lowQualScore : 1 333 1 444444 1 999 22 1
lowQualScore : . ... . ...... . ... .. .
lowQualScore : 7 000 7 888888 7 666 33 7
consensus : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
Reference ( gi|74951 ) : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74953 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGCCTGTGTTTCA
gi|74948 : TGTTATTA-CAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74949 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74947 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74950 : TGTTATTAACAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74955 : TGTTATTG-CAG---CTCCAGGC-AGG------TA-ATATC--GGTT--GATAAAAG-TTGTCTGTGTTT
gi|74957 : TGTTATTA-CAA---CTCCAGGC-ATG------TA-ATATC--AGCT--GATAGAAG-TTGTCTGTGTTTCA
gi|74958 : TATTATTA-CAG---CTCCATGC-AGG------TA-ATATC--GGCT--GATACAAG-TTGCCTGTGTTTCA
gi|74954 : TGTTATTA-CAG---CCCAAGGC-AGG------TA-ATATG--GGCTTCGATAAAAG-TTGTCTGTGTTTCA
gi|74959 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GGCT--GATAAATA-TTGTCTGTGTT
gi|74956 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GACT--GATAAAAG-TTGTCTTTG
gi|74961 : TGTTATTA-GAG---CTCCAGGC-AGG------T--ATATC--GGCT--GATAAAAGTTTGTCCTTGTTTCA
gi|74962 : TGTTATTA-CAG---CTCTAGGC-AGG------TA-ATATG--GGCC--GATAGAAG-
gi|74960 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATATG--GGTT--GATAAA
gi|74952 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATAT-----AT---ATAAAGG-TTGACTGCGTTTCA
gi|74964 : TGTTATTA-CAG---CTCC-GGC-ACGTACATATA-ATATT--GGCT--GAATAAAG-T--TCTGTGTTTCA
gi|74963 : TGTTATTA-CAG---CTCCTGGG-TGG------TA-ATACG--GGCT--GATAAAAG-TT
gi|74965 : TGTAATTA-CAG---CTCCAGGC-----------------------T--GATAAAAG-TTGTCTGTATTTCA
gi|74966 : GTTATTA-CAG---CTCCAGGC-AGG------TA-AT----------------AAG-TTGTATGTGTTTCA
gi|74968 : TATTA-CAG---CTCCATGC-AGT------GA-ATATC--GGCT--G-TAAAAG-T--TCTGTGTTTCA
gi|74967 : TATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GG-----------G-TTGTCTGTGTTT
gi|74969 : TCA-CTG---CTCCAGGC-AGG------TA-ATATC--GGCA--GATAGAAG-TTGTCCGTGTTTCA
gi|74970 : TTA-CAGGCGCTCCAGGCTAGG------TAGATATC--GGCT--GATAA--G-TTGTCTGTGCTTC
gi|74971 : CCAGGC-AGG------TA-ATATATGGGCT--GATAAAA----GTCTGTGTTTCA
Alignments
lowQualScore : 1 222 1 444444 1 888 22 1
lowQualScore : . ... . ...... . ... .. .
lowQualScore : 7 999 6 666666 6 888 22 7
consensus : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
Reference ( family-732 ) : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74947 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74948 : TGTTATTA-CAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74949 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74950 : TGTTATTAACAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74951 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74952 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATAT-----AT---ATAAAGG-TTGACTGCGTTTCA
gi|74953 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGCCTGTGTTTCA
gi|74954 : TGTTATTA-CAG---CCCAAGGC-AGG------TA-ATATG--GGCTTCGATAAAAG-TTGTCTGTGTTTCA
gi|74955 : TGTTATTG-CAG---CTCCAGGC-AGG------TA-ATATC--GGTT--GATAAAAG-TTGTCTGTGTTT
gi|74956 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GACT--GATAAAAG-TTGTCTTTG
gi|74957 : TGTTATTA-CAA---CTCCAGGC-ATG------TA-ATATC--AGCT--GATAGAAG-TTGTCTGTGTTTCA
gi|74958 : TATTATTA-CAG---CTCCATGC-AGG------TA-ATATC--GGCT--GATACAAG-TTGCCTGTGTTTCA
gi|74959 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GGCT--GATAAATA-TTGTCTGTGTT
gi|74960 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATATG--GGTT--GATAAA
gi|74961 : TGTTATTA-GAG---CTCCAGGC-AGG------T--ATATC--GGCT--GATAAAAGTTTGTCCTTGTTTCA
gi|74962 : TGTTATTA-CAG---CTCTAGGC-AGG------TA-ATATG--GGCC--GATAGAAG-
gi|74963 : TGTTATTA-CAG---CTCCTGGG-TGG------TA-ATACG--GGCT--GATAAAAG-TT
gi|74964 : TGTTATTA-CAG---CTCC-GGC-ACGTACATATA-ATATT--GGCT--GAATAAAG-T--TCTGTGTTTCA
gi|74965 : TGTAATTA-CAG---CTCCAGGC-----------------------T--GATAAAAG-TTGTCTGTATTTCA
gi|74966 : GTTATTA-CAG---CTCCAGGC-AGG------TA-AT----------------AAG-TTGTATGTGTTTCA
gi|74967 : TATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GG-----------G-TTGTCTGTGTTT
gi|74968 : TATTA-CAG---CTCCATGC-AGT------GA-ATATC--GGCT--G-TAAAAG-T--TCTGTGTTTCA
gi|74969 : TCA-CTG---CTCCAGGC-AGG------TA-ATATC--GGCA--GATAGAAG-TTGTCCGTGTTTCA
gi|74970 : TTA-CAGGCGCTCCAGGCTAGG------TAGATATC--GGCT--GATAA--G-TTGTCTGTGCTTC
gi|74971 : CCAGGC-AGG------TA-ATATATGGGCT--GATAAAA----GTCTGTGTTTCA
Alignments
lowQualScore : 1 222 1 444444 1 888 22 1
lowQualScore : . ... . ...... . ... .. .
lowQualScore : 7 999 6 666666 6 888 22 7
consensus : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
Reference ( family-732 ) : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74947 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74948 : TGTTATTA-CAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74949 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74950 : TGTTATTAACAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74951 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74952 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATAT-----AT---ATAAAGG-TTGACTGCGTTTCA
gi|74953 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGCCTGTGTTTCA
gi|74954 : TGTTATTA-CAG---CCCAAGGC-AGG------TA-ATATG--GGCTTCGATAAAAG-TTGTCTGTGTTTCA
gi|74955 : TGTTATTG-CAG---CTCCAGGC-AGG------TA-ATATC--GGTT--GATAAAAG-TTGTCTGTGTTT
gi|74956 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GACT--GATAAAAG-TTGTCTTTG
gi|74957 : TGTTATTA-CAA---CTCCAGGC-ATG------TA-ATATC--AGCT--GATAGAAG-TTGTCTGTGTTTCA
gi|74958 : TATTATTA-CAG---CTCCATGC-AGG------TA-ATATC--GGCT--GATACAAG-TTGCCTGTGTTTCA
gi|74959 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GGCT--GATAAATA-TTGTCTGTGTT
gi|74960 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATATG--GGTT--GATAAA
gi|74961 : TGTTATTA-GAG---CTCCAGGC-AGG------T--ATATC--GGCT--GATAAAAGTTTGTCCTTGTTTCA
gi|74962 : TGTTATTA-CAG---CTCTAGGC-AGG------TA-ATATG--GGCC--GATAGAAG-
gi|74963 : TGTTATTA-CAG---CTCCTGGG-TGG------TA-ATACG--GGCT--GATAAAAG-TT
gi|74964 : TGTTATTA-CAG---CTCC-GGC-ACGTACATATA-ATATT--GGCT--GAATAAAG-T--TCTGTGTTTCA
gi|74965 : TGTAATTA-CAG---CTCCAGGC-----------------------T--GATAAAAG-TTGTCTGTATTTCA
gi|74966 : GTTATTA-CAG---CTCCAGGC-AGG------TA-AT----------------AAG-TTGTATGTGTTTCA
gi|74967 : TATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GG-----------G-TTGTCTGTGTTT
gi|74968 : TATTA-CAG---CTCCATGC-AGT------GA-ATATC--GGCT--G-TAAAAG-T--TCTGTGTTTCA
gi|74969 : TCA-CTG---CTCCAGGC-AGG------TA-ATATC--GGCA--GATAGAAG-TTGTCCGTGTTTCA
gi|74970 : TTA-CAGGCGCTCCAGGCTAGG------TAGATATC--GGCT--GATAA--G-TTGTCTGTGCTTC
gi|74971 : CCAGGC-AGG------TA-ATATATGGGCT--GATAAAA----GTCTGTGTTTCA
blockSeqs : A GCG T TACATA G ATG TC T
blockSeqs : . . . . . C . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . G . .
blockSeqs : . . . . . T . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . C . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqs : . . . . .
blockSeqCons :
originalCons : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
finalCons : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
Alignments
lowQualScore : 1 222 1 444444 1 888 22 1
lowQualScore : . ... . ...... . ... .. .
lowQualScore : 7 999 6 666666 6 888 22 7
consensus : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
Reference ( family-732 ) : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74947 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74948 : TGTTATTA-CAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74949 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74950 : TGTTATTAACAG---CTTCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74951 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGTCTGTGTTTCA
gi|74952 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATAT-----AT---ATAAAGG-TTGACTGCGTTTCA
gi|74953 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATC--GGCT--GATAAAAG-TTGCCTGTGTTTCA
gi|74954 : TGTTATTA-CAG---CCCAAGGC-AGG------TA-ATATG--GGCTTCGATAAAAG-TTGTCTGTGTTTCA
gi|74955 : TGTTATTG-CAG---CTCCAGGC-AGG------TA-ATATC--GGTT--GATAAAAG-TTGTCTGTGTTT
gi|74956 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATATG--GACT--GATAAAAG-TTGTCTTTG
gi|74957 : TGTTATTA-CAA---CTCCAGGC-ATG------TA-ATATC--AGCT--GATAGAAG-TTGTCTGTGTTTCA
gi|74958 : TATTATTA-CAG---CTCCATGC-AGG------TA-ATATC--GGCT--GATACAAG-TTGCCTGTGTTTCA
gi|74959 : TGTTATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GGCT--GATAAATA-TTGTCTGTGTT
gi|74960 : TGTTATTA-CAG---CTCCAGAC-AGG------TA-ATATG--GGTT--GATAAA
gi|74961 : TGTTATTA-GAG---CTCCAGGC-AGG------T--ATATC--GGCT--GATAAAAGTTTGTCCTTGTTTCA
gi|74962 : TGTTATTA-CAG---CTCTAGGC-AGG------TA-ATATG--GGCC--GATAGAAG-
gi|74963 : TGTTATTA-CAG---CTCCTGGG-TGG------TA-ATACG--GGCT--GATAAAAG-TT
gi|74964 : TGTTATTA-CAG---CTCC-GGC-ACGTACATATA-ATATT--GGCT--GAATAAAG-T--TCTGTGTTTCA
gi|74965 : TGTAATTA-CAG---CTCCAGGC-----------------------T--GATAAAAG-TTGTCTGTATTTCA
gi|74966 : GTTATTA-CAG---CTCCAGGC-AGG------TA-AT----------------AAG-TTGTATGTGTTTCA
gi|74967 : TATTA-CAG---CTCCAGGC-AGG------TA-ATAT---GG-----------G-TTGTCTGTGTTT
gi|74968 : TATTA-CAG---CTCCATGC-AGT------GA-ATATC--GGCT--G-TAAAAG-T--TCTGTGTTTCA
gi|74969 : TCA-CTG---CTCCAGGC-AGG------TA-ATATC--GGCA--GATAGAAG-TTGTCCGTGTTTCA
gi|74970 : TTA-CAGGCGCTCCAGGCTAGG------TAGATATC--GGCT--GATAA--G-TTGTCTGTGCTTC
gi|74971 : CCAGGC-AGG------TA-ATATATGGGCT--GATAAAA----GTCTGTGTTTCA