lowQualScore : 111111111 1111
lowQualScore : 4444 2 444444444 88 22 7 0 9999 111 3333 555 333 2 2 888888 22 6666 22 2 2 55 2 2 2 5 2 2 2
lowQualScore : .... . ......... .. .. . . .... ... .... ... ... . . ...... .. .... .. . . .. . . . . . . .
lowQualScore : 2222 0 999999999 33 66 3 9 3333 888 7777 444 000 4 1 222222 99 7777 99 1 1 00 1 1 4 0 5 7 9
consensus : GACATGTC----TTA-GGA-----TG-GTCTTAGGAC--ATG-CCTAAG----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------GTCC--TANG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Reference ( gi|112844 ) : GACATGTC----TTA-GGA-----TG-GTCTTAGGAC--ATG-CTTAAG----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------GTCC--TATG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112842 : GACATGTC----TTA-GGA-----TG-ATCTTTGGAC--ATG-CTTAAG----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------GTCC--TATG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112845 : GACATGTC----TTA-GGA-----TG-GTCTTAGGAC--ATG-CTTAAG----T-C-A----T---AAGACA---TGTTTT-GGA-TTGA------GTCC--TAAG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATC
gi|112846 : GACATGTC----TTAAGGA-----TG-GTCTTAGGAC--ATG-CCTAAG----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------GTCCTATATG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATTT
gi|112843 : GACATGTC----TTA-GGA-----TG-GTCTTAGGAC--ATA-CTTAAG----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------GTCT--TAAA--T--T-A-AG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112847 : GACATGTC----TTA-GGA-----TG-GTCTTAGGAC--ATG-TTTAAT----T-C-A----T---AAGACA---TGTTCT-CGA--TGAC-----GTCC--TAAG--T--T-A-GG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112849 : GGCATATC----TTA-GTA-----TG-GTCTTAGGGC--ATG-CTTAAG----T-C-A----T---AAAGCA---TGTTTT-CTA-TTGA------GTTC--TAAG--T--T-A-AG--AT-TCGT-CTTAAGA-T-A-A-GA-TTCGGTCT
gi|112848 : GGCATGTC----TTA-GGA-----TG-GTATTTGGCC--ATG-CTTAAG----C-C-A----T---AAGACA---TGTTTT-CGA-TTGA------ATCC--TAAA--T--T-A-GG--AT-TCAT-CCTAA
gi|112850 : GATATGTC----TTA-GGAATGAGCG-GTCTTAGGAC--ATG-TTT----------------T---A-GACA---TGTTTT-CGA-TTGA------GTCC--TAAG--T--T-A-GGATAT-TCGC-CCTCAGA-T-A-A-GA-TTCCATCT
gi|112842 : ACATGTC----TTA-TGA----------CTTAAG-C--ATGTCCAAAGA---T-C-A----TCCTAAGACA---TGT
gi|112845 : gACATGTC----TTA-TGA----------CTTAAG-C--ATGTCCTAAGACCAT-C-C----T---AAGACA---TGTtttcgattgagtcctatgttaggattcgtcctaagataagattcaatct
gi|112846 : gACATGTC----TTA-TGA----------CTTAGG-C--ATGTCCTAAGA---C-C-ATCCTT---AAGACA---TGTtttggattgagtcctaagttaggattcgtcctaagataagattcaatc
gi|112843 : gACATGTC----TTA-TGA----------CTTAAG-T--ATGTCCTAAGACCAT-C-C----T---AAGACA---TGTtttcgattgagtcctatatgttaggattcgtcctaagataagattcaattt
gi|112852 : gACATGTC----TTA-TTA------G-GTCTTAG-AC--ATG-CTTA------T-C-A----T---AAGACA---TGTTTT-CGA-TTGA-------TCC--TAGA--T--T-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCTtttcgattgagtcttaaattaagattcatcctaagataagattcaatct
gi|112852 : ACATGTC----TTA-TGA-----TA------AG--C--ATG-TCTAAGACC-T-A-A----T---AAGACA---TGT
gi|112851 : ACATGTC----TTA-TTA------G-GTCTTAG-AC--ATG-CTTA------T-C-A----T---AAGACA---TGTTTT-CGA-TTGA-------TCC--TAGA--T--T-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCTtttcgattgatcctagattagaattcatctaagataaagattcaatct
gi|112851 : ACATGTC----TTA-TGA-----TA------AG--C--ATG-TCTAAGACC-T-A-A----T---AAGACA---TGT
gi|112853 : ATATGTCCTAGTTA-GAG-----TG-GTCTTACGTC--ACC-C-----------------------AGAAA---TGT----CGA-TTGA------GTCT--TGCG--T--T-A-GG--AT-TCGT-CCTAAGA-T-A-A-AA-CTGAATCtttcgattgatcctagattagaattcatctaagataaagattcaatct
gi|112854 : CGTGTC----T-A-GAA-----TG-GTCTTTGGGC--ATG-TTT-AG----T-----------------------TTTT-TGA-TTGA------ATTC--TAAG--T--TGA-GG--AGATCATGCCTAAGT-T-A-A-G
gi|112843 : TATC----TTA-GGA-----TGAATCTTA------AT---TTAAGAC--T-CAA----TCG-AAAACA---TGTCTTATGACTTAA------G-----TATG--TCCT-A-AG--A--CCAT-CCTAAGA-C-A-
gi|112855 : gacaGTT----TTA-GAA-----AGTGTCTTAGGAC-------------------------T---ACGACA---TGTTTT-GGA-TCGA------GTCC--TAAG--T--T-A-GG--AT-TTTT-CCTAAAA-T-A-A-GA-TTCAATCTagattcaatct
gi|112846 : TCTTAGGACGAAT--CCTAAC----A-T-A----T---AGGAC---------T-CAA-TCGAAAACATGTCT--TATGACT--T-A-GGC-AT---GT-CCTAAGA-
gi|112856 : gacatgtcttaaggatggG-CGTGAA----T-C-A----T---AAGACA---TGTTTT-CGA-TTGA------G-----------------------T-TCGT-CCTAAGA-T-ATATGA-TTCAATCTtaagattcaattt
gi|112857 : AAG----TTC-A----T---AAGACACCGTATTGT-CGA-TTGA------GTCC--TATG--T--T-ATGG--A--TCGT-CCTAAGATT-A-A-GACTCCGATCT
gi|112843 : GA-TTGA------ATCT--TATC--T--T-A-GG--AT-GAAT-CTTAATT-T-A-A-GA-CTCAATC
gi|112847 : gacatgtcttaggatggtcttaggacatacttaagtcataagacatgttttcGA-TTGA------ATCT--TATC--T--T-A-GG--AT-GAAT-CCTAAt
Alignments
lowQualScore : 6666 2 888888 2 5 333 2 444 2 33 1 2 2 33 2 2 2 5 2 2 2
lowQualScore : .... . ...... . . ... . ... . .. . . . .. . . . . . . .
lowQualScore : 1111 9 111111 9 1 111 5 444 5 44 9 5 5 44 5 5 7 3 7 7 9
consensus : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCC--TAAGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Reference ( family-984 ) : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCCTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCC--TANGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112842 : GACATGTC----TTA-GGA-----TG-ATCTTTGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCC--TATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112843 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATACTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCT--TAAATT-A-AG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112844 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCC--TATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112845 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTGGATTGA-GTCC--TAAGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATC
gi|112846 : GACATGTC----TTAAGGA-----TG-GTCTTAGGACATGCCTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTATATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATTT
gi|112847 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGTTTAATT-CATAAGACA---TGTTCTCGA-TGACGTCC--TAAGTT-A-GG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112848 : GGCATGTC----TTA-GGA-----TG-GTATTTGGCCATGCTTAAGC-CATAAGACA---TGTTTTCGATTGA-ATCC--TAAATT-A-GG--AT-TCAT-CCTAA
gi|112849 : GGCATATC----TTA-GTA-----TG-GTCTTAGGGCATGCTTAAGT-CATAAAGCA---TGTTTTCTATTGA-GTTC--TAAGTT-A-AG--AT-TCGT-CTTAAGA-T-A-A-GA-TTCGGTCT
gi|112850 : GATATGTC----TTA-GGAATGAGCG-GTCTTAGGACATGTTT-------TA-GACA---TGTTTTCGATTGA-GTCC--TAAGTT-A-GGATAT-TCGC-CCTCAGA-T-A-A-GA-TTCCATCT
gi|112851 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCC--TAGATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112852 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCC--TAGATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112853 : ATATGTCCTAGTTA-GAG-----TG-GTCTTACGTCAC-CC----------AGAAA---TG---TCGATTGA-GTCT--TGCGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-AA-CTGAATC
gi|112854 : CGTGTC----T-A-GAA-----TG-GTCTTTGGGCATGTTT-AGT---------------TTTTTGATTGA-ATTC--TAAGTTGA-GG--AGATCATGCCTAAGT-T-A-A-G
gi|112855 : GTT----TTA-GAA-----AGTGTCTTAGGAC-------------TACGACA---TGTTTTGGATCGA-GTCC--TAAGTT-A-GG--AT-TTTT-CCTAAAA-T-A-A-GA-TTCAATCT
gi|112856 : GCGTGAAT-CATAAGACA---TGTTTTCGATTGA-G-------------------T-TCGT-CCTAAGA-T-ATATGA-TTCAATCT
gi|112857 : AAGTTCATAAGACACCGTATTGTCGATTGA-GTCC--TATGTT-ATGG--A--TCGT-CCTAAGATT-A-A-GACTCCGATCT
Alignments
lowQualScore : 6666 2 888888 2 55 2 444 2 555 2 2 33 2 2 2 5 2 2 2
lowQualScore : .... . ...... . .. . ... . ... . . .. . . . . . . .
lowQualScore : 1111 9 111111 9 11 5 444 5 888 5 5 44 5 5 7 3 7 7 9
consensus : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Reference ( family-984 ) : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112842 : GACATGTC----TTA-GGA-----TG-ATCTTTGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112843 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATACTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCTTA-A-ATT-A-AG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112844 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112845 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTGGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATC
gi|112846 : GACATGTC----TTAAGGA-----TG-GTCTTAGGACATGCCTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTATATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATTT
gi|112847 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGTTTAATT-CATAAGACA---TGTTCTCGA-TGACGTCCTA-A-GTT-A-GG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112848 : GGCATGTC----TTA-GGA-----TG-GTATTTGGCCATGCTTAAGC-CATAAGACA---TGTTTTCGATTGA-ATCCTA-A-ATT-A-GG--AT-TCAT-CCTAA
gi|112849 : GGCATATC----TTA-GTA-----TG-GTCTTAGGGCATGCTTAAGT-CATAAAGCA---TGTTTTCTATTGA-GTTCTA-A-GTT-A-AG--AT-TCGT-CTTAAGA-T-A-A-GA-TTCGGTCT
gi|112850 : GATATGTC----TTA-GGAATGAGCG-GTCTTAGGACATGTTT-------TA-GACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GGATAT-TCGC-CCTCAGA-T-A-A-GA-TTCCATCT
gi|112851 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112852 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112853 : ATATGTCCTAGTTA-GAG-----TG-GTCTTACGTCACCC-----------AGAAA---TGT---CGATTGA-GTCTTG-C-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-AA-CTGAATC
gi|112854 : CGTGTC----T-A-GAA-----TG-GTCTTTGGGCATGTTTA-GT---------------TTTTTGATTGA-ATTCTA-A-GTTGA-GG--AGATCATGCCTAAGT-T-A-A-G
gi|112855 : GTT----TTA-GAA-----AGTGTCTTAGGAC-------------TACGACA---TGTTTTGGATCGA-GTCCTA-A-GTT-A-GG--AT-TTTT-CCTAAAA-T-A-A-GA-TTCAATCT
gi|112856 : GCGTGAAT-CATAAGACA---TGTTTTCGATTGA-G-------------------T-TCGT-CCTAAGA-T-ATATGA-TTCAATCT
gi|112857 : AAGTTCATAAGACACCGTATTGTCGATTGA-GTCCTA-T-GTT-ATGG--A--TCGT-CCTAAGATT-A-A-GACTCCGATCT
Alignments
lowQualScore : 6666 2 888888 2 55 2 444 2 555 2 2 33 2 2 2 5 2 2 2
lowQualScore : .... . ...... . .. . ... . ... . . .. . . . . . . .
lowQualScore : 1111 9 111111 9 11 5 444 5 888 5 5 44 5 5 7 3 7 7 9
consensus : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Reference ( family-984 ) : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112842 : GACATGTC----TTA-GGA-----TG-ATCTTTGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112843 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATACTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCTTA-A-ATT-A-AG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112844 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112845 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTGGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATC
gi|112846 : GACATGTC----TTAAGGA-----TG-GTCTTAGGACATGCCTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTATATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATTT
gi|112847 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGTTTAATT-CATAAGACA---TGTTCTCGA-TGACGTCCTA-A-GTT-A-GG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112848 : GGCATGTC----TTA-GGA-----TG-GTATTTGGCCATGCTTAAGC-CATAAGACA---TGTTTTCGATTGA-ATCCTA-A-ATT-A-GG--AT-TCAT-CCTAA
gi|112849 : GGCATATC----TTA-GTA-----TG-GTCTTAGGGCATGCTTAAGT-CATAAAGCA---TGTTTTCTATTGA-GTTCTA-A-GTT-A-AG--AT-TCGT-CTTAAGA-T-A-A-GA-TTCGGTCT
gi|112850 : GATATGTC----TTA-GGAATGAGCG-GTCTTAGGACATGTTT-------TA-GACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GGATAT-TCGC-CCTCAGA-T-A-A-GA-TTCCATCT
gi|112851 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112852 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112853 : ATATGTCCTAGTTA-GAG-----TG-GTCTTACGTCACCC-----------AGAAA---TGT---CGATTGA-GTCTTG-C-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-AA-CTGAATC
gi|112854 : CGTGTC----T-A-GAA-----TG-GTCTTTGGGCATGTTTA-GT---------------TTTTTGATTGA-ATTCTA-A-GTTGA-GG--AGATCATGCCTAAGT-T-A-A-G
gi|112855 : GTT----TTA-GAA-----AGTGTCTTAGGAC-------------TACGACA---TGTTTTGGATCGA-GTCCTA-A-GTT-A-GG--AT-TTTT-CCTAAAA-T-A-A-GA-TTCAATCT
gi|112856 : GCGTGAAT-CATAAGACA---TGTTTTCGATTGA-G-------------------T-TCGT-CCTAAGA-T-ATATGA-TTCAATCT
gi|112857 : AAGTTCATAAGACACCGTATTGTCGATTGA-GTCCTA-T-GTT-ATGG--A--TCGT-CCTAAGATT-A-A-GACTCCGATCT
blockSeqs : CTAG A ATGAGC T AG T CCG C TAT G T AT A G T A T T C
blockSeqs : . . T . AG . . . A . . . . . . A . . .
blockSeqs : . . T . AG . . . T . . . . . . . . . .
blockSeqs : . . T . AG . . . A . . . . . . . . . .
blockSeqs : . . T . AT . . . A . . . . . . . . . .
blockSeqs : . . T . AG . . . A . . . . . . . . . .
blockSeqs : . . T . AG . . . A . . . . . . . . . .
blockSeqs : . . T . AA . . . A . . . . . . . . . .
blockSeqs : . . T . AG . . . G . . . . . . . . . .
blockSeqs : . . T . G . . . G . . . . . . . . . .
blockSeqs : . . A . . . . . C . . . . . . . . . .
blockSeqs : . . . . . . . . A . . . . . . . . . .
blockSeqs : . . . . . . . . A . . . . . . . . . .
blockSeqs : . . . . T . . . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqCons :
originalCons : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
finalCons : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Alignments
lowQualScore : 6666 2 888888 2 55 2 444 2 555 2 2 33 2 2 2 5 2 2 2
lowQualScore : .... . ...... . .. . ... . ... . . .. . . . . . . .
lowQualScore : 1111 9 111111 9 11 5 444 5 888 5 5 44 5 5 7 3 7 7 9
consensus : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
Reference ( family-984 ) : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112842 : GACATGTC----TTA-GGA-----TG-ATCTTTGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112843 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATACTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCTTA-A-ATT-A-AG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112844 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTA-T-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112845 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGCTTAAGT-CATAAGACA---TGTTTTGGATTGA-GTCCTA-A-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATC
gi|112846 : GACATGTC----TTAAGGA-----TG-GTCTTAGGACATGCCTAAGT-CATAAGACA---TGTTTTCGATTGA-GTCCTATATGTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-GA-TTCAATTT
gi|112847 : GACATGTC----TTA-GGA-----TG-GTCTTAGGACATGTTTAATT-CATAAGACA---TGTTCTCGA-TGACGTCCTA-A-GTT-A-GG--AT-TCAT-CCTAAGA-T-A-A-GA-TTCAATCT
gi|112848 : GGCATGTC----TTA-GGA-----TG-GTATTTGGCCATGCTTAAGC-CATAAGACA---TGTTTTCGATTGA-ATCCTA-A-ATT-A-GG--AT-TCAT-CCTAA
gi|112849 : GGCATATC----TTA-GTA-----TG-GTCTTAGGGCATGCTTAAGT-CATAAAGCA---TGTTTTCTATTGA-GTTCTA-A-GTT-A-AG--AT-TCGT-CTTAAGA-T-A-A-GA-TTCGGTCT
gi|112850 : GATATGTC----TTA-GGAATGAGCG-GTCTTAGGACATGTTT-------TA-GACA---TGTTTTCGATTGA-GTCCTA-A-GTT-A-GGATAT-TCGC-CCTCAGA-T-A-A-GA-TTCCATCT
gi|112851 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112852 : ACATGTC----TTA-TTA------G-GTCTTAG-ACATGCTTA--T-CATAAGACA---TGTTTTCGATTGA--TCCTA-G-ATT-A-GA--AT-TCAT--CTAAGA-TAA-A-GA-TTCAATCT
gi|112853 : ATATGTCCTAGTTA-GAG-----TG-GTCTTACGTCACCC-----------AGAAA---TGT---CGATTGA-GTCTTG-C-GTT-A-GG--AT-TCGT-CCTAAGA-T-A-A-AA-CTGAATC
gi|112854 : CGTGTC----T-A-GAA-----TG-GTCTTTGGGCATGTTTA-GT---------------TTTTTGATTGA-ATTCTA-A-GTTGA-GG--AGATCATGCCTAAGT-T-A-A-G
gi|112855 : GTT----TTA-GAA-----AGTGTCTTAGGAC-------------TACGACA---TGTTTTGGATCGA-GTCCTA-A-GTT-A-GG--AT-TTTT-CCTAAAA-T-A-A-GA-TTCAATCT
gi|112856 : GCGTGAAT-CATAAGACA---TGTTTTCGATTGA-G-------------------T-TCGT-CCTAAGA-T-ATATGA-TTCAATCT
gi|112857 : AAGTTCATAAGACACCGTATTGTCGATTGA-GTCCTA-T-GTT-ATGG--A--TCGT-CCTAAGATT-A-A-GACTCCGATCT