lowQualScore : 111
lowQualScore : 5 1 99 4 9 1 77 3 4 1 1 777 5555 4 1 44 22 3333 22 22 2
lowQualScore : . . .. . . . .. . . . . ... .... . . .. .. .... .. .. .
lowQualScore : 0 7 00 8 6 6 00 2 8 6 6 000 0000 8 6 44 55 9999 55 99 2
consensus : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTG-A-CGGA----CTC-CGT-GCCAG--TCAGAAA----TTTCTT--TCTCCACCT--ACGAA-CTGTCCCA
Reference ( gi|114717 ) : TACAGTC-ACA-GGTCGGCT-A-GATT-TT-G--C-TG-C-AT-CTTTG-C-CGGA----CTC-TGT-GCTAG--TCAGAAA----TTTCTT--TCTCCACCT--ACGAA-CTGTCTCA
gi|114718 : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTA-AACGGA----CTC-TGT-GCCAG--TCAGAAA----TTTCTT--TCTCCACCT--AAGAA-CTGTCTCA
gi|114721 : TACTGTC-ACA-GGTTGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTG-C-CAGA----CTC-TGT-GCTAG--TCAGAAA----TGTCTT--TCCCCACCT--ATGCA-CTATCTCA
gi|114719 : TACAGTC-ACA-GGTCGGTC-A-GATT-TT-G--C-TC-C-AT-CTATG-A-CGAA----CTC-TGT-GTCAG--TCAGAAA----TTTCTT--TCTTCACCT--ACGAA-CTGTCTCA
gi|114722 : TATAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTG-A-CTGA----CTC-TGT-GCCAG--TCA-ATT----TTTTTT--TCTCCACCT--ACGAA-CTGTCTCA
gi|114720 : TACAATC-ACA-GGTCTGCCCA-GATT-TT-G--C-CG-C-AT-CTTTG-A-CGGA----GTC-CGT-GCCAG--TCAGAGA----TTTCTT--TTTCCACCT--ATGAA-CTGTCCCA
gi|114726 : TACAGTC-ACA-GGTCGGCA-A-GATT-TT-G--C-TG-C-AT-CTTTG-A-CGGA----CTT-TGT-GCCGG--TCA-ATA----T---TT--TTTCCAGCT--ACGAA-CTGTCTCA
gi|114724 : TACAGTC-ACA-GGTTCACC-A-AATT-TT-G--CAGG-C-AT-CTTCG-A-CGGA----CTC-CGT-GCCAG--TCAGAAA----TTACTT--TCTCCACCT--ATGAA-CTGTCCCA
gi|114723 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-G--C-CG-C-AT-CTTCG-A-CGGA----CTC-TGT-GCCAC--TCAGATA----TTTTGT--TCTCCACCT--ATGAA-CTGTCCCA
gi|114725 : TGCAGTC-ACA-AG---GCC-A-GATT-TT-G--C-CG-C-AT-CTTGG-A-CGGA----CTT-CGT-GTCCG--TCAGAAA----TTTCTT--TCTCCACCT--ATGAA-CTGTCCCA
gi|114727 : TACAGTC-ACA-GGTTGGCC-A-GATTGTT-G--C-TG-CCAT-CTTTG-A-CGGA----CGC-TGT-GCCAG--TCAGAAA----TGTCTT--TC-CCA-CT--ACAAACCTGT
gi|114728 : TACAGTC-ACA-GGGCGGTC-A-GA-------------------CTTTG-A-CGGA----CTC-TGT-GCCAG--TCAGAAA----TTT-TT--TTTCCACCT--GCGAA-CTGTCTCAtc
gi|114731 : TACATTT-ACA-GGTCAACTTA-GATC-TT-G--C-TG-C-AT-CGTTG-C-CGGA----CTC-CGT-GACAT--TCAGAAA----TTTATT--TCTCCACCT--
gi|114729 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-TTCC-TA-A-AG--TTCG-A-CGGAA---CTC-CGT-GCCAG--TCAGAAA----TTTCTT--TCTCCA-CT--ATGAA-CTGTTCCAgtaaa
gi|114730 : TACAGTC-ACA-GGTCCATC-A-GATTCTT-G--CCTA-A-AT-GTTCA-A-CGGAATCACTC--GTCGCTAG--T--AAAA----TTTCTT--TCTCCACCT--ATGAA-CTGTCCCA
gi|114732 : TATAGTC-ACAAGGTCCATC-A-GATT-TTTG--C-CG-A-AT-GTTCG-A-CGGA----CTC-CGT-GGCAG--TCAGAAA----ATT-TT--TCTCCACCT--ATTAA-
gi|114736 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGAC-CAGA----CTCTTTT-GCT----TTACAGA----TTTCTC--TCTCC
gi|114735 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGAC-CAGA----CTCTTTT-GCT----TTACAGA----TTTCTC--TCTCCcagccatgttgttcca
gi|114734 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGAC-CAGA----CTCTTTT-GCT----TTACAGA----TTTCTC--TCTCCcagccatgttgttcca
gi|114733 : TACAGT--ACA-GTTCTATC-A-AAGTGTT-G--C--G-C-AT-CT----CACGGA----CTC-CGG-GC--A--TCAGAAA----TTTCTT--TCT-AACCT--ATGAA-CTGTCCCAcagccatgttgttcca
gi|114739 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTG-A-CAGA----CTC-TGT-GC
gi|114738 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTG-A-CAGA----CTC-TGT-GC
gi|114737 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTG-A-CAGA----CTC-TGT-GC
gi|114740 : CAGTC-ACA-TGTTGGCC-A-GATT-TT-G--C-TA-C-AT-CTTTT-A-CGGA----CTC-TGT-GCTAG--TCCGAAA----TTTCTT--TCTCCATCT--ACAAA-CTGTCTCA
gi|114741 : -ACA-G-TTGGCC-A-GATT-TT-G--C-AG-A-ATTCATTG-A-CGGA----CTC-TGT-GCCAGATTCAGAAAAAGTTTTCATAGTCTCCACCTTAACGAA-CTG
gi|114742 : -A-GATA-TT-G--C-TG-T-AT-CATTG-A-CAGA----ATC-TGT-GCGAG--TCAGAAA----TTTCTT--TCTCCACCT--ACGAA-CTGTCTCA
Alignments
lowQualScore : 4 1 3 4 9 1 66 3 4 1 1 6 1 8888 1 0 22 3333 22 5 22 1
lowQualScore : . . . . . . .. . . . . . . .... . . .. .... .. . .. .
lowQualScore : 8 6 1 6 2 5 77 1 6 5 5 2 5 4444 5 1 44 7777 44 2 44 8
consensus : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
Reference ( family-700 ) : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
gi|114717 : TACAGTC-ACA-GGTCGGCT-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CGGA-CTC---TGT-GCTAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114718 : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTAAACGGA-CTC---TGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--AAGAA-CTGTCTCA
gi|114719 : TACAGTC-ACA-GGTCGGTC-A-GATT-TT-G--C-TC-C-AT-CTATGA-CGAA-CTC---TGT-GTCAG--TCAGAAA----TTTCTT--TCT-TCACCT--ACGAA-CTGTCTCA
gi|114720 : TACAATC-ACA-GGTCTGCCCA-GATT-TT-G--C-CG-C-AT-CTTTGA-CGGA-GTC---CGT-GCCAG--TCAGAGA----TTTCTT--TTT-CCACCT--ATGAA-CTGTCCCA
gi|114721 : TACTGTC-ACA-GGTTGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CAGA-CTC---TGT-GCTAG--TCAGAAA----TGTCTT--TCC-CCACCT--ATGCA-CTATCTCA
gi|114722 : TATAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CTGA-CTC---TGT-GCCAG--TCA-ATT----TTTTTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114723 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-G--C-CG-C-AT-CTTCGA-CGGA-CTC---TGT-GCCAC--TCAGATA----TTTTGT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114724 : TACAGTC-ACA-GGTTCACC-A-AATT-TT-G--CAGG-C-AT-CTTCGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTACTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114725 : TGCAGTC-ACA-AG---GCC-A-GATT-TT-G--C-CG-C-AT-CTTGGA-CGGA-CTT---CGT-GTCCG--TCAGAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114726 : TACAGTC-ACA-GGTCGGCA-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTT---TGT-GCCGG--TCA-ATA----T---TT--TTT-CCAGCT--ACGAA-CTGTCTCA
gi|114727 : TACAGTC-ACA-GGTTGGCC-A-GATTGTT-G--C-TG-CCAT-CTTTGA-CGGA-CGC---TGT-GCCAG--TCAGAAA----TGTCTT--TC--CCA-CT--ACAAACCTGTTC
gi|114728 : TACAGTC-ACA-GGGCGGTC-A-GA-------------------CTTTGA-CGGA-CTC---TGT-GCCAG--TCAGAAA----TTT-TT--TTT-CCACCT--GCGAA-CTGTCTCA
gi|114729 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-TTCC-TA-A-AG--TTCGA-CGGAACTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCA-CT--ATGAA-CTGTTCCA
gi|114730 : TACAGTC-ACA-GGTCCATC-A-GATTCTT-G--CCTA-A-AT-GTTCAA-CGGA-ATCACTCGTCGCTAG--T--AAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114731 : TACATTT-ACA-GGTCAACTTA-GATC-TT-G--C-TG-C-AT-CGTTGC-CGGA-CTC---CGT-GACAT--TCAGAAA----TTTATT--TCT-CCACCT--
gi|114732 : TATAGTC-ACAAGGTCCATC-A-GATT-TTTG--C-CG-A-AT-GTTCGA-CGGA-CTC---CGT-GGCAG--TCAGAAA----ATT-TT--TCT-CCACCT--ATTAA-gtaaa
gi|114733 : TACAGT--ACA-GTTCTATC-A-AAGTGTT-G--C--G-C-AT-CTC--A-CGGA-CTC---CGG-GC--A--TCAGAAA----TTTCTT--TCT--AACCT--ATGAA-CTGTCCCA
gi|114734 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114735 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114736 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114737 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114738 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114739 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114740 : CAGTC-ACA-TGTTGGCC-A-GATT-TT-G--C-TA-C-AT-CTTTTA-CGGA-CTC---TGT-GCTAG--TCCGAAA----TTTCTT--TCT-CCATCT--ACAAA-CTGTCTCA
gi|114741 : -ACA-G-TTGGCC-A-GATT-TT-G--C-AG-A-ATTCATTGA-CGGA-CTC---TGT-GCCAGATTCAGAAAAAGTTTTCATAGTCT-CCACCTTAACGAA-CTG
gi|114742 : -A-GATA-TT-G--C-TG-T-AT-CATTGA-CAGA-ATC---TGT-GCGAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA
Alignments
lowQualScore : 4 1 3 4 9 1 66 3 4 1 1 6 1 8888 1 0 22 3333 22 5 22 1
lowQualScore : . . . . . . .. . . . . . . .... . . .. .... .. . .. .
lowQualScore : 8 6 1 6 2 5 77 1 6 5 5 2 5 4444 5 1 44 7777 44 2 44 8
consensus : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
Reference ( family-700 ) : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
gi|114717 : TACAGTC-ACA-GGTCGGCT-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CGGA-CTC---TGT-GCTAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114718 : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTAAACGGA-CTC---TGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--AAGAA-CTGTCTCA
gi|114719 : TACAGTC-ACA-GGTCGGTC-A-GATT-TT-G--C-TC-C-AT-CTATGA-CGAA-CTC---TGT-GTCAG--TCAGAAA----TTTCTT--TCT-TCACCT--ACGAA-CTGTCTCA
gi|114720 : TACAATC-ACA-GGTCTGCCCA-GATT-TT-G--C-CG-C-AT-CTTTGA-CGGA-GTC---CGT-GCCAG--TCAGAGA----TTTCTT--TTT-CCACCT--ATGAA-CTGTCCCA
gi|114721 : TACTGTC-ACA-GGTTGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CAGA-CTC---TGT-GCTAG--TCAGAAA----TGTCTT--TCC-CCACCT--ATGCA-CTATCTCA
gi|114722 : TATAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CTGA-CTC---TGT-GCCAG--TCA-ATT----TTTTTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114723 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-G--C-CG-C-AT-CTTCGA-CGGA-CTC---TGT-GCCAC--TCAGATA----TTTTGT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114724 : TACAGTC-ACA-GGTTCACC-A-AATT-TT-G--CAGG-C-AT-CTTCGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTACTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114725 : TGCAGTC-ACA-AG---GCC-A-GATT-TT-G--C-CG-C-AT-CTTGGA-CGGA-CTT---CGT-GTCCG--TCAGAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114726 : TACAGTC-ACA-GGTCGGCA-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTT---TGT-GCCGG--TCA-ATA----T---TT--TTT-CCAGCT--ACGAA-CTGTCTCA
gi|114727 : TACAGTC-ACA-GGTTGGCC-A-GATTGTT-G--C-TG-CCAT-CTTTGA-CGGA-CGC---TGT-GCCAG--TCAGAAA----TGTCTT--TC--CCA-CT--ACAAACCTGTTC
gi|114728 : TACAGTC-ACA-GGGCGGTC-A-GA-------------------CTTTGA-CGGA-CTC---TGT-GCCAG--TCAGAAA----TTT-TT--TTT-CCACCT--GCGAA-CTGTCTCA
gi|114729 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-TTCC-TA-A-AG--TTCGA-CGGAACTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCA-CT--ATGAA-CTGTTCCA
gi|114730 : TACAGTC-ACA-GGTCCATC-A-GATTCTT-G--CCTA-A-AT-GTTCAA-CGGA-ATCACTCGTCGCTAG--T--AAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114731 : TACATTT-ACA-GGTCAACTTA-GATC-TT-G--C-TG-C-AT-CGTTGC-CGGA-CTC---CGT-GACAT--TCAGAAA----TTTATT--TCT-CCACCT--
gi|114732 : TATAGTC-ACAAGGTCCATC-A-GATT-TTTG--C-CG-A-AT-GTTCGA-CGGA-CTC---CGT-GGCAG--TCAGAAA----ATT-TT--TCT-CCACCT--ATTAA-gtaaa
gi|114733 : TACAGT--ACA-GTTCTATC-A-AAGTGTT-G--C--G-C-AT-CTC--A-CGGA-CTC---CGG-GC--A--TCAGAAA----TTTCTT--TCT--AACCT--ATGAA-CTGTCCCA
gi|114734 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114735 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114736 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114737 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114738 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114739 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114740 : CAGTC-ACA-TGTTGGCC-A-GATT-TT-G--C-TA-C-AT-CTTTTA-CGGA-CTC---TGT-GCTAG--TCCGAAA----TTTCTT--TCT-CCATCT--ACAAA-CTGTCTCA
gi|114741 : -ACA-G-TTGGCC-A-GATT-TT-G--C-AG-A-ATTCATTGA-CGGA-CTC---TGT-GCCAGATTCAGAAAAAGTTTTCATAGTCT-CCACCTTAACGAA-CTG
gi|114742 : -A-GATA-TT-G--C-TG-T-AT-CATTGA-CAGA-ATC---TGT-GCGAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA
blockSeqs : T A C A G T TC A C C T A A ACTC C AT AAGT AG C TA C
blockSeqs : T . T A C . G C C . . C . TT . . . . C . .
blockSeqs : T . . A G . G . C . . C . TT . . . . C . .
blockSeqs : . . . . G . G . . . . C . TT . . . . . . .
blockSeqs : . . . . G . . . . . . . . T . . . . . . .
blockSeqs : . . . . G . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . T .
blockSeqs : . . . . . . . . . . . . . T .
blockSeqs : . . . . . . . . . . . T .
blockSeqCons :
originalCons : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
finalCons : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
Alignments
lowQualScore : 4 1 3 4 9 1 66 3 4 1 1 6 1 8888 1 0 22 3333 22 5 22 1
lowQualScore : . . . . . . .. . . . . . . .... . . .. .... .. . .. .
lowQualScore : 8 6 1 6 2 5 77 1 6 5 5 2 5 4444 5 1 44 7777 44 2 44 8
consensus : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
Reference ( family-700 ) : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCCCA
gi|114717 : TACAGTC-ACA-GGTCGGCT-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CGGA-CTC---TGT-GCTAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114718 : TACAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTAAACGGA-CTC---TGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCACCT--AAGAA-CTGTCTCA
gi|114719 : TACAGTC-ACA-GGTCGGTC-A-GATT-TT-G--C-TC-C-AT-CTATGA-CGAA-CTC---TGT-GTCAG--TCAGAAA----TTTCTT--TCT-TCACCT--ACGAA-CTGTCTCA
gi|114720 : TACAATC-ACA-GGTCTGCCCA-GATT-TT-G--C-CG-C-AT-CTTTGA-CGGA-GTC---CGT-GCCAG--TCAGAGA----TTTCTT--TTT-CCACCT--ATGAA-CTGTCCCA
gi|114721 : TACTGTC-ACA-GGTTGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGC-CAGA-CTC---TGT-GCTAG--TCAGAAA----TGTCTT--TCC-CCACCT--ATGCA-CTATCTCA
gi|114722 : TATAGTC-ACA-GGTCGGCC-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CTGA-CTC---TGT-GCCAG--TCA-ATT----TTTTTT--TCT-CCACCT--ACGAA-CTGTCTCA
gi|114723 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-G--C-CG-C-AT-CTTCGA-CGGA-CTC---TGT-GCCAC--TCAGATA----TTTTGT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114724 : TACAGTC-ACA-GGTTCACC-A-AATT-TT-G--CAGG-C-AT-CTTCGA-CGGA-CTC---CGT-GCCAG--TCAGAAA----TTACTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114725 : TGCAGTC-ACA-AG---GCC-A-GATT-TT-G--C-CG-C-AT-CTTGGA-CGGA-CTT---CGT-GTCCG--TCAGAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114726 : TACAGTC-ACA-GGTCGGCA-A-GATT-TT-G--C-TG-C-AT-CTTTGA-CGGA-CTT---TGT-GCCGG--TCA-ATA----T---TT--TTT-CCAGCT--ACGAA-CTGTCTCA
gi|114727 : TACAGTC-ACA-GGTTGGCC-A-GATTGTT-G--C-TG-CCAT-CTTTGA-CGGA-CGC---TGT-GCCAG--TCAGAAA----TGTCTT--TC--CCA-CT--ACAAACCTGTTC
gi|114728 : TACAGTC-ACA-GGGCGGTC-A-GA-------------------CTTTGA-CGGA-CTC---TGT-GCCAG--TCAGAAA----TTT-TT--TTT-CCACCT--GCGAA-CTGTCTCA
gi|114729 : TACAGTC-ACA-GGTCCATC-A-GATT-TT-TTCC-TA-A-AG--TTCGA-CGGAACTC---CGT-GCCAG--TCAGAAA----TTTCTT--TCT-CCA-CT--ATGAA-CTGTTCCA
gi|114730 : TACAGTC-ACA-GGTCCATC-A-GATTCTT-G--CCTA-A-AT-GTTCAA-CGGA-ATCACTCGTCGCTAG--T--AAAA----TTTCTT--TCT-CCACCT--ATGAA-CTGTCCCA
gi|114731 : TACATTT-ACA-GGTCAACTTA-GATC-TT-G--C-TG-C-AT-CGTTGC-CGGA-CTC---CGT-GACAT--TCAGAAA----TTTATT--TCT-CCACCT--
gi|114732 : TATAGTC-ACAAGGTCCATC-A-GATT-TTTG--C-CG-A-AT-GTTCGA-CGGA-CTC---CGT-GGCAG--TCAGAAA----ATT-TT--TCT-CCACCT--ATTAA-gtaaa
gi|114733 : TACAGT--ACA-GTTCTATC-A-AAGTGTT-G--C--G-C-AT-CTC--A-CGGA-CTC---CGG-GC--A--TCAGAAA----TTTCTT--TCT--AACCT--ATGAA-CTGTCCCA
gi|114734 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114735 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114736 : TACAATTTACA-GGTCGGCC-A-GATTGTT-G--C-TGCC-AT-CTTTGACCAGA-CTCT--TTT-GCT----TTACAGA----TTTCTC--TCTCCCAGCC--ATG---TTGTTCCA
gi|114737 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114738 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114739 : TACACTC-ACA-AGTCGGCC-AAGATT-GT-GG-C-TG-C-AT-CTTTGA-CAGA-CTC---TGT-GC
gi|114740 : CAGTC-ACA-TGTTGGCC-A-GATT-TT-G--C-TA-C-AT-CTTTTA-CGGA-CTC---TGT-GCTAG--TCCGAAA----TTTCTT--TCT-CCATCT--ACAAA-CTGTCTCA
gi|114741 : -ACA-G-TTGGCC-A-GATT-TT-G--C-AG-A-ATTCATTGA-CGGA-CTC---TGT-GCCAGATTCAGAAAAAGTTTTCATAGTCT-CCACCTTAACGAA-CTG
gi|114742 : -A-GATA-TT-G--C-TG-T-AT-CATTGA-CAGA-ATC---TGT-GCGAG--TCAGAAA----TTTCTT--TCT-CCACCT--ACGAA-CTGTCTCA