lowQualScore                  :                                                1111111111111111                                                                             
lowQualScore                  :      55  44    3   5   777      8  8888888 33  3333333333333333 33333 1   2 1 1   1 11  1 1 1  1 1 1     1  2  1 2222   11   44 1 1  1      
lowQualScore                  :      ..  ..    .   .   ...      .  ....... ..  ................ ..... .   . . .   . ..  . . .  . . .     .  .  . ....   ..   .. . .  .      
lowQualScore                  :      00  22    1   7   999      0  7777777 77  2222222222222222 88888 4   9 1 1   1 44  0 0 0  0 0 0     3  0  4 9999   99   99 4 4  5      
consensus                     :  TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAA-AACTT-T----CAG--GGA-NT-T-CG-TGAAAT
Reference ( gi|14082 )        :  TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAA-AACTT-T----TAG--GGA-AT-T-CG-TGAAAT
gi|14075                      :  TGTA--TA--TGTT-ACA-GTA---CGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAA-AACTT-T----CAG--GGA-AT-T-CG-TGAAAT
gi|14076                      : aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-T--GC-G-A-AA-T-C-CCTGA-AACTT-TCTAGTAG--GGG-AT-C-C
gi|14077                      : aTATAATTA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-ATTTT-C--GCGG-A-AA-T-C-CCTAA-AACTT-T----CAG--GGA-AT-a
gi|14078                      : aTATA--TA--T-TT-ACA-GTA---AGATTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-TCAGC-G-AGAA-T-C-CCTAACAACTT-T----CAG--GGA-AT-T-CG-TGGAAatatg
gi|14080                      : aTATG--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGC-G-A-TTT-------------------CTAA-AACTT-T----CAG--GGA-AT-T-CG-TGAAAT
gi|14081                      : aTATA--AA--TGTT-AAA-GTA---AGACTGATG-------T--AA----------------TAACGGT-AGGAG-A-TTT-C--GC-G-A-AA-T----CTAA-AACTT-T----CAG--GGATAA-T-CG-TGAAAT
gi|14083                      : aTATA--TACCTGT--ACATGTAT--ATAGCG-TG-------T--AA----------------C-----T-AGA-G-A-TT--C--GT-G-A-AA-T-C-CCT-A-AACTT-T----C-G--GGA-AT-T--G-TGAAAT
gi|14084                      :   ACA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAA-AACTT-T----CAG--GAA-AT-T-CA-TGAAAT
gi|14085                      :   ATA--TA--TGTT-AC--GTA---AGACTG-TG-------T--AA----------------C-----T-AAG-G-A-T---C--AC-G-A-AAAT-C-CCTAC-AAATT-T----CAG--GAA-AT-T-CG-TGAA
gi|14079                      :    TA--CA--TGT--ACATGTATATATACTG-TG-------T--AA----------------C-----T-AGA-G-A-TTT-C--GT-G-A-AA-T-C-CCTAA-AACTT-T----CAG--GGA-AT-T-CG-TGAAAT
gi|14086                      : atacA--TA--TGTTTACA-GTA---AGACTGATG-------TTTAA----------------C-----TTAGGTGCA-TTT-C--GC-G-A-AA-T-C-CCTGA-AACTT-T----CAGAAGGA-AT-T-CG-TGAAAT
gi|14087                      :          --TGTT-ACA-GTA---AAACTG-TG-------T--AA----------------C-----T-AGG-A-A-TTT-C--GC-G-A-AA-T-C-TCTAA-AACTT-T----CAA--GAA-AT-T-CG-TGAAAT
gi|14088                      :          --TGTT-ACA-ATA---AGACTGATGCAACTACT--AA----------------C-----T-AGG-G-A-TTT-C--AT-G-A-AA-T-C-CCTAA-AACTT-T----AAG--GGA-AT-T-C
gi|14089                      :                   A-GCA---AGATTG-TG-------T--AAAATGGAGGTGTCATTTC-----C-AGT-G-A-TTT-C--AC-G-A-AA-T-C-CCTAG-AGTTT-T----TAG--TGA-TT-T-CA-TGAAATa
gi|14090                      :                               TG-TG-------A--AA----------------C-------AGG-G-A-TTT-C--AT-G-A-AT-T-T-CCTGA-AAGTT-T----TAG--GGA-TT-T-CG-CGAAAT
gi|14089                      :                                                ----------------C-----T-AGG-G-A-TTT-C--GT-G-A-AA-T-C-ACTGG-AA
gi|14092                      :                   agcaagattgtgtaaaatggaggtgtcat----------------C-----C-AGT-G-A-TTT-C--AC-G-A-AA-T-C-CCTAG-AGTTC-T----TAG--TGA-TT-T-CA-TGAAATagtttttagtgatttcatgaaat
gi|14092                      :                                                ----------------C-----T-AGG-G-A-TTT-C--GT-G-A-AA-T-C-ACT
gi|14091                      :                                              cc----------------C-----C-AGT-G-A-TTT-C--AC-G-A-AA-T-C-CCTAG-AGTTT-T----TAG--TGG-TT-T-CA-TGAAATagttcttagtgatttcatgaaat
gi|14091                      :                                                ----------------C-----T-AGG-G-A-TTT-C--GT-G-A-AA-T-C-ACT
gi|14075                      :                                                               cc-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAagtttttagtggtttcatgaaat
gi|14084                      :                                    atgtatatgttacagtacgactgtgtaac-----T-AGG-G-A-TTT-C--GC-G-A-AA-T-C-CCTAaaactttcagggaattcgtgaaat
gi|14087                      :                                      acatatgttacagtaagactgtgtaac-----T-AGA-G-A-TTT-C--GC-G-A-AA-T-T-CCTAaaactttcaggaaattcatgaaat
gi|14077                      :                                           tgttacagtaaaactgtgtaac-----T-AGG-G-A-TTTCC--GC-GAA-AA-T-C-CCTAaaactttcaagaaattcgtgaaat
gi|14079                      :                                  atataattatgttacagtaagactgtgtaac-----T-AGG-G-A-TTT-C--AC-G-A-AA-T-C-TCTAaaactttcagggaatatatg
gi|14088                      :                                atactacatgtacatgtatatatactgtgtaac-----T-AGG-G-A-TTT-C--AT-G-A-AA-T-C-CCTAaaactttcagggaattcgtgaaat
gi|14076                      :                                         tgttacaataagactgatgcaactactaac-AGG-G-A-TTT-C--GC-A-A-AA-T-C-CCTAaaactttaagggaattca
gi|14086                      :                                          atatatatgttacagtaagactgtgtaac-AGG-G-A-TTT-C--GC-G-A-AA-TGCACCTAA-gaaactttctagtaggggatcca
gi|14075                      :                                                atatgtttacagtaagactgatgtttaac-A-TTT-C--AC-G-A-AT-T-C-CCTGA-AAGTT-T----TAG--GGA-TT-T-CG-CGAAATgaaactttcagaaggaattcgtgaaat
gi|14084                      :                                           atgtatatgttacagtacgactgtgtaactaggg-A-TTT-C--AT-G-A-AT-T-T-CCTGA-AAGTT-T----TAG--GGA-TT-T-CG-CGAAAT
gi|14079                      :                                             acatatgttacagtaagactgtgtaactaggg-A-TTT-C--AC-G-A-AT-T-C-CCTGA-AAGTT-T----TAG--GGA-TT-T-CA-CGAAAT
gi|14093                      :                                       atactacatgtacatgtatatatactgtgtaactagag-A-TTT-C--GC-A-A-AA-T-C-CCTAA-AACTT-T----CAG--GGA-AT-T-CG-TGAAAT
gi|14093                      :                                                                             -A-TTT-C--AC-G-A-AT-T-C-CCTGA-AAGTT-T----TAG--GGA-TT-T-TG-CGAAAT
gi|14090                      :                                                                             -A-TTT-C--GC-G-A-AA-T-C-CCTAA-AACTT-T----CAG--GAA-AT-T-CA-TGAAAT
gi|14089                      :                                                                 tgtgaaacaggg-A-TTT-C--AT-G-A-AA-T-C-ACTAA-AAACT-C----TAG--GGA-TT-T-CG-TGAAAT
gi|14092                      :                                        agcaagattgtgtaaaatggaggtgtcatttccagtg-A-TTT-C--AT-G-A-AA-T-C-ACTAA-GAACT-C----TAG--GGA-TT-T-CG-TGAAAT
gi|14091                      :                                                                       ccagtg-A-TTT-C--AT-G-A-AA-C-C-ACTAA-AAACT-C----TAG--GGA-TT-T-CG-TGAAAT
gi|14078                      :                                                                         ccagtg-TTC-C--AC-G-A-AT-T-C-CCTGA-AAGTTGT----TAG--GGA-TTCT-CGCTGAAA
gi|14088                      :                                                      atatatatttacagtaagattgtgtaactagggat-G-A-AT-T-C-CCTTA-AAGTT-T----TAG--GGA-TT-T-CA-TGAAAT
gi|14077                      :                                                             tgttacaataagactgatgcaactactaactaggg-T-C-CCTGA-AAGTT-T----TAG--GGA-TT-TCCG-CGAAAa





Alignments
lowQualScore                  :                                                   1111111111111111                                                                     
lowQualScore                  :         44  33    2   5   777      7  8888888 33  4444444444444444 55555 2   4 2 2    22  2  2  2       2       4444  22   33          
lowQualScore                  :         ..  ..    .   .   ...      .  ....... ..  ................ ..... .   . . .    ..  .  .  .       .       ....  ..   ..          
lowQualScore                  :         66  99    9   3   333      5  1111111 44  7777777777777777 66666 2   4 0 0    88  0  0  0       0       2222  88   00          
consensus                     :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
Reference ( family-860 )      :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-NTTCGTGAAAT
gi|14075                      :     TGTA--TA--TGTT-ACA-GTA---CGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14076                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTT--GC-GA-AA-TCCCTGA-AACTTTCTAGTAG--GGG-ATCC
gi|14077                      :    aTATAATTA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-ATTTTC--GCGGA-AA-TCCCTAA-AACTTTC----AG--GGA-Aa
gi|14078                      :    aTATA--TA--T-TT-ACA-GTA---AGATTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTTCAGC-GAGAA-TCCCTAACAACTTTC----AG--GGA-ATTCGTGGAAatatg
gi|14079                      :      aTA--CA--TGT--ACATGTATATATACTG-TG-------T--AA----------------C-----T-AGA-G-A-TTTC--GT-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14080                      : atacTATG--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGC-G-A-TTT---------------CTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14081                      :    aTATA--AA--TGTT-AAA-GTA---AGACTGATG-------T--AA----------------TAACGGT-AGGAG-A-TTTC--GC-GA-AA-T--CTAA-AACTTTC----AG--GGATAATCGTGAAAT
gi|14082                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTT----AG--GGA-ATTCGTGAAAT
gi|14083                      :     TATA--TACCTGT--ACATGTAT--ATAGCG-TG-------T--AA----------------C-----T-AGA-G-A-TT-C--GT-GA-AA-TCCCT-A-AACTTTC-----G--GGA-ATT-GTGAAAT
gi|14084                      :      ACA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14085                      :      ATA--TA--TGTT-AC--GTA---AGACTG-TG-------T--AA----------------C-----T-AAG-G-A-T--C--AC-GA-AAATCCCTAC-AAATTTC----AG--GAA-ATTCGTGAA
gi|14086                      :        A--TA--TGTTTACA-GTA---AGACTGATG-------TTTAA----------------C-----TTAGGTGCA-TTTC--GC-GA-AA-TCCCTGA-AACTTTC----AGAAGGA-ATTCGTGAAAT
gi|14087                      :             --TGTT-ACA-GTA---AAACTG-TG-------T--AA----------------C-----T-AGG-A-A-TTTC--GC-GA-AA-TCTCTAA-AACTTTC----AA--GAA-ATTCGTGAAAT
gi|14088                      :             --TGTT-ACA-ATA---AGACTGATGCAACTACT--AA----------------C-----T-AGG-G-A-TTTC--AT-GA-AA-TCCCTAA-AACTTTA----AG--GGA-ATTC
gi|14089                      :                      A-GCA---AGATTG-TG-------T--AAAATGGAGGTGTCATTTC-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGA-TTTCATGAAATa
gi|14090                      :                                  TG-TG-------A--AA----------------C-------AGG-G-A-TTTC--AT-GA-AT-TTCCTGA-AAGTTTT----AG--GGA-TTTCGCGAAAT
gi|14090                      :                                                                                -A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14091                      :                                       tgtgaaacaggg----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGG-TTTCATGAAAT
gi|14092                      :                                                   ----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTCTT----AG--TGA-TTTCATGAAAT
gi|14093                      :                                                                                -A-TTTC--GC-AA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT





Alignments
lowQualScore                  :                                                   1111111111111111                                                                     
lowQualScore                  :         44  33    2   5   777      7  8888888 33  4444444444444444 55555 2   4 2 2    22  2  2  2       2       4444  22   2           
lowQualScore                  :         ..  ..    .   .   ...      .  ....... ..  ................ ..... .   . . .    ..  .  .  .       .       ....  ..   .           
lowQualScore                  :         66  99    9   3   333      5  1111111 44  7777777777777777 66666 2   4 0 0    88  0  0  0       0       2222  88   0           
consensus                     :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
Reference ( family-860 )      :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14075                      :     TGTA--TA--TGTT-ACA-GTA---CGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14076                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTT--GC-GA-AA-TCCCTGA-AACTTTCTAGTAG--GGG-ATCC
gi|14077                      :    aTATAATTA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-ATTTTC--GCGGA-AA-TCCCTAA-AACTTTC----AG--GGA-ATa
gi|14078                      :    aTATA--TA--T-TT-ACA-GTA---AGATTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTTCAGC-GAGAA-TCCCTAACAACTTTC----AG--GGA-ATTCGTGGAAatatg
gi|14079                      :      aTA--CA--TGT--ACATGTATATATACTG-TG-------T--AA----------------C-----T-AGA-G-A-TTTC--GT-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14080                      : atacTATG--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGC-G-A-TTT---------------CTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14081                      :    aTATA--AA--TGTT-AAA-GTA---AGACTGATG-------T--AA----------------TAACGGT-AGGAG-A-TTTC--GC-GA-AA-T--CTAA-AACTTTC----AG--GGATAATCGTGAAAT
gi|14082                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTT----AG--GGA-ATTCGTGAAAT
gi|14083                      :     TATA--TACCTGT--ACATGTAT--ATAGCG-TG-------T--AA----------------C-----T-AGA-G-A-TT-C--GT-GA-AA-TCCCT-A-AACTTTC-----G--GGA-ATT-GTGAAAT
gi|14084                      :      ACA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14085                      :      ATA--TA--TGTT-AC--GTA---AGACTG-TG-------T--AA----------------C-----T-AAG-G-A-T--C--AC-GA-AAATCCCTAC-AAATTTC----AG--GAA-ATTCGTGAA
gi|14086                      :        A--TA--TGTTTACA-GTA---AGACTGATG-------TTTAA----------------C-----TTAGGTGCA-TTTC--GC-GA-AA-TCCCTGA-AACTTTC----AGAAGGA-ATTCGTGAAAT
gi|14087                      :             --TGTT-ACA-GTA---AAACTG-TG-------T--AA----------------C-----T-AGG-A-A-TTTC--GC-GA-AA-TCTCTAA-AACTTTC----AA--GAA-ATTCGTGAAAT
gi|14088                      :             --TGTT-ACA-ATA---AGACTGATGCAACTACT--AA----------------C-----T-AGG-G-A-TTTC--AT-GA-AA-TCCCTAA-AACTTTA----AG--GGA-ATTC
gi|14089                      :                      A-GCA---AGATTG-TG-------T--AAAATGGAGGTGTCATTTC-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGA-TTTCATGAAATa
gi|14090                      :                                  TG-TG-------A--AA----------------C-------AGG-G-A-TTTC--AT-GA-AT-TTCCTGA-AAGTTTT----AG--GGA-TTTCGCGAAAT
gi|14090                      :                                                                                -A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14091                      :                                       tgtgaaacaggg----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGG-TTTCATGAAAT
gi|14092                      :                                                   ----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTCTT----AG--TGA-TTTCATGAAAT
gi|14093                      :                                                                                -A-TTTC--GC-AA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT


blockSeqs                     :         AT  CC    T   T   TAT      A  CAACTAC TT  AATGGAGGTGTCATTT AACGG T   A C T    CA  G  G  A       C       TAGT  AA   T
blockSeqs                     :         .   .     .   T   T        A  .       .   .                .     .   T . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        A  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :         .   .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :             .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :             .     .   .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :                       .   .        .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :                                    .  .       .   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :                                                   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :                                                   .                .     .   . . .    .   .  .  .       .       .     .    .
blockSeqs                     :                                                                                . .    .   .  .  .       .       .     .    .
blockSeqs                     :                                                                                . .    .   .  .  .       .       .     .    .


blockSeqCons                  :     
originalCons                  :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
finalCons                     :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT





Alignments
lowQualScore                  :                                                   1111111111111111                                                                     
lowQualScore                  :         44  33    2   5   777      7  8888888 33  4444444444444444 55555 2   4 2 2    22  2  2  2       2       4444  22   2           
lowQualScore                  :         ..  ..    .   .   ...      .  ....... ..  ................ ..... .   . . .    ..  .  .  .       .       ....  ..   .           
lowQualScore                  :         66  99    9   3   333      5  1111111 44  7777777777777777 66666 2   4 0 0    88  0  0  0       0       2222  88   0           
consensus                     :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
Reference ( family-860 )      :     TATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14075                      :     TGTA--TA--TGTT-ACA-GTA---CGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14076                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTT--GC-GA-AA-TCCCTGA-AACTTTCTAGTAG--GGG-ATCC
gi|14077                      :    aTATAATTA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-ATTTTC--GCGGA-AA-TCCCTAA-AACTTTC----AG--GGA-ATa
gi|14078                      :    aTATA--TA--T-TT-ACA-GTA---AGATTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTTCAGC-GAGAA-TCCCTAACAACTTTC----AG--GGA-ATTCGTGGAAatatg
gi|14079                      :      aTA--CA--TGT--ACATGTATATATACTG-TG-------T--AA----------------C-----T-AGA-G-A-TTTC--GT-GA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14080                      : atacTATG--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGC-G-A-TTT---------------CTAA-AACTTTC----AG--GGA-ATTCGTGAAAT
gi|14081                      :    aTATA--AA--TGTT-AAA-GTA---AGACTGATG-------T--AA----------------TAACGGT-AGGAG-A-TTTC--GC-GA-AA-T--CTAA-AACTTTC----AG--GGATAATCGTGAAAT
gi|14082                      :    aTATA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTT----AG--GGA-ATTCGTGAAAT
gi|14083                      :     TATA--TACCTGT--ACATGTAT--ATAGCG-TG-------T--AA----------------C-----T-AGA-G-A-TT-C--GT-GA-AA-TCCCT-A-AACTTTC-----G--GGA-ATT-GTGAAAT
gi|14084                      :      ACA--TA--TGTT-ACA-GTA---AGACTG-TG-------T--AA----------------C-----T-AGG-G-A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14085                      :      ATA--TA--TGTT-AC--GTA---AGACTG-TG-------T--AA----------------C-----T-AAG-G-A-T--C--AC-GA-AAATCCCTAC-AAATTTC----AG--GAA-ATTCGTGAA
gi|14086                      :        A--TA--TGTTTACA-GTA---AGACTGATG-------TTTAA----------------C-----TTAGGTGCA-TTTC--GC-GA-AA-TCCCTGA-AACTTTC----AGAAGGA-ATTCGTGAAAT
gi|14087                      :             --TGTT-ACA-GTA---AAACTG-TG-------T--AA----------------C-----T-AGG-A-A-TTTC--GC-GA-AA-TCTCTAA-AACTTTC----AA--GAA-ATTCGTGAAAT
gi|14088                      :             --TGTT-ACA-ATA---AGACTGATGCAACTACT--AA----------------C-----T-AGG-G-A-TTTC--AT-GA-AA-TCCCTAA-AACTTTA----AG--GGA-ATTC
gi|14089                      :                      A-GCA---AGATTG-TG-------T--AAAATGGAGGTGTCATTTC-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGA-TTTCATGAAATa
gi|14090                      :                                  TG-TG-------A--AA----------------C-------AGG-G-A-TTTC--AT-GA-AT-TTCCTGA-AAGTTTT----AG--GGA-TTTCGCGAAAT
gi|14090                      :                                                                                -A-TTTC--GC-GA-AA-TCCCTAA-AACTTTC----AG--GAA-ATTCATGAAAT
gi|14091                      :                                       tgtgaaacaggg----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTTTT----AG--TGG-TTTCATGAAAT
gi|14092                      :                                                   ----------------C-----C-AGT-G-A-TTTC--AC-GA-AA-TCCCTAG-AGTTCTT----AG--TGA-TTTCATGAAAT
gi|14093                      :                                                                                -A-TTTC--GC-AA-AA-TCCCTAA-AACTTTC----AG--GGA-ATTCGTGAAAT