lowQualScore : 11111111111111111 11111
lowQualScore : 1 1 22 1 333 22 1 22 1 22 1 1 1 44444 555 3 1 11111111111111111 0 1 1 3 0 22 555 11111
lowQualScore : . . .. . ... .. . .. . .. . . . ..... ... . . ................. . . . . . .. ... .....
lowQualScore : 9 8 55 8 000 33 7 33 7 22 6 6 6 00000 666 2 6 77777777777777777 5 7 7 3 7 44 777 22222
consensus : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
Reference ( gi|106700 ) : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106701 : TAG-GGA-T--A-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106702 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAT--TCGAAA---G-----ATTTTTTT
gi|106703 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTT-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCAAAT---G-----GTTTTTTT
gi|106704 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--ATC-AACTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----TTTTTT
gi|106705 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTT
gi|106706 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TTGAT-AGC-----TTT---AG-T-TAAA-----------------GACT-AT-T-CAATTAT--TCGAAC---GT----GTTTTTTT
gi|106707 : TAG-GGA-T--A-TCAAA---ATGAGT--AG-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CAAA-----------------GACT-AT-T-CGATTAT--TCGGGG---G-----
gi|106708 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTTT--T
gi|106709 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---TG-T-CAAA-----------------CAAT-AT-T-CGATTAT--TCGAAA---G-----GGTTTTTT
gi|106710 : TGG-GTA-T--G-TTAAA---ATGAAT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-ATC-----TTT---AG-T-CGAT-----------------GAAT-AT-T-CGATTGT--TCGAAA---G-----
gi|106711 : TAG-GGA-T--G-TCGAA---ATGAGT--AA-TT--T-TCTTA--GTC-GATTAT-ATGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGA
gi|106712 : TAG-GGA-T--G-CCAAA---ATGAGT--AA-AT--T-TATTA--GTC-GATTAT-TCGAC-AGA-----TCT---AG-T-CGAANNNNNNNNNNNNNNNNNNNNN-NN-N-NGAATAT--TCGAAA---G-----GTTTTTTT
gi|106713 : TAGTGGA-T--G-TCAA------GAGT--AA-ATGTT-TCTTA--GTCAGATTAT-TCAAT-AGC-----TTTTTAGG-T-CGAA-----------------GAAT-AT-TGCGA-TATCATTGAAA---GT----GTTTTTTT
gi|106715 : TAG-GGAGT--A-TCAAA---AT-AGA--AA-AT--T--CTTACTGTC-GATTATCTCGAT-GCC-----TTT---AG-T-CGAA-----------------GA---AT-T-CGA-TA---TCG-AA---G-----GTTTTT
gi|106714 : TAG-GGA-T--G-TCAAA---TCGAGT------T--T-TCTTA--GTC-GATTAT-TCAAT-AGC-----TTT---AG-T-C
gi|106716 : AG-GGG-T--G-TCAAA---ATGAGG--AA-TT--T-TTTTA--GTC-ATTTAT-TTGAT-AGCTTTAATTT---AG-T-CGAA-----------------GAAT-AT-T-TAATTAT--TCGAAA---
gi|106717 : AG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-T-GAT-A--------------------AA-----------------GAA--AT-TGCGA-TAT--TCCAAA---G-----GTTTTTTT
gi|106718 : G-GGA-T--GATCAAA---ATGAGT--AA-AT--TATCTTA--GTC-GTTCAT-TCGATTAGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAG--TCGAAA---GTA---GTTTTT
gi|106719 : G-GGA-T--G-TCAAATTTATG-----AA-AT--T-TCTTA--GTT-GACTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-TGATCGT--TTGAAA---G-----TTTTTTTT
gi|106720 : -GGA-TCGA-TCAAA---ATGAGT--AA-AT--T-TCTTA--A-C-AACTAT-TCGAT-AGC-----TTT----G-T-CGAA-----------------GAAT-AT-T-CGA-TA---TCGAAA---G-----TTTTTT
gi|106721 : -GGA-T--G-TCAAA---ATGAATTTAACAT--T-TCTTA---TC-GATTAT-TCGAT-AGC-----TTT---AGCT-CGAA-----------------G-AT-AT-T-CGATAGG--TCGAAAGG-G-----GTTTTTT
gi|106722 : GA-T--G-TCAAA---AATAGG--AA-AT--T-TTCTA--GTC-AATTAT--CATT-GGC-----CTTCTTAGATACGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTT
gi|106723 : AA---ATCAAT--AA--T--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TAT---TG-T-CGAA-----------------GAAT-AC-T-CTTTTAT--T-GAAA---G-----TTTTT
gi|106724 : AGT--AA-AT--T-TCTTA--GTC-GATTAG-TCGAT--GC-----TTT---AG-T-CGAA-----------------GACTGAT-T-CGATTAT--TCGAAA---GTGTTTGTTTTTTT
gi|106725 : TTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-ATGT-CGATTAT--TCGAAAATGG-----GTTTTTTT
Alignments
lowQualScore : 11111111111111111 11111
lowQualScore : 1 1 22 1 222 22 1 22 1 22 1 1 1 33333 555 3 1 11111111111111111 0 1 1 3 0 22 555 00000
lowQualScore : . . .. . ... .. . .. . .. . . . ..... ... . . ................. . . . . . .. ... .....
lowQualScore : 8 7 44 7 999 22 6 22 6 11 5 5 5 88888 444 1 5 22222222222222222 1 6 6 2 2 33 444 77777
consensus : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
Reference ( family-710 ) : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106700 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106701 : TAG-GGA-T--A-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106702 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAT--TCGAAA---G-----ATTTTTTT
gi|106703 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTT-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCAAAT---G-----GTTTTTTT
gi|106704 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--ATC-AACTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----TTTTTT
gi|106705 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTT
gi|106706 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TTGAT-AGC-----TTT---AG-T-TAAA-----------------GACT-AT-T-CAATTAT--TCGAAC---GT----GTTTTTTT
gi|106707 : TAG-GGA-T--A-TCAAA---ATGAGT--AG-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CAAA-----------------GACT-AT-T-CGATTAT--TCGGGG---G-----
gi|106708 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTTT--T
gi|106709 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---TG-T-CAAA-----------------CAAT-AT-T-CGATTAT--TCGAAA---G-----GGTTTTTT
gi|106710 : TGG-GTA-T--G-TTAAA---ATGAAT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-ATC-----TTT---AG-T-CGAT-----------------GAAT-AT-T-CGATTGT--TCGAAA---G-----
gi|106711 : TAG-GGA-T--G-TCGAA---ATGAGT--AA-TT--T-TCTTA--GTC-GATTAT-ATGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGA
gi|106712 : TAG-GGA-T--G-CCAAA---ATGAGT--AA-AT--T-TATTA--GTC-GATTAT-TCGAC-AGA-----TCT---AG-T-CGAANNNNNNNNNNNNNNNNNNNNN-NN-N-NGAATAT--TCGAAA---G-----GTTTTTTT
gi|106713 : TAGTGGA-T--G-TCAA------GAGT--AA-ATGTT-TCTTA--GTCAGATTAT-TCAAT-AGC-----TTTTTAGG-T-CGAA-----------------GAAT-AT-TGCGA-TATCATTGAAA---GT----GTTTTTTT
gi|106714 : TAG-GGA-T--G-TCAAA---TCGAGT------T--T-TCTTA--GTC-GATTAT-TCAAT-AGC-----TTT---AG-T-C
gi|106715 : TAG-GGAGT--A-TCAAA---AT-AGA--AA-AT--T--CTTACTGTC-GATTATCTCGAT-GCC-----TTT---AG-T-CGAA-----------------GA---AT-T-CGA-TA---TCG-AA---G-----GTTTTT
gi|106716 : AG-GGG-T--G-TCAAA---ATGAGG--AA-TT--T-TTTTA--GTC-ATTTAT-TTGAT-AGCTTTAATTT---AG-T-CGAA-----------------GAAT-AT-T-TAATTAT--TCGAAA---
gi|106717 : AG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-T-GAT-A--------------------AA-----------------GAA--AT-TGCGA-TAT--TCCAAA---G-----GTTTTTTT
gi|106718 : G-GGA-T--GATCAAA---ATGAGT--AA-AT--TATCTTA--GTC-GTTCAT-TCGATTAGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAG--TCGAAA---GTA---GTTTTT
gi|106719 : G-GGA-T--G-TCAAATTTATG-----AA-AT--T-TCTTA--GTT-GACTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-TGATCGT--TTGAAA---G-----TTTTTTTT
gi|106720 : -GGA-TCGA-TCAAA---ATGAGT--AA-AT--T-TCTTA--A-C-AACTAT-TCGAT-AGC-----TTT----G-T-CGAA-----------------GAAT-AT-T-CGA-TA---TCGAAA---G-----TTTTTT
gi|106721 : -GGA-T--G-TCAAA---ATGAATTTAACAT--T-TCTTA---TC-GATTAT-TCGAT-AGC-----TTT---AGCT-CGAA-----------------G-AT-AT-T-CGATAGG--TCGAAAGG-G-----GTTTTTT
gi|106722 : GA-T--G-TCAAA---AATAGG--AA-AT--T-TTCTA--GTC-AATTAT--CATT-GGC-----CTTCTTAGATACGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTT
gi|106723 : AA---ATCAAT--AA--T--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TAT---TG-T-CGAA-----------------GAAT-AC-T-CTTTTAT--T-GAAA---G-----TTTTT
gi|106724 : AGT--AA-AT--T-TCTTA--GTC-GATTAG-TCGAT--GC-----TTT---AG-T-CGAA-----------------GACTGAT-T-CGATTAT--TCGAAA---GTGTTTGTTTTTTT
gi|106725 : TTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-ATGT-CGATTAT--TCGAAAATGG-----GTTTTTTT
Alignments
lowQualScore : 11111111111111111 11111
lowQualScore : 1 1 22 1 222 22 1 22 1 22 1 1 1 33333 555 3 1 11111111111111111 0 1 1 3 0 22 555 00000
lowQualScore : . . .. . ... .. . .. . .. . . . ..... ... . . ................. . . . . . .. ... .....
lowQualScore : 8 7 44 7 999 22 6 22 6 11 5 5 5 88888 444 1 5 22222222222222222 1 6 6 2 2 33 444 77777
consensus : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
Reference ( family-710 ) : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106700 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106701 : TAG-GGA-T--A-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106702 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAT--TCGAAA---G-----ATTTTTTT
gi|106703 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTT-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCAAAT---G-----GTTTTTTT
gi|106704 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--ATC-AACTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----TTTTTT
gi|106705 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTT
gi|106706 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TTGAT-AGC-----TTT---AG-T-TAAA-----------------GACT-AT-T-CAATTAT--TCGAAC---GT----GTTTTTTT
gi|106707 : TAG-GGA-T--A-TCAAA---ATGAGT--AG-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CAAA-----------------GACT-AT-T-CGATTAT--TCGGGG---G-----
gi|106708 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTTT--T
gi|106709 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---TG-T-CAAA-----------------CAAT-AT-T-CGATTAT--TCGAAA---G-----GGTTTTTT
gi|106710 : TGG-GTA-T--G-TTAAA---ATGAAT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-ATC-----TTT---AG-T-CGAT-----------------GAAT-AT-T-CGATTGT--TCGAAA---G-----
gi|106711 : TAG-GGA-T--G-TCGAA---ATGAGT--AA-TT--T-TCTTA--GTC-GATTAT-ATGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGA
gi|106712 : TAG-GGA-T--G-CCAAA---ATGAGT--AA-AT--T-TATTA--GTC-GATTAT-TCGAC-AGA-----TCT---AG-T-CGAANNNNNNNNNNNNNNNNNNNNN-NN-N-NGAATAT--TCGAAA---G-----GTTTTTTT
gi|106713 : TAGTGGA-T--G-TCAA------GAGT--AA-ATGTT-TCTTA--GTCAGATTAT-TCAAT-AGC-----TTTTTAGG-T-CGAA-----------------GAAT-AT-TGCGA-TATCATTGAAA---GT----GTTTTTTT
gi|106714 : TAG-GGA-T--G-TCAAA---TCGAGT------T--T-TCTTA--GTC-GATTAT-TCAAT-AGC-----TTT---AG-T-C
gi|106715 : TAG-GGAGT--A-TCAAA---AT-AGA--AA-AT--T--CTTACTGTC-GATTATCTCGAT-GCC-----TTT---AG-T-CGAA-----------------GA---AT-T-CGA-TA---TCG-AA---G-----GTTTTT
gi|106716 : AG-GGG-T--G-TCAAA---ATGAGG--AA-TT--T-TTTTA--GTC-ATTTAT-TTGAT-AGCTTTAATTT---AG-T-CGAA-----------------GAAT-AT-T-TAATTAT--TCGAAA---
gi|106717 : AG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-T-GAT-A--------------------AA-----------------GAA--AT-TGCGA-TAT--TCCAAA---G-----GTTTTTTT
gi|106718 : G-GGA-T--GATCAAA---ATGAGT--AA-AT--TATCTTA--GTC-GTTCAT-TCGATTAGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAG--TCGAAA---GTA---GTTTTT
gi|106719 : G-GGA-T--G-TCAAATTTATG-----AA-AT--T-TCTTA--GTT-GACTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-TGATCGT--TTGAAA---G-----TTTTTTTT
gi|106720 : -GGA-TCGA-TCAAA---ATGAGT--AA-AT--T-TCTTA--A-C-AACTAT-TCGAT-AGC-----TTT----G-T-CGAA-----------------GAAT-AT-T-CGA-TA---TCGAAA---G-----TTTTTT
gi|106721 : -GGA-T--G-TCAAA---ATGAATTTAACAT--T-TCTTA---TC-GATTAT-TCGAT-AGC-----TTT---AGCT-CGAA-----------------G-AT-AT-T-CGATAGG--TCGAAAGG-G-----GTTTTTT
gi|106722 : GA-T--G-TCAAA---AATAGG--AA-AT--T-TTCTA--GTC-AATTAT--CATT-GGC-----CTTCTTAGATACGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTT
gi|106723 : AA---ATCAAT--AA--T--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TAT---TG-T-CGAA-----------------GAAT-AC-T-CTTTTAT--T-GAAA---G-----TTTTT
gi|106724 : AGT--AA-AT--T-TCTTA--GTC-GATTAG-TCGAT--GC-----TTT---AG-T-CGAA-----------------GACTGAT-T-CGATTAT--TCGAAA---GTGTTTGTTTTTTT
gi|106725 : TTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-ATGT-CGATTAT--TCGAAAATGG-----GTTTTTTT
blockSeqs : T G CG A TTT TT C GT A CT A C T TTTAA TTA C A NNNNNNNNNNNNNNNNN G G G CA ATG TGTTT
blockSeqs : . . . . . . . . . . . . . . CTT A . . . . G . GG TA
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . T
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqCons :
originalCons : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
finalCons : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
Alignments
lowQualScore : 11111111111111111 11111
lowQualScore : 1 1 22 1 222 22 1 22 1 22 1 1 1 33333 555 3 1 11111111111111111 0 1 1 3 0 22 555 00000
lowQualScore : . . .. . ... .. . .. . .. . . . ..... ... . . ................. . . . . . .. ... .....
lowQualScore : 8 7 44 7 999 22 6 22 6 11 5 5 5 88888 444 1 5 22222222222222222 1 6 6 2 2 33 444 77777
consensus : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
Reference ( family-710 ) : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106700 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106701 : TAG-GGA-T--A-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTTT
gi|106702 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAT--TCGAAA---G-----ATTTTTTT
gi|106703 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTT-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCAAAT---G-----GTTTTTTT
gi|106704 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--ATC-AACTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----TTTTTT
gi|106705 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTT
gi|106706 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TTGAT-AGC-----TTT---AG-T-TAAA-----------------GACT-AT-T-CAATTAT--TCGAAC---GT----GTTTTTTT
gi|106707 : TAG-GGA-T--A-TCAAA---ATGAGT--AG-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CAAA-----------------GACT-AT-T-CGATTAT--TCGGGG---G-----
gi|106708 : TAG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTTT--T
gi|106709 : TAG-GGA-T--G-TCAAA---ATAGGA--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-GCC-----TTT---TG-T-CAAA-----------------CAAT-AT-T-CGATTAT--TCGAAA---G-----GGTTTTTT
gi|106710 : TGG-GTA-T--G-TTAAA---ATGAAT--AA-AT--T-TCTTA--GTC-GATTAT-TCGAT-ATC-----TTT---AG-T-CGAT-----------------GAAT-AT-T-CGATTGT--TCGAAA---G-----
gi|106711 : TAG-GGA-T--G-TCGAA---ATGAGT--AA-TT--T-TCTTA--GTC-GATTAT-ATGAT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-CGA
gi|106712 : TAG-GGA-T--G-CCAAA---ATGAGT--AA-AT--T-TATTA--GTC-GATTAT-TCGAC-AGA-----TCT---AG-T-CGAANNNNNNNNNNNNNNNNNNNNN-NN-N-NGAATAT--TCGAAA---G-----GTTTTTTT
gi|106713 : TAGTGGA-T--G-TCAA------GAGT--AA-ATGTT-TCTTA--GTCAGATTAT-TCAAT-AGC-----TTTTTAGG-T-CGAA-----------------GAAT-AT-TGCGA-TATCATTGAAA---GT----GTTTTTTT
gi|106714 : TAG-GGA-T--G-TCAAA---TCGAGT------T--T-TCTTA--GTC-GATTAT-TCAAT-AGC-----TTT---AG-T-C
gi|106715 : TAG-GGAGT--A-TCAAA---AT-AGA--AA-AT--T--CTTACTGTC-GATTATCTCGAT-GCC-----TTT---AG-T-CGAA-----------------GA---AT-T-CGA-TA---TCG-AA---G-----GTTTTT
gi|106716 : AG-GGG-T--G-TCAAA---ATGAGG--AA-TT--T-TTTTA--GTC-ATTTAT-TTGAT-AGCTTTAATTT---AG-T-CGAA-----------------GAAT-AT-T-TAATTAT--TCGAAA---
gi|106717 : AG-GGA-T--G-TCAAA---ATGAGT--AA-AT--T-TCTTA--GTC-GATTAT-T-GAT-A--------------------AA-----------------GAA--AT-TGCGA-TAT--TCCAAA---G-----GTTTTTTT
gi|106718 : G-GGA-T--GATCAAA---ATGAGT--AA-AT--TATCTTA--GTC-GTTCAT-TCGATTAGC-----TTT---AG-T-CGAA-----------------GACT-AT-T-CGATTAG--TCGAAA---GTA---GTTTTT
gi|106719 : G-GGA-T--G-TCAAATTTATG-----AA-AT--T-TCTTA--GTT-GACTAT-TCGGT-AGC-----TTT---AG-T-CGAA-----------------GAAT-AT-T-TGATCGT--TTGAAA---G-----TTTTTTTT
gi|106720 : -GGA-TCGA-TCAAA---ATGAGT--AA-AT--T-TCTTA--A-C-AACTAT-TCGAT-AGC-----TTT----G-T-CGAA-----------------GAAT-AT-T-CGA-TA---TCGAAA---G-----TTTTTT
gi|106721 : -GGA-T--G-TCAAA---ATGAATTTAACAT--T-TCTTA---TC-GATTAT-TCGAT-AGC-----TTT---AGCT-CGAA-----------------G-AT-AT-T-CGATAGG--TCGAAAGG-G-----GTTTTTT
gi|106722 : GA-T--G-TCAAA---AATAGG--AA-AT--T-TTCTA--GTC-AATTAT--CATT-GGC-----CTTCTTAGATACGAA-----------------GAAT-AT-T-CGATTAT--TCGAAA---G-----GTTTTTT
gi|106723 : AA---ATCAAT--AA--T--T-TCTTA--GTC-GATTAT-TCGAT-AGC-----TAT---TG-T-CGAA-----------------GAAT-AC-T-CTTTTAT--T-GAAA---G-----TTTTT
gi|106724 : AGT--AA-AT--T-TCTTA--GTC-GATTAG-TCGAT--GC-----TTT---AG-T-CGAA-----------------GACTGAT-T-CGATTAT--TCGAAA---GTGTTTGTTTTTTT
gi|106725 : TTA--GTC-GATTAT-TCGAT-AGC-----TTT---AG-T-CGAA-----------------GACT-ATGT-CGATTAT--TCGAAAATGG-----GTTTTTTT