lowQualScore : 4 0 44 2 2 77 2
lowQualScore : . . .. . . .. .
lowQualScore : 9 7 77 7 7 66 7
consensus : GTCNCCGCCCTT-CG-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
Reference ( gi|112766 ) : GTCACCGCCCTT-TG-TCCAA-AT-GAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112768 : GTCACCGTCCCT-CG-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112769 : GTCATCGCCATT-CG-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAA
gi|112770 : GTCACCGCCCTT-CG-TCCAA-AT-AAATTAAGATACACCGCACTAAA-TATACAATAA
gi|112771 : GTCTCCGCCCTT-CG-TCCAA-AT-AAATCAAGATACACCGAAATATA-TATTTAATAACT
gi|112773 : GTCACCATTCTT-CG-TCCAA-AT-AAATCAAGATACATCAAAATAAA-TATACCATAACT
gi|112767 : GTCTCCACCCTT-CG-TCCGA-AT-AAATCAAGATACAACGGAATAAA-TATTCAATAACT
gi|112774 : GTCTCCGCCCTT-TG-TCCAA--T-AAATCAAGATACACCGAAATAAATTATA
gi|112776 : GTC-CCGCC-TT-CG-TCCAA-AT-AAATCA-GATAC-CCGAAA-AAA-TATACAATAACT
gi|112779 : GTCACCACCATT-CG-TCCAA-AT-GAAACAAGATGTACTAACATAAA-TGTACAATGATT
gi|112772 : GTCGCTGCCCTT-TG-TCCAA-AT-AAAGCAAAATCCACCAAAATAAA-
gi|112778 : GTCTCCGCCCTT-CGGTCCAATATTAAATCAAGATACACCAATATAAA-TATTCAA-AACT
gi|112777 : GTCTCCGCCCTTCTG-TCCAA--T-AAATCAAGATAC-CCGAAA--------ACAATAACT
gi|112775 : GTCACCGCC-TT-CG-TCCAA-AT-A-------------CGAAATAAA-TATACAATAACT
gi|112780 : TCAACACCCTT-CG-TCCAA-AT-AAATCAAGATACACCAAAATAAA-TATACAATAACT
gi|112781 : TT-TG-TCCTA-AT-AAATCAAGATACATCGAAATGAA-TTTACAATAACT
Alignments
lowQualScore : 3 2 2 2 2 2
lowQualScore : . . . . . .
lowQualScore : 6 5 5 5 5 5
consensus : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
Reference ( family-985 ) : GTCNCCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112766 : GTCACCGCCCTTT-G-TCCAA-AT-GAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112767 : GTCTCCACCCTTC-G-TCCGA-AT-AAATCAAGATACAACGGAATAAA-TATTCAATAACT
gi|112768 : GTCACCGTCCCTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112769 : GTCATCGCCATTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAA
gi|112770 : GTCACCGCCCTTC-G-TCCAA-AT-AAATTAAGATACACCGCACTAAA-TATACAATAA
gi|112771 : GTCTCCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATATA-TATTTAATAACT
gi|112772 : GTCGCTGCCCTTT-G-TCCAA-AT-AAAGCAAAATCCACCAAAATAAA-
gi|112773 : GTCACCATTCTTC-G-TCCAA-AT-AAATCAAGATACATCAAAATAAA-TATACCATAACT
gi|112774 : GTCTCCGCCCTTT-G-TCCAA--T-AAATCAAGATACACCGAAATAAATTATA
gi|112775 : GTCACCGCC-TTC-G-TCCAA-AT-A-------------CGAAATAAA-TATACAATAACT
gi|112776 : GTC-CCGCC-TTC-G-TCCAA-AT-AAATC-AGATAC-CCGAAA-AAA-TATACAATAACT
gi|112777 : GTCTCCGCCCTTCTG-TCCAA--T-AAATCAAGATAC-CCGAAA--------ACAATAACT
gi|112778 : GTCTCCGCCCTTC-GGTCCAATATTAAATCAAGATACACCAATATAAA-TATTCAA-AACT
gi|112779 : GTCACCACCATTC-G-TCCAA-AT-GAAACAAGATGTACTAACATAAA-TGTACAATGATT
gi|112780 : TCAACACCCTTC-G-TCCAA-AT-AAATCAAGATACACCAAAATAAA-TATACAATAACT
gi|112781 : TTT-G-TCCTA-AT-AAATCAAGATACATCGAAATGAA-TTTACAATAACT
Alignments
lowQualScore : 3 2 2 2 2 2
lowQualScore : . . . . . .
lowQualScore : 9 5 5 5 5 5
consensus : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
Reference ( family-985 ) : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112766 : GTCACCGCCCTTT-G-TCCAA-AT-GAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112767 : GTCTCCACCCTTC-G-TCCGA-AT-AAATCAAGATACAACGGAATAAA-TATTCAATAACT
gi|112768 : GTCACCGTCCCTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112769 : GTCATCGCCATTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAA
gi|112770 : GTCACCGCCCTTC-G-TCCAA-AT-AAATTAAGATACACCGCACTAAA-TATACAATAA
gi|112771 : GTCTCCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATATA-TATTTAATAACT
gi|112772 : GTCGCTGCCCTTT-G-TCCAA-AT-AAAGCAAAATCCACCAAAATAAA-
gi|112773 : GTCACCATTCTTC-G-TCCAA-AT-AAATCAAGATACATCAAAATAAA-TATACCATAACT
gi|112774 : GTCTCCGCCCTTT-G-TCCAA--T-AAATCAAGATACACCGAAATAAATTATA
gi|112775 : GTCACCGCC-TTC-G-TCCAA-AT-A-------------CGAAATAAA-TATACAATAACT
gi|112776 : GTC-CCGCC-TTC-G-TCCAA-AT-AAATC-AGATAC-CCGAAA-AAA-TATACAATAACT
gi|112777 : GTCTCCGCCCTTCTG-TCCAA--T-AAATCAAGATAC-CCGAAA--------ACAATAACT
gi|112778 : GTCTCCGCCCTTC-GGTCCAATATTAAATCAAGATACACCAATATAAA-TATTCAA-AACT
gi|112779 : GTCACCACCATTC-G-TCCAA-AT-GAAACAAGATGTACTAACATAAA-TGTACAATGATT
gi|112780 : TCAACACCCTTC-G-TCCAA-AT-AAATCAAGATACACCAAAATAAA-TATACAATAACT
gi|112781 : TTT-G-TCCTA-AT-AAATCAAGATACATCGAAATGAA-TTTACAATAACT
blockSeqs : T T G T T T
blockSeqs : A . . . . .
blockSeqs : A . . . . .
blockSeqs : A . . . . .
blockSeqs : T . . . . .
blockSeqs : G . . . . .
blockSeqs : A . . . . .
blockSeqs : T . . . . .
blockSeqs : A . . . . .
blockSeqs : T . . . . .
blockSeqs : T . . . . .
blockSeqs : A . . . . .
blockSeqs : A . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . .
blockSeqCons :
originalCons : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
finalCons : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
Alignments
lowQualScore : 3 2 2 2 2 2
lowQualScore : . . . . . .
lowQualScore : 9 5 5 5 5 5
consensus : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
Reference ( family-985 ) : GTCACCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112766 : GTCACCGCCCTTT-G-TCCAA-AT-GAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112767 : GTCTCCACCCTTC-G-TCCGA-AT-AAATCAAGATACAACGGAATAAA-TATTCAATAACT
gi|112768 : GTCACCGTCCCTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAACT
gi|112769 : GTCATCGCCATTC-G-TCCAA-AT-AAATCAAGATACACCGAAATAAA-TATACAATAA
gi|112770 : GTCACCGCCCTTC-G-TCCAA-AT-AAATTAAGATACACCGCACTAAA-TATACAATAA
gi|112771 : GTCTCCGCCCTTC-G-TCCAA-AT-AAATCAAGATACACCGAAATATA-TATTTAATAACT
gi|112772 : GTCGCTGCCCTTT-G-TCCAA-AT-AAAGCAAAATCCACCAAAATAAA-
gi|112773 : GTCACCATTCTTC-G-TCCAA-AT-AAATCAAGATACATCAAAATAAA-TATACCATAACT
gi|112774 : GTCTCCGCCCTTT-G-TCCAA--T-AAATCAAGATACACCGAAATAAATTATA
gi|112775 : GTCACCGCC-TTC-G-TCCAA-AT-A-------------CGAAATAAA-TATACAATAACT
gi|112776 : GTC-CCGCC-TTC-G-TCCAA-AT-AAATC-AGATAC-CCGAAA-AAA-TATACAATAACT
gi|112777 : GTCTCCGCCCTTCTG-TCCAA--T-AAATCAAGATAC-CCGAAA--------ACAATAACT
gi|112778 : GTCTCCGCCCTTC-GGTCCAATATTAAATCAAGATACACCAATATAAA-TATTCAA-AACT
gi|112779 : GTCACCACCATTC-G-TCCAA-AT-GAAACAAGATGTACTAACATAAA-TGTACAATGATT
gi|112780 : TCAACACCCTTC-G-TCCAA-AT-AAATCAAGATACACCAAAATAAA-TATACAATAACT
gi|112781 : TTT-G-TCCTA-AT-AAATCAAGATACATCGAAATGAA-TTTACAATAACT