lowQualScore : 11111111 22
lowQualScore : 3333 333 1 3 33333333 1 44 1 1 1 1 44 3 5555 22 3333 1 55
lowQualScore : .... ... . . ........ . .. . . . . .. . .... .. .... . ..
lowQualScore : 7777 111 7 5 55555555 8 44 7 7 7 7 11 5 4444 44 7777 7 33
consensus : TATTTTTC----TCGGG--T-GC-A-G--T-A-TAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA-TTTTTCTTT
Reference ( gi|5698 ) : TATTTTTC----TCGGA--T-GC-A-G--T-G-TAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTTTCTTT
gi|5700 : TATTTTTC----TCGGA--T-GC-A-G--T-A-CAAG-TTT--C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTCT
gi|5701 : TATTTTTC----TCGGA--T-GC-A-G--T-G-CAAT-TTTT-C-AAACA-CAG-A--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTTt
gi|5702 : TATTTTTC----TCGGA--T-GC-A-G--T-A-TTAT-TTTT-C-TAACA-CAG-A--C-AACGTTCGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5703 : TATTTTTC----TCGGA--T-GC-A-G--T-A-TAAGTTTTT-C-TAA-A-CAG-A--C-AA----CGATACACTT----AAA-CGA--TTTTCTTT
gi|5704 : TATTTTTC----TCGGA--T-GC-A-G--T-A-TTA--TTTT-T-TAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAATT
gi|5706 : TATTTTTCCATTTCGGA--TAGC-A-GG-T-G-TCAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAACCGA--TTTTCTTTacttt
gi|5707 : TATTTTTC----TCGG---T-GCCA-G--T-G-TAAG-TTTTTC-AAACA-CAG-G--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5712 : TGTTTTTC----TCGGG--T-GC-A-T--T-A-TAAG-TTTT-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGAGTTT
gi|5708 : TATTTTTC----TCGGA--T-GC-A-G--T-A-T-AT-TTTT-C-TAACACCAG-ACTC-AAC---CGAC--ACCT----AAA-CGATTTTCTattt
gi|5709 : TATTTTTC----TCGGA--T-GC-A-G--T-T-GAAG-TTTT-CAAAACA-CAG-A--C-AA----CGAT--GCC-----GAA-CAA--TTTTCTTTt
gi|5711 : TAATTTTC----TCGGA----GC-A-G--T-T-GAAC-TTTT-C-GAACA-CAG-A--C-AA----CGAT--ACCT----AAA-AGATTTT
gi|5699 : TATTTTTC----TCGGA--T-GC-A-G--T-A-TA----TTT-T-T--CA-CAGGA--C-AA----CGAC--ACCT----AAA-CGA--TTTTCTTTattt
gi|5710 : TGTTTTTC----TCGGG--T-GT-A-T--T-T-TAAG-TTTT-C-TAACA-CAG-A--C-AA----CTAT--ACGT----AAA-CAA--GTTTCTTT
gi|5713 : TGTTTTTC----TCGGG--T-GC-A-T--T-A-TAAG-TTTC-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGAGTTT
gi|5705 : TATTTTTT----TCGGA--T-GC-AAG--T-A-TTAT-TTTT-T-AAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAATTattt
gi|5714 : TGTTTTTC----TCGGG--T-GC-A----T-GATAAG-TTTT-C-TAACA-GAT-A--C-AA----CAAT--GCTT----AAA-CGAGTTTCTacttt
gi|5716 : TGTTTTTT----TCGGG--T-GC-A----T-GATAAG-TTTT-C-TAACA-CAG-A--CAAA----CAAT--GCTTTTAAAAA-CGATTCT
gi|5715 : TGTTTTTC----TCGGG--T-GC-A--------------------TA-CA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA--TTTTCTTT
gi|5717 : TATTTTTC----TCGAG--T-GCAA-G--T-A-T-AT-TTCT-T-TAACA--AG-AC-C-AA----AGA---ACCT----AAA-CA---TTTTCTTT
gi|5718 : ATGTTTC----TCG----T-GC-A-T--T-A-TAAG-TTTT-C-TAACA-AAG-A--CAAA----CGAT--GCGT----AAA-CGATTTTCT
gi|5719 : TTTTTC----TCGGG--T-GC-A-AATT-A-TAAG-TTTT-C-TAACA-CAG-A--C-AA----CAAT--GCGT----AAA-TGG--GTTTCTTTt
gi|5720 : TTTTTT----TCGGG--T-GC-A--------------------TA-CA-CAG-G--C-AA----CGAT--GCCT----AAA-TGA--TTTTCTTT
gi|5721 : TTTC----TCGGGGGT-AC-A-T--TTA-TAAA-TTTT-C-TA--A-CAG-A--C--A----CGAT--GCGT----AAA-CGA--ATTTCTTT
Alignments
lowQualScore : 22
lowQualScore : 3333 333 1 3 7777 1 1 33 1 1 1 1 44 3 5555 22 3333 1 77
lowQualScore : .... ... . . .... . . .. . . . . .. . .... .. .... . ..
lowQualScore : 5555 444 7 3 8888 7 3 88 7 7 7 7 00 3 2222 33 5555 7 33
consensus : TATTTTTC----TCGGG--T-GC-A-G--T-ATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
Reference ( family-753 ) : TATTTTTC----TCGGG--T-GC-A-G--T-ATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA-TTTTTCTTT
gi|5698 : TATTTTTC----TCGGA--T-GC-A-G--T-GTAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTTTCTTT
gi|5699 : TATTTTTC----TCGGA--T-GC-A-G--T-ATA----TTT-T-T--CA-CAGGA--C-AA----CGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5700 : TATTTTTC----TCGGA--T-GC-A-G--T-ACAAG-TTT--C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTT
gi|5701 : TATTTTTC----TCGGA--T-GC-A-G--T-GCAAT-TTTT-C-AAACA-CAG-A--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5702 : TATTTTTC----TCGGA--T-GC-A-G--T-ATTAT-TTTT-C-TAACA-CAG-A--C-AACGTTCGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5703 : TATTTTTC----TCGGA--T-GC-A-G--T-ATAAGTTTTT-C-TAA-A-CAG-A--C-AA----CGATACACTT----AAA-CGA--TTTTCTTT
gi|5704 : TATTTTTC----TCGGA--T-GC-A-G--T-ATTA--TTTT-T-TAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA-TTT
gi|5705 : TATTTTTT----TCGGA--T-GC-AAG--T-ATTAT-TTTT-T-AAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA-TTTacttt
gi|5706 : TATTTTTCCATTTCGGA--TAGC-A-GG-T-GTCAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAACCGA--TTTTCTTTacttt
gi|5707 : TATTTTTC----TCGG---T-GCCA-G--T-GTAAG-TTTTTC-AAACA-CAG-G--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5708 : TATTTTTC----TCGGA--T-GC-A-G--T-AT-AT-TTTT-C-TAACACCAG-ACTC-AAC---CGAC--ACCT----AAA-CGA--TTTTCTT
gi|5709 : TATTTTTC----TCGGA--T-GC-A-G--T-TGAAG-TTTT-CAAAACA-CAG-A--C-AA----CGAT--GCC-----GAA-CAA--TTTTCTTT
gi|5710 : TGTTTTTC----TCGGG--T-GT-A-T--T-TTAAG-TTTT-C-TAACA-CAG-A--C-AA----CTAT--ACGT----AAA-CAA--GTTTCTTT
gi|5711 : TAATTTTC----TCGGA----GC-A-G--T-TGAAC-TTTT-C-GAACA-CAG-A--C-AA----CGAT--ACCT----AAA-AGA-TTTT
gi|5712 : TGTTTTTC----TCGGG--T-GC-A-T--T-ATAAG-TTTT-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA-GTTTattt
gi|5713 : TGTTTTTC----TCGGG--T-GC-A-T--T-ATAAG-TTTC-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA-GTTTattt
gi|5714 : TGTTTTTC----TCGGG--T-GC-A-T--G-ATAAG-TTTT-C-TAACA-GAT-A--C-AA----CAAT--GCTT----AAA-CGA-GTTTattt
gi|5715 : TGTTTTTC----TCGGG--T-GC-A-------------------TA-CA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA--TTTTCTTTct
gi|5716 : TGTTTTTT----TCGGG--T-GC-A-T--G-ATAAG-TTTT-C-TAACA-CAG-A--CAAA----CAAT--GCTTTTAAAAA-CGA-TTCT
gi|5717 : TATTTTTC----TCGAG--T-GCAA-G--T-AT-AT-TTCT-T-TAACA--AG-AC-C-AA----AGA---ACCT----AAA-CA---TTTTCTTT
gi|5718 : ATGTTTC----TCG----T-GC-A-T--T-ATAAG-TTTT-C-TAACA-AAG-A--CAAA----CGAT--GCGT----AAA-CGA--TTTTCTT
gi|5719 : TTTTTC----TCGGG--T-GC-A-AATT-ATAAG-TTTT-C-TAACA-CAG-A--C-AA----CAAT--GCGT----AAA-TGG--GTTTCTTT
gi|5720 : TTTTTT----TCGGG--T-GC-A-------------------TA-CA-CAG-G--C-AA----CGAT--GCCT----AAA-TGA--TTTTCTTT
gi|5721 : TTTC----TCGGGGGT-AC-A-T--TTATAAA-TTTT-C-TA--A-CAG-A--C--A----CGAT--GCGT----AAA-CGA--ATTTCTTT
Alignments
lowQualScore : 3333 22 1 1 3 9999 1 33 1 1 1 1 44 3 5555 22 3333 1 22
lowQualScore : .... .. . . . .... . .. . . . . .. . .... .. .... . ..
lowQualScore : 5555 33 1 7 3 4444 3 88 7 7 7 7 00 3 2222 33 5555 7 33
consensus : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
Reference ( family-753 ) : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
gi|5698 : TATTTTTC----TC--GGAT-GC-A-G--TGTAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTTTCTTT
gi|5699 : TATTTTTC----TC--GGAT-GC-A-G--TATA----TTT-T-T--CA-CAGGA--C-AA----CGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5700 : TATTTTTC----TC--GGAT-GC-A-G--TACAAG-TTT--C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTT
gi|5701 : TATTTTTC----TC--GGAT-GC-A-G--TGCAAT-TTTT-C-AAACA-CAG-A--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5702 : TATTTTTC----TC--GGAT-GC-A-G--TATTAT-TTTT-C-TAACA-CAG-A--C-AACGTTCGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5703 : TATTTTTC----TC--GGAT-GC-A-G--TATAAGTTTTT-C-TAA-A-CAG-A--C-AA----CGATACACTT----AAA-CGA--TTTTCTTT
gi|5704 : TATTTTTC----TC--GGAT-GC-A-G--TATTA--TTTT-T-TAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5705 : TATTTTTT----TC--GGAT-GC-AAG--TATTAT-TTTT-T-AAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5706 : TATTTTTCCATTTC--GGATAGC-A-GG-TGTCAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAACCGA--TTTTCTTT
gi|5707 : TATTTTTC----TC--GG-T-GCCA-G--TGTAAG-TTTTTC-AAACA-CAG-G--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5708 : TATTTTTC----TC--GGAT-GC-A-G--TAT-AT-TTTT-C-TAACACCAG-ACTC-AAC---CGAC--ACCT----AAA-CGA--TTTTCTT
gi|5709 : TATTTTTC----TC--GGAT-GC-A-G--TTGAAG-TTTT-CAAAACA-CAG-A--C-AA----CGAT--GCC-----GAA-CAA--TTTTCTTT
gi|5710 : TGTTTTTC----TC--GGGT-GT-A-T--TTTAAG-TTTT-C-TAACA-CAG-A--C-AA----CTAT--ACGT----AAA-CAA--GTTTCTTT
gi|5711 : TAATTTTC----TC--GGA--GC-A-G--TTGAAC-TTTT-C-GAACA-CAG-A--C-AA----CGAT--ACCT----AAA-AGA--TTTTATTT
gi|5712 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTT-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5713 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTC-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5714 : TGTTTTTC----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-GAT-A--C-AA----CAAT--GCTT----AAA-CGA--GTTTCT
gi|5715 : TGTTTTTC----TC--GGGT-GC-A------------------TA-CA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA--TTTTCTTT
gi|5716 : TGTTTTTT----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-CAG-A--CAAA----CAAT--GCTTTTAAAAA-CGA--TTCT
gi|5717 : TATTTTTC----TC--GAGT-GCAA-G--TAT-AT-TTCT-T-TAACA--AG-AC-C-AA----AGA---ACCT----AAA-C-A--TTTTCTTT
gi|5718 : ATGTTTC----TC--G--T-GC-A-T--TATAAG-TTTT-C-TAACA-AAG-A--CAAA----CGAT--GCGT----AAA-CGA--TTTTCTT
gi|5719 : TTTTTC----TC--GGGT-GC-A-AATTATAAG-TTTT-C-TAACA-CAG-A--C-AA----CAAT--GCGT----AAA-TGG--GTTTCTTT
gi|5720 : TTTTTT----TC--GGGT-GC-A------------------TA-CA-CAG-G--C-AA----CGAT--GCCT----AAA-TGA--TTTTCTTT
gi|5721 : TTTC----TCGGGGGT-AC-ATT--TATAAA-TTTT-C-TA--A-CAG-A--C--A----CGAT--GCGT----AAA-CGA--ATTTCTTT
Alignments
lowQualScore : 3333 22 1 1 3 9999 1 33 1 1 1 1 44 3 5555 22 3333 1 22
lowQualScore : .... .. . . . .... . .. . . . . .. . .... .. .... . ..
lowQualScore : 5555 33 1 7 3 4444 3 88 7 7 7 7 00 3 2222 33 5555 7 33
consensus : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
Reference ( family-753 ) : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
gi|5698 : TATTTTTC----TC--GGAT-GC-A-G--TGTAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTTTCTTT
gi|5699 : TATTTTTC----TC--GGAT-GC-A-G--TATA----TTT-T-T--CA-CAGGA--C-AA----CGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5700 : TATTTTTC----TC--GGAT-GC-A-G--TACAAG-TTT--C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTT
gi|5701 : TATTTTTC----TC--GGAT-GC-A-G--TGCAAT-TTTT-C-AAACA-CAG-A--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5702 : TATTTTTC----TC--GGAT-GC-A-G--TATTAT-TTTT-C-TAACA-CAG-A--C-AACGTTCGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5703 : TATTTTTC----TC--GGAT-GC-A-G--TATAAGTTTTT-C-TAA-A-CAG-A--C-AA----CGATACACTT----AAA-CGA--TTTTCTTT
gi|5704 : TATTTTTC----TC--GGAT-GC-A-G--TATTA--TTTT-T-TAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5705 : TATTTTTT----TC--GGAT-GC-AAG--TATTAT-TTTT-T-AAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5706 : TATTTTTCCATTTC--GGATAGC-A-GG-TGTCAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAACCGA--TTTTCTTT
gi|5707 : TATTTTTC----TC--GG-T-GCCA-G--TGTAAG-TTTTTC-AAACA-CAG-G--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5708 : TATTTTTC----TC--GGAT-GC-A-G--TAT-AT-TTTT-C-TAACACCAG-ACTC-AAC---CGAC--ACCT----AAA-CGA--TTTTCTT
gi|5709 : TATTTTTC----TC--GGAT-GC-A-G--TTGAAG-TTTT-CAAAACA-CAG-A--C-AA----CGAT--GCC-----GAA-CAA--TTTTCTTT
gi|5710 : TGTTTTTC----TC--GGGT-GT-A-T--TTTAAG-TTTT-C-TAACA-CAG-A--C-AA----CTAT--ACGT----AAA-CAA--GTTTCTTT
gi|5711 : TAATTTTC----TC--GGA--GC-A-G--TTGAAC-TTTT-C-GAACA-CAG-A--C-AA----CGAT--ACCT----AAA-AGA--TTTTATTT
gi|5712 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTT-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5713 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTC-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5714 : TGTTTTTC----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-GAT-A--C-AA----CAAT--GCTT----AAA-CGA--GTTTCT
gi|5715 : TGTTTTTC----TC--GGGT-GC-A------------------TA-CA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA--TTTTCTTT
gi|5716 : TGTTTTTT----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-CAG-A--CAAA----CAAT--GCTTTTAAAAA-CGA--TTCT
gi|5717 : TATTTTTC----TC--GAGT-GCAA-G--TAT-AT-TTCT-T-TAACA--AG-AC-C-AA----AGA---ACCT----AAA-C-A--TTTTCTTT
gi|5718 : ATGTTTC----TC--G--T-GC-A-T--TATAAG-TTTT-C-TAACA-AAG-A--CAAA----CGAT--GCGT----AAA-CGA--TTTTCTT
gi|5719 : TTTTTC----TC--GGGT-GC-A-AATTATAAG-TTTT-C-TAACA-CAG-A--C-AA----CAAT--GCGT----AAA-TGG--GTTTCTTT
gi|5720 : TTTTTT----TC--GGGT-GC-A------------------TA-CA-CAG-G--C-AA----CGAT--GCCT----AAA-TGA--TTTTCTTT
gi|5721 : TTTC----TCGGGGGT-AC-ATT--TATAAA-TTTT-C-TA--A-CAG-A--C--A----CGAT--GCGT----AAA-CGA--ATTTCTTT
blockSeqs : CATT GG A A C AAT A GT T A C G CT A CGTT AC TTAA C .
blockSeqs : . . A . A AG A G . . . . C A C . . . .
blockSeqs : . . A . . GG A T . . . . . . . . . . .
blockSeqs : . . A . . TT T T . . . . . . . . . . .
blockSeqs : . . A . . G A T . . . . . . . . . . .
blockSeqs : . . A . . G T G . . . . . . . . . . .
blockSeqs : . . A . . G T G . . . . . . . . . . .
blockSeqs : . . A . . G C T . . . . . . . . . . .
blockSeqs : . . A . . G A G . . . . . . . . . . .
blockSeqs : . . A . . G A G . . . . . . . . . . .
blockSeqs : . . G . . G A C . . . . . . . . . . .
blockSeqs : . . A . . G A G . . . . . . . . . . .
blockSeqs : . . G . . G A G . . . . . . . . . . .
blockSeqs : . . G . . T A G . . . . . . . . . . .
blockSeqs : . . G . . G A G . . . . . . . . . . .
blockSeqs : . . G . . T A T . . . . . . . . . . .
blockSeqs : . . G . . T A G . . . . . . . . . . .
blockSeqs : . . G . . T A G . . . . . . . . . . .
blockSeqs : . . G . . T A A . . . . . . . . . . .
blockSeqs : . . G . . G . . . . . . . . . . . . .
blockSeqs : . . G . . T . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . .
blockSeqCons : **
originalCons : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
finalCons : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
Alignments
lowQualScore : 3333 22 1 1 3 9999 1 33 1 1 1 1 44 3 5555 22 3333 1 22
lowQualScore : .... .. . . . .... . .. . . . . .. . .... .. .... . ..
lowQualScore : 5555 33 1 7 3 4444 3 88 7 7 7 7 00 3 2222 33 5555 7 33
consensus : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
Reference ( family-753 ) : TATTTTTC----TC--GGGT-GC-A-G--TATAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTTT
gi|5698 : TATTTTTC----TC--GGAT-GC-A-G--TGTAAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGATTTTTTCTTT
gi|5699 : TATTTTTC----TC--GGAT-GC-A-G--TATA----TTT-T-T--CA-CAGGA--C-AA----CGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5700 : TATTTTTC----TC--GGAT-GC-A-G--TACAAG-TTT--C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAA-CGA--TTTTCTT
gi|5701 : TATTTTTC----TC--GGAT-GC-A-G--TGCAAT-TTTT-C-AAACA-CAG-A--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5702 : TATTTTTC----TC--GGAT-GC-A-G--TATTAT-TTTT-C-TAACA-CAG-A--C-AACGTTCGAC--ACCT----AAA-CGA--TTTTCTTT
gi|5703 : TATTTTTC----TC--GGAT-GC-A-G--TATAAGTTTTT-C-TAA-A-CAG-A--C-AA----CGATACACTT----AAA-CGA--TTTTCTTT
gi|5704 : TATTTTTC----TC--GGAT-GC-A-G--TATTA--TTTT-T-TAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5705 : TATTTTTT----TC--GGAT-GC-AAG--TATTAT-TTTT-T-AAACA-CAG-A--C-AA----CGAC--ACCT----AAA-CAA--TTTACTTT
gi|5706 : TATTTTTCCATTTC--GGATAGC-A-GG-TGTCAG-TTTT-C-TAACA-CAG-A--C-AA----CGAT--ACCT----AAACCGA--TTTTCTTT
gi|5707 : TATTTTTC----TC--GG-T-GCCA-G--TGTAAG-TTTTTC-AAACA-CAG-G--C-AA----CGAT--ACCG----AAA-CGA--TTTTCTTT
gi|5708 : TATTTTTC----TC--GGAT-GC-A-G--TAT-AT-TTTT-C-TAACACCAG-ACTC-AAC---CGAC--ACCT----AAA-CGA--TTTTCTT
gi|5709 : TATTTTTC----TC--GGAT-GC-A-G--TTGAAG-TTTT-CAAAACA-CAG-A--C-AA----CGAT--GCC-----GAA-CAA--TTTTCTTT
gi|5710 : TGTTTTTC----TC--GGGT-GT-A-T--TTTAAG-TTTT-C-TAACA-CAG-A--C-AA----CTAT--ACGT----AAA-CAA--GTTTCTTT
gi|5711 : TAATTTTC----TC--GGA--GC-A-G--TTGAAC-TTTT-C-GAACA-CAG-A--C-AA----CGAT--ACCT----AAA-AGA--TTTTATTT
gi|5712 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTT-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5713 : TGTTTTTC----TC--GGGT-GC-A-T--TATAAG-TTTC-C-TAACA--AG-A--C-AA----CGAT--GCGT----AAA-CGA--GTTTATTT
gi|5714 : TGTTTTTC----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-GAT-A--C-AA----CAAT--GCTT----AAA-CGA--GTTTCT
gi|5715 : TGTTTTTC----TC--GGGT-GC-A------------------TA-CA-CAG-A--C-AA----CGAT--GCCT----AAA-CGA--TTTTCTTT
gi|5716 : TGTTTTTT----TC--GGGT-GC-A-T--GATAAG-TTTT-C-TAACA-CAG-A--CAAA----CAAT--GCTTTTAAAAA-CGA--TTCT
gi|5717 : TATTTTTC----TC--GAGT-GCAA-G--TAT-AT-TTCT-T-TAACA--AG-AC-C-AA----AGA---ACCT----AAA-C-A--TTTTCTTT
gi|5718 : ATGTTTC----TC--G--T-GC-A-T--TATAAG-TTTT-C-TAACA-AAG-A--CAAA----CGAT--GCGT----AAA-CGA--TTTTCTT
gi|5719 : TTTTTC----TC--GGGT-GC-A-AATTATAAG-TTTT-C-TAACA-CAG-A--C-AA----CAAT--GCGT----AAA-TGG--GTTTCTTT
gi|5720 : TTTTTT----TC--GGGT-GC-A------------------TA-CA-CAG-G--C-AA----CGAT--GCCT----AAA-TGA--TTTTCTTT
gi|5721 : TTTC----TCGGGGGT-AC-ATT--TATAAA-TTTT-C-TA--A-CAG-A--C--A----CGAT--GCGT----AAA-CGA--ATTTCTTT