lowQualScore : 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0
lowQualScore : . . . . . . . . . . . . . . .
lowQualScore : 4 8 4 6 4 4 0 4 4 4 4 4 8 2 4
consensus : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
Reference ( gi|38001 ) : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38023 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38018 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38017 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38016 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38014 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38012 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38011 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38004 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38002 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38000 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37998 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37995 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37994 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37991 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37990 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37989 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37986 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37980 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37979 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37978 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37977 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37975 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37972 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37971 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37970 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37969 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37968 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37966 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37965 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37963 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37962 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37960 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37959 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37958 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37957 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37955 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37953 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37952 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37951 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37949 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37948 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37947 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37934 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38007 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38003 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38008 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACTCG-CC-G-T-GAGCCC
gi|37976 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37919 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37918 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37917 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37916 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37915 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37912 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37907 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37906 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37933 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37895 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37894 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38022 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|37973 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|37903 : GTGCCATGG-A-GAG-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37982 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38021 : GTGCCATGG-A-G-G-A-GTAAA-CA-CCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37913 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37905 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37943 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-A-T-GAGCCC
gi|37896 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37892 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37932 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCC
gi|37891 : GTGCCATGG-AAG-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACACCCG-CC-G-T-GAGCCC
gi|37923 : GTGCCATGG-A-G-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37930 : GTGCCATGG-A-G-GGA-GTAAG-CA-TTCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37928 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-TC-G-T-GAGCCC
gi|37893 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|37936 : GTGTTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCC
gi|37900 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37899 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37898 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37897 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37944 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-TGGAGCC
gi|37922 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG--C-G-T-GAGCCC
gi|37901 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCAC-CC-G-T-GAGCCC
gi|37946 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACAACCGCCC-G-T-GAGCC
gi|37920 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTTACACCCA-CC-G-A-GAGCCC
gi|37921 : GTGCCATGGGA-G-G-A-GTAAG-CA-TCCTTCT-GCT-GA-CCGGTCACACCCG-CCGG-T-GAGCCC
gi|37890 : GTGCCATGG-A-G-G-A-GTAAG-CAATCCT-CT-GCT-GA-CGGGTCACA-CCG-CC-G-T-GAGCCC
gi|37927 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-TC-GCA-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37938 : GTGCCATGA-AAG-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTTACACCCG-CC-A-T-GAGCCC
gi|37926 : GTGCCATGG-A-G-G-A-GTAAG-CA-TTCT-CT-GCG-AA-CCGGTTACACCTG-CC-A-T-GAGCCC
gi|37904 : GTGCCATGG-A-G-G-A-GTAAGCCA-TCCT-CT-GCTGGA-CCGGT-ACA-CCG-CC-G-T-GAGCCC
gi|37889 : GTGCTATGG-A-G-G-A-GTAAA-CA-TCCT-TT-GCG-GA-CCGGTTACACCCG-CT-A-T-GAGCCC
gi|37937 : GTGCCATGG-G-A-G-A-GTAAG-CAATCCT-CT-GCA-GAACCGGTCACACCCG-CC-A-T-GAGCCC
gi|37931 : GTGCCATGG-A-G-G-AAGTAAG-CA-TCCT-CTTGCT-GA-CCGGTCACA-CCG-CC-G-T-TGACCC
gi|37888 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCC
gi|37887 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37886 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|38228 : TGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCCc
gi|38233 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|38234 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGATCACA-CCG-CCGG-T-GAGCC
Alignments
lowQualScore : 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0
lowQualScore : . . . . . . . . . . . . . . .
lowQualScore : 4 8 4 6 4 4 0 4 4 4 4 4 8 2 4
consensus : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
Reference ( family-92 ) : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37886 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCC
gi|37887 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37888 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37889 : GTGCTATGG-A-G-G-A-GTAAA-CA-TCCT-TT-GCG-GA-CCGGTTACACCCG-CT-A-T-GAGCCCc
gi|37890 : GTGCCATGG-A-G-G-A-GTAAG-CAATCCT-CT-GCT-GA-CGGGTCACA-CCG-CC-G-T-GAGCCC
gi|37891 : GTGCCATGG-AAG-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACACCCG-CC-G-T-GAGCCC
gi|37892 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37893 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|37894 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37895 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37896 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37897 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37898 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37899 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37900 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37901 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCAC-CC-G-T-GAGCCC
gi|37903 : GTGCCATGG-A-GAG-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37904 : GTGCCATGG-A-G-G-A-GTAAGCCA-TCCT-CT-GCTGGA-CCGGT-ACA-CCG-CC-G-T-GAGCCC
gi|37905 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37906 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37907 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37912 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37913 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37915 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37916 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37917 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37918 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37919 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37920 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTTACACCCA-CC-G-A-GAGCCC
gi|37921 : GTGCCATGGGA-G-G-A-GTAAG-CA-TCCTTCT-GCT-GA-CCGGTCACACCCG-CCGG-T-GAGCCC
gi|37922 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG--C-G-T-GAGCCC
gi|37923 : GTGCCATGG-A-G-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37926 : GTGCCATGG-A-G-G-A-GTAAG-CA-TTCT-CT-GCG-AA-CCGGTTACACCTG-CC-A-T-GAGCCC
gi|37927 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-TC-GCA-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37928 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-TC-G-T-GAGCCC
gi|37930 : GTGCCATGG-A-G-GGA-GTAAG-CA-TTCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37931 : GTGCCATGG-A-G-G-AAGTAAG-CA-TCCT-CTTGCT-GA-CCGGTCACA-CCG-CC-G-T-TGACCC
gi|37932 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCC
gi|37933 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37934 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37936 : GTGTTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCC
gi|37937 : GTGCCATGG-G-A-G-A-GTAAG-CAATCCT-CT-GCA-GAACCGGTCACACCCG-CC-A-T-GAGCCC
gi|37938 : GTGCCATGA-AAG-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTTACACCCG-CC-A-T-GAGCCC
gi|37943 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-A-T-GAGCCC
gi|37944 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-TGGAGCC
gi|37946 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACAACCGCCC-G-T-GAGCC
gi|37947 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37948 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37949 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37951 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37952 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37953 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37955 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37957 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37958 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37959 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37960 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37962 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37963 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37965 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37966 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37968 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37969 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37970 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37971 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37972 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37973 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|37975 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37976 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37977 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37978 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37979 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37980 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37982 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37986 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37989 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37990 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37991 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37994 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37995 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37998 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38000 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38001 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38002 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38003 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38004 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38007 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38008 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACTCG-CC-G-T-GAGCCC
gi|38011 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38012 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38014 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38016 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38017 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38018 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38021 : GTGCCATGG-A-G-G-A-GTAAA-CA-CCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38022 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|38023 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38228 : TGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|38233 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|38234 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGATCACA-CCG-CCGG-T-GAGCC
Alignments
lowQualScore : 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0
lowQualScore : . . . . . . . . . . . . . . .
lowQualScore : 4 8 4 6 4 4 0 4 4 4 4 4 8 2 4
consensus : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
Reference ( family-92 ) : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37886 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCC
gi|37887 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37888 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37889 : GTGCTATGG-A-G-G-A-GTAAA-CA-TCCT-TT-GCG-GA-CCGGTTACACCCG-CT-A-T-GAGCCCc
gi|37890 : GTGCCATGG-A-G-G-A-GTAAG-CAATCCT-CT-GCT-GA-CGGGTCACA-CCG-CC-G-T-GAGCCC
gi|37891 : GTGCCATGG-AAG-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACACCCG-CC-G-T-GAGCCC
gi|37892 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37893 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|37894 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37895 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37896 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37897 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37898 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37899 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37900 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37901 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCAC-CC-G-T-GAGCCC
gi|37903 : GTGCCATGG-A-GAG-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37904 : GTGCCATGG-A-G-G-A-GTAAGCCA-TCCT-CT-GCTGGA-CCGGT-ACA-CCG-CC-G-T-GAGCCC
gi|37905 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37906 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37907 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37912 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37913 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37915 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37916 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37917 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37918 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37919 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37920 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTTACACCCA-CC-G-A-GAGCCC
gi|37921 : GTGCCATGGGA-G-G-A-GTAAG-CA-TCCTTCT-GCT-GA-CCGGTCACACCCG-CCGG-T-GAGCCC
gi|37922 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG--C-G-T-GAGCCC
gi|37923 : GTGCCATGG-A-G-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37926 : GTGCCATGG-A-G-G-A-GTAAG-CA-TTCT-CT-GCG-AA-CCGGTTACACCTG-CC-A-T-GAGCCC
gi|37927 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-TC-GCA-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37928 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-TC-G-T-GAGCCC
gi|37930 : GTGCCATGG-A-G-GGA-GTAAG-CA-TTCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37931 : GTGCCATGG-A-G-G-AAGTAAG-CA-TCCT-CTTGCT-GA-CCGGTCACA-CCG-CC-G-T-TGACCC
gi|37932 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCC
gi|37933 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37934 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37936 : GTGTTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCC
gi|37937 : GTGCCATGG-G-A-G-A-GTAAG-CAATCCT-CT-GCA-GAACCGGTCACACCCG-CC-A-T-GAGCCC
gi|37938 : GTGCCATGA-AAG-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTTACACCCG-CC-A-T-GAGCCC
gi|37943 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-A-T-GAGCCC
gi|37944 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-TGGAGCC
gi|37946 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACAACCGCCC-G-T-GAGCC
gi|37947 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37948 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37949 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37951 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37952 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37953 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37955 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37957 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37958 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37959 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37960 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37962 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37963 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37965 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37966 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37968 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37969 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37970 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37971 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37972 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37973 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|37975 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37976 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37977 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37978 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37979 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37980 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37982 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37986 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37989 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37990 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37991 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37994 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37995 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37998 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38000 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38001 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38002 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38003 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38004 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38007 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38008 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACTCG-CC-G-T-GAGCCC
gi|38011 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38012 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38014 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38016 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38017 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38018 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38021 : GTGCCATGG-A-G-G-A-GTAAA-CA-CCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38022 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|38023 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38228 : TGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|38233 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|38234 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGATCACA-CCG-CCGG-T-GAGCC
blockSeqs : G A A
blockSeqs : G A A
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blockSeqCons :
originalCons : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
finalCons : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
Alignments
lowQualScore : 0 0 0 1 0 0 2 0 0 0 0 0 0 1 0
lowQualScore : . . . . . . . . . . . . . . .
lowQualScore : 4 8 4 6 4 4 0 4 4 4 4 4 8 2 4
consensus : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
Reference ( family-92 ) : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37886 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCC
gi|37887 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37888 : GTGCTATGG-A-G-GGA-GTAAA-CAATCCT-TT-GCG-GA-CCGGTTACA-CCG-CT-GAT-GAGCCCc
gi|37889 : GTGCTATGG-A-G-G-A-GTAAA-CA-TCCT-TT-GCG-GA-CCGGTTACACCCG-CT-A-T-GAGCCCc
gi|37890 : GTGCCATGG-A-G-G-A-GTAAG-CAATCCT-CT-GCT-GA-CGGGTCACA-CCG-CC-G-T-GAGCCC
gi|37891 : GTGCCATGG-AAG-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACACCCG-CC-G-T-GAGCCC
gi|37892 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37893 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|37894 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37895 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCG-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37896 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37897 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37898 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37899 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37900 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCA-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37901 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCAC-CC-G-T-GAGCCC
gi|37903 : GTGCCATGG-A-GAG-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37904 : GTGCCATGG-A-G-G-A-GTAAGCCA-TCCT-CT-GCTGGA-CCGGT-ACA-CCG-CC-G-T-GAGCCC
gi|37905 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37906 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37907 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37912 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37913 : GTGCTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37915 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37916 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|37917 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37918 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37919 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37920 : GTGCCATGG-A-G-G-A-GTAAA-CA-TCCT-CT-GCT-GA-CCGGTTACACCCA-CC-G-A-GAGCCC
gi|37921 : GTGCCATGGGA-G-G-A-GTAAG-CA-TCCTTCT-GCT-GA-CCGGTCACACCCG-CCGG-T-GAGCCC
gi|37922 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG--C-G-T-GAGCCC
gi|37923 : GTGCCATGG-A-G-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-T-GAGCCC
gi|37926 : GTGCCATGG-A-G-G-A-GTAAG-CA-TTCT-CT-GCG-AA-CCGGTTACACCTG-CC-A-T-GAGCCC
gi|37927 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-TC-GCA-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37928 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-TC-G-T-GAGCCC
gi|37930 : GTGCCATGG-A-G-GGA-GTAAG-CA-TTCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37931 : GTGCCATGG-A-G-G-AAGTAAG-CA-TCCT-CTTGCT-GA-CCGGTCACA-CCG-CC-G-T-TGACCC
gi|37932 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCC
gi|37933 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCC
gi|37934 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37936 : GTGTTATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCC
gi|37937 : GTGCCATGG-G-A-G-A-GTAAG-CAATCCT-CT-GCA-GAACCGGTCACACCCG-CC-A-T-GAGCCC
gi|37938 : GTGCCATGA-AAG-G-A-GTAAG-CA-CCCT-CT-GCT-GA-CCGGTTACACCCG-CC-A-T-GAGCCC
gi|37943 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-A-T-GAGCCC
gi|37944 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-G-TGGAGCC
gi|37946 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTTACAACCGCCC-G-T-GAGCC
gi|37947 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37948 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37949 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37951 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37952 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37953 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37955 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37957 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37958 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37959 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37960 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37962 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37963 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37965 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37966 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37968 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37969 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37970 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37971 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37972 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37973 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|37975 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37976 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACATCCG-CC-G-T-GAGCCC
gi|37977 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37978 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37979 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37980 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37982 : GTGCCATGG-A-G-G-A-GTAAG-CA-ACCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37986 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37989 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37990 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37991 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37994 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37995 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|37998 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38000 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38001 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38002 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38003 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38004 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38007 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCC-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38008 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACTCG-CC-G-T-GAGCCC
gi|38011 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38012 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38014 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38016 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38017 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38018 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38021 : GTGCCATGG-A-G-G-A-GTAAA-CA-CCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38022 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCAG-CC-G-T-GAGCCC
gi|38023 : GTGCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACACCCG-CC-G-T-GAGCCC
gi|38228 : TGCCATGG-A-G-G-A-GTAAG-CA-TCCT-TT-GCT-GA-CCGGTCACACCCG-CT-G-T-GAGCCC
gi|38233 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGGTCACA-CCG-CC-A-T-GAGCCC
gi|38234 : GCCATGG-A-G-G-A-GTAAG-CA-TCCT-CT-GCT-GA-CCGATCACA-CCG-CCGG-T-GAGCC