaaatgtcttttcagtctagtatacacatggtagacctaagccctctgctaaactctctgaagcctggaaatttaaaccacacagcagggcctctgccaggatttctttcaataacccgtaaaaacatgtagcaaaggcgatacccctctcTTTTAAACCACAGCTGATCA----------GGCC-TCT-----G--AATTTT-T--ATCAATTAAGCC-CA--TGAA-T----TAtgaactccggtggtgacgaaatagtggaccctaccttgtttacctggagcttcatgtgaattcagtcgatcgttggtgttgatcaactacacatctttgatggtaacatgattttctcactgaaacttaaaacattggctgaaaacgacttcagaatcgtctgttatctgcacattcacgccagcggtgggtacaattgggttcgctataattagaacttcgatccgatctaaatatagtcgaaactcttattttacctttaggtttgattatatatgatattttgatcgcctattttttataaaatgaatataaatttatatttcatgtactaaattgattaaagttttgtcaattaagcacaattatcatttaaaaacgaaattcaatatctctaagattttacattttcccgggttttttcactattataaaaaggcatttctgactagatattaattttacacactttttgaaagtgaaaaatgataatacaacactcctttttgtgttagaatatccattgcgattgtaagtgtttgcctgttttgagaaaaatggttttaaaaaattgatgtatttttcatagattaccatatgcatctaataaagtcaatggttaccatggaaacatctgaaatattgtcactttacaatgcataatggacaaagggacttgacttgttatgtgtattttgttgaacaccaaatattggtattttcccagtattgattttcaagttattgcctattttgtacccattttttgttgaattctggggaaatctatttttagtaacatatctctgcatggatgcatcaggtgaaaaaaataataccacatatagggttcatatgtatagtggtaaagtatatataagtatggactcaatccctacgcgtcgatgtgccaccctttgcatgattcttacgtggaacagcactta
gi|7 : tctgaaccctggaaatttaaaccacacagcagaggctctgcaataagccgttaaaatacatggtttagcgaagggataccccctctctaatttaaatacatacacggagtatttacatatcaacccttacgtaagtcactaaacaattttGGCC-TCT------G-AATTTC-TCTATCAA-TAA--C-CG--TAAA-A----TATAT-GT--GGT--A--A--G------GTG------ATA------TGTATA-CCC---TCTC---TA-TATATA-AAATACACGT------------------GT--ATATA-TATA-aatgaactccggtgtgacgaaatagtggacccctgaccttgtttacctggagctttcattcattatgtgaattcagcgaatcgtggtgtttgagaactacacactttgatggtaacatgattttctcacttgaaactttaaaacatttggttgaaaacgactcagaatcgtctggttatctgacagttatgcacgccagcggtgcaggtacaattggttcgctataattagacttcgatcccgatctaaatatagtcgaaattcttattacctattaggtttgatgttttatatgatattttgagtagcctatgttttataaaatgaaaataaatttatattttacatagtactaagattaaagttatatcaatttaagcacaattatcatttttaaaattggaattcaacacttctagatttacattttcccggggtttcactattataaagaaggcatttctgactagaaatttattttacacacttttgggaagtgaaaataatatgcaaacacccccttttttgtgttgatatctattacgatgttaagtgtttgcaatgtttggagaaaattggtttgtgtaaaaaaattgatcgttttttcatagattatcagtgtgcatctaataaagtcaatggttaccatggaaaatgtgaaatattgtcacttgacaatgcattaatgacaaggactttacttgttaccgtgtatttttgtgaacaacaccaaatattgttattttttccagtattgagtttatcaagttattgcgtatttttgtacccattttttggtattgaaattctgggagaaaatctatttttagttatacagtatatctgcatggatgcatagcgtgaaaaaaataattccacagttatataggttcatatgtatagtggtaaagtagtaattaagtatcgacttcaatcgctgacagtcgacttgtgccacctttgcatgattcttacgtggaacagcacttat
gi|12 : aatttctatcaatacgccgtaaatatgtggtagggtgatatgtataccctctctaGGCC-TCT------G-AATTTC-T--ATCAA-TAAGCC-AT--GAAA-A----TG-G--GT--AGC-----AAGG------GTG------ATATTATATT------CCC---TCTCGTATA-TATAAATACATAtgtg
gi|13 : GGCC-TCT------G-AATTTC-T--ATCAA-TAAG-C-CG--TAAA-T----TAT---GT--GGT-----AAGG------GTG------Atgt
gi|8 : atGCC-TCT-----GG--ATTTC-T--ACCAA-TAAG-C-CG--TAAA-ATG--TGCAC-GT--AGT-----AAGG------ATG------AC-----------------------------------ATATATACCCCC-----------------------TCTA-CATGTAT--CA-CCC-----------TT--TA---------------TAC----T-A--CA----------CAT-----------------t
gi|7 : AATTTC-T--ATCAA-TACG-C-CG--TAAATA----TGTG--GT-----------AGG------GTG------ATA------TGTATA-CCC---TCTC---TA---TATATATATACACGTGTATTTTATATATAGAGAGG--GTATA-CAT--AT--CA-CCTTACCACATATATT-TTA---------CGG--TTAT----T-G---A----------TAG-----------------A-GA-------------AATTCAGAGGCCTGtttcacggcatattgataaaattcagaggt
gi|6 : AATTTC-T--ATCAA-TAAG-C-CG--TAAA-T----TGC---GT--GGT-----AAGG------GTG------ATA------TGTACA-CCC---CCTC---TA-TTtg
gi|6 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatacatagcacccttactatatAATTTC-T--ATCAA-TAAG-C-CG--TAAA-T----TGT---GT--GGT--A--AAAGTGATCTGT-------ATA------C------CCC----CTC---TA-T----AT-TATAGA-GG------------------GG--GTGTA-CATACATAGCA-CCC-----------TTACTA---------cagagacct
gi|6 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgCC-CT--TACT-A----TATA--AT--AG---A--GGGG------GTGTAC---ATA------CATAGCACCC---TTAC---TA-T----ATA-ATAGAGG-------------------GG--GTGTA-CATA--T--CA-CCC-----------TTACCACGC------AAT--TTACGGCTT-A--TT----------GAT-----------------A-GA-------------AATTCAGAGACCTtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|6 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcaTA------CA-----CCC---CCTC---TA-T---AATATAGA---GG------------------GG--GTATA-CA-G-AT--CA-CTT-----------TTACCACAC------AAT--TTACGGCTT-A--TT----------GAT-----------------A-GA-------------AATTCAGGGTCCTGA----CTGTG-GTT
gi|12 : aaacattcgcaaaacatgctgcaca---TA-TTTA--TATATACGAGA------------------GGGAATATA--ATA--T--CA-CCC-----------TTGCTACCCATTTTCATGGCTTAT----T-G---------------AT-----------------A-GA-------------AATTCAGAGGCCTGcatacatagcacccttactatataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|15 : tatgTTTG--ATGA-TTCTTA-CGTGGAACA-GCACTTAAt
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): ACCGTACATGTAGGAAGGGTGATGCACATCCCCTCTACTATATAACTATTATCCCTACTACACATCTTGTGGCGTATTGATAGATATTCATAGGCCTGT
Unaligned ( gi|11 ): CTGTACATGTAGGAAGGGTGATATGCACATCCCCTCTACTATATAACTATTATCCCTACTACACATCTTGTGGCGTATTGATAGATATTCATAGCT
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Unaligned ( gi|16 ): CTTATTGATAGAAATTCAGAGGCCTGTGCA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 1 2 11 2 333 2222 333 2 222 2 22222 2 1 1 1 22222 1 22 22 2 2 11 333333 22 1 1 1 222 22 2 2 2 22 333 333 2 1 2 333 1 2 2 1 1 22 22 333 2 1 2 1 2222 2 2 22 1 1 1 2 1 4444 2 2 1 1 4 4 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 22222 4444 1 1 111 11 1 11 11 11 1 55555 11 111111111 33333 222222222222 1111111 111111 44444444444444444444444444444444444444444444444444444444444444 222 22222222222222222222 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 111 1 11 888888888888 22 4444444444 11 1111 1 1 2222 1 1 1 1 1 1 1 666666 1 11111 11 1 11 111 11 1 11 1111 22 11 1 1 1 11 1 2 1 2222 11 1 3333 111 111 1 22 1 1 11 1 222222 11 222222 2222222222 1 11 111 1 11 1 11 1111 1 1 22 11 1 1 22222 1 33333333 1 11 1 1 222 222 1 1 1 1 1 1 11 1 1 1111 11 111 111 1 1 1 1 1 1 11 111 11 11 1 2 1 22 1 11 11 11 1 3333 1 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 4 4 0 5 3 0 88 0 111 2222 4 555 0 2 000 0 4 77777 0 5 5 5 88888 5 77 77 0 0 88 4 888888 4 77 2 5 5 5 111 77 0 0 0 77 555 555 0 2 5 0 555 5 0 0 5 5 77 77 555 2 2 0 5 0 5 1111 0 0 77 5 5 5 0 5 2222 0 0 5 5 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 4 2222 3 2 0 0 777 3 44 7 22 0 33 3 33 3 22 7 2 0 77777 99 8 0 6 999999999 3 99999 88888 44 7 5 333333333333 1111111 5 444444 44444444444444444444444444444444444444444444444444444444444444 55 4 999 55 4 3 99999999999999999999 3 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 5 8 777 0 33 3 55 333333333333 3 33 2 2 2 3 8888888888 33 33 3 4444 44 0 55 3 0 1111 0 0 3 3 3 0 0 0 5 0 111111 0 88888 33 0 2 3 33 666 3 22 0 33 4444 00 33 3 0 0 0 33 0 0 3 0 1111 33 0 3 2 3 1111 000 777 0 33 0 0 22 3 3 0 3 3 888888 33 4 999999 4444444444 0 33 3 000 0 33 0 22 3 3 7777 0 0 33 33 0 0 88888 3 0 3 55555555 3 0 2 33 0 2 2 2 0 777 555 3 2 0 0 0 0 0 0 22 0 0 5555 33 3 3 777 3 3 111 0 0 0 0 0 0 33 3 3 777 33 33 0 3 0 0 22 0 33 22 33 0 3333 0 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... .... . ... . . ... . . ..... . . . . ..... . .. .. . . .. . ...... . .. . . . . ... .. . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . .... . . .. . . . . . .... . . . . . . ................................................................................................................................................. ..... . .... . . . . ... . .. . .. . .. . .. . .. . . . ..... .. . . . ......... . ..... ..... .. . . ............ ....... . ...... .............................................................. .. . ... .. . . .................... . ........................................................................................ . . ... . .. . .. ............ . .. . . . . .......... .. .. . .... .. . .. . . .... . . . . . . . . . . ...... . ..... .. . . . .. ... . .. . .. .... .. .. . . . . .. . . . . .... .. . . . . .... ... ... . .. . . .. . . . . . ...... .. . ...... .......... . .. . ... . .. . .. . . .... . . .. .. . . ..... . . . ........ . . . .. . . . . . ... ... . . . . . . . . .. . . .... .. . . ... . . ... . . . . . . .. . . ... .. .. . . . . .. . .. .. .. . .... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 0 55 0 000 0000 0 000 0 5 555 0 0 00000 0 5 0 5 55555 5 55 55 0 0 00 0 555555 0 55 5 5 5 5 555 55 0 0 0 55 000 000 0 5 5 0 000 0 0 0 0 0 55 55 000 5 5 0 0 0 0 0000 0 0 55 5 0 5 0 5 5555 0 0 5 5 0 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 5555 2 5 0 0 555 2 55 0 55 0 88 2 22 2 55 3 5 0 88888 00 0 8 7 444444444 6 11111 11111 22 3 4 777777777777 5555555 8 222222 77777777777777777777777777777777777777777777777777777777777777 55 0 111 55 0 1 99999999999999999999 9 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 0 555 0 88 2 88 222222222222 2 88 5 5 5 2 2222222222 55 88 2 8888 00 0 88 2 0 2222 0 0 2 2 2 0 0 0 0 0 555555 0 55555 88 0 5 2 88 555 2 55 0 88 2222 88 88 2 0 0 0 88 0 0 2 0 2222 88 0 2 5 2 5555 888 555 0 88 0 0 55 2 2 0 2 2 888888 22 0 000000 5555555555 0 88 2 222 0 88 0 55 2 2 8888 0 0 88 88 0 0 55555 2 0 2 88888888 2 0 5 88 0 5 5 5 0 555 888 2 5 0 0 0 0 0 0 55 0 0 0000 88 2 2 000 2 2 000 0 0 0 0 0 0 88 2 2 555 22 88 0 2 0 0 00 0 88 00 88 0 8888 0 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT-----G-----AATTT--CTATCAATAAGCCCGTAAA--A---TGCG--GT--AGCAAAGGGCG------ATA------C------CCC-TCTC---TA-TTTAAATACATACAC------------------GGGGGTAT--A-CATA--T--CA-CCCTTAC-----------TA-------AAGTTAC----T-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACG----AAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGTT-C----ATCTG-C--A--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGA--TTATATATGATA-TTT-GA-TAGCCT--AT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTGT-ATCA-AATT---AA-GCACAATTATCAT-TTTA-AAAACGAAATTCAA-TATCTCTA-GATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTGA-CTAGANATT---AA-TTT-ACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTG-TT-GC--TG--TTTTG-AGAAAAAT-GGTTT-TG--AAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCAA-CTTTGACAATG-CA-TA-AT-G-AC-AA-GGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATA-T-GGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AGGTGAAAAAAA--TAATACC-ACAA-T-ATA-GGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAA--TTGCG-AAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTA-GTACATTGTACATGATTCTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-TA---TTTTTTTCTCCGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTATTTTAAACCAAAC-ACAG-CAGA--------GGCC-TCT-----G---G-AATTT--CTATCAATAAGCCCGTAAA--A---TGCA--GT--AGCAAAGGGTG------ATA------C------CCC-TCTC---TA-TTTAAATACATACAC------------------GNGGGTAT--A-CATA-AT--CA-CCCTTAC-----------TA-------AAGTTAC----T-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTG--G----AA---GTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--C-------GTGAATTCAGNC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGTTGC----ATCTG-C--A--TATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-TTTACCTN-TTAGGTTTGA--TTATATATGATA-TTT-GA-TAGCCT--AT-TTTT-ATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTT-T-GTCA-AATT---AA-GCACAATTATCA--TTTA-AAAACGAAATTCAA-TATCTCTA-GATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTGA-CTAGAAATT---TA-TTT-ACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTG-TT-GC--TG--TTTTG-AGAAAAAT-GGTTT-T---AAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATGTGAAA-TATT---GTCG--CTTTGACAATG-CA-TA-AT-G-AC-AA-GGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATA-T-GGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-GTATCTCTGCATG-GATGCA--TC-GGGTGAAAAAAA--TAATACC-ACAG-T-ATA-GGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAG-CTGGTAAATTTATTTTAAACCAAGC-ACAG-CAGT--------GGCC-TCTTCCCAG---GTAATTT--CTATCGATAAGCCCGTAAA--A---TACA--GT--AGCAAAGGGCG------ATA------C------CCC-TCTC---TA-TTTAAATACATACAC------------------GCGGATAT--A-CATA-AT--CA-CCCTT-C-----------TA-------AAGTTAC----T-ACA---------C-------------------------A-----------T-----------------AG------------ACAATTCAGAGGCCTGAA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGG-G--GTCCTAA---GTGGACCCTA-ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTTGT-GATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACA-T-GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-C--A--CATTCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGA--TTATATCTGATA-TTT-GA-TAGCCTACAT-TTTA-ATAAAATG-AAATAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGT-ATCA-AATCTAAAA-GCACAATTATCAT-TTTA-AAAACGAAATTCAA-TATTACTA-GATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGA-AGGCATTTCTG--CTAGATATTAAAAA-TTT-ACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTG-TT-GC--TGTTTTTTG-AGAAAAATCGGTTT-TA--AAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-AT-G-AC-AA-GGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACC--ATA-T-GGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAGGTGAAAAAAA--TAATACCAACGA-TAACA-GAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : ---G-AATAT--CTATCAATACGCC-ACAAG--A---TGT---GT--AGTA---GG-G------ATA------A-----------------TA-GTTATATA-GTAGA-------------------GGGGATGT--G-CATA--T--CA-CCCTTCC-----------TA-------
gi|12 : ctgtacatgA--------GGCC-TCT-----G-----AATTT--CTATCAATAAGCCATGAAA--A---TG-G--GT--AGC-AAGGGTG------ATATTATATT------CCC-TCTCGTATA-TATAAATACATAatagct
gi|13 : A--------GGCC-TCT-----G-----AATTT--CTATCAATAAG-CCGTAAATTA---TGTG--GT------AAGGGTG------Agt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT-----G-----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAA--TTGCG-AAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACAC-AC-G-CAGGCTACTAACGGCCCTCT-----GCCCG-GATTTTCCTATCAATAG---CGTAAA--A---ATCAT-GT--AGCAAAGG-CG------ATA------C------CCCCTCTC---TA-TTCAAATACA-ACAC------------------G-GGATAT--ATCATA--T--CA-ACTT---------------A-------AAGTTAC----TCACATTTTTTATTC-------------------------A-----------TGCTTTATTGATATAAAGAG------------A-AATTCAGAGGC-TG-A---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-G----AAATAGTGG--CCT--AC-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGT--T-GATAAA-CTACACAT-TTTGATGGTAAC-TG-ATTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAA-CGACTC-AGAATCGTCCTGTT-------TCTG-CGCA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGA--T-ATATATGATA-TTT-GA-TAGCCT--AT-TTTTTATAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATTAA-GTT-T---CACAATT---AAAGCCAAATTATCA--TTTATAAAATGAAATTCAAATATCTCTA--ATTTT-CATTTTCCG-GGTTTTTTTCACTATTATAA----G-AGGCATTTCTGAACTAGAAATT---AA-TTT--TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGA-ATTGTAAGTG-TT-GC--TG--TTTTGAAGAAAAAT-GGTTT-T---AAAAAATTT-T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAG-T-AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGA-CTTTGACAATG-CA-TACATGG-ACAAA-GGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAATA-T-TGGA-TTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AGGTGAAAAAAAATTAATACC-ACAA---ATA-GGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA-----AACCA--C-ACAG-CAG---------GGCC-TCT-----GCCAG-GATTT--CTTTCAATAA-CCCGTAAA--A----ACAT-GT--AGCAAAGG-CG------ATA------C------CCC-TCTC---TA-TTTAAATACATACAC------------------G-GGATAT--A-CATA--T--CA-CCCTTAC-----------TA-------A-GTTAC----T-ACA---------C-------------------------ATTTTTTATTCAT-----------------GGCTTATTGATATTA-AATTCAGAGGCCTG-A---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACG----AAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATCAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAA-CGACTTCAGAATCGTC-TGTT------ATCTG-C--A--CATTCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-T-AATTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGA--TTATATATGATA-TTTTGA-TCGCCT--AT-TTTTTATAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTT-TTGTCA-A-TT---AA-GCACAATTATCA--TTTA-AAAACGAAATTCAA-TATCTCTAAGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---A-AGGCATTTCTGA-CTAGATATT---AA-TTTTACA-CA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACT-CC--TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTG-TTTGCC-TG--TTTTG-AGAAAAAT-GGTTT-T---AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTCA--CTTT-ACAATG-CA-TA-AT-GGAC-AAAGGGACTTG-AC-TTGTTA--T-GTGTATTT--T-GTTGA--A-CACCAAATA-TTGGTA-TTTTC-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTT-GTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AGGTGAAAAAAA--TAATACC-ACA--T-ATA-GGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA-----AACCA--C-ACAG-CAGA--------GGC--TCT-----G----------------CAATAAGCCGTTAAA--A---TACATGGTTTAGCGAAGGG--------ATA------C------CCCCTCTC---TAATTTAAATACATACAC------------------G-GAGTATTTA-CATA--T--CAACCCTTAC-----------GT-------AAGTCAC----T-AAA---------CAATTTTTAATTCATGGGCTTAATTGA-----------T-----------------AA------------A-AATTCAGAGGCCTG-ATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACG----AAATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGT--TTGA-GAA-CTACACA-CTTTGATGGTAACATG-ATTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAA-CGACTC-AGAATCGTC-TGGT-T----ATCTGAC--AGTTATGCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-T-AATTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-A---TTACCTA-TTAGGTTTGATGTTTTATATGATATTTT-GAGTAGCCT--ATGTTTT-ATAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTAT-ATCA-ATTT---AA-GCACAATTATCATTTTTA-AAATTGGAATTCAA-CACTTCTA-GA-TTTACATTTTCCC-GGG--GTTTCACTATTATAAA---GAAGGCATTTCTGA-CTAGAAATT---TATTTT-AC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--G-ATGTTAAGTGTTT-GCAATG--TTTGG-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTCA--C-TTGACAATG-CATTA-AT-G-AC-AA--GGACTTT-AC-TTGTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATT-GTTATTTTTT-CCAGT-ATTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--TA-GCGTGAAAAAAA--TAATTCC-ACAGTT-ATATAGGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : CAAACCACAGTCAG---------GACC--CT-----G-----AATTT--CTATCAATAAG-CCGTAAA--T---TGT---GT--GGTAAA-AGTGATCTGTATA------C------CCC--CTC---TA-T----AT-TATAGA-------------------GGGGGTGT--A-CATACATAGCA-CCCTTAC-----------TA-------t
gi|6 : aaacattcgcaaaacatgctgcaCCCTTACT--A---TATA--AT--AG-AGGGGGTGTAC---ATA------CATAGCACCC-TTAC---TA-T----ATA-ATAGA-------------------GGGGGTGT--A-CATA--T--CA-CCCTTAC-----------CACGC----AATTTACGGCTT-ATT---------G-------------------------A-----------T-----------------AG------------A-AATTCAGAGACCTtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|6 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcaA--------GGTC-TCT-----G-----AATTT--CTATCAATAAG-CCGTAAA--T---TGC---GT--GGT-AAGGGTG------ATA------TGTACA-CCC-CCTC---TA-TT
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatacatagcacccttactatat-AATTT--CTATCAATACG-CCGTAAAT-A---TGTG--GT-------AGGGTG------ATA------TGTATA-CCC-TCTC---TA---TATATATATACACGTGTATTTTATATATAGAGAGGGTAT--A-CAT--AT--CA--CCTTACCACATATATTTTA-------CGGTTAT----T-G-A---------T-------------------------A-----------G-----------------AG------------A-AATTCAGAGGCCTG-
gi|8 : CC-TCT-----G-----AATTT---TATCAATATGCC-GTGAA--AATGTGTA--GT--A-TAAAGGGTG------ATA------C------------------A-TGTAGA---------------------------GGGGGTAT--A-TAT--GT--CA-TCCTTAC-----------TACGTGCACATTTTAC----G-GCT---------T-------------------------ATTGG-------T-----------------AG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT-----G-----AATAT--CTATCAATACGCC-ACAAG--A---TGT---GT--AGTA---GG-G------ATA------A-----------------TA-GTTATATA-GTAGA-------------------GGGGATGT--G-CAT------CA-CCCTTCC-----------TA-------t
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 1 222 1 1 222 1 222 1 22222 1 1 1 1 1 11 1 11 11 1 1 11 222222 11 1 1 1 333333 1 1 1 11 222 222 1 1 1 222 1 1 1 1 1 11 11 222 1 1 1 1 1 1 1 1 11 1 1 1 1 1 2222 1 1 1 1 1 2 333 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 2222 1 1 111 11 1 11 11 11 1 2222 1 11 111111111 1111 1 22222222222222222222 11111 33333333333333333 3333333333333333333 1 2222222222222222222222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 1 11 22 4444444444 11 1111 1 1 2222 1 1 1 1 1 1 1 3333333 1 11 11 11 1 11 111 11 1 11 1 1 22 111 2 1 1 1 2222 11 1 1 111 222 11 1 1 1 22222 11 1 111 1 1 2222 1 11 111 1 11 1 1 1111 2 1 11 11 1 1 22222 1 33333333 1 11 1 1 222 1111 1 1 1 2 2 1 1 1111 11 222 2 1 1 1 1 1 1 11 111 11 11 1 1 1 1 1 11111 1 11 1 2222222 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 1 1 5 5 1 5 88 5 111 5 5 1 000 5 1 000 5 1 77777 5 5 5 5 5 88 5 88 88 5 5 88 1 999999 1 88 1 5 5 5 000000 5 5 5 88 111 111 5 1 5 5 111 5 5 5 5 5 88 88 000 1 1 5 5 5 5 5 5 5 5 88 5 5 5 5 5 3333 5 5 5 5 5 0 555 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 1 4444 3 2 0 0 777 3 2 7 22 0 33 3 33 3 22 7 2 0 1111 5 99 8 0 6 999999999 3 999999 6666 44 7 3 33333333333333333333 66666 3 55555555555555555 666 555 3 5 3 5 9999999999999999999 2 8888 55 4 4 4 4 4 6666666666666666666666 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 6 8 777 0 33 3 2 2 3 3 33 2 2 2 3 1111111111 2 33 3 4444 44 0 55 3 0 1111 0 0 3 3 3 0 0 0 5 0 9999999 0 33 33 33 0 2 3 33 666 3 22 0 33 0 0 3 00 777 0 0 0 3 0 1111 33 0 3 2 3 2 0 000 777 33 0 0 2 3 3 0 3 3 3 55555 33 1 0 777 0 3 5 0000 0 33 3 000 0 33 2 0 0 3 3 7777 0 0 33 33 0 0 33333 2 0 3 55555555 3 0 2 33 0 2 2 1 0 888 6666 2 0 0 0 0 0 2 0 0 5555 3 33 3 999 3 0 0 0 0 0 0 0 33 9 3 777 33 33 0 3 5 0 5 0 77777 0 33 0 8888888 2 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... . . . ... . . ... . . ..... . . . . . .. . .. .. . . .. . ...... . .. . . . . ...... . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . . . . . .. . . . . . .... . . . . . . ... .............................................................................................................. ..... . .... . . . . ... . . . .. . .. . .. . .. . . . .... . .. . . . ......... . ...... .... .. . . .................... ..... . ................. ... ... . . . . ................... . .... .. . . . . . ...................... ................................................................................... . . ... . .. . . . . . .. . . . . .......... . .. . .... .. . .. . . .... . . . . . . . . . . ....... . .. .. .. . . . .. ... . .. . .. . . . .. ... . . . . . .... .. . . . . . . ... ... .. . . . . . . . . . ..... .. . . ... . . . .... . .. . ... . .. . . . . . .... . . .. .. . . ..... . . . ........ . . . .. . . . . . ... .... . . . . . . . . . .... . .. . ... . . . . . . . . .. . . ... .. .. . . . . . . ..... . .. . ....... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 5 55 0 555 5 5 0 555 5 0 555 5 0 00000 5 5 0 5 0 00 5 55 55 5 0 00 0 555555 0 00 0 5 5 5 000000 0 0 0 00 555 000 0 0 5 5 000 0 0 0 0 0 00 55 000 0 0 5 0 5 0 5 5 0 5 00 5 0 5 0 5 5555 0 5 5 5 5 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 0000 2 5 0 0 555 2 5 0 55 0 88 2 22 2 55 3 5 0 2222 5 00 0 8 7 444444444 3 666666 2222 22 1 3 33333333333333333333 88888 3 55555555555555555 444 666 8 7 6 0 5555555555555555555 3 5555 55 0 0 0 0 4 8888888888888888888888 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 0 555 0 88 2 5 5 2 2 88 5 5 5 2 0000000000 5 88 2 8888 00 0 88 2 0 2222 0 0 2 2 2 0 0 0 0 0 0000000 0 88 88 88 0 5 2 88 555 2 55 0 88 0 0 2 88 000 0 0 0 2 0 2222 88 0 2 5 2 8 8 888 555 22 0 0 5 2 2 0 2 2 2 55555 22 0 0 555 0 2 5 8888 0 88 2 222 0 88 5 0 0 2 2 8888 0 0 88 88 0 0 00000 5 0 2 88888888 2 0 5 88 0 5 5 0 0 888 5555 5 0 0 0 0 0 5 0 0 0000 2 88 2 222 2 0 0 0 0 0 0 0 88 8 2 555 22 88 0 2 5 0 5 0 22222 0 88 0 8888888 5 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CAT--TCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATCA-AATT---AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACA-TGTAC---ATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TCATCTG-CA--CAT--TCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTT-GA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTGTATCA-AATT---AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTG-TTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TGAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCAAC-TTTGACAATG-CA-TA-AT-GAC-AAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATA-TGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACA---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACA-TGTAC---ATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCAAGC-ACAG-CAGT--------GGCC-TCTTCCCAGGT---AATTT--CTATCGATAAGCCCGT-AAA--ATAC--A-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GCGGAT----AT--A-CATAAT-CA-CCCTT-C-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------ACAATTCAGAGGCCTGAA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTA--AGTGGACCCTA-ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTTGT-GATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACA-T-GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CAT--TCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGAT--TATATCTGATATTT-GA-TAGCCTACATTTTAATAAAATG-AAATAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGTATCA-AATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACT-AGATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGA-AGGCATTTCTG--CTAGATA-TTAAAAA-TTTACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTG-TTG-C--TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-AT-GAC-AAGGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACC--ATA-TGGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAG-GTGAAAAAAA--TAATACCAACG---ATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : C-TAT------G----AATAT--CTATCAATACGCC-AC-AAG--ATGT--G--T--AG--TA---GG----G-ATA------A----------------TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-CAT-AT-CA-CCCTTCC-----------TA-------
gi|12 : ctgtacatgA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCATG-AAA--ATG---G-GT--AG--C-AAGGG---TG-ATATTATATT-----CCC-TCTCGTATA-TATAAATACA-TAct
gi|13 : A--------GGCC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAATTATGT--G-GT--------AAGGG---TG-Agt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT------G----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTG--AAATTGC-GAAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACAC-AC-G-CAGGCTACTAACGGCCCTCT------GCCCGGATTTTCCTATCAATAG---CGT-AAA--AATC--ATGT--AG--CAAAGG----CG-ATA------C-----CCCCTCTC---TA-TTCAAATACA--ACAC------------------GGGA-T----AT--ATCAT-AT-CA-ACTT---------------A-------AAGTTACTCACATTTTTTATTC-------------------------A-----------TGCTTTATTGATATAAAGAG------------A-AATTCAGAGGC-TG-A---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-GAAATAGTGG--CCT--AC-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGT--T-GATAAA-CTACACAT-TTTGATGGTAAC-TG-ATTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAA-CGACTC-AGAATCGTCCTGT-----T--TCTG-CG--CATATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGAT---ATATATGATATTT-GA-TAGCCTAT-TTTTTATAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATT-AAGTT---TCACAATTA--AAGCCAAATTATCA-TTTATAAAATGAAATTCAAATATCTCT-A-ATTTT-CATTTTCCG-GGTTTTTTTCACTATTAT-AA---G-AGGCATTTCTGAACTAGAAA-TT---AA-TTT-TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGA-ATTGTAAGTG-TTG-C--TG--TTTTGAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAG-T-AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGAC-TTTGACAATG-CA-TACATGGACAAAGGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAATA-TTGGA-TTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAAATTAATACC-ACA---A--ATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA----AA-CCA--C-ACAG-CAG---------GGCC-TCT------GCCAGGATTT--CTTTCAATAA-CCCGT-AAA--A-AC--ATGT--AG--CAAAGG----CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGA-T----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------A-GTTACT-ACA---------C-------------------------ATTTTTTATTCAT-----------------GGCTTATTGATATTA-AATTCAGAGGCCTG-A---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATCAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAA-CGACTTCAGAATCGTC-TGT-----T-ATCTG-CA--CAT--TCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-T-AATTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGAT--TATATATGATATTTTGA-TCGCCTAT-TTTTTATAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTTTGTCA-A-TT---AAGCACAATTATCA--TTTAAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---A-AGGCATTTCTG-ACTAGATA-TT---AATTTTAC-ACA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CA-C-TCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTGCC--TG--TTTTG-AGAAAAAT-GGTTT---T-AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTC-AC-TTT-ACAATG-CA-TA-ATGGACAAAGGGACTTG-AC-TTGTTA--T-GTGTA-TT--TTGTTG---AACACCAAATATTGGTA-TTTTC-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TA-TTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-AC----AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA----AA-CCA--C-ACAG-CAGA--------GGC--TCT------G---------------CAATAAGCCGTT-AAA--ATACATG-GTTTAG--CGAAGGG------ATA------C-----CCCCTCTC---TAATTTAAATACA-TACAC------------------GGAG-T----ATTTA-CAT-AT-CAACCCTTAC-----------GT-------AAGTCACT-AAA---------CAATTTTTAATTCATGGGCTTAATTGA-----------T-----------------AA------------A-AATTCAGAGGCCTG-ATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACGAAATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGT--TTGA-GAA-CTACACA-CTTTGATGGTAACATG-ATTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAA-CGACTC-AGAATCGTC-TGG-----TTATCTGACAGTTAT--GCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-T-AATTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-T--ACCTA-TTAGGTTTGATGTTTTATATGATATTTTGAGTAGCCTAT-GTTTTATAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTATATCA-ATTT---AAGCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCT-AGA-TTTACATTTTCCC-GGG--GTTTCACTATTATAAA---GAAGGCATTTCTG-ACTAGAAATTT---AT-TTTAC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--G-ATGTTAAGTGTTTG-CAATG--TTTGG-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTCA---CTTGACAATG-CATTA-AT-GAC-AA-GGACTTT-AC-TTGTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATTGTTATTTTTT-CCAGT-ATTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--T--AGCGTGAAAAAAA--TAATTCC-ACAGTTAT-ATA-GGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : CAAACCACAGTCAG---------GACC--CT------G----AATTT--CTATCAATAAG-CCGT-AAATTGTGT--G-GT--A----AAAGTGATCTGTATA------C-----CCC--CTC---TA-T----AT-TA-TAGA-------------------GGGGGTGTACAT--A-CAT-AG-CA-CCCTTAC-----------TA-------t
gi|6 : aaacattcgcaaaacatgctgcaA--------GGTC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAA--TTGC----GT--GG--T-AAGGG---TG-ATA------TGTACACCC-CCTC---TA-TT---ATATAGTA-AG------------------GGTGCT----AT--G-TAT-GTACA-CCCtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagg----AATTT--CTATCAATACG-CCGT-AAAT-ATGT--G-GT---------AGGG---TG-ATA------TGTATACCC-TCTC---TA---TATATATA-TACACGTGTATTTTATATATAGAGAGGGT----AT--A-CAT-AT-CA--CCTTACCACATATATTTTA-------CGGTTATT-G-A---------T-------------------------A-----------G-----------------AG------------A-AATTCAGAGGCCTG-
gi|8 : CC-TCT------G----AATTT---TATCAATATG-CCGTGAAA--ATGT----GT--AGTATAAAGGG---TG-ATA------C-----------------A-TGTAGA----------------------------GGGGGT----AT--A-TAT-GT-CA-TCCTTAC-----------TACGTGCACATTTTACG-GCT---------T-------------------------ATTGG-------T-----------------AG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT------G----AATAT--CTATCAATACG-CCAC-AAG--ATGT----GT--AG--T--AGG-----G-ATA-------------------A---TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-C---AT-CA-CCCTTCC-----------TA-------t
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 1 222 1 1 222 1 222 1 22222 1 1 1 1 1 11 1 11 11 1 1 11 222222 11 1 1 1 333333 1 1 1 11 222 222 1 1 1 222 1 1 1 1 1 11 11 222 1 1 1 1 1 1 1 1 11 1 1 1 1 1 2222 1 1 1 1 1 1 222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 2222 1 1 111 11 1 11 11 11 1 2222 1 11 111111111 1111 1 22222222222222222222 11111 33333333333333333 3333333333333333333 1 2222222222222222222222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 1 11 22 4444444444 11 1111 1 1 2222 1 1 1 1 1 1 1 22222 1 11 11 1 11 111 11 1 11 1 1 22 111 1 1 1 2222 11 1 222222 11 1 1 1 22222 11 1 111 1 1 2222 1 11 111 1 11 1 1 1111 1 1 11 11 1 1 111 1 33333333 1 11 1 1 222 1 11 1 1 1 1 1 1 1111 11 222 1 1 1 1 1 1 11 111 11 11 1 1 1 1 1 11111 1 11 1 3333333 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 1 1 5 5 1 5 88 5 111 5 5 1 000 5 1 000 5 1 77777 5 5 5 5 5 88 5 88 88 5 5 88 1 999999 1 88 1 5 5 5 000000 5 5 5 88 111 111 5 1 5 5 111 5 5 5 5 5 88 88 000 1 1 5 5 5 5 5 5 5 5 88 5 5 5 5 5 3333 5 5 5 5 5 5 111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 1 4444 3 2 0 0 777 3 2 7 22 0 33 3 33 3 22 7 2 0 1111 5 99 8 0 6 999999999 3 999999 6666 44 7 3 33333333333333333333 66666 3 55555555555555555 666 555 3 5 3 5 9999999999999999999 2 8888 55 4 4 4 4 4 6666666666666666666666 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 6 8 777 0 33 3 2 2 3 3 33 2 2 2 3 1111111111 2 33 3 4444 44 0 55 3 0 1111 0 0 3 3 3 0 0 0 5 0 55555 3 0 33 33 0 2 3 33 666 3 22 0 33 0 0 3 00 777 3 3 0 0 3 0 1111 33 0 3 2 3 1 3 666666 33 0 0 2 3 3 0 3 3 3 55555 33 1 0 777 0 3 5 0000 0 33 3 000 0 33 2 0 0 3 3 7777 5 0 33 33 0 0 777 3 2 0 3 55555555 3 0 2 33 0 2 2 1 0 888 9 33 2 0 0 0 5 3 3 0 0 5555 3 33 3 999 3 3 3 0 0 0 0 0 0 33 9 3 777 33 33 0 3 5 0 5 0 77777 0 33 0 2222222 2 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... . . . ... . . ... . . ..... . . . . . .. . .. .. . . .. . ...... . .. . . . . ...... . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . . . . . .. . . . . . .... . . . . . . ... .............................................................................................................. ..... . .... . . . . ... . . . .. . .. . .. . .. . . . .... . .. . . . ......... . ...... .... .. . . .................... ..... . ................. ... ... . . . . ................... . .... .. . . . . . ...................... ................................................................................... . . ... . .. . . . . . .. . . . . .......... . .. . .... .. . .. . . .... . . . . . . . . . . ..... . . .. .. . . . .. ... . .. . .. . . . .. ... . . . . . . .... .. . . . . . . ...... .. . . . . . . . . . ..... .. . . ... . . . .... . .. . ... . .. . . . . . .... . . .. .. . . ... . . . . ........ . . . .. . . . . . ... . .. . . . . . . . . . .... . .. . ... . . . . . . . . . .. . . ... .. .. . . . . . . ..... . .. . ....... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 5 55 0 555 5 5 0 555 5 0 555 5 0 00000 5 5 0 5 0 00 5 55 55 5 0 00 0 555555 0 00 0 5 5 5 000000 0 0 0 00 555 000 0 0 5 5 000 0 0 0 0 0 00 55 000 0 0 5 0 5 0 5 5 0 5 00 5 0 5 0 5 5555 0 5 5 5 5 5 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 0000 2 5 0 0 555 2 5 0 55 0 88 2 22 2 55 3 5 0 2222 5 00 0 8 7 444444444 3 666666 2222 22 1 3 33333333333333333333 88888 3 55555555555555555 444 666 8 7 6 0 5555555555555555555 3 5555 55 0 0 0 0 4 8888888888888888888888 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 0 555 0 88 2 5 5 2 2 88 5 5 5 2 0000000000 5 88 2 8888 00 0 88 2 0 2222 0 0 2 2 2 0 0 0 0 0 00000 2 0 88 88 0 5 2 88 555 2 55 0 88 0 0 2 88 000 2 2 0 0 2 0 2222 88 0 2 5 2 0 2 000000 22 0 0 5 2 2 0 2 2 2 55555 22 0 0 555 0 2 5 8888 0 88 2 222 0 88 5 0 0 2 2 8888 5 0 88 88 0 0 555 2 5 0 2 88888888 2 0 5 88 0 5 5 0 0 888 0 22 5 0 0 0 0 2 2 0 0 0000 2 88 2 222 2 2 2 0 0 0 0 0 0 88 8 2 555 22 88 0 2 5 0 5 0 22222 0 88 0 2222222 5 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATCAATTT---AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATCAAATT---AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCAAGC-ACAG-CAGT--------GGCC-TCTTCCCAGGT---AATTT--CTATCGATAAGCCCGT-AAA--ATAC--A-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GCGGAT----AT--A-CATAAT-CA-CCCTT-C-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------ACAATTCAGAGGCCTGAA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTA--AGTGGACCCTA-ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTTGT-GATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACA-T-GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CATTCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGAT--TATATCTGATA-TTTGA-TAGCCTACATTTTAATAAAATG-AAATAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGTATCAAATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACT-AGATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGA-AGGCATTTCTG--CTAGATA-TTAAAAA-TTTACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTG-TTG-C--TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-AT-GAC-AAGGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACC--ATA-TGGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAG-GTGAAAAAAA--TAATACCAACG---ATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : C-TAT------G----AATAT--CTATCAATACGCC-AC-AAG--ATGT--G--T--AG--TA---GG----G-ATA------A----------------TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-CAT-AT-CA-CCCTTCC-----------TA-------
gi|12 : ctgtacatgA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCATG-AAA--ATG---G-GT--AG--C-AAGGG---TG-ATATTATATT-----CCC-TCTCGTATA-TATAAATACA-TAct
gi|13 : A--------GGCC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAATTATGT--G-GT--------AAGGG---TG-Agt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT------G----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTG--AAATTGC-GAAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACAC-AC-G-CAGGCTACTAACGGCCCTCT------GCCCGGATTTTCCTATCAATAG---CGT-AAA--AATC--ATGT--AG--CAAAGG----CG-ATA------C-----CCCCTCTC---TA-TTCAAATACA--ACAC------------------GGGA-T----AT--ATCAT-AT-CA-ACTT---------------A-------AAGTTACTCACATTTTTTATTC-------------------------A-----------TGCTTTATTGATATAAAGAG------------A-AATTCAGAGGC-TG-A---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-GAAATAGTGG--CCT--AC-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGT--T-GATAAA-CTACACAT-TTTGATGGTAAC-TG-ATTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAA-CGACTC-AGAATCGTCCTGT-----TTCTGCG-CA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGAT---ATATATGATATTT-GA-TAGCCTAT-TTTTTATAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATT-AAGTTTCA-CAATTA---AAGCCAAATTATCA-TTTATAAAATGAAATTCAAATATCTCT-A-ATTTT-CATTTTCCG-GGTTTTTTTCACTATTAT-AA---G-AGGCATTTCTGAACTAGAAA-TT---AA-TTT-TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGA-ATTGTAAGTG-TTG-C--TG--TTTTGAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAG-T-AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGAC-TTTGACAATG-CA-TACATGGACAAAGGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAATATTGG-A-TTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAAATTAATACC-ACA---A--ATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA----AA-CCA--C-ACAG-CAG---------GGCC-TCT------GCCAGGATTT--CTTTCAATAA-CCCGT-AAA--A-AC--ATGT--AG--CAAAGG----CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGA-T----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------A-GTTACT-ACA---------C-------------------------ATTTTTTATTCAT-----------------GGCTTATTGATATTA-AATTCAGAGGCCTG-A---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATCAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAA-CGACTTCAGAATCGTC-TGT-----T-ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-T-AATTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGAT--TATATATGATATTTTGA-TCGCCTAT-TTTTTATAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTTTGTCAA-TT---AAGCACAATTATCA--TTTAAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---A-AGGCATTTCTG-ACTAGATA-TT---AATTTTAC-ACA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CA-C-TCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTGCC--TG--TTTTG-AGAAAAAT-GGTTT---T-AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTC-AC-TTT-ACAATG-CA-TA-ATGGACAAAGGGACTTG-AC-TTGTTA--T-GTGTA-TT--TTGTTG---AACACCAAATATTGGTA-TTTTC-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TA-TTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-AC----AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA----AA-CCA--C-ACAG-CAGA--------GGC--TCT------G---------------CAATAAGCCGTT-AAA--ATACATG-GTTTAG--CGAAGGG------ATA------C-----CCCCTCTC---TAATTTAAATACA-TACAC------------------GGAG-T----ATTTA-CAT-AT-CAACCCTTAC-----------GT-------AAGTCACT-AAA---------CAATTTTTAATTCATGGGCTTAATTGA-----------T-----------------AA------------A-AATTCAGAGGCCTG-ATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACGAAATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGT--TTGA-GAA-CTACACA-CTTTGATGGTAACATG-ATTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAA-CGACTC-AGAATCGTC-TGG-----TTATCTGACAGTTATGCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-T-AATTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-T--ACCTA-TTAGGTTTGATGTTTTATATGATATTTTGAGTAGCCTAT-GTTTTATAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTATATCAATTT---AAGCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCT-AGA-TTTACATTTTCCC-GGG--GTTTCACTATTATAAA---GAAGGCATTTCTG-ACTAGAAATTT---AT-TTTAC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--G-ATGTTAAGTGTTTG-CAATG--TTTGG-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTC-AC--TTGACAATG-CATTA-AT-GACAA--GGACTTT-AC-TTGTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATTGTTATTTTTT-CCAGT-ATTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--T--AGCGTGAAAAAAA--TAATTCC-ACAGTTAT-ATA-GGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : CAAACCACAGTCAG---------GACC--CT------G----AATTT--CTATCAATAAG-CCGT-AAATTGTGT--G-GT--A----AAAGTGATCTGTATA------C-----CCC--CTC---TA-T----AT-TA-TAGA-------------------GGGGGTGTACAT--A-CAT-AG-CA-CCCTTAC-----------TA-------t
gi|6 : aaacattcgcaaaacatgctgcaA--------GGTC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAA--TTGC----GT--GG--T-AAGGG---TG-ATA------TGTACACCC-CCTC---TA-TT---ATATAGTA-AG------------------GGTGCT----AT--G-TAT-GTACA-CCCtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagg----AATTT--CTATCAATACG-CCGT-AAAT-ATGT--G-GT---------AGGG---TG-ATA------TGTATACCC-TCTC---TA---TATATATA-TACACGTGTATTTTATATATAGAGAGGGT----AT--A-CAT-AT-CA--CCTTACCACATATATTTTA-------CGGTTATT-G-A---------T-------------------------A-----------G-----------------AG------------A-AATTCAGAGGCCTG-
gi|8 : CC-TCT------G----AATTT---TATCAATATG-CCGTGAAA--ATGT----GT--AGTATAAAGGG---TG-ATA------C-----------------A-TGTAGA----------------------------GGGGGT----AT--A-TAT-GT-CA-TCCTTAC-----------TACGTGCACATTTTACG-GCT---------T-------------------------ATTGG-------T-----------------AG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT------G----AATAT--CTATCAATACG-CCAC-AAG--ATGT----GT--AG--T--AGG-----G-ATA-------------------A---TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-C---AT-CA-CCCTTCC-----------TA-------t
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 1 222 1 1 222 1 222 1 22222 1 1 1 1 1 11 1 11 11 1 1 11 222222 11 1 1 1 333333 1 1 1 11 222 222 1 1 1 222 1 1 1 1 1 11 11 222 1 1 1 1 1 1 1 1 11 1 1 1 1 1 2222 1 1 1 1 1 1 222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 2222 1 1 111 11 1 11 11 11 1 2222 1 11 111111111 1111 1 22222222222222222222 11111 33333333333333333 3333333333333333333 1 2222222222222222222222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 1 11 22 4444444444 11 1111 1 1 2222 1 1 1 1 1 1 1 22222 1 11 11 1 11 111 11 1 11 1 1 22 111 1 1 1 2222 11 1 1 222 11 1 1 1 22222 11 1 111 1 1 2222 1 11 111 1 11 1 1 1111 1 1 11 11 1 1 111 1 33333333 1 11 1 1 222 1 11 1 1 1 1 1 1 1111 11 222 1 1 1 1 1 1 11 111 11 11 1 1 1 1 1 11111 1 11 1 3333333 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 1 1 5 5 1 5 88 5 111 5 5 1 000 5 1 000 5 1 77777 5 5 5 5 5 88 5 88 88 5 5 88 1 999999 1 88 1 5 5 5 000000 5 5 5 88 111 111 5 1 5 5 111 5 5 5 5 5 88 88 000 1 1 5 5 5 5 5 5 5 5 88 5 5 5 5 5 3333 5 5 5 5 5 5 111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 1 4444 3 2 0 0 777 3 2 7 22 0 33 3 33 3 22 7 2 0 1111 5 99 8 0 6 999999999 3 999999 6666 44 7 3 33333333333333333333 66666 3 55555555555555555 666 555 3 5 3 5 9999999999999999999 2 8888 55 4 4 4 4 4 6666666666666666666666 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 6 8 777 0 33 3 2 2 3 3 33 2 2 2 3 1111111111 2 33 3 4444 44 0 55 3 0 1111 0 0 3 3 3 0 0 0 5 0 55555 3 0 33 33 0 2 3 33 666 3 22 0 33 0 0 3 00 777 3 3 0 0 3 0 1111 33 0 3 2 3 1 3 0 333 33 0 0 2 3 3 0 3 3 3 55555 33 1 0 777 0 3 5 0000 0 33 3 000 0 33 2 0 0 3 3 7777 5 0 33 33 0 0 777 3 2 0 3 55555555 3 0 2 33 0 2 2 1 0 888 9 33 2 0 0 0 5 3 3 0 0 5555 3 33 3 999 3 3 3 0 0 0 0 0 0 33 9 3 777 33 33 0 3 5 0 5 0 77777 0 33 0 2222222 2 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... . . . ... . . ... . . ..... . . . . . .. . .. .. . . .. . ...... . .. . . . . ...... . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . . . . . .. . . . . . .... . . . . . . ... .............................................................................................................. ..... . .... . . . . ... . . . .. . .. . .. . .. . . . .... . .. . . . ......... . ...... .... .. . . .................... ..... . ................. ... ... . . . . ................... . .... .. . . . . . ...................... ................................................................................... . . ... . .. . . . . . .. . . . . .......... . .. . .... .. . .. . . .... . . . . . . . . . . ..... . . .. .. . . . .. ... . .. . .. . . . .. ... . . . . . . .... .. . . . . . . . ... .. . . . . . . . . . ..... .. . . ... . . . .... . .. . ... . .. . . . . . .... . . .. .. . . ... . . . . ........ . . . .. . . . . . ... . .. . . . . . . . . . .... . .. . ... . . . . . . . . . .. . . ... .. .. . . . . . . ..... . .. . ....... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 5 55 0 555 5 5 0 555 5 0 555 5 0 00000 5 5 0 5 0 00 5 55 55 5 0 00 0 555555 0 00 0 5 5 5 000000 0 0 0 00 555 000 0 0 5 5 000 0 0 0 0 0 00 55 000 0 0 5 0 5 0 5 5 0 5 00 5 0 5 0 5 5555 0 5 5 5 5 5 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 0000 2 5 0 0 555 2 5 0 55 0 88 2 22 2 55 3 5 0 2222 5 00 0 8 7 444444444 3 666666 2222 22 1 3 33333333333333333333 88888 3 55555555555555555 444 666 8 7 6 0 5555555555555555555 3 5555 55 0 0 0 0 4 8888888888888888888888 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 0 555 0 88 2 5 5 2 2 88 5 5 5 2 0000000000 5 88 2 8888 00 0 88 2 0 2222 0 0 2 2 2 0 0 0 0 0 00000 2 0 88 88 0 5 2 88 555 2 55 0 88 0 0 2 88 000 2 2 0 0 2 0 2222 88 0 2 5 2 0 2 0 555 22 0 0 5 2 2 0 2 2 2 55555 22 0 0 555 0 2 5 8888 0 88 2 222 0 88 5 0 0 2 2 8888 5 0 88 88 0 0 555 2 5 0 2 88888888 2 0 5 88 0 5 5 0 0 888 0 22 5 0 0 0 0 2 2 0 0 0000 2 88 2 222 2 2 2 0 0 0 0 0 0 88 8 2 555 22 88 0 2 5 0 5 0 22222 0 88 0 2222222 5 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCAAGC-ACAG-CAGT--------GGCC-TCTTCCCAGGT---AATTT--CTATCGATAAGCCCGT-AAA--ATAC--A-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GCGGAT----AT--A-CATAAT-CA-CCCTT-C-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------ACAATTCAGAGGCCTGAA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTA--AGTGGACCCTA-ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTTGT-GATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACA-T-GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CATTCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGAT--TATATCTGATA-TTTGA-TAGCCTACATTTTAATAAAATG-AAATAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGTATCAAATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACT-AGATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGA-AGGCATTTCTG--CTAGATA-TTAAAAA-TTTACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTG-TTG-C--TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-AT-GAC-AAGGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACC--ATA-TGGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAG-GTGAAAAAAA--TAATACCAACG---ATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : C-TAT------G----AATAT--CTATCAATACGCC-AC-AAG--ATGT--G--T--AG--TA---GG----G-ATA------A----------------TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-CAT-AT-CA-CCCTTCC-----------TA-------
gi|12 : ctgtacatgA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCATG-AAA--ATG---G-GT--AG--C-AAGGG---TG-ATATTATATT-----CCC-TCTCGTATA-TATAAATACA-TAct
gi|13 : A--------GGCC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAATTATGT--G-GT--------AAGGG---TG-Agt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT------G----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTG--AAATTGC-GAAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACAC-AC-G-CAGGCTACTAACGGCCCTCT------GCCCGGATTTTCCTATCAATAG---CGT-AAA--AATC--ATGT--AG--CAAAGG----CG-ATA------C-----CCCCTCTC---TA-TTCAAATACA--ACAC------------------GGGA-T----AT--ATCAT-AT-CA-ACTT---------------A-------AAGTTACTCACATTTTTTATTC-------------------------A-----------TGCTTTATTGATATAAAGAG------------A-AATTCAGAGGC-TG-A---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-GAAATAGTGG--CCT--AC-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGT--T-GATAAA-CTACACAT-TTTGATGGTAAC-TG-ATTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAA-CGACTC-AGAATCGTCCTGT-----TTCTGCG-CA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGAT---ATATATGATATTT-GA-TAGCCTAT-TTTTTATAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATT-AAGTTTCA-C-AATTA--AAGCCAAATTATCA-TTTATAAAATGAAATTCAAATATCTCT-A-ATTTT-CATTTTCCG-GGTTTTTTTCACTATTAT-AA---G-AGGCATTTCTGAACTAGAAA-TT---AA-TTT-TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGA-ATTGTAAGTG-TTG-C--TG--TTTTGAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAG-T-AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGAC-TTTGACAATG-CA-TACATGGACAAAGGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAATATTGG-A-TTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAAATTAATACC-ACA---A--ATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA----AA-CCA--C-ACAG-CAG---------GGCC-TCT------GCCAGGATTT--CTTTCAATAA-CCCGT-AAA--A-AC--ATGT--AG--CAAAGG----CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGA-T----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------A-GTTACT-ACA---------C-------------------------ATTTTTTATTCAT-----------------GGCTTATTGATATTA-AATTCAGAGGCCTG-A---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATCAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAA-CGACTTCAGAATCGTC-TGT-----T-ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-T-AATTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGAT--TATATATGATATTTTGA-TCGCCTAT-TTTTTATAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTTTGTC-AATT---AAGCACAATTATCA--TTTAAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---A-AGGCATTTCTG-ACTAGATA-TT---AATTTTAC-ACA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CA-C-TCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTGCC--TG--TTTTG-AGAAAAAT-GGTTT---T-AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTC-AC-TTT-ACAATG-CA-TA-ATGGACAAAGGGACTTG-AC-TTGTTA--T-GTGTA-TT--TTGTTG---AACACCAAATATTGGTA-TTTTC-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TA-TTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-AC----AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA----AA-CCA--C-ACAG-CAGA--------GGC--TCT------G---------------CAATAAGCCGTT-AAA--ATACATG-GTTTAG--CGAAGGG------ATA------C-----CCCCTCTC---TAATTTAAATACA-TACAC------------------GGAG-T----ATTTA-CAT-AT-CAACCCTTAC-----------GT-------AAGTCACT-AAA---------CAATTTTTAATTCATGGGCTTAATTGA-----------T-----------------AA------------A-AATTCAGAGGCCTG-ATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACGAAATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGT--TTGA-GAA-CTACACA-CTTTGATGGTAACATG-ATTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAA-CGACTC-AGAATCGTC-TGG-----TTATCTGACAGTTATGCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-T-AATTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-T--ACCTA-TTAGGTTTGATGTTTTATATGATATTTTGAGTAGCCTAT-GTTTTATAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTATATC-AATTT--AAGCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCT-AGA-TTTACATTTTCCC-GGG--GTTTCACTATTATAAA---GAAGGCATTTCTG-ACTAGAAATTT---AT-TTTAC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--G-ATGTTAAGTGTTTG-CAATG--TTTGG-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTC-AC--TTGACAATG-CATTA-AT-GACAA--GGACTTT-AC-TTGTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATTGTTATTTTTT-CCAGT-ATTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--T--AGCGTGAAAAAAA--TAATTCC-ACAGTTAT-ATA-GGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : CAAACCACAGTCAG---------GACC--CT------G----AATTT--CTATCAATAAG-CCGT-AAATTGTGT--G-GT--A----AAAGTGATCTGTATA------C-----CCC--CTC---TA-T----AT-TA-TAGA-------------------GGGGGTGTACAT--A-CAT-AG-CA-CCCTTAC-----------TA-------t
gi|6 : aaacattcgcaaaacatgctgcaA--------GGTC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAA--TTGC----GT--GG--T-AAGGG---TG-ATA------TGTACACCC-CCTC---TA-TT---ATATAGTA-AG------------------GGTGCT----AT--G-TAT-GTACA-CCCtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagg----AATTT--CTATCAATACG-CCGT-AAAT-ATGT--G-GT---------AGGG---TG-ATA------TGTATACCC-TCTC---TA---TATATATA-TACACGTGTATTTTATATATAGAGAGGGT----AT--A-CAT-AT-CA--CCTTACCACATATATTTTA-------CGGTTATT-G-A---------T-------------------------A-----------G-----------------AG------------A-AATTCAGAGGCCTG-
gi|8 : CC-TCT------G----AATTT---TATCAATATG-CCGTGAAA--ATGT----GT--AGTATAAAGGG---TG-ATA------C-----------------A-TGTAGA----------------------------GGGGGT----AT--A-TAT-GT-CA-TCCTTAC-----------TACGTGCACATTTTACG-GCT---------T-------------------------ATTGG-------T-----------------AG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT------G----AATAT--CTATCAATACG-CCAC-AAG--ATGT----GT--AG--T--AGG-----G-ATA-------------------A---TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-C---AT-CA-CCCTTCC-----------TA-------t
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 1 222 1 1 222 1 222 1 22222 1 1 1 1 1 11 1 11 11 1 1 11 222222 11 1 1 1 333333 1 1 1 11 222 222 1 1 1 222 1 1 1 1 1 11 11 222 1 1 1 1 1 1 1 1 11 1 1 1 1 1 2222 1 1 1 1 1 1 222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 2222 1 1 111 11 1 11 11 11 1 2222 1 11 111111111 1111 1 22222222222222222222 11111 33333333333333333 3333333333333333333 1 2222222222222222222222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 111 1 11 22 4444444444 11 1111 1 1 2222 1 1 1 1 1 1 1 22222 1 11 11 1 11 111 11 1 11 1 1 22 111 1 1 1 2222 11 1 1 222 11 1 1 1 22222 11 1 111 1 1 2222 1 11 111 1 11 1 1 1111 1 1 11 11 1 1 111 1 33333333 1 11 1 1 222 1 11 1 1 1 1 1 1 1111 11 222 1 1 1 1 1 1 11 111 11 11 1 1 1 1 1 11111 1 11 1 3333333 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 1 1 5 5 1 5 88 5 111 5 5 1 000 5 1 000 5 1 77777 5 5 5 5 5 88 5 88 88 5 5 88 1 999999 1 88 1 5 5 5 000000 5 5 5 88 111 111 5 1 5 5 111 5 5 5 5 5 88 88 000 1 1 5 5 5 5 5 5 5 5 88 5 5 5 5 5 3333 5 5 5 5 5 5 111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 1 4444 3 2 0 0 777 3 2 7 22 0 33 3 33 3 22 7 2 0 1111 5 99 8 0 6 999999999 3 999999 6666 44 7 3 33333333333333333333 66666 3 55555555555555555 666 555 3 5 3 5 9999999999999999999 2 8888 55 4 4 4 4 4 6666666666666666666666 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 6 8 777 0 33 3 2 2 3 3 33 2 2 2 3 1111111111 2 33 3 4444 44 0 55 3 0 1111 0 0 3 3 3 0 0 0 5 0 55555 3 0 33 33 0 2 3 33 666 3 22 0 33 0 0 3 00 777 3 3 0 0 3 0 1111 33 0 3 2 3 1 3 0 333 33 0 0 2 3 3 0 3 3 3 55555 33 1 0 777 0 3 5 0000 0 33 3 000 0 33 2 0 0 3 3 7777 5 0 33 33 0 0 777 3 2 0 3 55555555 3 0 2 33 0 2 2 1 0 888 9 33 2 0 0 0 5 3 3 0 0 5555 3 33 3 999 3 3 3 0 0 0 0 0 0 33 9 3 777 33 33 0 3 5 0 5 0 77777 0 33 0 2222222 2 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... . . . ... . . ... . . ..... . . . . . .. . .. .. . . .. . ...... . .. . . . . ...... . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . . . . . .. . . . . . .... . . . . . . ... .............................................................................................................. ..... . .... . . . . ... . . . .. . .. . .. . .. . . . .... . .. . . . ......... . ...... .... .. . . .................... ..... . ................. ... ... . . . . ................... . .... .. . . . . . ...................... ................................................................................... . . ... . .. . . . . . .. . . . . .......... . .. . .... .. . .. . . .... . . . . . . . . . . ..... . . .. .. . . . .. ... . .. . .. . . . .. ... . . . . . . .... .. . . . . . . . ... .. . . . . . . . . . ..... .. . . ... . . . .... . .. . ... . .. . . . . . .... . . .. .. . . ... . . . . ........ . . . .. . . . . . ... . .. . . . . . . . . . .... . .. . ... . . . . . . . . . .. . . ... .. .. . . . . . . ..... . .. . ....... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 5 55 0 555 5 5 0 555 5 0 555 5 0 00000 5 5 0 5 0 00 5 55 55 5 0 00 0 555555 0 00 0 5 5 5 000000 0 0 0 00 555 000 0 0 5 5 000 0 0 0 0 0 00 55 000 0 0 5 0 5 0 5 5 0 5 00 5 0 5 0 5 5555 0 5 5 5 5 5 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 0000 2 5 0 0 555 2 5 0 55 0 88 2 22 2 55 3 5 0 2222 5 00 0 8 7 444444444 3 666666 2222 22 1 3 33333333333333333333 88888 3 55555555555555555 444 666 8 7 6 0 5555555555555555555 3 5555 55 0 0 0 0 4 8888888888888888888888 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 0 555 0 88 2 5 5 2 2 88 5 5 5 2 0000000000 5 88 2 8888 00 0 88 2 0 2222 0 0 2 2 2 0 0 0 0 0 00000 2 0 88 88 0 5 2 88 555 2 55 0 88 0 0 2 88 000 2 2 0 0 2 0 2222 88 0 2 5 2 0 2 0 555 22 0 0 5 2 2 0 2 2 2 55555 22 0 0 555 0 2 5 8888 0 88 2 222 0 88 5 0 0 2 2 8888 5 0 88 88 0 0 555 2 5 0 2 88888888 2 0 5 88 0 5 5 0 0 888 0 22 5 0 0 0 0 2 2 0 0 0000 2 88 2 222 2 2 2 0 0 0 0 0 0 88 8 2 555 22 88 0 2 5 0 5 0 22222 0 88 0 2222222 5 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCAAGC-ACAG-CAGT--------GGCC-TCTTCCCAGGT---AATTT--CTATCGATAAGCCCGT-AAA--ATAC--A-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GCGGAT----AT--A-CATAAT-CA-CCCTT-C-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------ACAATTCAGAGGCCTGAA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTA--AGTGGACCCTA-ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTTGT-GATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACA-T-GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CATTCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGAT--TATATCTGATA-TTTGA-TAGCCTACATTTTAATAAAATG-AAATAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGTATCAAATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACT-AGATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGA-AGGCATTTCTG--CTAGATA-TTAAAAA-TTTACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTG-TTG-C--TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-AT-GAC-AAGGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACC--ATA-TGGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAG-GTGAAAAAAA--TAATACCAACG---ATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : C-TAT------G----AATAT--CTATCAATACGCC-AC-AAG--ATGT--G--T--AG--TA---GG----G-ATA------A----------------TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-CAT-AT-CA-CCCTTCC-----------TA-------
gi|12 : ctgtacatgA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCATG-AAA--ATG---G-GT--AG--C-AAGGG---TG-ATATTATATT-----CCC-TCTCGTATA-TATAAATACA-TAct
gi|13 : A--------GGCC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAATTATGT--G-GT--------AAGGG---TG-Agt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT------G----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTG--AAATTGC-GAAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACAC-AC-G-CAGGCTACTAACGGCCCTCT------GCCCGGATTTTCCTATCAATAG---CGT-AAA--AATC--ATGT--AG--CAAAGG----CG-ATA------C-----CCCCTCTC---TA-TTCAAATACA--ACAC------------------GGGA-T----AT--ATCAT-AT-CA-ACTT---------------A-------AAGTTACTCACATTTTTTATTC-------------------------A-----------TGCTTTATTGATATAAAGAG------------A-AATTCAGAGGC-TG-A---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-GAAATAGTGG--CCT--AC-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGT--T-GATAAA-CTACACAT-TTTGATGGTAAC-TG-ATTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAA-CGACTC-AGAATCGTCCTGT-----TTCTGCG-CA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAAT-AATTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGAT---ATATATGATATTT-GA-TAGCCTAT-TTTTTATAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATT-AAGTTTCA-C-AATTA--AAGCCAAATTATCA-TTTATAAAATGAAATTCAAATATCTCT-A-ATTTT-CATTTTCCG-GGTTTTTTTCACTATTAT-AA---G-AGGCATTTCTGAACTAGAAA-TT---AA-TTT-TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGA-ATTGTAAGTG-TTG-C--TG--TTTTGAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAG-T-AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGAC-TTTGACAATG-CA-TACATGGACAAAGGGACTTT-AC-TTGTTATTTCGTGTATTTTGTTGTTG---AACACCAAATATTGG-A-TTTTT-CCCGT-ATTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAAATTAATACC-ACA---A--ATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA----AA-CCA--C-ACAG-CAG---------GGCC-TCT------GCCAGGATTT--CTTTCAATAA-CCCGT-AAA--A-AC--ATGT--AG--CAAAGG----CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGA-T----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------A-GTTACT-ACA---------C-------------------------ATTTTTTATTCAT-----------------GGCTTATTGATATTA-AATTCAGAGGCCTG-A---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATCAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAA-CGACTTCAGAATCGTC-TGT-----T-ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-T-AATTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGAT--TATATATGATATTTTGA-TCGCCTAT-TTTTTATAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTTTGTC-AATT---AAGCACAATTATCA--TTTAAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---A-AGGCATTTCTG-ACTAGATA-TT---AATTTTAC-ACA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CA-C-TCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTGCC--TG--TTTTG-AGAAAAAT-GGTTT---T-AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTC-AC-TTT-ACAATG-CA-TA-ATGGACAAAGGGACTTG-AC-TTGTTA--T-GTGTA-TT--TTGTTG---AACACCAAATATTGGTA-TTTTC-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TA-TTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-AC----AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA----AA-CCA--C-ACAG-CAGA--------GGC--TCT------G---------------CAATAAGCCGTT-AAA--ATACATG-GTTTAG--CGAAGGG------ATA------C-----CCCCTCTC---TAATTTAAATACA-TACAC------------------GGAG-T----ATTTA-CAT-AT-CAACCCTTAC-----------GT-------AAGTCACT-AAA---------CAATTTTTAATTCATGGGCTTAATTGA-----------T-----------------AA------------A-AATTCAGAGGCCTG-ATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACGAAATAGTGGACCCCTGACCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGT--TTGA-GAA-CTACACA-CTTTGATGGTAACATG-ATTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAA-CGACTC-AGAATCGTC-TGG-----TTATCTGACAGTTATGCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-T-AATTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-T--ACCTA-TTAGGTTTGATGTTTTATATGATATTTTGAGTAGCCTAT-GTTTTATAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTATATC-AATTT--AAGCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCT-AGA-TTTACATTTTCCC-GGG--GTTTCACTATTATAAA---GAAGGCATTTCTG-ACTAGAAATTT---AT-TTTAC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--G-ATGTTAAGTGTTTG-CAATG--TTTGG-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTC-AC--TTGACAATG-CATTA-AT-GACAA--GGACTTT-AC-TTGTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATTGTTATTTTTT-CCAGT-ATTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--T--AGCGTGAAAAAAA--TAATTCC-ACAGTTAT-ATA-GGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : CAAACCACAGTCAG---------GACC--CT------G----AATTT--CTATCAATAAG-CCGT-AAATTGTGT--G-GT--A----AAAGTGATCTGTATA------C-----CCC--CTC---TA-T----AT-TA-TAGA-------------------GGGGGTGTACAT--A-CAT-AG-CA-CCCTTAC-----------TA-------t
gi|6 : aaacattcgcaaaacatgctgcaA--------GGTC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAA--TTGC----GT--GG--T-AAGGG---TG-ATA------TGTACACCC-CCTC---TA-TT---ATATAGTA-AG------------------GGTGCT----AT--G-TAT-GTACA-CCCtataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagg----AATTT--CTATCAATACG-CCGT-AAAT-ATGT--G-GT---------AGGG---TG-ATA------TGTATACCC-TCTC---TA---TATATATA-TACACGTGTATTTTATATATAGAGAGGGT----AT--A-CAT-AT-CA--CCTTACCACATATATTTTA-------CGGTTATT-G-A---------T-------------------------A-----------G-----------------AG------------A-AATTCAGAGGCCTG-
gi|8 : CC-TCT------G----AATTT---TATCAATATG-CCGTGAAA--ATGT----GT--AGTATAAAGGG---TG-ATA------C-----------------A-TGTAGA----------------------------GGGGGT----AT--A-TAT-GT-CA-TCCTTAC-----------TACGTGCACATTTTACG-GCT---------T-------------------------ATTGG-------T-----------------AG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT------G----AATAT--CTATCAATACG-CCAC-AAG--ATGT----GT--AG--T--AGG-----G-ATA-------------------A---TA-GTTATATA-G-TAGA-------------------GGGGAT----GT--G-C---AT-CA-CCCTTCC-----------TA-------t
blockSeqs : A A . T A . AA . T . . T . . C CCT . A ATAGT . A G A . . A . . . . TC T GGGA A . C T A A TTTG . . . . . . . G A . . C . . C G . . . C C . G . C . . . . . A G A . A . . . A A . T GAT TAGAT A . A C . A CAT T G A AT T TA A AG A TC T C . . A CA C T GCTACTAAC C . CCCG TC C G ATACATGGTTTAGCG GATCT T TTATATTCCCT GTA ATT T C G G CGTGTATTTTATATATAGA A GTAC TT T . A A C CACATATATTTTACG CACATTTTTTATTCATGCTTTATTGATATAAAGAG . . TCA G CC T G C A A TG C G C T TTCATTAT G CC T TT TA . TC A . GCTT T G T A T T C . C C . T A GT CA T G T . AT A CC . . T . T CC GTT T T G . A . . TA A A G A T T . A TT A A G T A . T A A GA AA A T . T A A ATAC G . A CA A AT C A T A A AGA T C AA . A . GTG A G C A TATCAG A . C . G G C G C C G T G . T C G A A . . TTTC T TG T AAC A T T T . . G A A . A A GTA AA GA G A T T A . TC C AT . AGTTAT G . C C T A T . C G C . CTT G C C . . A
blockSeqs : A C . . . T G G A . . A A A C . C . . . AA . . A . . CCAG . C . AATCATGTAGCA GT . TGTACACCCC . GT A C . C C G . . . . . . A TACGTGCACAT AAACAATTTTTAATTCATGGGCTTAATTGATAA . . . . . T G C A A . C G C T ATC G . T T TC . T A . . . . T A T . . . . . . T . . . . G T . T A C . . . . T A T T T . . A . . . . A G A T T . T T . . G T A . T A A G A T . . . A . A . . A AA . . C . . A A G T . . . . . . A G . A TACCA A . C . . G C C . . . T G . . . G A A . . CC T . T . A T T . . . . . . . T A . A . . A . . . . TC . . . AA G . . . G A . . C G . . T . C . . . A
blockSeqs : A . . . . . . . . . . . . . . C . . . . . . A . . . . C . ATGTGTAGTATA GT . TGTATACCCT . TA A C . C C C . . . . . . A GTAA ACACATTTTTTATTCATGGCTTATTGATATT . . . . . . . . A . . . . . . T G . . T G . C . . . . . . . T . . . . . . . . . . . . . . T . . . . . . . . . T . . . A . . . . . . . A . . . . . . . . . . . A . A A A . . . . . . . . . A . . . . . . . G . . . . . . . . . . . TA . . . . . . . G . . . . . . . . . A . . . T . . . . A T . . . . . . . . . . . . . . . . . . . T . . . AT . . . . . . . . . . . . T . . . . . A
blockSeqs : . . . A . . . . C . AACATGTAGCA GT . CCCCCT . TT A C . C C G . . . . . . A AAA GCTTATTGGTAG . . . . . .
blockSeqs : . A . . . . . . TTGTGTGGTAA GT . CCCCCT . TT A T . G G G . . . . . . A TAA GATAGAG .
blockSeqs : A . . . . . . ATGTGTAGTA GT . CCCCT . TT T T . C . A . . . . . . A
blockSeqs : A . . . . . . ATGGGTAGC G . CCCC . TG G T . G . . . . . . . . C
blockSeqs : . . . . . . . TTATGTGGT C . A . GT T . . . . . . . . . . . .
blockSeqs : . . . . . . . TTGCGTGGT C . C . T . . . . . . . . . . . .
blockSeqs : . . . . . . ATGTGTAGT G . . . . . . .
blockSeqs : . . . . . . TATGTGGT . .
blockSeqs : . .
blockSeqCons : A* ****** **** ATGTGTAGTA********** CCCCCT*********** TACGTGCACA************ A*
originalCons : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAAAC-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAA--ATGC--G-GT--AG--CAAAGGG---CG-ATA------C-----CCC-TCTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTAC-----------TA-------AAGTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
finalCons : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCAA-C-ACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAAATGTGTAGTA----------AAGGG---CG-ATACCCCCT-----------CTC---TA-TTTAAATACA-TACAC------------------GGGGGT----AT--A-CAT-AT-CA-CCCTTACTACGTGCACA------------GTTACT-ACA---------C-------------------------A-----------T-----------------AG------------A-AATTCAGAGGCCTG-A---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--ACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGT--T-GATAAA-CTACACATCTTTGATGGTAACATG-ATTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAA-CGACTCCAGAATCGTC-TGT-----TTATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAAT-AATTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTAT-TTTTTATAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATC-AATTT--AAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCC-GGGTTTTTTCACTATTATAAA---G-AGGCATTTCTG-ACTAGANA-TT---AA-TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--G-ATTGTAAGTGTTTG-C--TG--TTTTG-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAG-TCAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGAC-TTTGACAATG-CA-TA-ATGGACAAAGGGACTTT-AC-TTGTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGT-ATTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 1 222 1 1 222 1 222 1 22222 1 1 1 1 1 11 1 11 11 1 1 11 222222 11 1 1 1 333333 1 1 1 11 222 222 1 1 1 222 1 1 1 1 1 11 11 222 1 1 1 1 1 1 1 1 11 1 1 1 1 1 2222 1 1 1 1 1 1 222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 2222 1 1 111 11 1 11 11 11 1 1111 1 333 111111111 1111 111111111 1111 222222222 11111 333333333333333333333333333 1 111111111 888888888888888888888888888888888888888888888888888888888888888888888888888 222 1 11 1111 4444444444 11 1 11 1 1 2222 1 1 11 1 1 1 1 222222 1 11 11 1 11 1 1 11 1 11 1 1 22 111 1 1 1 1 2222 11 1 1 11 11 1 1 11 222 11 1 222 1 2222 1 11 111 1 11 1 1 11 1 1 11 11 1 1 111 1 33333333 11 11 1 1 222 1 11 1 1 1 1 1 1 1111 11 222 1 1 1 1 1 1 11 111 11 11 1 1 1 1 1 11111 1 11 1 3333333 1 1 1 2 1 1 1 1 1111 1
lowQualScore : 1 1 5 5 1 5 88 5 111 5 5 1 000 5 1 000 5 1 77777 5 5 5 5 5 88 5 88 88 5 5 88 1 999999 1 88 1 5 5 5 000000 5 5 5 88 111 111 5 1 5 5 111 5 5 5 5 5 88 88 000 1 1 5 5 5 5 5 5 5 5 88 5 5 5 5 5 3333 5 5 5 5 5 5 111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 77777 1 4444 3 2 0 0 777 3 2 7 22 0 33 3 33 3 22 7 2 0 7777 0 666 0 6 999999999 3 999999 6666 44 8 6 3 111111111 3 4444 000000000 7777 55555 5 666 3 1 5 111111111111111111111111111 2 8888 55 4 4 4 4 666666666 1 666666666666666666666666666666666666666666666666666666666666666666666666666 6 777 0 33 3 2 2 3 3 4444 2 2 2 3 1111111111 2 33 3 0 33 44 0 55 3 0 1111 0 0 3 3 33 0 0 5 0 888888 0 33 33 0 2 3 33 5 0 3 22 0 33 0 0 3 00 777 5 0 3 0 3 0 1111 33 0 3 2 3 1 3 0 9 33 33 0 0 2 3 3 33 3 3 777 33 1 0 777 3 5 0000 0 33 3 000 0 33 2 0 0 3 3 33 0 3 3 0 33 33 0 0 777 3 2 0 3 55555555 3 22 33 0 2 2 1 0 888 9 3 22 0 0 0 55 5 0 0 5555 3 33 3 999 3 3 3 0 0 0 0 0 0 33 9 3 777 33 33 0 3 5 0 5 0 77777 0 33 0 2222222 2 0 0 0 0 3 0 0 2 2 0 0 4444 0 2 8 8 8 88
lowQualScore : . . . . . . .. . ... . . . ... . . ... . . ..... . . . . . .. . .. .. . . .. . ...... . .. . . . . ...... . . . .. ... ... . . . . ... . . . . . .. .. ... . . . . . . . . . . .. . . . . . .... . . . . . . ... .............................................................................................................. ..... . .... . . . . ... . . . .. . .. . .. . .. . . . .... . ... . . ......... . ...... .... .. . . . ......... . .... ......... .... ..... . ... . . . ........................... . .... .. . . . . ......... . ........................................................................... . ... . .. . . . . . .... . . . . .......... . .. . . .. .. . .. . . .... . . . . .. . . . . ...... . .. .. . . . .. . . . .. . .. . . . .. ... . . . . . . .... .. . . . . . . . . .. .. . . . . . .. . . ... .. . . ... . . .... . .. . ... . .. . . . . . .. . . . . .. .. . . ... . . . . ........ . .. .. . . . . . ... . . .. . . . .. . . . .... . .. . ... . . . . . . . . . .. . . ... .. .. . . . . . . ..... . .. . ....... . . . . . . . . . . . . .... . . . . . ..
lowQualScore : 0 0 0 5 0 5 55 0 555 5 5 0 555 5 0 555 5 0 00000 5 5 0 5 0 00 5 55 55 5 0 00 0 555555 0 00 0 5 5 5 000000 0 0 0 00 555 000 0 0 5 5 000 0 0 0 0 0 00 55 000 0 0 5 0 5 0 5 5 0 5 00 5 0 5 0 5 5555 0 5 5 5 5 5 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 00000 0 0000 2 5 0 0 555 2 5 0 55 0 88 2 22 2 55 3 5 0 0000 6 444 8 7 444444444 3 666666 2222 22 8 7 3 333333333 3 3333 999999999 1111 11111 9 444 6 3 9 333333333333333333333333333 3 5555 55 0 0 0 0 000000000 8 222222222222222222222222222222222222222222222222222222222222222222222222222 7 555 0 88 2 5 5 2 2 8888 5 5 5 2 0000000000 5 88 2 0 88 00 0 88 2 0 2222 0 0 2 2 22 0 0 0 0 222222 0 88 88 0 5 2 88 5 0 2 55 0 88 0 0 2 88 000 5 0 5 0 2 0 2222 88 0 2 5 2 0 2 0 8 88 22 0 0 5 2 2 22 2 2 555 22 0 0 555 2 5 8888 0 88 2 222 0 88 5 0 0 2 2 88 0 2 2 0 88 88 0 0 555 2 5 0 2 88888888 2 55 88 0 5 5 0 0 888 0 2 55 0 0 0 00 5 0 0 0000 2 88 2 222 2 2 2 0 0 0 0 0 0 88 8 2 555 22 88 0 2 5 0 5 0 22222 0 88 0 2222222 5 0 0 0 0 2 0 0 5 5 0 0 8888 0 5 0 0 0 88
consensus : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCA-A-CACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAAA--T-----GT-GTAGTA--AAGGGCG------A----TACC----CCCTCTC---TA-TTTAAATACA-TACACG------------------GGGGT----AT--A-CATA-T-CA-CC---------CTTAC------TA--CGT----GC---A-----CG-GTTNTTA---CAT-----------A----TAG------------A-AATTCAGAGGCCTGA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--A-CCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGTT-G--ATAAAC-TACACATCTTTGATGGTAACATGA-TTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAAC-GACTCCAGAATCGTC-TGTTT-----ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAATAA-TTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTATNTTTTA-TAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATCAA-TTTAA--GCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCCGGG-TTTTTTCACTATTATAAAGG--AGGCATTTCTG-ACTAGANA-TTAA---TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GA-TTGTAAGTGTTTG-C--TGTTTT--G-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAGT-CAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGACTTT-GACAATG-CA-TA-ATGGACAAAGGGACTTT-ACTT-GTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGTA-TTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
Reference ( family-1310 ) : AATAAAATTCCNAAATCTTTGTNTTCTAGATATCTATANAGAATTTTTTTAAAAAACAAAGCTTAACATGATATGCAGAAAATAACATGTATGCANTAGCGAAACAAGTACACATGCATAANTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTAATGCTATCNAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTTTGCAATTAACTCCATATCAGGAGATAATAGATTCAATATGGCATCAAAGACAAAACTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCATTCCATTCAATACTTCNAATATATGGGATTANAAAATGTACATGTACATTAATTTACTTTTTATCATTNCTTAGGTGCCAGTGGCTGTCGGGTGTCGCACGTTTTCCATCAATCCTAAAACAAGTCTTTTTGAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGGACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGGGATGAAAAGTCTTGTTCAAGGGGGGAATTTGGACAAACNTGGGTGGAAATCAGCTTACATGTACTACACCATCACCAGTCAGGCTGGTTTCACTCTGAATGACTACACGACCAACCACTCCCATCACTGCAACAGGGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTNCCCTTTATNTTTGACCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGGCCCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAACATATAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATGCTCGTTACTTTTTTTTCTTAACGTCTGCAAATATGTATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTCCTAAGTACATTGTACATGATTCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACTTAGATACTGAACTGTAGATATNAAGATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGCCTTCAAG-GGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCA-A-CACAG-CAGA--------GGCC-TCT------G----AATTT--CTATCAATAAGCCCGT-AAAA--T-----GT-GTAGTA--AAGGGCG------A----TACC----CCCTCTC---TA-TTTAAATACA-TACACG------------------GGGGT----AT--A-CATA-T-CA-CC---------CTTAC------TA--CGT----GC---A-----CA-GTTACTA---CAC-----------A----TAG------------A-AATTCAGAGGCCTGA---GCTGTG-TTTAAAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--A-CCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCAGTC--GATCGTTGGTGTT-G--ATAAAC-TACACATCTTTGATGGTAACATGA-TTTT----CTCACT-GAA-ACTTTAAAACATT-GGCTG-AAAAC-GACTCCAGAATCGTC-TGTTT-----ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTTTCG--CTAATAA-TTAGAACTTCGATCCC-GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCTN-TTAGGTTTGAT--TATATATGATATTTTGA-TAGCCTATTTTTTA-TAAAATGAAAATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTNTATCAA-TTTAA--GCACAATTATCA-TTTTAAAAACGAAATTC-AATATCTCT-AGATTTTACATTTTCCCGGG-TTTTTTCACTATTATAAAG---AGGCATTTCTG-ACTAGANA-TTAA---TTTACAACA---ACTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GA-TTGTAAGTGTTTG-C--TGTTTT--G-AGAAAAAT-GGTTT---TAAAAAAATTGAT-GTATTTTTCATAGAT--T--CA-TATGCATCTAATAAAGT-CAATGGTT--ACC-ATGGAAACATNTGAAA-TATTC--GTCGACTTT-GACAATG-CA-TA-ATGGACAAAGGGACTTT-ACTT-GTTA--TCGTGTATTT--TTGTTGA--AACACCAAATATTGGTA-TTTTT-CCAGTA-TTGA-TTT-TC-AAGTTATTGCC--TATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-ACG---AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TC-AATCCCTGACG-GT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|1 : AATAAAATTTCTAAATCTTTGTTTTCTAGATATC-ATACAGAATTTTTTTAAAA--CAAAGCTTAACATGATATGCAGAAAATAACATGTATGCAATAGCGAAACAAGTACACATGCATAAATTCCAGTGATC---GGATGCTAGCCCAGGTACATGTAATGCTATCTAAGCCCAGTAATTATAATCT-----TTATAGAGAAGATATGCAAGTTTGCAATTA-CTCCATATCAGGA-ATAAT-GATTCAATATGGCATCAAAGACAAA-CTCAAAAATATTAAAGTATTTTGAAATATATTTACAAAATAATATCAAATGGATTCAT--CATTCAATACTTTAAATATAT---ATTATAAAATGTACATGTACATTAATTTACTTTTTATCATTACTTAGGTGCCAGTGGCTGTCGAGTGTCGCACGTTT-CCATCAATCCTAAA-CA-GTCTT---GAAAAATTGCGGAAAAATGAAGCGGGTCAGTATGAACAGAGTTCCAGAACACTGGATCAATCGACCATGAGGAAAGGCCTATGGCATTGGAAGGAGATGAAAAGTCTTGTTCAAAGGGGGAATTTGGACAAACTTGGGTGG-AATCAGCTTACATGTACTACACCAT-ACCAGTCAGGCTGGTTTCACTCTGAATGACTACACAACCAACCACT-CCATCACTGCAACA-GGAAGAACTTGAAAAATCCAAAGGAACTGTCTCCATGTTCATCGCCATGTATCCTTTATATTTGACCCAGAATCA-GCAGCATATATGTCAGTTCCATGCATTTGTCTGATAACAATAGG-CCACATGTAGTTTCCAACTACAATAAGAGGACAAACATATGATTGATTTC-AGAA-GGAGTGGGATTTTAATTC-AAATAAACAT-TAAATGTGACTGAGATGGTATATAGGAAATTCAGTATTAAAAAGTATGTATGTACATACTCGTTATTTTTTTTTCTTAACGTCTGC-AATATGT-TTGAA
gi|1 : CCTACTCCTAAGTACAT-GTACAT---TCTATGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGTACACTGTAGGTTAATATAGGATGTTCACT-----ACTGAACTGTAGATATTAAGATTAAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|1 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatGAGAGAG-GCCTTCAAGTGGACAGGGGGTT-CA---TTTTTTTCTCTGAGGGAAAATGTCTATTTTCT-GTCTAGTAT--ACACATGATA-GACCTAAGCCC-CTCTGCTAAACTTCTCTGAAGC-TGGTAAATTTATTTTAAACCA-AGCACAG-CAGT--------GGCC-TCTTCCCAGGT---AATTT--CTATCGATAAGCCCGT-AAAA--T-----ACAGTAGCA--AAGGGCG------A----TACC----CC-TCTC---TA-TTTAAATACA-TACACG------------------CGGAT----AT--A-CATAAT-CA-CC---------CTT-C------TA--------------A------A-GTTACTA---CAC-----------A----TAG------------ACAATTCAGAGGCCTGAA--GCTGTG-TTTAAAA--AATTGAACTCCGGTGGGGTCCTAA--GTGGACCCT--AACCTTGTTTACCTGGAGCTTTCA--T-------GTGAATTCA-TC--GATCGTTGGTGTT-GTGATAAACCTACACATCTTTGATGTAAACATGAATTTT----CTCACT-GAA-ACATTAAAACAT--GGCTG-AAAACCGACTCCAGAATCGTC-TGTTTCTGTTATCTG-CA--CATTCACGCCAGCGGTG--GGTAAAATT-GGGTTTCGGCCTAATAAATTAGAACTTCGATCCC-GATCTAAATATACGTCCGAAAACTCTT-ATATTTACCTT-TTAAGTTTGAT--TATATCTGATATTT-GA-TAGCCTACATTTTAATAAAATGAAA-TAAATCTTAATATTATTC--CAT-GTACTAAATTGATTAAAGTTGTATCAAATCTAAAAGCACAATTATCA-TTTTAAAAACGAAATTC-AATATTACT-AGATTTTACATTTTCCCGGGGTTTTTTC-CTATTATAAAAGGAAGGCATTTCTG--CTAGATA-TTAAAAATTTACAACA---ACTTTT-GAAAAGGTGAAAAATGATAAGTAC-AA--CACC-CCC-TTTTTGTGTTAGAATATCCATTGC--GAATTGTAATTGTT-G-C--TGTTTTTTG-AGAAAAATCGGTTT---TAAAAAAATTGAT-GTATTTTTCATAGATACT--CA-TATGCATCTAATAAAGTTCAATGGCTTAACC-ATGGAAACATCTGAAA-TATTCTGGTCAACTTTTGACAATGTCG-TA-ATG-ACAA-GGGACCTTGACTTTGTTA--TTGTGTATTT--TTGTTGA--AACACCA--TAT-GGTA-TTTTTGCCAGTAATTGA-TTT-TC-AAGTTATTGCCCTTATTTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAGTTA-ACAATATCTCTGCATGTGATGCAACTCAAG-GTGAAAAAAA--TAATACCAACG---ATAACAGAGTTCCATATG-TATAG-TGGTAAAGTA-TATATAAGTATCGAC-TCAAATCCCTGACG-GTCCGA--TCGT-GCCACCCTTTG-CATGAATTCTTAACGTGGAACAGGCACTTAAgaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagagaggccttcaagtggacagggggttcatttttttctctgagggaaaatgtctattttctgtctagtatacacatgatagacctaagcccctctgctaaacttctctgaagctggtaaatttattttaaaccaagcacagcagtggcctcttcccaggtaatttctatcgataagcccgtaaaatacagtagcaaagggcgatacccctctctatttaaatacatacacgcggatatacataatcacccttctaaagttactacacatagacaattcagaggcctgaagctgtgtttaaaaaattgaactccggtggggtcctaagtggaccctaaccttgtttacctggagctttcatgtgaattcatcgatcgttggtgttgtgataaacctacacatctttgatgtaaacatgaattttctcactgaaacattaaaacatggctgaaaaccgactccagaatcgtctgtttctgttatctgcacattcacgccagcggtgggtaaaattgggtttcggcctaataaattagaacttcgatcccgatctaaatatacgtccgaaaactcttatatttaccttttaagtttgattatatctgatatttgatagcctacattttaataaaatgaaataaatcttaatattattccatgtactaaattgattaaagttgtatcaaatctaaaagcacaattatcattttaaaaacgaaattcaatattactagattttacattttcccggggttttttcctattataaaaggaaggcatttctgctagatattaaaaatttacaacaacttttgaaaaggtgaaaaatgataagtacaacaccccctttttgtgttagaatatccattgcgaattgtaattgttgctgttttttgagaaaaatcggttttaaaaaaattgatgtatttttcatagatactcatatgcatctaataaagttcaatggcttaaccatggaaacatctgaaatattctggtcaacttttgacaatgtcgtaatgacaagggaccttgactttgttattgtgtatttttgttgaaacaccatatggtatttttgccagtaattgattttcaagttattgcccttatttttgtacccattttttgttgaattctggggaaatctatttttagttaacaatatctctgcatgtgatgcaactcaaggtgaaaaaaataataccaacgataacagagttccatatgtatagtggtaaagtatatataagtatcgactcaaatccctgacggtccgatcgtgccaccctttgcatgaattcttaacgtggaacaggcacttaaat
gi|10 : aataaaatttctaaatctttgttttctagatatcatacagaatttttttaaaacaaagcttaacatgatatgcagaaaataacatgtatgcaatagcgaaacaagtacacatgcataaattccagtgatcggatgctagcccaggtacatgtaatgctatctaagcccagtaattataatctttatagagaagatatgcaagtttgcaattactccatatcaggaataatgattcaatatggcatcaaagacaaactcaaaaatattaaagtattttgaaatatatttacaaaataatatcaaatggattcatcattcaatactttaaatatatattataaaatgtacatgtacattaatttactttttatcattacttaggtgccagtggctgtcgagtgtcgcacgtttccatcaatcctaaacagtcttgaaaaattgcggaaaaatgaagcgggtcagtatgaacagagttccagaacactggatcaatcgaccatgaggaaaggcctatggcattggaaggagatgaaaagtcttgttcaaagggggaatttggacaaacttgggtggaatcagcttacatgtactacaccataccagtcaggctggtttcactctgaatgactacacaaccaaccactccatcactgcaacaggaagaacttgaaaaatccaaaggaactgtctccatgttcatcgccatgtatcctttatatttgacccagaatcagcagcatatatgtcagttccatgcatttgtctgataacaataggccacatgtagtttccaactacaataagaggacaaacatatgattgatttcagaaggagtgggattttaattcaaataaacattaaatgtgactgagatggtatataggaaattcagtattaaaaagtatgtatgtacatactcgttatttttttttcttaacgtctgcaatatgtttgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctactcctaagtacatgtacattctatgcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgagtacactgtaggttaatataggatgttcactactgaactgtagatattaagattaaggggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGAGAGAGCCTTCTAG-GGACAGAGGGTT-TA---CATTTTTCTCC--GGGAAAATGTTTA-TTTCT-TTCTAGTATTAAAACATGATAGGACCTAAGCCCTCTCTat
gi|11 : C-TAT------G----AATAT--CTATCAATACGCC-AC-AAGA--T-----GT-GTAGTA-----GG-G------A----TAA---------------TA-GTTATATA-G-TAGA-G------------------GGGAT----GT--G-CATA-T-CA-CC---------CTTCC------TA--CAT----GT---A-----CA-G
gi|12 : A--------GGCC-TCT------G----AATTT--CTATCAATAAGCCATG-AAAA--T-----GG-GTAGC---AAGGGTGATATT-A----TATT----CCCTCTCGTATA-TATAAATACA-TAct
gi|13 : A--------GGCC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAAT--T-----AT-GTGGT---AAGGGTG------A----gt
gi|15 : atTTTG--ATG-ATTCTT-ACGTGGAACA-GCACTTAA
gi|16 : G-CACA--------GGCC-TCT------G----AATTT--CTATCAATAAGtacc
gi|2 : AATAAAATTCTAAAATCTTTGTATT-TAGATATTTATAAAGA-TTTTTTTAAAAAACAAAG-TTAAC-T-ATATGCAGAAA-TA-CATGTATGCATT---GAAACAAGT-CACATGCATAACTTCCAGTGATCCCTGGATGCTAGCCCAGGTACATGTA-TGCTATTAAAGCCCAGTAATTATAATCTATAGTTTATAGAGAAGATATGCAAGTT-GCAATTAACTCCATATCAGGAGATAATAGATTCAATATG-CA--AAAGACAAAACTCAAA--TATTAAAGT--TTTGAAATAT-TTTACAAAATAATAT-AAATGGATTCATTCCATTCAATACTTCTAATATATGGGA--AAAAAATGTACATGTACATTAATTTA--TTTTATCATTCCTTAGGTGCCAGTGGCTGTCAGGTGTCACATGTTTTCCATCAATCCTAAAACAAGTCTTTTTG--AAATTGC-GAAAAATGAAGTGGGTCAGTATGAACAGAGTTCCAAGACACTGGATCAATC-ACCATGAGGAAA-GCCTATGGCATTGGA--GGGATG---AGTCTTGTTCAAGGGGG---TTT-GACAAACGTAGGTGGAAATCAGC-TACAT---CTACACCATCACCAGTCAGGCT-GTTTTACTCTGAATGACTACACGACCAA-CACTCCCATCACTGCAACAGGGAAGA--TTG--AAATCCAAAGGAACTGTCTCCATGTTCAT---CATGTCCTCTTTATCTTTG-CCCAGAATCAGGCAGCATATATGTCAGTTCCATGCATTTG-CTGATAACAATAGGCCCACATG-AG-TTCCAACTACAATAAGA-GAC-AACATATGAT--ATTTCAAGAAGGGAGTGGGATTTTAATTCAAAATAAA-ATATAAATG----TGAGAT-GTATATAGGAAATTCAGTATT-AAAAGTATGTATGTACATGCTCGTTACTTTTTTTTTTTAACGTCTGCAAATATGTATTGAAa
gi|2 : tCCTACTCCT-AGTACATTGTACATGATTCTATGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|2 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGGATGTTCACTTAGATACTGAACTGTAGATATAAA----AAGGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttaggatgttcacttagatactgaactgtagatataaaaagggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|3 : taataaaattctaaaatctttgtatttagatatttataaagatttttttaaaaaacaaagttaactatatgcagaaatacatgtatgcattgaaacaagtcacatgcataacttccagtgatccctggatgctagcccaggtacatgtatgctattaaagcccagtaattataatctatagtttatagagaagatatgcaagttgcaattaactccatatcaggagataatagattcaatatgcaaaagacaaaactcaaatattaaagttttgaaatattttacaaaataatataaatggattcattccattcaatacttctaatatatgggaaaaaaatgtacatgtacattaatttattttatcattccttaggtgccagtggctgtcaggtgtcacatgttttccatcaatcctaaaacaagtctttttgaaattgcgaaaaatgaagtgggtcagtatgaacagagttccaagacactggatcaatcaccatgaggaaagcctatggcattggagggatgagtcttgttcaagggggtttgacaaacgtaggtggaaatcagctacatctacaccatcaccagtcaggctgttttactctgaatgactacacgaccaacactcccatcactgcaacagggaagattgaaatccaaaggaactgtctccatgttcatcatgtcctctttatctttgcccagaatcaggcagcatatatgtcagttccatgcatttgctgataacaataggcccacatgagttccaactacaataagagacaacatatgatatttcaagaagggagtgggattttaattcaaaataaaatataaatgtgagatgtatataggaaattcagtattaaaagtatgtatgtacatgctcgttactttttttttttaacgtctgcaaatatgtattgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctactcctagtacattgtacatgattctatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtAGAGAGAGCCTTCAAG-GGACAGGGGGGT-TACATTTTTTTTCTCTGAGGAAAAGTGTCTATTTTCTTGTCTAGTAT--AC-CATGAT--GACCTA-GCCC-CTCTGCTAAACTTCTCTGAAGCCTGG-AAATTTA----AAACCACA-CAC-G-CAGGCTACTAACGGCCCTCT------GCCCGGATTTTCCTATCAATAG---CGT-AAAAATC-----AT-GTAGCA--AAGG-CG------A----TACC----CCCTCTC---TA-TTCAAATACA--ACACG------------------GGA-T----AT--ATCATA-T-CA-ACTTAAAGTTACTCACATTTTTTATTCAT----GC---T-----TT-ATTGATA---TAA-----------A----GAG------------A-AATTCAGAGGC-TGA---GCTGTG-TTTAAAACCAATTGAACTCCGGTGGTGA-GAAATAGTGG--CCT--A-C-TTGTTTACCTG-AG-TTTCAATC-------GTGAATTCAGTCCCGATCGTTGGTGTT-G--ATAAAC-TACACAT-TTTGATGGTAAC-TGA-TTTTGCTTCTCCAT-GAAGACTTTCAA-CATT-GGCTGCAAAAC-GACTC-AGAATCGTCCTGTTT-----CTGCG-CA--TATTCACGCCAGCGGTG--GGTACAATTTGGGTTTCG--CCAATAA-TTAGAACTTCGATCCCCGATCTAAATATA-GTC--GAAATTCTTTAT-TTTACATCCTTAGGTATGAT---ATATATGATATTT-GA-TAGCCTATTTTTTA-TAGAATGAAAATAAAT-TTA----TATTT--AAT-GTACTAAATT-ATT-AAGTTTCA-CAA-TTAAA--GCCAAATTATCA-TTTATAAAATGAAATTCAAATATCTCT-A-ATTTT-CATTTTCCGGGT-TTTTTTCACTATTAT-AAG---AGGCATTTCTGAACTAGAAA-TTAA---TTT-TAACATACACTTTT-GAAA--GTGAAAAATGATCA-TAC-AAATCACCACCC-TTTTTGTGTTAGA--ATTCATTGCAGAA-TTGTAAGTG-TTG-C--TGTTTT--GAAGAAAAAT-GGTTT---TAAAAAATTT--T-GTATTTTTCATAGAT--T---A-TATGCTTCTAAT-AAGT--AATGGTT--ACCGAT-GAAACATGTGAAACTATTC--GTCGACTTT-GACAATG-CA-TACATGGACAAAGGGACTTT-ACTT-GTTATTTCGTGTATTTTGTTGTTG---AACACCAAATATTGG-A-TTTTT-CCCGTA-TTGA-TTT-CCAAAGTTATTGCC--TTATTTTGT-CCCATTTTTTG---TTG--ATTCTGG--GGAAGATCT-TATTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAAATTAATACC-ACA---A--ATAGGGTT-CATATGCTATAGCTGGTAACGTATTATAT-----TCGAC-TC-AATCC--GACG-GT-CGA--T-GTGGCCACCCTTTGCCATG-ATTCTT-ACGTGGAAC--GCACTTAAtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|4 : GAGAGAGC-TTCAAG-GGACAGGGGGTTACA---TTTTTT-CTCTGAGGGAAA-TGTCT--TTTCA-GTCTAGTAT--ACACATGGTA-GACCTAAGCCC--TCTGCTAAACT-CTCTGAAGCCTGG-AAATTTA----AA-CCA---CACAG-CAG---------GGCC-TCT------GCCAGGATTT--CTTTCAATAA-CCCGT-AAAAA-C-----AT-GTAGCA--AAGG-CG------A----TACC----CC-TCTC---TA-TTTAAATACA-TACACG------------------GGA-T----AT--A-CATA-T-CA-CC---------CTTAC------TA--AGTTACTAC---A-----CA-TTTTTTA---TTC-----------A----TGGCTTATTGATATTA-AATTCAGAGGCCTGA---GCTGTG-TTTATAA--AATTGAACTCCGGTGGTGACGAAATAGTGGACCCT--A-CCTTGTTTACCTGGAGCTT-CA--T-------GTGAATTCAGTC--GATCGTTGGTGTT-G--ATCAAC-TACACATCTTTGATGGTAACATGA-TTTT----CTCACT-GAA-ACTT-AAAACATT-GGCTG-AAAAC-GACTTCAGAATCGTC-TGTT------ATCTG-CA--CATTCACGCCAGCGGTG--GGTACAATT-GGGTT-CG--CTA-TAA-TTAGAACTTCGATCC--GATCTAAATATA-GTC--GAAACTCTT-AT-TTTACCT--TTAGGTTTGAT--TATATATGATATTTTGA-TCGCCTATTTTTTA-TAAAATGAATATAAAT-TTA----TATTT--CAT-GTACTAAATTGATTAAAGTTTTGTCAA-TT-AA--GCACAATTATCA--TTTAAAAACGAAATTC-AATATCTCTAAGATTTTACATTTTCCCGGG-TTTTTTCACTATTATAAAA---AGGCATTTCTG-ACTAGATA-TTAAT--TTTAC-ACA---CTTTTT-GAAA--GTGAAAAATGATAA-TAC-AA--CA-C-TCC-TTTTTGTGTTAGAATATCCATTGC--GA-TTGTAAGTGTTTGCC--TGTTTT--G-AGAAAAAT-GGTTT---T-AAAAAATTGAT-GTATTTTTCATAGAT--TACCA-TATGCATCTAATAAAGT-CAATGGTT--ACC-ATGGAAACATCTGAAA-TATT---GTC-ACTTT--ACAATG-CA-TA-ATGGACAAAGGGACTTG-ACTT-GTTA--T-GTGTA-TT--TTGTTG---AACACCAAATATTGGTA-TTTTC-CCAGTA-TTGA-TTT-TC-AAGTTATTGCC--TA-TTTTGTACCCATTTTTTG---TTG-AATTCTGG--GGAA-ATCTATTTTTAG-TA-AC-ATATCTCTGCATG-GATGCA--TC-AG-GTGAAAAAAA--TAATACC-AC----AT-ATAGGGTT-CATATG-TATAG-TGGTAAAGTA-TATATAAGTATGGAC-TC-AATCCCT-ACGCGT-CGA--T-GT-GCCACCCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTAt
gi|5 : TCTGAACCCTGG-AAATTTA----AA-CCA---CACAG-CAGA--------GGC--TCT------G---------------CAATAAGCCGTT-AAAA--TACATGGT-TTAGCG--AAGGG--------A----TACC----CCCTCTC---TAATTTAAATACA-TACACG------------------GAG-T----ATTTA-CATA-T-CAACC---------CTTACG-----TA--AGTC---ACTAAA-----CA-ATTTTTAATTCATGGGCTTAATTGA----TAA------------A-AATTCAGAGGCCTGATCAGCTGTGGTTTAAAA--AAT-GAACTCCGGTG-TGACGAAATAGTGGACCCCTGA-CCTTGTTTACCTGGAGCTTTCA--TTCATTATGTGAATTCAGCG--AATCGT-GGTGTTTG--A-GAAC-TACACA-CTTTGATGGTAACATGA-TTTT----CTCACTTGAA-ACTTTAAAACATTTGGTTG-AAAAC-GACTC-AGAATCGTC-TGGTT-----ATCTGACAGTTATGCACGCCAGCGGTGCAGGTACAATT-GG--TTCG--CTA-TAA-TTAGA-CTTCGATCCC-GATCTAAATATA-GTC--GAAATTCTT-AT-T--ACCTA-TTAGGTTTGATGTTTTATATGATATTTTGAGTAGCCTATGTTTTA-TAAAATGAAAATAAAT-TTA----TATTTTACATAGTACTAA---GATTAAAGTTATATCAA-TTTAA--GCACAATTATCATTTTTAAAATTGGAATTC-AACACTTCT-AGA-TTTACATTTTCCCGGG---GTTTCACTATTATAAAGA--AGGCATTTCTG-ACTAGAAATTTAT---TTTAC-AC----ACTTTTGGGAA--GTG-AAAATAAT-A-TGCAAA--CACC-CCCTTTTTTGTGTT--GATATCTATTAC--GA-TGTTAAGTGTTTG-CAATGTTTG--G-AGAAAATT-GGTTTGTGTAAAAAAATTGATCGT-TTTTTCATAGATTAT--CAGTGTGCATCTAATAAAGT-CAATGGTT--ACC-ATGGAAA-ATGTGAAA-TATT---GTC-AC-TT-GACAATG-CATTA-AT-GACAA--GGACTTT-ACTT-GTTA--CCGTGTATTT--TTG-TGAACAACACCAAATATTGTTATTTTTT-CCAGTA-TTGAGTTTATC-AAGTTATTGCG--TATTTTTGTACCCATTTTTTGGTATTGAAATTCTGGGAGAAA-ATCTATTTTTAGTTATACAGTATATCTGCATG-GATGCA--T--AGCGTGAAAAAAA--TAATTCC-ACAGTTAT-ATA-GGTT-CATATG-TATAG-TGGTAAAGTAGTAATTAAGTATCGACTTC-AATCGCTGACA-GT-CGACTT-GT-GCCA-CCTTTG-CATG-ATTCTT-ACGTGGAACA-GCACTTA
gi|6 : ----AAACCA-----CAGTCAG---------GACC--CT------G----AATTT--CTATCAATAAG-CCGT-AAAT--T-----GT-GTGGTA--AA-AGTGATCTGTA----TACC----CCCTCTA---TA-TT---ATAGA------G------------------GGGGTGTACAT--A-CATA-G-CA-CC---------CTTAC------TA--t
gi|6 : aaacattcgcaaaacatgctgcacA--------GGTC-TCT------G----AATTT--CTATCAATAAG-CCGT-AAAT--T-----GC-GTGGT---AAGGGTG------ATATGTACA----CCCCCTC---TA-TT---ATATAGTA-AGG------------------GTGCT----AT--G-TATG-TACA-CC---------Ctataatagagggggtgtacatacatagcacccttactatataatagagggggtgtacatatcacccttaccacgcaatttacggcttattgatagaaattcagagacct
gi|7 : aaacattcgcaaaacatgctgcacaaaccacagtcaggaccctgaatttctatcaataagccgtaaattgtgtggtaaaagtgatctgtataccccctctatattatagagggggtgtacatacatagcacccttactatataatagagg----AATTT--CTATCAATACGCC-GT-AAA---T-----AT-GTGGTA----GGGTG------A----TATGTATACCCTCTC---TA-TATA--TATA-TACACGTGTATTTTATATATAGAGAGGGT----AT--A-CATA-T-CA-CC----------TTAC------CA--CAT----AT---ATTTTACG-GTTATTG----AT-----------A----GAG------------A-AATTCAGAGGCCTG
gi|8 : CC-TCT------G----AATTT---TATCAATATGCC-GTGAAAA--T-----GT-GTAGTATAAAGGGTG------A----TAC----------------A-TGTAGA----------G------------------GGGGT----AT--A-TATG-T-CA-TC---------CTTAC------TA--CGT----GC---A-----CATTTTACGG---CTT-----------ATTGGTAG------------A-AATCCAGAGGCtg
gi|9 : A--------GGCC-TAT------G----AATAT--CTATCAATACG-CCAC-AAGA--T-----GT-GTAGT----AGG--G------A----TA------------A---TA-GTTATATA-G-TAGA-G------------------GGGAT----GT--G-C--A-T-CA-CC---------CTTCC------TA--CAT----GT---A-----CG-GTt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TAAAGATCTGACAGGACTTGTTGACACAATCAAACC