lowQualScore                  :                                          111                                         
lowQualScore                  :        1          3333   1  1     8888   444    22 44  44 3      5   1 1          0  
lowQualScore                  :        .          ....   .  .     ....   ...    .. ..  .. .      .   . .          .  
lowQualScore                  :        7          5555   7  7     3333   777    00 00  00 2      2   7 7          5  
consensus                     :    TATT-GACTGGGGTC----GAG-GG-CAACA-T-TGATT-NTGTT-AG-NCC--CGAGGGAC-GAA-A-TGTTGCCCGACGC
Reference ( gi|34631 )        :    TATT-GACTGGGGTT----GAG-GG-CAACA-T-TGATC-ATGTT-AG-TCC--CAAGGGAC-GAA-A-TATTGCCCGACGC
gi|34633                      :    TATC-GACTGGGGTT----GAG-GG-CAACA-T-TGATT-ATGTT-AG-TCC--CAAGGGAC-GGA-A-TATTGCCCGACGC
gi|34636                      :    TACT-GACTGGGATT----GAG-GG-CAACA-T-TGATT-ATGTT-AG-TCC--CAAGGGAC-GGA-A-TATTGCCCGACGC
gi|34638                      :    TATT-GACTGGGTTT----GAG-GG-CAACA-T-TGATA-ATGTT-AG-TCT--CAAGGGAC-GGA-A-TATTGCCCGACGC
gi|34632                      :    TATT-GACTGGGGTT----GAG-GG-CAACA-T-TGATT-ATGTT-AG-TCC--CTAGGGAC-GAA-A-TATTGCC
gi|34634                      :    TATT-GACTGGGGTT----GAG-GG-CAACA-T-TGATT-ATGTT-AG-TCC--CAAGGGAC-GGA-A-TATTGC
gi|34642                      :    TATTAGACTGAG-TT----GAG-GG-CAACA-T-TGATTGATGTT-AG-TCC--CAAGGGAC-GAA-A-TATTGCCCGACGCgtcgggc
gi|34627                      :    TATT-GACTGGGGTT----GAG-GG-CAACA-T-TGATT-GTGTT-AG-TCC--CTCAGGAC-GAA-AGTATTGCCCGACGC
gi|34643                      :   tTATT-GACTGGAATT----GAG-GG-TAACA-T-TGATT-ATGTT-AG-TCC--CAAGGGAC-GGA-A-TATTTCCCAATGC
gi|34639                      :    TATT-GACTGGGTTT----GAG-G--CAACA-T-TGATT-ATGTT-AG-TCC--CAAGG--C-GGA-A-TATTGCCCGA
gi|34637                      :    TGTT-GACTGGGATT----GAG-GG-CAACA-T-GGATT-ATGTT-AG-TCA--CAAGGGAC-GGA-A-TATTGCC
gi|34635                      :    TATT-TACTGGGGTT----GAG-GG-CATCA-T-GGATT-GTGTTGGG-CCC--CAAGGGAC-AAA-A-TATTGCCCGA
gi|34640                      :    TATT-GACTGAGGTT----GAG-GGGCAACA-T-TGATT-ATGTT-AG-TCC--C-AGGGAC-GGA-A-
gi|34621                      :    TATT-GACTGGGGTC----GAG-GG-CAACA-T-GAATT-TTGTT-GGATCT--CA--GGACTGAA-A-TGTTGCCTGACGCatg
gi|34618                      : attTATT-GACTGGGGTC----GAG-GG-CAACT-T-GGGTT-TTGTT-GG-ACC--CGAGGACT-GAA-A-TGTTGCCTGAGGC
gi|34620                      : attTATT-GACTGGGGTC----GAGAGA-AAACA-T-AGGTT-TTGTT-GG-ACC--CGAGGACC-GAA-A-TGTTGCCTGAGGC
gi|34623                      : attTATT-GACTGGGGTT----GAG-AA-C--CA---GGGTT-TTGTT-GG-ACC--CGAGGACT-GAA-A-TGTTGCCTGA
gi|34619                      : attTATT-GACTGGGTTC----GTG-GG-CAACA-T-GGGTG-TTGTT-GG-ACC--CTCGAACC-AAA-A-TGTTGCCgg
gi|34622                      : atgTATT-GACTGGGGTC----GAG-GT-CAACA-TGGGATT--TGTT-GG-ACC--Ct
gi|34628                      : attTATT-GACC--GGTTTCGAGAG-GA-CAACA----G--C--TGTT-TG-ACC--CGA-GGACGGAA-A-TGTTGCCTGAtcgaaccgaaaagctgcttgcggc
gi|34641                      :   tTATT-GAATGGGTTC----AAG-GA-CAACAGC-TGTTT--TGTT-TG-ACC--T----GACTGAA-C-TGTTGCCCGAAGC
gi|34626                      :    TATT-GACTGAGGTT----CAG-GG-CAATG-T---GTT-TTGTT-GG-T-C--TGAGGCA--GAA-A-T-TTG
gi|34629                      : attTATT-GACTGGGTTC----AAA-GA-CAACA-T---GTT-TTGTT-TG-ACCT-TGAAGGAC-GGATC-TGTTGTCTGAAGCgtctaagg
gi|34624                      :    tACT-GACTAAGGTC----GAG-GA-CAACA-------C-GTGTT-TT-GCC--TGAGGATC-AAA-A-TATTACCTGA
gi|34644                      :  attcTT-GACTTGGGTC----GAG-GG-CAGCA-A-GGGTT-TTGTT-AG-ACCCTCAA--ACC-AAA-A-TGTTGCCC
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|34625 ): ATTTACTGAACGTGGTTGTGGGCAACGTGGGATTTTGGATCCGGAAACTATAATTTTGCCTGAGGC
Unaligned ( gi|34630 ): TTATTGACTGGTTTCGAGGACATCTGTTTTGTTTAAACCGAGGACGGATATGTTGC






Alignments
lowQualScore                  :         1       0       33   1  1 77 1  22    33 1  1 3   11 3 1  3 1             
lowQualScore                  :         .       .       ..   .  . .. .  ..    .. .  . .   .. . .  . .             
lowQualScore                  :         5       5       77   5  5 22 8  55    44 5  5 8   00 1 5  1 5             
consensus                     :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
Reference ( family-672 )      :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
gi|34618                      :     TATT-GACTGGGGTCGAGGG--CAA-CT-T-GGGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAGGC
gi|34619                      :  attTATT-GACTGGGTTCGTGGG--CAA-CA-T-GGGTGT-TGTT-GGACC-CTCGAACC-A-AA-A-TGTTGCC
gi|34620                      :  atgTATT-GACTGGGGTCGAGAG--AAAACA-T-AGGTTT-TGTT-GGACC-CGAGGACC-G-AA-A-TGTTGCCTGAGGCt
gi|34621                      :  attTATT-GACTGGGGTCGAGGG--CAA-CA-T-GAATTT-TGTT-GGATC-TCAGGACT-G-AA-A-TGTTGCCTGACGC
gi|34622                      :  attTATT-GACTGGGGTCGAGGT--CAA-CA-T-GGGATT-TGTT-GGACC-CTCGAACC-G-AA-A-AGCTGC
gi|34623                      :  attTATT-GACTGGGGTTGAGAA--C---CA-G--GGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAttgcggc
gi|34624                      :   attACT-GACTAAGGTCGAGGA--CAA-CA-CGTG-TTT-TG------CC-TGAGGATC-A-AA-A-TATTACCTGAgg
gi|34626                      : attcTATT-GACTGAGGTTCAGGG--CAA-TG-T---GTTT-TGTT--GGTC-TGAGGCA--G-AA-A-T-TTG
gi|34627                      :  attTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTG-TGTT-AGTCC-CTCAGGAC-G-AA-AGTATTGCCCGACGCgtctaagg
gi|34628                      :    tTATT-GACCGGTTTCGAGAGGACAA-CA----G---C-TGTT-TGACC-CGAGG-AC-GGAA-A-TGTTGCCTGA
gi|34629                      :    tTATT-GACTGGGTTCAAAGA--CAA-CA-T---GTTT-TGTT-TGACCTTGAAGGAC-G-GATC-TGTTGTCTGAAGC
gi|34630                      :    tTATT-GACTGGTTTCGAGG-----A-CA-T-CTGTTT-TGTT-TAAAC-CGA-GGAC-G-GATA-TGTTGC
gi|34631                      :    tTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATCA-TGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34632                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CTAGGGAC-G-AA-A-TATTGCC
gi|34633                      :     TATC-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34634                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGC
gi|34635                      :     TATT-TACTGGGGTTGAGGG--CAT-CA-T-GGATTG-TGTTGGGCCC-CAAGGGAC-A-AA-A-TATTGCCCGAgtcgggc
gi|34636                      :     TACT-GACTGGGATTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34637                      :     TGTT-GACTGGGATTGAGGG--CAA-CA-T-GGATTA-TGTT-AGTCA-CAAGGGAC-G-GA-A-TATTGCC
gi|34638                      :     TATT-GACTGGGTTTGAGGG--CAA-CA-T-TGATAA-TGTT-AGTCT-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34639                      :     TATT-GACTGGGTTTGAGG---CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGG--C-G-GA-A-TATTGCCCGA
gi|34640                      :     TATT-GACTGAGGTTGAGGGG-CAA-CA-T-TGATTA-TGTT-AGTCC-C-AGGGACGG-AA-A-TG
gi|34641                      :     TATT-GAATGGGTTCAAGGA--CAA-CAGC-TG-TTT-TGTT-TGACC-TGA----CTG-AA-C-TGTTGCCCGAAGC
gi|34642                      :     TATTAGACTGAG-TTGAGGG--CAA-CA-T-TGATTGATGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34643                      :     TATT-GACTGGAATTGAGGG--TAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTTCCCAATGC
gi|34644                      :       TT-GACTTGGGTCGAGGG--CAG-CA-A-GGGTTT-TGTT-AGACC-CTCAAACC-A-AA-A-TGTTGCCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34625 ): ATTTACTGAACGTGGTTGTGGGCAACGTGGGATTTTGGATCCGGAAACTATAATTTTGCCTGAGGC






Alignments
lowQualScore                  :         1       0       33   1  1 77 1  22    33 1  1 3   11 3 1  3 1             
lowQualScore                  :         .       .       ..   .  . .. .  ..    .. .  . .   .. . .  . .             
lowQualScore                  :         5       5       77   5  5 22 8  55    44 5  5 8   00 1 5  1 5             
consensus                     :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
Reference ( family-672 )      :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
gi|34618                      :     TATT-GACTGGGGTCGAGGG--CAA-CT-T-GGGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAGGC
gi|34619                      :  attTATT-GACTGGGTTCGTGGG--CAA-CA-T-GGGTGT-TGTT-GGACC-CTCGAACC-A-AA-A-TGTTGCC
gi|34620                      :  atgTATT-GACTGGGGTCGAGAG--AAAACA-T-AGGTTT-TGTT-GGACC-CGAGGACC-G-AA-A-TGTTGCCTGAGGCt
gi|34621                      :  attTATT-GACTGGGGTCGAGGG--CAA-CA-T-GAATTT-TGTT-GGATC-TCAGGACT-G-AA-A-TGTTGCCTGACGC
gi|34622                      :  attTATT-GACTGGGGTCGAGGT--CAA-CA-T-GGGATT-TGTT-GGACC-CTCGAACC-G-AA-A-AGCTGC
gi|34623                      :  attTATT-GACTGGGGTTGAGAA--C---CA-G--GGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAttgcggc
gi|34624                      :   attACT-GACTAAGGTCGAGGA--CAA-CA-CGTG-TTT-TG------CC-TGAGGATC-A-AA-A-TATTACCTGAgg
gi|34626                      : attcTATT-GACTGAGGTTCAGGG--CAA-TG-T---GTTT-TGTT--GGTC-TGAGGCA--G-AA-A-T-TTG
gi|34627                      :  attTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTG-TGTT-AGTCC-CTCAGGAC-G-AA-AGTATTGCCCGACGCgtctaagg
gi|34628                      :    tTATT-GACCGGTTTCGAGAGGACAA-CA----G---C-TGTT-TGACC-CGAGG-AC-GGAA-A-TGTTGCCTGA
gi|34629                      :    tTATT-GACTGGGTTCAAAGA--CAA-CA-T---GTTT-TGTT-TGACCTTGAAGGAC-G-GATC-TGTTGTCTGAAGC
gi|34630                      :    tTATT-GACTGGTTTCGAGG-----A-CA-T-CTGTTT-TGTT-TAAAC-CGA-GGAC-G-GATA-TGTTGC
gi|34631                      :    tTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATCA-TGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34632                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CTAGGGAC-G-AA-A-TATTGCC
gi|34633                      :     TATC-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34634                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGC
gi|34635                      :     TATT-TACTGGGGTTGAGGG--CAT-CA-T-GGATTG-TGTTGGGCCC-CAAGGGAC-A-AA-A-TATTGCCCGAgtcgggc
gi|34636                      :     TACT-GACTGGGATTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34637                      :     TGTT-GACTGGGATTGAGGG--CAA-CA-T-GGATTA-TGTT-AGTCA-CAAGGGAC-G-GA-A-TATTGCC
gi|34638                      :     TATT-GACTGGGTTTGAGGG--CAA-CA-T-TGATAA-TGTT-AGTCT-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34639                      :     TATT-GACTGGGTTTGAGG---CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGG--C-G-GA-A-TATTGCCCGA
gi|34640                      :     TATT-GACTGAGGTTGAGGGG-CAA-CA-T-TGATTA-TGTT-AGTCC-C-AGGGACGG-AA-A-TG
gi|34641                      :     TATT-GAATGGGTTCAAGGA--CAA-CAGC-TG-TTT-TGTT-TGACC-TGA----CTG-AA-C-TGTTGCCCGAAGC
gi|34642                      :     TATTAGACTGAG-TTGAGGG--CAA-CA-T-TGATTGATGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34643                      :     TATT-GACTGGAATTGAGGG--TAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTTCCCAATGC
gi|34644                      :       TT-GACTTGGGTCGAGGG--CAG-CA-A-GGGTTT-TGTT-AGACC-CTCAAACC-A-AA-A-TGTTGCCC


blockSeqs                     :         A               GA   A  G GT G  GA    GG A  T T   AC G G  T G
blockSeqs                     :         .               G    .  . G  G  T     G  A  . G   AC T .  T .
blockSeqs                     :         .               .    .  . A  A  T     G  A  . C   AC . .  . .
blockSeqs                     :         .               .    .  . G  G  T     G  A  . T   AC . .  . .
blockSeqs                     :         .               .    .  . G  G  T     G  A  . G   AC . .  . .
blockSeqs                     :         .               .    .  . T  G  T     G  G  . G   AT . .  . .
blockSeqs                     :         .               .    .  . C  A  T     A  T  . G   CA . .  . .
blockSeqs                     :         .               .    .  . T  G  T     T  A  . T   GA . .  . .
blockSeqs                     :         .               .    .  . T  G  G     T  A  . G   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  C     T  A  . G   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  T     A  T  . G   GA . .  . .
blockSeqs                     :         .               .    .  . G  A  T     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     A  T  . T   GA . .  . .
blockSeqs                     :         .               .    .  . G  A  A     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     A  C  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  G     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     A  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . T  A  A     T  T  . A   GA . .  . .
blockSeqs                     :         .               .    .  . G  A  A     A  A  . G   GA . .  . .
blockSeqs                     :         .               .    .  . .  G  A     A  T  . A   AC . .  . .
blockSeqs                     :         .               .    .  . .  .  T     A  T  . A   A  . .  . .
blockSeqs                     :         .               .    .  . .  .  A     .  A  . T   .  . .  . .
blockSeqs                     :         .               .    .  . .  .  T     .  .  . .   .  . .  . .


blockSeqCons                  :     
originalCons                  :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
finalCons                     :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34625 ): ATTTACTGAACGTGGTTGTGGGCAACGTGGGATTTTGGATCCGGAAACTATAATTTTGCCTGAGGC






Alignments
lowQualScore                  :         1       0       33   1  1 77 1  22    33 1  1 3   11 3 1  3 1             
lowQualScore                  :         .       .       ..   .  . .. .  ..    .. .  . .   .. . .  . .             
lowQualScore                  :         5       5       77   5  5 22 8  55    44 5  5 8   00 1 5  1 5             
consensus                     :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
Reference ( family-672 )      :     TATT-GACTGGGGTCGAGGG--CAA-CA-T-TGATTN-TGTT-AGNCC-CGAGGGAC-G-AA-A-TGTTGCCCGACGC
gi|34618                      :     TATT-GACTGGGGTCGAGGG--CAA-CT-T-GGGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAGGC
gi|34619                      :  attTATT-GACTGGGTTCGTGGG--CAA-CA-T-GGGTGT-TGTT-GGACC-CTCGAACC-A-AA-A-TGTTGCC
gi|34620                      :  atgTATT-GACTGGGGTCGAGAG--AAAACA-T-AGGTTT-TGTT-GGACC-CGAGGACC-G-AA-A-TGTTGCCTGAGGCt
gi|34621                      :  attTATT-GACTGGGGTCGAGGG--CAA-CA-T-GAATTT-TGTT-GGATC-TCAGGACT-G-AA-A-TGTTGCCTGACGC
gi|34622                      :  attTATT-GACTGGGGTCGAGGT--CAA-CA-T-GGGATT-TGTT-GGACC-CTCGAACC-G-AA-A-AGCTGC
gi|34623                      :  attTATT-GACTGGGGTTGAGAA--C---CA-G--GGTTT-TGTT-GGACC-CGAGGACT-G-AA-A-TGTTGCCTGAttgcggc
gi|34624                      :   attACT-GACTAAGGTCGAGGA--CAA-CA-CGTG-TTT-TG------CC-TGAGGATC-A-AA-A-TATTACCTGAgg
gi|34626                      : attcTATT-GACTGAGGTTCAGGG--CAA-TG-T---GTTT-TGTT--GGTC-TGAGGCA--G-AA-A-T-TTG
gi|34627                      :  attTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTG-TGTT-AGTCC-CTCAGGAC-G-AA-AGTATTGCCCGACGCgtctaagg
gi|34628                      :    tTATT-GACCGGTTTCGAGAGGACAA-CA----G---C-TGTT-TGACC-CGAGG-AC-GGAA-A-TGTTGCCTGA
gi|34629                      :    tTATT-GACTGGGTTCAAAGA--CAA-CA-T---GTTT-TGTT-TGACCTTGAAGGAC-G-GATC-TGTTGTCTGAAGC
gi|34630                      :    tTATT-GACTGGTTTCGAGG-----A-CA-T-CTGTTT-TGTT-TAAAC-CGA-GGAC-G-GATA-TGTTGC
gi|34631                      :    tTATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATCA-TGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34632                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CTAGGGAC-G-AA-A-TATTGCC
gi|34633                      :     TATC-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34634                      :     TATT-GACTGGGGTTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGC
gi|34635                      :     TATT-TACTGGGGTTGAGGG--CAT-CA-T-GGATTG-TGTTGGGCCC-CAAGGGAC-A-AA-A-TATTGCCCGAgtcgggc
gi|34636                      :     TACT-GACTGGGATTGAGGG--CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34637                      :     TGTT-GACTGGGATTGAGGG--CAA-CA-T-GGATTA-TGTT-AGTCA-CAAGGGAC-G-GA-A-TATTGCC
gi|34638                      :     TATT-GACTGGGTTTGAGGG--CAA-CA-T-TGATAA-TGTT-AGTCT-CAAGGGAC-G-GA-A-TATTGCCCGACGC
gi|34639                      :     TATT-GACTGGGTTTGAGG---CAA-CA-T-TGATTA-TGTT-AGTCC-CAAGG--C-G-GA-A-TATTGCCCGA
gi|34640                      :     TATT-GACTGAGGTTGAGGGG-CAA-CA-T-TGATTA-TGTT-AGTCC-C-AGGGACGG-AA-A-TG
gi|34641                      :     TATT-GAATGGGTTCAAGGA--CAA-CAGC-TG-TTT-TGTT-TGACC-TGA----CTG-AA-C-TGTTGCCCGAAGC
gi|34642                      :     TATTAGACTGAG-TTGAGGG--CAA-CA-T-TGATTGATGTT-AGTCC-CAAGGGAC-G-AA-A-TATTGCCCGACGC
gi|34643                      :     TATT-GACTGGAATTGAGGG--TAA-CA-T-TGATTA-TGTT-AGTCC-CAAGGGAC-G-GA-A-TATTTCCCAATGC
gi|34644                      :       TT-GACTTGGGTCGAGGG--CAG-CA-A-GGGTTT-TGTT-AGACC-CTCAAACC-A-AA-A-TGTTGCCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|34625 ): ATTTACTGAACGTGGTTGTGGGCAACGTGGGATTTTGGATCCGGAAACTATAATTTTGCCTGAGGC