lowQualScore                  :       1111                                                                                          11111111           1111111111111111         1                                      111111                                                                  11         1111111111111         3               
lowQualScore                  :       9999        2      2 444 2     88     2    7  88888        2        666666 444   2  2   2 444 99999999   444   4 1111111111111111    33   7  2  444  4      2   33   2     4     888888  2 33  33    55         2  55555     444   66      2    33 8 2   77    2  2 4444444444444  2   2  1               
lowQualScore                  :       ....        .      . ... .     ..     .    .  .....        .        ...... ...   .  .   . ... ........   ...   . ................    ..   .  .  ...  .      .   ..   .     .     ......  . ..  ..    ..         .  .....     ...   ..      .    .. . .   ..    .  . .............  .   .  .               
lowQualScore                  :       8888        9      5 111 4     88     4    1  22222        4        888888 111   4  4   4 111 88888888   111   7 5555555555555555    22   0  4  111  7      4   22   4     7     111111  4 22  22    66         4  99999     111   55      2    11 4 2   88    2  2 7777777777777  4   4  4               
consensus                     :   AAAAAATCTTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----TTT---GAC-A------TA------T-TACT--TTTTTT-GG---TC-ACTAAA-TTG--GGT-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCTATAAATACA
Reference ( gi|85408 )        :   AAAATATATTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TT--C----TTT---GAC-A------TA------T-TACT--TTTATT-GG---TC-ACTAAA-TTG--GGT-GATTT-CAATTC---AATT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AGA-TTG-ATGAT-TG-A----A--------TA-GGT-GATTTTTCTATAAATACA
gi|85410                      :   AAAAAAT-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----TTT---GAC-A------TA--------TATT--TTTTTT-GG---TC-ACTAAA-TTG--GGT-GATTT-CAATTT----ACT-T--GA--CTTG--AATATTATA-CA-----AT-TG---TAT--TCAATA-TGTG--AAA-TTG-TTGAT-TG-A----ATCTACTATTA-GGT-GA-TTTTCTATAAATACA
gi|85412                      :   AAAAAATATTTGCTGG-GAAAAT-G---C-AAAAA--TTGAC-TTGG-AC-----TTTAAAAT-CAAATCCTTATCCTA---CAT-TG-TAT-C---TA--C----TAT---GAC-A------TA------T-TACT--TTTTTG-GG---TC-ACTAAA-TTG--GGT-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAGTG-TGTG--GAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCTACAGATGCA
gi|85415                      :   AAAAAATATTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGGAC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----TTT---GAC-A------TA------C-TACT--TTT-TT-GG---TC-ACTAAA-TTG--GGC-GATTT-CAATTT---ACTT-T--GA--CTTA--AGTATTACA-TA-----ATGTG---TAT--TCATTG-TGTG--AAA-CTG-TTGAT-TG-A----A--------TA-GGT-GGT
gi|85409                      :   AAAAAATCTTTGCAGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---GA--T----TTT---GAC-ATACCGGTA------T-TACT--TTTTTT-GG---TT-ACTAAA-ATG--GTC-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TATAGTCAGTG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCTATAAATACA
gi|85411                      :   AAAAAATCTTTGCTGG-GAAAAC-G---C-AAAAA--TTAAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----GTT---GACAA------AA------T-TACT--TGTTTT-GG---TC-ACTAAA-TTT--GGT-GATTT-CAATACTGTACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTA--AAACTTG-TTGAT-TG-A----A--------TA-GGG-GA-TTTTCTATAAATACA
gi|85413                      :   AAAAAATCTTTGCTGC-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----TT----GAC-A------T---------TACT--TTT-TT-GG---TC-ACTAAA-TTG--AGT-GATTT-TAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATT-TGTT--AAA-TTGTTTGATGTG-A----A--------TA--GT-GA-TTTTCTATAAATACA
gi|85416                      :   AAAAT-TCTTTGATGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-GAAATCCT------A---TAA-TG-TAT-T---CA--C----TTT---GAC-A------TA------T-TACT--TTTTTT-GG---TC-ACTAAA--TG--GGT-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATATG---TAT--TCAATG-TGT---AAA-TTG-TTGAT-TG-ATACCG--------TA-GGT-GA-TTTTCTA
gi|85422                      :  aAAAA-ATCTTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--C----TTT---G-C-A------TA------TATATA--TT--TT-GG---TCAACTAAA--TG--GGT-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----AT-TG---TAT--C--ATA-TGTG--AAA-TTG-TTGAT-TG-A----A--------T
gi|85418                      :   AAAAT-TCTTTGATGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGTAC-----TTGAA----TGAATCCT------A---TAACTG-TAT-C---TA--C-----TT---GAC--------TA------T-TACT--TTTTTT-GG---TC-ACTACG-TTG--GGT--ATTT-CAATTT-----CT-T--GA--C-TG--AAT-TTATA-C------ATATG---TAT--TTCATG-TG-G--TAA-TTG-TTGAT-TG-A----ATACTCG--TA-GGT-GA-TTTTCTA
gi|85419                      :  aAAAAT-CGTTTGCAGGTGAAAAC-G---CCAAAAA--TTGAC-TTGGTAC-----TTGAAATC-CAAATCCT------A---CAA-TGGTAT-CGGATT--------TT---GAC-A------TACCGGTAT-TAAT--TTT-TT-GG---TTTACTAAA-ATGTCG------TT-CAATTT---ACTTAT--GA--CTTGTGAATATTATATCA-----ATGTGGTTTATAGTCAGTGGTGTG--A-A-TTG-TTGAT-TG-A----A--------TA-GGT-GATTTTTCTATTAATACA
gi|85421                      : aaAAAAAGTCCTTACTGG-GAAAGC-G---C-AGAAA--TTGAC-CTGG-ACAAGACTTGGAAAT-TAAATCCT------A---CAA-TG-TGT---------------TT---GATTA------TA------A-TACT--TGTATT-G-----C-ATT----TT-----T-G--TT-CA-CTA---AATT-TTGGA--CTAG--AATATCATA-CA-----ATGTG---TAT--T----------------TTA-ATGAT-TG-A----G--------TA-GGA-GA-TTTTCAATAAATATA
gi|85420                      :   AAAACTTCTTTGCTGA-ATAAAT-G---C-AAAAAA-TTGACATTGG-ACA----TTGTTAATTCAAATCCC------AAGGCA--TG-TATTC---TA--C----GTTATGGAC-A-------A------T-TACTATTTTATTTGG---TC-ACTAAACTTG--GAT-GATTTACAA-TC---TACT-T--GACTCTCGC-AATAATATA-TATCACTATGTG---TAA--TCAATG-TGCGGAAAA-TCG-TTGAT-TGAA----A--------TATGGTGGATTTCCCTATAA
gi|85417                      :      aaATATTTGCTGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TGGAAAAT-CAAATCCT------A---CAT-TG-TAT-C---TT--A----TTT---GAA-A------TA------T-T-----TTTGGG-GGGTGTC-ACTAAA-TGG--GGT-GATTTTCAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--CCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCCATATATACA
gi|85423                      :            aacagGA-GGAAAT-GGATC-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG--GT-T---TTAAT----TTT---GAC-A------T--------------------T------TC-ACTAAA-TTG--AGTTAATTT-CAATTT---ATTT-T--GA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--GAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTTTCTA-AAATACA
gi|85424                      :                     AAAACTG---C-AAAAA--TTGAC-TTAA-TC-----TTGGAAAT-CAAATCCT------A---CAA-TG-TAT-C---TA--CGAACTTT---GAC-A------TA------T-TACT--TTTTTT-GG---TC-ACTAAA-TTG--GGT-GATTT-CAATTT---ACTT-T--GA--C--------ATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCTAT-AATACA
gi|85414                      :                          -G---C-AAAAA--TTGAG-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-AG-TAT-G---TA--C----TTT---GAC-A------TA------T-TACT--TTTTTT-GG---TC-ACTAAA-TTG--GAT-GATTT-CAATTT---ACTT-T--GA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTTTCTATTAATAC
gi|85425                      :                 aaaaaatcttt---C-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-TTT-T---TA--A----TTT---GAC-A------T--------------------T------TC-ACTAAA-TTG--AGT-AATTT-CAATTT---ATTT-T--GA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--AAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTTTCTAAAAATACA
gi|85426                      :                                                                                                                                                                                                                                                  -TGTG--AAA-TTA-TTGAT-TG-A----A--------TG-GGT-GA-TTTTCTATAAATACA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                  11111111                          
lowQualScore                  :       33  2        2      2 333 2     88     2    6  77777        2        666666 333   2  2   2  2 2 4444   333   4 999999  7777    33 88888888  0    666666  4      2   33   2     4    33 2     2   33    55         2  55555     333   66      2    22   2   2     2  2 4444 33333333  2   2  4   2            
lowQualScore                  :       ..  .        .      . ... .     ..     .    .  .....        .        ...... ...   .  .   .  . . ....   ...   . ......  ....    .. ........  .    ......  .      .   ..   .     .    .. .     .   ..    ..         .  .....     ...   ..      .    ..   .   .     .  . .... ........  .   .  .   .            
lowQualScore                  :       77  7        5      4 999 2     33     2    7  88888        2        444444 999   2  2   2  2 2 7777   999   4 444444  8888    11 11111111  6    444444  4      2   11   2     4    11 2     2   11    33         2  66666     999   11      1    99   1   1     1  1 5555 77777777  2   2  4   4            
consensus                     : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
Reference ( family-863 )      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85408                      : AAAATA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-T-C----TTT---GAC-A------TAT---TACT--T--------TTATTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-CAATT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AGA-TTG-ATGAT-TG-A----A--------TA-GGT-GATTTT-TCTATAAATACA
gi|85409                      : AAAAAA--TC-TTTGCAGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CG-A-T----TTT---GAC-ATACCGGTAT---TACT--T--------TTTTTGG------TT-ACTAAA-ATG--GTC-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TATAGTCAGTG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85410                      : AAAAAA--T--TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TA----TATT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TAC-T-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--TCAATA-TGTG--AAA-TTG-TTGAT-TG-A----ATCTACTATTA-GGT-GA-TTT-TCTATAAATACA
gi|85411                      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTAAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----GTT---GACAA------AAT---TACT--T--------GTTTTGG------TC-ACTAAA-TTT--GGT-GATTT-CAATACTGTACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTA--AAACTTG-TTGAT-TG-A----A--------TA-GGG-GA-TTT-TCTATAAATACA
gi|85412                      : AAAAAA--TA-TTTGCTGG-GAAAAT-G---C-AAAAA--TTGAC-TTGG-AC-----TTTAAAAT-CAAATCCTTATCCTA---CAT-TG-TAT-CT-A-C----TAT---GAC-A------TAT---TACT--T--------TTTTGGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAGTG-TGTG--GAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTACAGATGCA
gi|85413                      : AAAAAA--TC-TTTGCTGC-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TT----GAC-A------T-----TACT--T--------TT-TTGG------TC-ACTAAA-TTG--AGT-GATTT-TAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATT-TGTT--AAA-TTGTTTGATGTG-A----A--------TA--GT-GA-TTT-TCTATAAATACA
gi|85414                      : AAAAAA--TC-TTTGC-----------------AAAAA--TTGAG-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-AG-TAT-GT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GAT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATTAATAC
gi|85415                      : AAAAAA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGGAC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAC---TACT--T--------TT-TTGG------TC-ACTAAA-TTG--GGC-GATTT-CAAT--T-TACTT-TGA--CTTA--AGTATTACA-TA-----ATGTG---TAT--TCATTG-TGTG--AAA-CTG-TTGAT-TG-A----A--------TA-GGT-GG-T
gi|85416                      : AAAAAT--TC-TTTGATGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-GAAATCCT------A---TAA-TG-TAT-TC-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATATG---TAT--TCAATG-TGT---AAA-TTG-TTGAT-TG-ATACCG--------TA-GGT-GA-TTT-TCTA
gi|85417                      : AACAGA--TA-TTTGCTGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TGGAAAAT-CAAATCCT------A---CAT-TG-TAT-CT-T-A----TTT---GAA-A------TAT---T----------------TTTGGGGGGTGTC-ACTAAA-TGG--GGT-GATTTTCAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--CCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCCATATATACA
gi|85418                      : AAAAAT--TC-TTTGATGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGTAC-----TTGAA----TGAATCCT------A---TAACTG-TAT-CT-A-C-----TT---GAC--------TAT---TACT--T--------TTTTTGG------TC-ACTACG-TTG--GGT--ATTT-CAAT--T-T--CT-TGA--C-TG--AAT-TTATA-C------ATATG---TAT--TTCATG-TG-G--TAA-TTG-TTGAT-TG-A----ATACTCG--TA-GGT-GA-TTT-TCTA
gi|85419                      : AAAAAA--TCGTTTGCAGGTGAAAAC-G---CCAAAAA--TTGAC-TTGGTAC-----TTGAAATC-CAAATCCT------A---CAA-TGGTAT-CGGA-T----TTT---GAC-A------TACCGGTATTAAT--------TTTTTGG------TTTACTAAA-ATGTCG------TT-CAAT--T-TACTTATGA--CTTGTGAATATTATATCA-----ATGTGGTTTATAGTCAGTGGTGTG--AA--TTG-TTGAT-TG-A----A--------TA-GGT-GATTTT-TCTATTAATACA
gi|85420                      : AAAAAACTTC-TTTGCTGA-ATAAAT-G---C-AAAAAA-TTGACATTGG-ACA----TTGTTAATTCAAATCCC------AAGGCA--TG-TATTCT-A-C----GTTATGGAC-AAT----TAC---TATT--T--------TATTTGG------TC-ACTAAACTTG--GAT-GATTTACAAT--C-TAC-T-TGACTCTCGC-AATAATATA-TATCACTATGTG---TAA--TCAATG-TGCGGAAAA-TCG-TTGAT-TGAA----A--------TATGGTGGA-TTTCCCTATAA
gi|85421                      : AAAAAG--TC-CTTACTGG-GAAAGC-G---C-AGAAA--TTGAC-CTGG-ACAAGACTTGGAAAT-TAAATCCT------A---CAA-TG-TGT------------TT---GATTA------TAA---TACT--TGTATTGCATTTTTGT------TC-ACTAAA-TT------------------------TT-GGA--CTAG--AATATCATA-CA-----ATGTG---TAT--T----------------TTA-ATGAT-TG-A----G--------TA-GGA-GA-TTT-TCAATAAATATA
gi|85422                      :  AAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---G-C-A------TATA--TA----T--------ATTTTGG------TCAACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--C--ATA-TGTG--AAA-TTG-TTGAT-TG-A----A--------T
gi|85423                      :                  GA-GGAAAT-GGATC-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-GTT-TT-AAT----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGTTAATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--GAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTA-AAATACA
gi|85424                      :                      AAAACTG---C-AAAAA--TTGAC-TTAA-TC-----TTGGAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-CGAACTTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--C--------ATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTAT-AATACA
gi|85425                      :                             ---C-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-TTT-TT-A-A----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGT-AATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--AAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTAAAAATACA
gi|85426                      :                                                                                                                                                                                                                                                    -TGTG--AAA-TTA-TTGAT-TG-A----A--------TG-GGT-GA-TTT-TCTATAAATACA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                  11111111                          
lowQualScore                  :       33  2        2      2 333 2     88     2    6  77777        2        666666 333   2  2   2  2 2 4444   333   4 999999  7777    33 88888888  0    666666  4      2   33   2     4    33 2     2   33    55         2  55555     333   66      2    22   2   2     2  2 4444 33333333  2   2  4   2            
lowQualScore                  :       ..  .        .      . ... .     ..     .    .  .....        .        ...... ...   .  .   .  . . ....   ...   . ......  ....    .. ........  .    ......  .      .   ..   .     .    .. .     .   ..    ..         .  .....     ...   ..      .    ..   .   .     .  . .... ........  .   .  .   .            
lowQualScore                  :       77  7        5      4 999 2     33     2    7  88888        2        444444 999   2  2   2  2 2 7777   999   4 444444  8888    11 11111111  6    444444  4      2   11   2     4    11 2     2   11    33         2  66666     999   11      1    99   1   1     1  1 5555 77777777  2   2  4   4            
consensus                     : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
Reference ( family-863 )      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85408                      : AAAATA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-T-C----TTT---GAC-A------TAT---TACT--T--------TTATTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-CAATT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AGA-TTG-ATGAT-TG-A----A--------TA-GGT-GATTTT-TCTATAAATACA
gi|85409                      : AAAAAA--TC-TTTGCAGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CG-A-T----TTT---GAC-ATACCGGTAT---TACT--T--------TTTTTGG------TT-ACTAAA-ATG--GTC-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TATAGTCAGTG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85410                      : AAAAAA--T--TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TA----TATT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TAC-T-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--TCAATA-TGTG--AAA-TTG-TTGAT-TG-A----ATCTACTATTA-GGT-GA-TTT-TCTATAAATACA
gi|85411                      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTAAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----GTT---GACAA------AAT---TACT--T--------GTTTTGG------TC-ACTAAA-TTT--GGT-GATTT-CAATACTGTACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTA--AAACTTG-TTGAT-TG-A----A--------TA-GGG-GA-TTT-TCTATAAATACA
gi|85412                      : AAAAAA--TA-TTTGCTGG-GAAAAT-G---C-AAAAA--TTGAC-TTGG-AC-----TTTAAAAT-CAAATCCTTATCCTA---CAT-TG-TAT-CT-A-C----TAT---GAC-A------TAT---TACT--T--------TTTTGGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAGTG-TGTG--GAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTACAGATGCA
gi|85413                      : AAAAAA--TC-TTTGCTGC-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TT----GAC-A------T-----TACT--T--------TT-TTGG------TC-ACTAAA-TTG--AGT-GATTT-TAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATT-TGTT--AAA-TTGTTTGATGTG-A----A--------TA--GT-GA-TTT-TCTATAAATACA
gi|85414                      : AAAAAA--TC-TTTGC-----------------AAAAA--TTGAG-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-AG-TAT-GT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GAT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATTAATAC
gi|85415                      : AAAAAA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGGAC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAC---TACT--T--------TT-TTGG------TC-ACTAAA-TTG--GGC-GATTT-CAAT--T-TACTT-TGA--CTTA--AGTATTACA-TA-----ATGTG---TAT--TCATTG-TGTG--AAA-CTG-TTGAT-TG-A----A--------TA-GGT-GG-T
gi|85416                      : AAAAAT--TC-TTTGATGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-GAAATCCT------A---TAA-TG-TAT-TC-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATATG---TAT--TCAATG-TGT---AAA-TTG-TTGAT-TG-ATACCG--------TA-GGT-GA-TTT-TCTA
gi|85417                      : AACAGA--TA-TTTGCTGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TGGAAAAT-CAAATCCT------A---CAT-TG-TAT-CT-T-A----TTT---GAA-A------TAT---T----------------TTTGGGGGGTGTC-ACTAAA-TGG--GGT-GATTTTCAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--CCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCCATATATACA
gi|85418                      : AAAAAT--TC-TTTGATGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGTAC-----TTGAA----TGAATCCT------A---TAACTG-TAT-CT-A-C-----TT---GAC--------TAT---TACT--T--------TTTTTGG------TC-ACTACG-TTG--GGT--ATTT-CAAT--T-T--CT-TGA--C-TG--AAT-TTATA-C------ATATG---TAT--TTCATG-TG-G--TAA-TTG-TTGAT-TG-A----ATACTCG--TA-GGT-GA-TTT-TCTA
gi|85419                      : AAAAAA--TCGTTTGCAGGTGAAAAC-G---CCAAAAA--TTGAC-TTGGTAC-----TTGAAATC-CAAATCCT------A---CAA-TGGTAT-CGGA-T----TTT---GAC-A------TACCGGTATTAAT--------TTTTTGG------TTTACTAAA-ATGTCG------TT-CAAT--T-TACTTATGA--CTTGTGAATATTATATCA-----ATGTGGTTTATAGTCAGTGGTGTG--AA--TTG-TTGAT-TG-A----A--------TA-GGT-GATTTT-TCTATTAATACA
gi|85420                      : AAAAAACTTC-TTTGCTGA-ATAAAT-G---C-AAAAAA-TTGACATTGG-ACA----TTGTTAATTCAAATCCC------AAGGCA--TG-TATTCT-A-C----GTTATGGAC-AAT----TAC---TATT--T--------TATTTGG------TC-ACTAAACTTG--GAT-GATTTACAAT--C-TAC-T-TGACTCTCGC-AATAATATA-TATCACTATGTG---TAA--TCAATG-TGCGGAAAA-TCG-TTGAT-TGAA----A--------TATGGTGGA-TTTCCCTATAA
gi|85421                      : AAAAAG--TC-CTTACTGG-GAAAGC-G---C-AGAAA--TTGAC-CTGG-ACAAGACTTGGAAAT-TAAATCCT------A---CAA-TG-TGT------------TT---GATTA------TAA---TACT--TGTATTGCATTTTTGT------TC-ACTAAA-TT------------------------TT-GGA--CTAG--AATATCATA-CA-----ATGTG---TAT--T----------------TTA-ATGAT-TG-A----G--------TA-GGA-GA-TTT-TCAATAAATATA
gi|85422                      :  AAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---G-C-A------TATA--TA----T--------ATTTTGG------TCAACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--C--ATA-TGTG--AAA-TTG-TTGAT-TG-A----A--------T
gi|85423                      :                  GA-GGAAAT-GGATC-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-GTT-TT-AAT----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGTTAATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--GAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTA-AAATACA
gi|85424                      :                      AAAACTG---C-AAAAA--TTGAC-TTAA-TC-----TTGGAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-CGAACTTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--C--------ATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTAT-AATACA
gi|85425                      :                             ---C-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-TTT-TT-A-A----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGT-AATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--AAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTAAAAATACA
gi|85426                      :                                                                                                                                                                                                                                                    -TGTG--AAA-TTA-TTGAT-TG-A----A--------TG-GGT-GA-TTT-TCTATAAATACA


blockSeqs                     :       CT  G        T      T GAT C     CA     A    G  AAGAC        T        TATCCT AGG   C  G   T  G A GAAC   ATG   A TACCGG  CCGG    AA GTATTGCA       GGGGTG  T      C   TC   T     T    AC G     A   CT    TG         T  TCACT     GTT   AG      G    GA   C   T     G  A TACC TCTACTAT  T   G  T   C
blockSeqs                     :       .   .        .      . .   .     CA     .    T  A            .        .      .     .  .   .  . . .      .     T AT      TA      .  .              .       A      .   .    .     A    .  .     .   .     C          .  .         .     AG      .    .    .   .     .  . .    TACTCG    .   .  .   .
blockSeqs                     :       .   .        .      . .   .     A      .    T  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       C       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       C       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       A       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       T       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :       .   .        .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       .       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :                    .      . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       .       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :                           . .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       .       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .   .
blockSeqs                     :                             .   .     .      .    .  .            .        .      .     .  .   .  . . .      .     . .       .       .  .              .       .      .   .    .     .    .  .     .   .     .          .  .         .     .       .    .    .   .     .  . .    .         .   .  .    
blockSeqs                     :                                                                                                                                                                                                                                                    .    .    .   .     .  . .    .                     


blockSeqCons                  : 
originalCons                  : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
finalCons                     : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                  11111111                          
lowQualScore                  :       33  2        2      2 333 2     88     2    6  77777        2        666666 333   2  2   2  2 2 4444   333   4 999999  7777    33 88888888  0    666666  4      2   33   2     4    33 2     2   33    55         2  55555     333   66      2    22   2   2     2  2 4444 33333333  2   2  4   2            
lowQualScore                  :       ..  .        .      . ... .     ..     .    .  .....        .        ...... ...   .  .   .  . . ....   ...   . ......  ....    .. ........  .    ......  .      .   ..   .     .    .. .     .   ..    ..         .  .....     ...   ..      .    ..   .   .     .  . .... ........  .   .  .   .            
lowQualScore                  :       77  7        5      4 999 2     33     2    7  88888        2        444444 999   2  2   2  2 2 7777   999   4 444444  8888    11 11111111  6    444444  4      2   11   2     4    11 2     2   11    33         2  66666     999   11      1    99   1   1     1  1 5555 77777777  2   2  4   4            
consensus                     : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
Reference ( family-863 )      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85408                      : AAAATA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-T-C----TTT---GAC-A------TAT---TACT--T--------TTATTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-CAATT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AGA-TTG-ATGAT-TG-A----A--------TA-GGT-GATTTT-TCTATAAATACA
gi|85409                      : AAAAAA--TC-TTTGCAGG-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CG-A-T----TTT---GAC-ATACCGGTAT---TACT--T--------TTTTTGG------TT-ACTAAA-ATG--GTC-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TATAGTCAGTG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATAAATACA
gi|85410                      : AAAAAA--T--TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TA----TATT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TAC-T-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--TCAATA-TGTG--AAA-TTG-TTGAT-TG-A----ATCTACTATTA-GGT-GA-TTT-TCTATAAATACA
gi|85411                      : AAAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTAAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----GTT---GACAA------AAT---TACT--T--------GTTTTGG------TC-ACTAAA-TTT--GGT-GATTT-CAATACTGTACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTA--AAACTTG-TTGAT-TG-A----A--------TA-GGG-GA-TTT-TCTATAAATACA
gi|85412                      : AAAAAA--TA-TTTGCTGG-GAAAAT-G---C-AAAAA--TTGAC-TTGG-AC-----TTTAAAAT-CAAATCCTTATCCTA---CAT-TG-TAT-CT-A-C----TAT---GAC-A------TAT---TACT--T--------TTTTGGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAGTG-TGTG--GAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTACAGATGCA
gi|85413                      : AAAAAA--TC-TTTGCTGC-GAAAAC-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TT----GAC-A------T-----TACT--T--------TT-TTGG------TC-ACTAAA-TTG--AGT-GATTT-TAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATT-TGTT--AAA-TTGTTTGATGTG-A----A--------TA--GT-GA-TTT-TCTATAAATACA
gi|85414                      : AAAAAA--TC-TTTGC-----------------AAAAA--TTGAG-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-AG-TAT-GT-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GAT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTATTAATAC
gi|85415                      : AAAAAA--TA-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGGAC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---GAC-A------TAC---TACT--T--------TT-TTGG------TC-ACTAAA-TTG--GGC-GATTT-CAAT--T-TACTT-TGA--CTTA--AGTATTACA-TA-----ATGTG---TAT--TCATTG-TGTG--AAA-CTG-TTGAT-TG-A----A--------TA-GGT-GG-T
gi|85416                      : AAAAAT--TC-TTTGATGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TTGAAAAT-GAAATCCT------A---TAA-TG-TAT-TC-A-C----TTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATATG---TAT--TCAATG-TGT---AAA-TTG-TTGAT-TG-ATACCG--------TA-GGT-GA-TTT-TCTA
gi|85417                      : AACAGA--TA-TTTGCTGG-GAAA-C-G---C-AAAAA--TTGAC-TTGG-AC-----TGGAAAAT-CAAATCCT------A---CAT-TG-TAT-CT-T-A----TTT---GAA-A------TAT---T----------------TTTGGGGGGTGTC-ACTAAA-TGG--GGT-GATTTTCAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----ATGTG---TAT--CCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCCATATATACA
gi|85418                      : AAAAAT--TC-TTTGATGG-GAAAAC-G---C-AAAAA--TTGAC-TTGGTAC-----TTGAA----TGAATCCT------A---TAACTG-TAT-CT-A-C-----TT---GAC--------TAT---TACT--T--------TTTTTGG------TC-ACTACG-TTG--GGT--ATTT-CAAT--T-T--CT-TGA--C-TG--AAT-TTATA-C------ATATG---TAT--TTCATG-TG-G--TAA-TTG-TTGAT-TG-A----ATACTCG--TA-GGT-GA-TTT-TCTA
gi|85419                      : AAAAAA--TCGTTTGCAGGTGAAAAC-G---CCAAAAA--TTGAC-TTGGTAC-----TTGAAATC-CAAATCCT------A---CAA-TGGTAT-CGGA-T----TTT---GAC-A------TACCGGTATTAAT--------TTTTTGG------TTTACTAAA-ATGTCG------TT-CAAT--T-TACTTATGA--CTTGTGAATATTATATCA-----ATGTGGTTTATAGTCAGTGGTGTG--AA--TTG-TTGAT-TG-A----A--------TA-GGT-GATTTT-TCTATTAATACA
gi|85420                      : AAAAAACTTC-TTTGCTGA-ATAAAT-G---C-AAAAAA-TTGACATTGG-ACA----TTGTTAATTCAAATCCC------AAGGCA--TG-TATTCT-A-C----GTTATGGAC-AAT----TAC---TATT--T--------TATTTGG------TC-ACTAAACTTG--GAT-GATTTACAAT--C-TAC-T-TGACTCTCGC-AATAATATA-TATCACTATGTG---TAA--TCAATG-TGCGGAAAA-TCG-TTGAT-TGAA----A--------TATGGTGGA-TTTCCCTATAA
gi|85421                      : AAAAAG--TC-CTTACTGG-GAAAGC-G---C-AGAAA--TTGAC-CTGG-ACAAGACTTGGAAAT-TAAATCCT------A---CAA-TG-TGT------------TT---GATTA------TAA---TACT--TGTATTGCATTTTTGT------TC-ACTAAA-TT------------------------TT-GGA--CTAG--AATATCATA-CA-----ATGTG---TAT--T----------------TTA-ATGAT-TG-A----G--------TA-GGA-GA-TTT-TCAATAAATATA
gi|85422                      :  AAAAA--TC-TTTGCTGG-GAAAAC-G---C-AAAAA--TTGAT-TTGG-AC-----TTGAAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-C----TTT---G-C-A------TATA--TA----T--------ATTTTGG------TCAACTAAA--TG--GGT-GATTT-CAAT--T-TACTT-TGA--CTTG--AATATTATA-CA-----AT-TG---TAT--C--ATA-TGTG--AAA-TTG-TTGAT-TG-A----A--------T
gi|85423                      :                  GA-GGAAAT-GGATC-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-GTT-TT-AAT----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGTTAATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--GAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTA-AAATACA
gi|85424                      :                      AAAACTG---C-AAAAA--TTGAC-TTAA-TC-----TTGGAAAT-CAAATCCT------A---CAA-TG-TAT-CT-A-CGAACTTT---GAC-A------TAT---TACT--T--------TTTTTGG------TC-ACTAAA-TTG--GGT-GATTT-CAAT--T-TACTT-TGA--C--------ATTATA-CA-----ATGTG---TAT--TCAATG-TGTG--AAA-TTG-TTGAT-TG-A----A--------TA-GGT-GA-TTT-TCTAT-AATACA
gi|85425                      :                             ---C-AAAGACATTTAC-TTGG-AC-----GTAAAAAT-C-----CT------A---CAA-TG-TTT-TT-A-A----TTT---GAC-A------T------------------------T--------TC-ACTAAA-TTG--AGT-AATTT-CAAT--T-TATTT-TGA--CTTG--AATACCATA-CA-----ATGTG---TAT--TTAGTA-TTTG--AAA-TTG-TTGAT-CG-A----T--------TA-GGT-GA-TTT-TCTAAAAATACA
gi|85426                      :                                                                                                                                                                                                                                                    -TGTG--AAA-TTA-TTGAT-TG-A----A--------TG-GGT-GA-TTT-TCTATAAATACA