lowQualScore : 4444444444444444444444444444444444444444444444444 11111111111111111111 3333333333333333333333
lowQualScore : 1 1 0 00 2 00 222 111 111 66 0 11 0 0 5555555555555555555555555555555555555555555555555 00 222222 0 0 0 88888 000 555555555 77777777777777777777 0 2 0 1 0 11 0 0 0 00 6666666666666666666666 77 2
lowQualScore : . . . .. . .. ... ... ... .. . .. . . ................................................. .. ...... . . . ..... ... ......... .................... . . . . . .. . . . .. ...................... .. .
lowQualScore : 2 2 6 88 4 77 777 333 777 99 4 22 4 5 0000000000000000000000000000000000000000000000000 99 555555 4 4 4 88888 777 333333333 88888888888888888888 4 5 4 6 4 44 4 4 4 77 5555555555555555555555 77 9
consensus : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-TTT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--T--G------A--T------TTCAC-GAA-A-TC--N--CT---A-----A---AAAC-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-ACTG---GA--AAAGTGA-C----NCAGTGATTTCACGAAA
Reference ( gi|132202 ) : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--C--T------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--C-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAAGTGC-C----CCAGTAATTTCACAAAA
gi|132206 : ATTTC-ATGA-AA-TCAC--TAA-A--AA-CTCT--C-G--GGA-TTT-CGTG--AAAT-CACT---G-----
gi|132206 : attttgtgaaattactggggcacttttcATTTC-ACGA-AA-TCCC--GAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-AGCTAA-G-----T--GAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAagctaagtgaaacagtgatttcacgaattccctgaaagt
gi|132203 : attttgtgaaattactggggcacttttccagtgATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--C--T------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--C-----G-G-GA-T-T-TCGTG--A-AA-T-gt
gi|132203 : ATTTC-ACGA-AA-TCCC--GAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-AGCTAA-G-----T--GAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---Gccctag
gi|132191 : ATTTC-GCGA-AA-TCTC--TAA-A--A--CTTT--CAA--GAA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--T--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA
gi|132191 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-TACTAA-G-----T--GAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TT--C--TT---G-----A---AAGT-----T--TT--A-----G-A-GA-T-T-TCGCG--A-AA-T-tgacacctccattttacacaa
gi|132194 : ATTTC-GTGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CATT---G-----T--TTC-ACTTA-------T----A--G--T--G------A--T------TTCAT-GAA-A-CC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAcactggaaatgacacctccattttacacaa
gi|132194 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGG-TTT-CATG--AAAT-CACT---A-----TAAGTG-AAA---------C----A--A--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCACG--A-AA-T-tgacaccttcatcttacacaa
gi|132197 : ATTTC-GCAA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CA-----G-----T--TTC-ATT---------T----A--G--T--G------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---GAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA--TGA-C----ACCTTCATTTTACAcactggaaatgacaccttcatcttacacaa
gi|132197 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTCT--TAG--TGA-TTT-CATG--AAAT-CACT---A-----A--ATG-A----------------A--A--C--TG-----A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TTGCG--A-AA-T-ca
gi|132192 : ATTTC-GCGA-AA-TCTC--TAA-A--A--CTTT--CAA--GAA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--T--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-cactggaaatgacaccttcattttacaca
gi|132192 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-TACTAA-G-----T--GAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TT--C--TT---G-----A---AAGT-----T--TT--A-----G-A-GA-T-T-TCGCG--A-AA-T-T-CCTA---Gtcctag
gi|132195 : ATTTC-GTGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CATT---G-----T--TTC-ACTTA-------T----A--G--T--G------A--T------TTCAT-GAA-A-CC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-
gi|132195 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGG-TTT-CATG--AAAT-CACT---A-----TAAGTG-AAA---------C----A--A--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCACG--A-AA-T-C-TCTA---Gctctag
gi|132198 : ATTTC-GCAA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CA-----G-----T--TTC-ATT---------T----A--G--T--G------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---GAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-
gi|132198 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTCT--TAG--TGA-TTT-CATG--AAAT-CACT---A-----A--ATG-A----------------A--A--C--TG-----A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TTGCG--A-AA-T-T-Ata
gi|132201 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--TAG--GGA-ATT-CGTG--AAAT-CACT---G-----T--TTT-ACT---------------------------------T------TTCAT-GAA-A-TA--T--CT---A-----T---AAAC-----T--CT--A-----G-A-AA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA--TGA-C----ACCTTCATTTTACACAA
gi|132201 : ATTTC-ACGA-AA-TTTC--TAG-A--G--TTTA--TAG--ATA-TTT-CATG--AAA---A-----G-----T--AAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TC--C--CT---A-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-
gi|132220 : ATTTC-ATGA-AA-TCAC--TAA-A--A--ACTC--TAG--GGA-TTT-CGTG--AAAT-CACT---G-----cactggaaatgacaccttcattttacacaa
gi|132220 : atttcATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-TACTAA-G-----T--GAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-tactaagtgaaacagtgatttcacgaatttcttgaaa
gi|132213 : atttccagtgATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GAA-ATT-CATG--AAAT-CCCT---G-----T--TTC-ACA---------T----A--G--G--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAT-----T--CT--A-----G-G-GA-T-T-TGGTG--A-AA-tttcttgaaa
gi|132208 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GAA-ATT-CATG--AAAT-CCCT---G-----T--TTC-ACA---------T----A--G--G--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAT-----T--CT--A-----G-G-GA-T-T-TGGTG--A-AA-ccctag
gi|132221 : ATTTC-ATGA-AA-CCAC--TAA-A--A--ACTC--TAG--GGA-TTT-CGTG--AAAT-CACT---G-----
gi|132221 : atttcATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGG-TTT-CATG--AAAT-CACT---A-----TAAGTG-AAA---------C----A--A--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAcactataagtgaaacaatgatttcacgaattccctgaaagt
gi|132205 : atttccagtgATTTC-ATGA-AA-TCAC--TAA-A--AA-CTCT--C-G--GGA-TTT-CGTG--AAAT-CACT---GGAAAAG--TGC--CC---------C----A--G--T--A------A--T------TTCAC-AAA-A-TC-----CT--------------GAC-----T------------G-G-GA-T-T-Tgt
gi|132205 : ATTTC-ACGA-AA-TCCC--GAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-
gi|132205 : ATTTT-GTGA-AA-TTAC--TGG-GGCA--CTTTTCCAG--TGA-TTT-CACG--AAAT-CCCGAGAG-----T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-Tcactggaaaagtgccccagtaatttcacaaaatcctgactgggattt
gi|132204 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--TAG--GGA-ATT-CGTG--AAAT-CACT---G-----T--TTT-ACT---------------------------------T------TTCAT-GAA-A-TA--T--CT---A-----T---AAAC-----T--CT--A-----G-A-AA-T-T-TCGTG--A-AA-T-cctgactgggattt
gi|132204 : ATTTC-ACGA-AA-TTTC--TAG-A--G--TTTA--TAG--ATA-TTT-CATG--AAA---A-----G-----T--AAA-AC---------------A--G--T--G------A--T------TTCAC-GAA-T-TC--C--CT---A-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---Gccctag
gi|132209 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GAA-ATT-CATG--AAAT-CCCT---G-----T--TTC-ACA---------T----A--G--G--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAA
gi|132211 : ATTTC-GCGA-AA-TCCC--TGA-A--A--CTTT--CAGAAGGA-ATT-CGTG--AAAT-CAC-------------TTC-G-----------T----A--A--C--T------A--TAGTGCATTCAT-G-A-A-TC--A--C----A-----A---AGAC-----T--CC--T-----A-G-GA-T-T-TCGTGA-A-AA-T-CAACTG---GA--AAt
gi|132226 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGG-TTT-CATG--AAAT-CACT---A-----T--tgaaacactctcattgttacaacaa
gi|132226 : gtgtcatttccagtgATTTC-ATGA-AA-CCAC--TAA-A--A--ACTC--TAG--GGA-TTT-CGTG--AAAT-CACT---G-----aagtgaaacaatgatttcac
gi|132210 : gtgtcatttcATTTC-GCGA-AA-TC----TAA-A--A--CTTT--CAG--GGATAAT-CGTG--AAAT-CA-----------T--TTC-ACT---------T----A--G--T--G------A--T------TTCAT-GAA-A-TC--A-------A-----ATC-AA--------------C-----G-G-GA-T-T-TCGTG----AA-T-C-ACTGC--GA--AAcactataagtgaaacaatgatttcac
gi|132199 : ATTTC-ACGA-AA-TC-----------A---TTT--CAT--TG---TG-TGTA--AAAT-GAAG---G-----T--GTC-ATT---------TCC--A--G--T--G------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AG-T-----T--CT--T-----A-GTGA-T-T-TCATG--A-AA-T-C-ACTA---AATGAAACTG-------------ATTTCACtgacttcttttacacaa
gi|132199 : ATTTC-ATGA-AA-TCAC--TAAGA--A--CTCT---AG--GGA-TTT-CGTG--AAAT-CACT---GGAAA-T--GAC-ACC---------T----------T--C------A--T------TTTAC-ACA----C--A--AT---G-----A---AA-------T----------------GA-T-T-TCGTG--A-AA-T-
gi|132214 : ATTTC-GCGA-AA-TCCC--TGA-A--A--CTTT--CAGAAGGA-ATT-CGTG--AAAT-CAC-------------TTC-G-----------T----A--A--C--T------A--TAGTGCATTCAT-G-A-A-TC--A--C----A-----A---AGAC-----T--CC--T-----A-G-GA-T-T-TCGTG--A-AA-cactaaatgaaactgatttcac
gi|132225 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CACT---G-----gcac
gi|132225 : actgtgtaactagggATTTC-GCGA-AA-TCCC--TA
gi|132193 : actgtgtaacATTTC-ATGA-AA-TCAC--TAA-A--A--ACTC--TAG--GGA-TTT-CGTG--AAAT-CACT---GGAAA-T--GAC-ACC---------T----------C--C------A--T------TTTAC-ACA-A-TCTTG--CT---A-----G---TTAT-----T--TT--TCA---G-G-AA-T-T-TTGTG--T-AA-T-C-ccctaaaactttcagggaattcgtgaaatcactg
gi|132193 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGA-TTT-CATG--AAAT-
gi|132212 : ATTTC-ATGA-AA-TCCC--TAA-A--A--CTTT--AAG--GGA-ATT-C-----AA---CACA---G-----T--TTT-ACT---------TA---A--G--A--C------A--T------TTCAT-AAA-A-TC--C--CT---A-----A---AAAC-----T--Ccactggaaatgacacctccattttacacaatcttgctagttatttttcaggaattttgtgtaatc
gi|132200 : ATTTC-ATGA-AA-TCAC--TAAGA--A--CTCT---AG--GGA-TTT-CGTG--AAAT-CACT---GGAAA-T--GAC-ACC---------T----------T--C------A--T------TTTAC-ACA----C--A--AT---G-----A---AA-------T----------------GA-T-T-TCGTG--A-AA-T----CTG---GA--AAaatgaatttaaattgtaaaat
gi|132200 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTCT--TAG--TGA-TTT-CATG--AAAT-
gi|132224 : ATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--TAG--GGA-ATT-CGTG--AAAT-CACT---G-----cactggaaatgacaccttcattttacacacaatgaaatgatttcgtgaaatctggaaa
gi|132224 : actgtgtaactagggATTTC-ACGA-AT-TCCC--TAA-A--A--GTTT--TAG--GGA-TTT-CGCG--AAAT-CCCTA--G-----T--TAC-AC
gi|132223 : actATTTC-GTGA-AA-TCCC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CATT---G-----cactg
gi|132196 : actgtgtaactagagATTTC-ATGA-AA-CCAC--TAA-A--A--ACTC--TAG--GGA-TTT-CGTG--AAAT-CACT---G-----
gi|132196 : ATTTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAG--TGG-TTT-CATG--AAAT-
gi|132222 : ATTTC-GCGA-AA-TCTC--TAA-A--A--CTTT--CAA--GAA-ATT-CGTG--AAAT-CACT---G-----cactg
gi|132207 : actgtgtaactaggaATTTC-GCGA-AA-TCCC--TAA-A--A--CTTT--TAG--GGA-ATT-CGTG--AAAT-
gi|132207 : ATTTC-ACGA-AT-TCCC--TAA-A--A--GTTT--TAG--GGA-TTT-CGCG--AAAT-CCCTA--G-----T--TAC-ACccctagttacac
gi|132213 : TTTC-ACCA-AA-TCCC--TAG-A--A--TTTT--TAG--TGA-TTT-CATG--AAAT-TCCT---A-----T--GTG-AAA---------C----A--G--G--G------A--T------TTCAT-GAA-T-TT--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---G
gi|132208 : TTTC-ACCA-AA-TCCC--TAG-A--A--TTTT--TAG--TGA-TTT-CATG--AAAT-TCCT---A-----T--GTG-AAA---------C----A--G--G--G------A--T------TTCAT-GAA-T-TT--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-
gi|132211 : TTTC-ACGA-AA-TCC---TAG-G--AGTCTTT-------GTG-ATT-CATG--AATG-CACT---A-----TAGTT--ACG---------A----A--G--T--G------A--T------TTCAC-GAA-T-TC--CTTCT---G-----A---AAGT-----T--TC--A-----G-G-GA-T-T-TCGCG--A-AA-T-
gi|132214 : TTTC-ACGA-AA-TCC---TAG-G--AGTCTTT-------GTG-ATT-CATG--AATG-CACT---A-----TAGTT--ACG---------A----A--G--T--G------A--T------TTCAC-GAA-T-TC--CTTCT---G-----A---AAGT-----T--TC--A-----G-G-GA-T-T-TCGCG--A-AA-TGC-ACatcaactggaaatgaaacactctcattgttacaacaa
gi|132217 : TTTC-ACGA-AA-TACC--TCG-C--G--TTAT--TAG--TGA-ATTTCATG--AAATTCA-T---G-----T--ATT-GCTAAGTTGAAAC----A--G--T--T------A--T------T-CAC-GAA-T-TT--C--CT---G-----A---AATT-----T--GT--A-----G-G-GATT-T-TCGTG--A-
gi|132215 : TTTCAGCGAGAA-TCCC--TAACA--A--CTTT--CAG--GGA-ATT-CGTGGAAAAT-CACT---G-----T--TTC-ACG---------T----GT-G--T--TG-----A--T------TTCATGGAA-A-TC--A--CTGCAA-----G---AAAC--------CT--------A-G-TA-T-T-TCGTAATA-GA-T-C-ACctcactgaaaa
gi|132215 : TTTCAGCGAGAA-TCCC--TAACA--A--CTTT--CAG--GGA-ATT-CGTGGAAAA-------------------TC-ACT------------------------------G--T------TTCAC-G-------------T---G------------------T--GT--T-----G----A-T-T-TCATGG-A-AA-T-C-ACTGCAAGA--AA------C----CTAGT-ATTTCGTA
gi|132219 : TTC-ACGA-AA-TCCC--TAG-A--G--TTTT--TAT--TGA-TAT-CATG--TAAT-TGCT---A-----A--GTG-AGA---------T----A--G--T--G------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-A-AA-T-tagatcac
gi|132210 : TTC-ACGA-AA-TCCCGTTGA--------TTT--------GA-TTT-CATG--AAAT-CACT---A------------AGT---------G----A--A--A--TG-----A--T------TTCAC-GATTA-TC--C--CT---G-----A---AAGT-----T--TT----------A-GA-T-T-TCGCG--A-AA-T-ctcactggaaatgacacctttattttacgcaa
gi|132216 : TTC-GTGA-AA-TCCC--T-A-A--A--CTTT--C-G--GGA-ATT--GTG--AAAT-C-CT---G-----T--TTC-ACT---------T----A--------T------AG-TG-----TTCAT-G-A-A-CC--A--CT---------A---AAAC-----T--CT--------A-G-GA-T-T-T-GTG--A-AA-T-C-AC-G---GA--AAtcactgcgaaatgacttcttttacacaa
gi|132217 : TC-ACGA-AAATCCC--TAC-A--A--ATTT--CAG--GAA-ATT-CGTG---AAT-AACT---G-----T--TTCAACT---------T----A--G--CAATACATGAA--T------TTCAT-GAA-ATTC--A--CT---A-----A---TAAC-----G--CG--A-----G-G-TA-T-T-TCGTG--A-AACT-C-ACTG---AA--AAtgaccttctatctttacaca
gi|132218 : -GCGT-AA-TTCC--TGA-A--T--ATTT--CAG--TAA-ATA-CACG--TAAT-CCCC---A-----T--TTC-ATT---------C----G--G--G--G------G--T------TTCAC-GTA-A-TC--A--CT---G-----A---AATA-----T--AC--A-----G-A-GA-T-T-ATGTG--A-AA-T-C-CCTG---AA--AA
gi|132212 : A-AA-TTCA--TTG-A--G--TTTT--TAG--GGA-TTT-TATG--AAAT--------G-----T--CTT-AAG---------T----A--AAAC--T------G--T------GT--T-GAA-T-TC--C--CT---T-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCATG--A-AA-T-t
gi|132219 : A-TTTC--TAA-A--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CACT---A-----T--CTC-ACT---------T----A--G--C--A------A--T------TACAT-GAT-A-TC--A--AT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AC-T-C-ACTG---GA--AAaaattgtaaaat
gi|132225 : -A--A--CT-----AG--GGA-TTT-CGCG--AAAT-CCCT---AAAAC-T--TTC-A-------------------G--G--G------A--A------TTCGT-GAA-A-TC--A--CT---tgacacctttattttacgcaa
gi|132224 : actgtgt-A--A--CT-----AG--GGA-TTT-CGCG--AAAT-CCCT---AAAA--C--TT----T---------T----A--G--G--G------A--A------TTCGT-GAA-A-TC--A--CT---g
gi|132206 : actgtgt--A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--C--T------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--C-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAAGTGC-C----CCAGTAATTTCACAAAAg
gi|132191 : a--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-TT--A--CT---A-----AGTGAAAC------------A-----G-T-GA-T-T-TCACG----AA-T-T-TCTT---GA--AA---GT-T----TTAGAGATTTCGCGAAA
gi|132194 : a--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------G--T------TTCAT-GAA-A-TC--A--CT---ATAAGTG---AAAC-----A--AT------------GA-T-T-TCACG--A-AT-T-C-CCTG-------AAAGT---T----TTAGGGATTTCACGAAAgacacctccattttacacaa
gi|132197 : a--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--T----CT---------T----A--G--T--G------A--T------TTCAT-GAA-A-TC--A--CT---A-----AATGAAAC-----T----------------GA-T-T-TCACG--A-AT-T-C-CCTG-------AAAGT---T----TTAGGGATTTTGCGAAAgacaccttcatcttacacaa
gi|132220 : a--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-TT--A--CT---A-----AGTGAAACAGTGAT--TT--C-----ACG-AA-T-T-TCTTG--A-AA-gacaccttcattttacaca
gi|132221 : --A--CTTT--CAG--GGA-ATT-CGTG--AAAT-CATT---G-----T--TTC-ACT---------T----ATAG--T--G------A--T------TTCAT-GAA-A-CC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA
gi|132221 : a--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------G--T------TTCAT-GAA-A-TC--A--CT---ATAAGTG---AAAC-----A--AT------------GA-T-T-TCACG--A-AT-T-C-CCTG-------AAAGT
gi|132209 : --A--TTTT--TAG--TGA-TTT-CATG--AAAT-TCCT---A-----T--GTG-AAA---------C----A--G--G--G------A--T------TTCAT-GAA-T-TT--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-
gi|132226 : --A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------G--T------TTCAT-GAA-A-TC--A--CT---A-----T---AA
gi|132193 : gtgtc--A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-Tgtgaaacaatgatttcac
gi|132200 : --A--TTTC--CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--T----CT---------T----A--G--T--G------A--T------TTCAT-GAA-A-Tgacacctccattttacacaatcttgctagttatttttcaggaattttgtgtaatc
gi|132218 : --A--TTTT--CAG--GGA-TTT-CACA--TAAT-CTCT---G-----T--AT--ATT---------TC---A--G--T--G------A--T------TACGT-GAA-A-CC--C--CC---G-----AATGAAA----------T--G-----G-G-GA-T-T-ACGTG--T-AT-T-T-ACTG---AA--Agacaccttcattttacacacaatgaaatgatttcgtgaaatctggaaa
gi|132220 : gcgtaattcctgaataTTT--CAA--GAA-ATT-CGTG--AAAT-CACT---G-----T--TTC-ACT---------T----A--G--T--A------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA
gi|132205 : aT--CAG--G-A-TTT-TGTG--AAAT-TACT---G-----G--GGC-ACT---------TTTCCA--G--T--G------A--T------TTCAC-GAA-A-TC-----CC---G-----A---GAGT-----T--TT--T-----A-GTGA-T-T-TCATG--A-AA-T-
gi|132196 : --CAG--TGA-TTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------G--T------TTCAT-GAA-A-Tctgggattt
gi|132192 : AG--GAA-TTT-CGCG--AAAT-CTCT---AAAAC-T--TTC-A----------------A--G--A--A------A--T------T-CGT-GAA-A-TC--A--CT---G------------------T--TT--CACTTAG-T-AA-T-T-TCATG--A-AA-T-C-ACTA---AA--AA----C-T----CTAGGGATTTCGTGAAA
gi|132210 : a-ATT-CACG--AAAT-C-CC---G-----T--TG--ATT---------T----G---------------A--T------TTCAT-GAA-A-TC--A--CT---A-----AGTGAAAT----------------------GA-T-T-TCACG--ATTA-T-C-CCTG-------AAAGT---T----TTAG--ATTTCGCGAAAag
gi|132206 : aTT-TGTG--AAAT-TACT---G-----G--GGC-ACT---------TTTCCA--G--T--G------A--T------TTCAC-GAA-A-TC-----CC---G-----A---GAGT-----T--TT--T-----A-GTGA-T-T-TCATG--A-AA-T-A-GCT---------AAGTGA-A----ACAGTGATTTCACGAAcactgcgaaatgacttcttttacacaa
gi|132195 : atTT-CACG--AAAT-CCCTAGAG-----T--TT----T---------T----A--G--T--G------G--T------TTCAT-GAA-A-TC--A--CT---ATAAGTG---AAAC-----A--AT------------GA-T-T-TCACG--A-AT-T-C-CCTG-------AAAGT---T----TTAGGGATTTCACGAAAttccctgaaagt
gi|132198 : atTT-CGCA--AAAT-CCCT---AAAAC-T--TTC-A-------------------G--G--G------A--A------TTCGT-GAA-A-TC--AGTTT---C-----A------------T--TT--A-----G-T-GA-T-T-TCATG--A-AA-T-C-ACT---------AAGAAC-T----CTAGGGATTTCGTGAAAtctctag
gi|132213 : aTT-CACC--AAAT-CCCT---AGAA--T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-TT--C--CT---ATGT--G---AAAC------------A-----G-G-GA-T-T-TCATG--A-AT-T-T-CCTG-------AAAGT---T----TTAGGGATTTCGCGAAAatta
gi|132208 : tTT-CACC--AAAT-CCCT---AGAA--T--TT----T---------T----A--G--T--G------A--T------TTCAT-GAA-A-TT--C--CT---ATGT--G---AAAC------------A-----G-G-GA-T-T-TCATG--A-AT-T-T-CCTG-------AAAGT---T----TTAGGGATTTCGCGAAAtccctag
gi|132204 : aTT-CACG--AAAT-TTCTAGAG-----T--TT--A-----------T----A--G--A--T------A--T------TTCAT-GAA-A-----A--GT---A-----A---AA--------------C-----A-GTGA-T-T-TCACG--A-AT-T-C-CCT-----A--AAAGT---T----TTAGGGATTTCGCGAAAa
gi|132209 : atTT-CGCG--AAAT-CCCT---AAAAC-T--TTC-A-------------------G--G--A------A--A------TTCAT-GAA-A-TC--C--CT---G------------------T--TT--CACATAG-G-AA-T-T-TCATG--A-AA-T-C-ACTA---AA--AAtccctag
gi|132219 : at-CGTA--AAAT-AAAG---G-----T--GTC-ATT---------TCC--A--G--T--G------A--G------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----T-T-GA-T-A-TCATG--T-AA-T-T-GCT---------AAGTGA-G----ATAGTGATTTCACGAAt
gi|132201 : atttctaaaactttcagggaaGTA--AAAT-GAAG---G-----T--GTC-ATT---------TCC--A--G--T--G------A--T------TTCAC-GAA-A-TT--T--CT---A-----G---AGTT-----T--AT--A-----G-A-TA-T-T-TCATG--A-AA-----A--G---TA--AAA-----------CAGTGATTTCACGAAcaa
gi|132226 : atttcgcgaaatccctaaaacttttagggaaGTG--AAAT-CATT---G-----T--TTC-ACT---------T----ATAG--T--G------A--T------TTCAT-GAA-A-CC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAacaa
gi|132199 : gtgtcaGTG--AAAT-CA-----G-----T--TTC-ATT---------T----A--G--T--G------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---GAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA--TGA-C----ACCTTCATTTTACA
gi|132225 : atttcacgaaatcatttcattgtgACT---G-----T--GTA-ACT--------------A--G--G--G------A--T------TTCGC-GAA-A-TC--C--CT---A-----A---AA-C-----T--TT--CA----G-G-GA-A-T-TCGTG--A-AA-T-C-ACTG---
gi|132224 : ACT---G-----T--GTA-ACT--------------A--G--G--G------A--T------TTCGC-GAA-A-TC--C--CT---A-----A---AACT-----T--TT--A-----G-G-GA-A-T-TCGTG--A-AA-T-C-ACTG---
gi|132223 : ACT---G-----T--GTA-ACT--------------A--G--A--G------A--T------TTCGT-GAA-A-TC--C--CT---A-----A---AA-C-----T--TT--CA----G-G-GA-A-T-TCGTG--A-AA-T-C-ATTG---
gi|132222 : ACT---G-----T--GTA-ACT--------------A--G--G--A------A--T------TTCGC-GAA-A-TC--T--CT---A-----A---AA-C-----T--TT--C-----A-A-GA-AAT-TCGTG--A-AA-T-C-ACTG---
gi|132211 : T---G-----T--TTC-ATT---------TCC--A--G--T--T------GATT------TTCAC-GAA-A-TC-----CT---A-----G---GAGT-----C--TT--T-----G-T-GA-T-T--CATG--A-AT-G-C-ACT--------ATAGTTA-C----GAAGTGATTTCACGAA
gi|132226 : atttcgcgaaatccctgaaactttcagaaggaa---G-----T--GTC-ATT---------TCC--A--G--T--G------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----G-T-GG-T-T-TCATG--A-AA-T-C-ACT-----A--TAAGTGA-A----ACAATGATTTCACctctcattgttacaacaa
gi|132209 : T---------T----A--G--T--G------A--T------TTCAT-GAA-A-TT--C--CT---ATGT--G---AAAC------------A-----G-G-GA-T-T-TCATG--A-AT-T-T-CCTG-------AAAGT---T----TTAGGGATTTCGCGAAA
gi|132203 : a------A--T------TTCAC-GAA-A-TC-----CC---G-----A---GAGT-----T--TT--T-----A-GTGA-T-T-TCATG--A-AA-T-A-GCT---------AAGTGA-A----ACAGTGATTTCACGAAaaat
gi|132191 : ------A--T------TTCGC-GAA-A-TC--T--CT---A-----A---AA-C-----T--TT--C-----A-A-GA-AAT-TCGTG--A-AA-T-C-ACTG----------TTTCAC----TTAGTAATTTCATGAAAttccctgaaagttttagggatttcgcgaaatccctag
gi|132192 : ------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----G-T-GA-T-T-TCATG--A-AA-T-T-ACT---------AAGTGA-A----ACAGTGATTTCACGAAtcactaaaaactctagggatttcgtgaaatcactggaaatgacacctccattttacacaa
gi|132192 : ------A--T------TTCGC-GAA-A-TC--T--CT---A-----A---AA-C-----T--TT--C-----A-A-GA-AAT-TCGTG--A-AA-T-C-ACTG----------TTTCAC----TTAGTAATTTCATGAAAtttcttgaaagttttagagatttcgcgaaattcctag
gi|132195 : atttcacgaaatccctagagtttttagtga------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----G-T-GG-T-T-TCATG--A-AA-T-C-ACT-----A--TAAGTGA-A----ACAATGATTTCACGAAtcctag
gi|132198 : ------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AG-T-----T--CT--T-----A-GTGA-T-T-TCATG--A-AA-T-C-ACTA---AATGAAACTG-------------ATTTCACGAAttccctgaaagttttagggatttcacgaaatctctag
gi|132220 : ------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----G-T-GA-T-T-TCATG--A-AA-T-T-ACT---------AAGTGA-A----ACAGTGATTTCACGAAttccctgaaagttttagggattttgcgaaatta
gi|132221 : atttccagtg------A--T------TTCAC-GAA-A-TC--C--CT---A-----G---AGTT-----T--TT--A-----G-T-GG-T-T-TCATG--A-AA-T-C-ACT-----A--TAAGTGA-A----ACAATGATTTCACGAAtttcttgaaa
gi|132205 : atttccagtg------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--C-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAAGTGC-C----CCAGTAATTTCACAAAAttccctgaaagt
gi|132209 : ------A--T------TTCGC-GAA-A-TC--C--CT---A-----A---AA-C-----T--TT--C-----A-G-GA-AAT-TCATG--A-AA-T-C-CCTG---tcctgactgggattt
gi|132210 : ------A--T------TTCGC-GAA-A-TC------T---A-----A---AA-C-----T--TT--CA----G-G-GA-T-AATCGTG--A-AA-T-C-ATT------------TCA-C----TTAGTGATTTCATGAAAtttcacataggaatttcatgaaatcactaaaaat
gi|132225 : ------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---Gtcaaatcaacgggatttcgtgaatcactgcgaaatgacttcttttacacaa
gi|132193 : actgtgtaa------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AAcactg
gi|132193 : ------A--T------TACAC-AAA-A-TT--C--CT---G-----A---AAAA-----TAACTAGC-----A-A-GA-T-T-GTGTA--A-AA-T------G---GA--G--GTGT-CATTTCCAGTGATTTCACGAAAtgacacctccattttacacaatcttgctagttatttttcaggaattttgtgtaatc
gi|132212 : atttcatgaaatcactaaaaactctaggga------A--T------TTCAT-GAA-A-TC--C--CT---------A---AAAC-----T--TTA-A-----G-G-GA-A-T-TCc
gi|132200 : ------A--T------TTCAT-GAA-A-TC--A--CT---A-----A---GAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---GA--AA--TGA-C----ACCTTCATTTTACAaacacagttttacttaagacatttcataaaatccctaaaaactcaatgaatttaaattgtaaaat
gi|132224 : ------A--T------TTCAC-GAA-T-TC--C--CT---A-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---Gcacaatgaaatgatttcgtgaaatctggaaa
gi|132223 : actgtgtaa------A--T------TTCAC-GAA-T-TC--C--CT---G-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCACG--A-AA-T-C-TCTA---Gcactg
gi|132196 : actgtgtaa------A--T------TTCAT-GAA-A-CC--A--CT---A-----A---AAAC-----T--CT--A-----G-G-GA-T-T-TCGTG--A-AA-T-C-ACTG---cattg
gi|132222 : ------A--T------TTCAC-GAA-T-TT--C--TT---G-----A---AAGT-----T--TT--A-----G-A-GA-T-T-TCGCG--A-AA-T-T-CCTA---G
gi|132207 : actgtgtaa------A--T------TTCAC-GAA-T-TC--C--CT---A-----A---AAGT-----T--TT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCTA---Gcactg
gi|132207 : ------A--T------TTCGC-GAA-A-TC--C--CT---A-----A---AACT-----T--TT--A-----G-G-GA-A-T-TCGTG--A-AA-T-ttacac
gi|132213 : --CT--A-----G-G-GA-T-T-TCGCG--A-AA-T-C-CCT-----A--AAACT---T----TCAGGAAATTCATGAAAccctagttacac
gi|132205 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggaT--C-----A-G-GA-T-T-TTGTG--A-AA-T-T-ACTG---GG--GCACTTT-T----CCAGTGATTTCACGAAA
Alignments
lowQualScore : 1 22
lowQualScore : 1 1 1 2 33 2 1 33 1 5555 1 88 22 44 5555555 1 33 1 333 111 11 4 11 4 22 1 1 1 44 1 44 9 2
lowQualScore : . . . . .. . . .. . .... . .. .. .. ....... . .. . ... ... .. . .. . .. . . . .. . .. . .
lowQualScore : 2 2 2 7 33 3 2 11 2 0000 3 22 88 44 0000000 1 77 1 555 888 44 6 55 5 66 1 4 5 88 0 66 2 0
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAAAGTGACACAGTNATTTCACAAAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGATT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAC-GAAA-TC--NCT---AAA--AACTTT--AGGGATTTCGCG--AAA-TC-ACTG-GAAAAGTGACNCAGTGATTTCACGAAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACAC
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-Tctccattttacacaa
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACACtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGATT-TCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAGGAATTTTGTG--TAA-TC-ctccattttacacaatcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACAC
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-Tcttcatcttacacaa
gi|132196 : -ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-ctctag
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATTTTAC
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AGGGATTTCGTG--AAA-Taca
gi|132199 : ATTTC-ACGA-AA-TC---A-----TTTC------ATT-GTGTGTAAAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AGTGATTTCATG--AAA-TC-ACT-----AAATGAAAC--TGATTTCACta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATTTTAC
gi|132200 : atttcacgaaatcatttcattgtgt-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATTTTAC
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGATT-TCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T-------GATTTCGTG--AAA-T---CTG-GAAAacacaatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGAAT-TCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AGAAATTTCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATTTTAC
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CGGGATTTCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATTTCACAAAAacaa
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CGGGATTTCGTG--AAA-T
gi|132203 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagttttagggATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGAAT-TCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AGAAATTTCGTG--AAA-Tg
gi|132204 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaagttttaggg-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CGGGATTTCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATTTCACAAAAg
gi|132206 : ACTTTCAG--GGAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CGGGATTTCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATTTCACAAAAtcctgactgggattt
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGAAT-TCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGATT-TCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAAAT-TCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AGGGATTTGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAAAT-TCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------GGGATTTCGTG---AA-TC-ACTGCGAAA--TGACt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGAAT-TCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TAGGATTTCGTGA-AAA-TCAACTG-GAAA--TGAAACAttcttttacacaa
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGAAT-TC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--ATGAATTT------AAA-T----TG-TAAAActctcattgttacaacaa
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAAAT-TCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AGGGATTTGGTG--AAA-t
gi|132213 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagttttagggATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGAAT-TCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TAGGATTTCGTG--AAA-g
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGAAT-TCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AACCT----AGTATTTCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTCGG--GAATT---GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A-GGATTT-GTG--AAA-TC-AC-G-GAAA--TGAC
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAAAT-TCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AGGTATTTCGTG--AAACTC-ACTG-AAAActtctatctttacaca
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAAAT-ACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AGAGATTATGTG--AAA-TC-CCTG-AAAA
gi|132219 : A-TTTCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AGGGATTTCGTG--AAC-TC-ACTG-GAAA--TGACACCTTTATTTTACGCAAt
gi|132220 : TTTCAA--GAAAT-TCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA
gi|132221 : aACTTTCAG--GGAAT-TCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA
gi|132222 : a--A--G-------TG-ATTTCAC-GAAT-TT--CTT---GAA--AGTTTT--AGAGATTTCGCG--AAA-TT-CCT------AGTTACACAGT
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAAAT-TCGTG--AAATCACT-G----g
gi|132223 : actgtgtaactagga--A--A-------TG-ATTTCAC-GAAT-TC--CCT---GAA--AGTTTT--AGGGATTTCACG--AAA-TC-TCT------AGTTACACAGT
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCATT-G----g
gi|132224 : actgtgtaactagag--A--G-------TG-ATTTCAC-GAAT-TC--CCT---AAA--AGTTTT--AGGGATTTCGCG--AAA-TC-CCT------AGTTACACAGT
gi|132225 : --A--G-------TG-ATTTCAC-GAAT-TC--CCT---GAA--AGTTTT--AGGGATTTCGCG--AAA-TC-CCT------AGTTACACAGTg
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGAAT-TCGTG--AAATCACT-G----g
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AGGGATTTCGTG--AAA-TC-ACTG-GAAA--TGACAC
Alignments
lowQualScore : 22 11
lowQualScore : 1 1 1 2 33 1 11 1 4444 1 88888888 5555555555 1 1 11 111 11 11 111 2222 22 1 1 1 77 44 1 2 0 3
lowQualScore : . . . . .. . .. . .... . ........ .......... . . .. ... .. .. ... .... .. . . . .. .. . . . .
lowQualScore : 3 3 3 6 22 2 55 1 6666 2 55555555 4444444444 1 1 44 888 44 33 777 0000 33 0 2 3 44 33 0 7 7 0
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATT-TTACANAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTGACACAGTNATT-TCACAAAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTCCATT-TTACACAA
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTCCATT-TTACACAAtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAG---GAATT----TTGTG--TAA-TC-tcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATC-TTACACAA
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132195 : CT--AG---AGATT----TCGTG--AAA-TC-CCTA-AAActctag
gi|132196 : atttcacgaaatccctagagtttttagtggtttcatgaaatcactataagtgaaacaatgatttcacgaattccctgaaag-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATT-TTACA
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-Tca
gi|132199 : ATTTC-ACGA-AA-TC-------A-TTTCAT--TG---TGTGTA--AAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AG---TGATT----TCATG--AAA-TC-ACT-----AAATGAAAC--TGATT-TCACta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATT-TTACA
gi|132200 : atttcacgaaatcatttcattgtg-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATT-TTACA
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T----------GATT----TCGTG--AAA-T---CTG-GAAAcacaatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-TC-ACTG-GAAA--TGACACCTTCATT-TTACACAA
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATT-TCACAAAA
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-T
gi|132203 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-T
gi|132204 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaag-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATT-TCACAAAA
gi|132205 : A--AATCCC--AGTCAGGATT----TTGTG--AAA-TT-ACTG-GGGCACTTTTCCAGTGATT-TCACGAAAtcctgactgggattt
gi|132206 : atttcatgaaatcactaaaaactctcgggaACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTGCCCCAGTAATT-TCACAAAA
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGA-TTTCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------G---GGATT----TCGTG---AA-TC-ACTGCGAAA--TGAC----TTCTT-TTACACAAt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTGA-AAA-TCAACTG-GAAATGAAACACTCTCATTGTTACAA
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGA-ATTC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--AT---GAATTTAAATTGTA--AAA-Tcaa
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132213 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTG--AAA-
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGA-ATTCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AAC-CT--A----GTATT----TCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTC-G--GGA-ATT-GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A----GGATT----T-GTG--AAA-TC-AC-G-GAAA--TGAC
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAA-ATTCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AG---GTATT----TCGTG--AAACTC-ACTG-AAAActtctatctttacaca
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAA-ATACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AG---AGATT----ATGTG--AAA-TC-CCTG-AAAA
gi|132219 : A-TTTCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AG---GGATT----TCGTG--AAC-TC-ACTG-GAAA--TGACACCTTTATT-TTACt
gi|132220 : TTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAAgcaa
gi|132221 : aACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA
gi|132222 : aACT-G----TGTA-ACT-----A--G-------GA-ATTTCGC-GAAA-TC--TCT---AAA--ACTTTC--AA---GAAAT----TCGTG--AAA-TC-ACTG-
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----
gi|132223 : actgtgtaactaggaACT-G----TGTA-ACT-----A--G-------AG-ATTTCGT-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ATTG-
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----
gi|132224 : actgtgtaactagag--A--G-------TG-ATTTCAC-GAAT-TC--CCT---AAA--AGTTTT--AG---GGATT----TCGCG--AAA-TC-CCT------AGTTACACAGT
gi|132224 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----g
gi|132225 : actgtgtaactaggg--A--G-------TG-ATTTCAC-GAAT-TC--CCT---GAA--AGTTTT--AG---GGATT----TCGCG--AAA-TC-CCT------AGTTACACAGT
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----g
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TGACAC
Alignments
lowQualScore : 11111111
lowQualScore : 1 1 1 2 33 1 11 1 4444 1 00000000 6666666666 1 1 11 111 11 11 111 2222 22 1 1 1 77 33 999999 2 2 1
lowQualScore : . . . . .. . .. . .... . ........ .......... . . .. ... .. .. ... .... .. . . . .. .. ...... . . .
lowQualScore : 2 2 2 6 22 2 55 0 4444 1 00000000 8888888888 1 1 44 888 44 44 888 2222 44 0 3 4 55 22 777777 5 5 0
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACACAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACANAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC------AT-T-TTACACAA
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC------AT-T-TTACACAAtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAG---GAATT----TTGTG--TAA-TC-tcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-C-TTACACAA
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132196 : -ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-ctctag
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACAC
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132199 : ATTTC-ACGA-AA-TC-------A-TTTCAT--TG---TGTGTA--AAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AG---TGATT----TCATG--AAA-TC-ACT---AAA--TG--AAAC--TG------AT-T-TCACta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACAC
gi|132200 : atttcacgaaatcatttcattg-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACAC
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T----------GATT----TCGTG--AAA-T---CTG-GAAA--caatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--T------------------TTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC------AT-T-TTACACAA
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA------AT-T-TCACAAAA
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-T
gi|132203 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagttttagggATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-Tg
gi|132204 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaag-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA------AT-T-TCACAAAA
gi|132205 : A--AATCCC--AGTCAGGATT----TTGTG--AAA-TT-ACTG-G------G--GCACTTTTCCAGTGAT-T-TCACGAAAtcctgactgggattt
gi|132206 : atttcatgaaatcactaaaaactctcgggaACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA------AT-T-TCACAAAA
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGA-TTTCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------G---GGATT----TCGTG---AA-TC-ACTGCGAAA--TG--A---CTTC-------T-T-TTACACAAt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTGA-AAA-TCAACTG-GAAA--TGAAACACTCTC------AT-TGTTACA
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGA-ATTC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--AT---GAATTTAAATTGTA--AAA-Tacaa
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132213 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagttttagggATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTG--AAA-g
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGA-ATTCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AAC-CT--A----GTATT----TCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTC-G--GGA-ATT-GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A----GGATT----T-GTG--AAA-TC-AC-G-GAAA--TG----ACCTTCT-----ATCT-TTACAC
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAA-ATTCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AG---GTATT----TCGTG--AAACTC-ACTG-AAAA--
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAA-ATACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AG---AGATT----ATGTG--AAA-TC-CCTG-AAAA--T
gi|132219 : A-TTTCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AG---GGATT----TCGTG--AAC-TC-ACTG-GAAA--TG--ACACCTTT------AT-T-TTACGCAA
gi|132220 : TTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132221 : ACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132222 : ACT-G----TGTA-ACT-----A--G-------GA-ATTTCGC-GAAA-TC--TCT---AAA--ACTTTC--AA---GAAAT----TCGTG--AAA-TC-ACTG-
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----
gi|132223 : actgtgtaactaggaACT-G----TGTA-ACT-----A--G-------AG-ATTTCGT-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ATTG-
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----
gi|132224 : actgtgtaactagagACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTT--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132224 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----
gi|132225 : actgtgtaactagggACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACAC
Alignments
lowQualScore : 11111111
lowQualScore : 1 1 1 2 33 1 11 1 4444 1 00000000 6666666666 1 1 11 111 11 11 111 2222 22 1 1 1 77 33 2 2 2 2
lowQualScore : . . . . .. . .. . .... . ........ .......... . . .. ... .. .. ... .... .. . . . .. .. . . . .
lowQualScore : 2 2 2 6 22 2 55 0 4444 1 00000000 8888888888 1 1 44 888 44 44 888 2222 44 0 3 4 55 22 7 7 7 7
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAA
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAAtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAG---GAATT----TTGTG--TAA-TC-tcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-C-TTAC-ACAA
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132196 : -ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-ctctag
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132199 : ATTTC-ACGA-AA-TC-------A-TTTCAT--TG---TGTGTA--AAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AG---TGATT----TCATG--AAA-TC-ACT---AAA--TG--AAAC--TG-AT-T-TCAC-ta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : atttcacgaaatcatttcattg-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T----------GATT----TCGTG--AAA-T---CTG-GAAA--caatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--T------------------TTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-T
gi|132203 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagttttagggATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-Tg
gi|132204 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaag-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132205 : A--AATCCC--AGTCAGGATT----TTGTG--AAA-TT-ACTG-G------G--GCACTTTtcctgactgggattt
gi|132206 : atttcatgaaatcactaaaaactctcgggatttcgtgaaatcactggaACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGA-TTTCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------G---GGATT----TCGTG---AA-TC-ACTGCGAAA--TG--A---CTTC--T-T-TTAC-ACAAt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTGA-AAA-TCAACTG-GAAA--TGAAACACTCTC-AT-TGTTACAACAA
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGA-ATTC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--AT---GAATTTAAATTGTA--AAA-T
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132213 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagttttagggATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTG--AAA-g
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGA-ATTCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AAC-CT--A----GTATT----TCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTC-G--GGA-ATT-GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A----GGATT----T-GTG--AAA-TC-AC-G-GAAA--TG----ACCTTCTATCT-TTAC-ACA
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAA-ATTCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AG---GTATT----TCGTG--AAACTC-ACTG-AAAA--
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAA-ATACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AG---AGATT----ATGTG--AAA-TC-CCTG-AAAA--T
gi|132219 : A-TTTCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AG---GGATT----TCGTG--AAC-TC-ACTG-GAAA--TG--ACACCTTT-AT-T-TTAC-GCAA
gi|132220 : TTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132221 : ACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132222 : ACT-G----TGTA-ACT-----A--G-------GA-ATTTCGC-GAAA-TC--TCT---AAA--ACTTTC--AA---GAAAT----TCGTG--AAA-TC-ACTG-
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----
gi|132223 : actgtgtaactaggaACT-G----TGTA-ACT-----A--G-------AG-ATTTCGT-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ATTG-
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----
gi|132224 : actgtgtaactagagACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTT--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132224 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----
gi|132225 : actgtgtaactagggACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACAC
Alignments
lowQualScore : 11111111
lowQualScore : 1 1 1 2 33 1 11 1 4444 1 00000000 6666666666 1 1 11 111 11 11 111 2222 22 1 1 1 77 33 2 2 2 2
lowQualScore : . . . . .. . .. . .... . ........ .......... . . .. ... .. .. ... .... .. . . . .. .. . . . .
lowQualScore : 2 2 2 6 22 2 55 0 4444 1 00000000 8888888888 1 1 44 888 44 44 888 2222 44 0 3 4 55 22 7 7 7 7
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAA
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAAtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAG---GAATT----TTGTG--TAA-TC-tcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-C-TTAC-ACAA
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132196 : -ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-ctctag
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132199 : ATTTC-ACGA-AA-TC-------A-TTTCAT--TG---TGTGTA--AAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AG---TGATT----TCATG--AAA-TC-ACT---AAA--TG--AAAC--TG-AT-T-TCAC-ta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : atttcacgaaatcatttcattg-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T----------GATT----TCGTG--AAA-T---CTG-GAAA--caatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--T------------------TTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-T
gi|132203 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagttttagggATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-Tg
gi|132204 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaag-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132205 : A--AATCCC--AGTCAGGATT----TTGTG--AAA-TT-ACTG-G------G--GCACTTTtcctgactgggattt
gi|132206 : atttcatgaaatcactaaaaactctcgggatttcgtgaaatcactggaACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGA-TTTCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------G---GGATT----TCGTG---AA-TC-ACTGCGAAA--TG--A---CTTC--T-T-TTAC-ACAAt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTGA-AAA-TCAACTG-GAAA--TGAAACACTCTC-AT-TGTTACAACAA
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGA-ATTC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--AT---GAATTTAAATTGTA--AAA-T
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132213 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagttttagggATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTG--AAA-g
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGA-ATTCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AAC-CT--A----GTATT----TCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTC-G--GGA-ATT-GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A----GGATT----T-GTG--AAA-TC-AC-G-GAAA--TG----ACCTTCTATCT-TTAC-ACA
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAA-ATTCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AG---GTATT----TCGTG--AAACTC-ACTG-AAAA--
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAA-ATACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AG---AGATT----ATGTG--AAA-TC-CCTG-AAAA--T
gi|132219 : A-TTTCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AG---GGATT----TCGTG--AAC-TC-ACTG-GAAA--TG--ACACCTTT-AT-T-TTAC-GCAA
gi|132220 : TTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132221 : ACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132222 : ACT-G----TGTA-ACT-----A--G-------GA-ATTTCGC-GAAA-TC--TCT---AAA--ACTTTC--AA---GAAAT----TCGTG--AAA-TC-ACTG-
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----
gi|132223 : actgtgtaactaggaACT-G----TGTA-ACT-----A--G-------AG-ATTTCGT-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ATTG-
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----
gi|132224 : actgtgtaactagagACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTT--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132224 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----
gi|132225 : actgtgtaactagggACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACAC
blockSeqs : A G A G AA T GA A GAAA A TATA CAATACATGA G T TT GCA TC TC TCA TAAA AT C A C AG AA T C G A
blockSeqs : . . . C AA . . . GAAA . TATA TTG . . . . . . . . A . . . AG . . . . .
blockSeqs : . . . . . . . . . . TCCA TA . . . . . . . . . . . . AG . . . . .
blockSeqs : . . . . . . . . . . TATA CC . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TATA TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TATA TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . ATA TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TAA TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . ATA TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TGT TG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TC . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA CT . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA CT . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA CT . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA GA . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA GA . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TG . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TG . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA AC . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA GA . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TG . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TG . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . CG GG . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA CA . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . TA TA . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . T TG . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . T GA . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . T AG . . . . . . . . . . .
blockSeqs : . . . . . . . . . . A GG . . . . . . . . . . .
blockSeqs : . . . . . . . . . . A GG . . . . . . . . . .
blockSeqs : . . . . . . . . . A TG . . . . . . . . . .
blockSeqs : . . . . . . . A . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqCons :
originalCons : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
finalCons : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
Alignments
lowQualScore : 11111111
lowQualScore : 1 1 1 2 33 1 11 1 4444 1 00000000 6666666666 1 1 11 111 11 11 111 2222 22 1 1 1 77 33 2 2 2 2
lowQualScore : . . . . .. . .. . .... . ........ .......... . . .. ... .. .. ... .... .. . . . .. .. . . . .
lowQualScore : 2 2 2 6 22 2 55 0 4444 1 00000000 8888888888 1 1 44 888 44 44 888 2222 44 0 3 4 55 22 7 7 7 7
consensus : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
Reference ( family-550 ) : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132191 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAA
gi|132192 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132193 : -ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTCC-AT-T-TTAC-ACAAtcctag
gi|132193 : ATTTC-ATGA-AA-TCACTAA-AAACTCTAG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------CC-ATTTTAC-ACAA-TCTTGCT---AGT--TATTTTTCAG---GAATT----TTGTG--TAA-TC-tcttgctagttatttttcaggaattttgtgtaatc
gi|132194 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-C-TTAC-ACAA
gi|132195 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACTTAT--A--G-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132196 : -ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-ctctag
gi|132197 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132198 : ATTTC-GCAA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-T
gi|132199 : ATTTC-ACGA-AA-TC-------A-TTTCAT--TG---TGTGTA--AAATGAAG-G----TGTC-ATT--TCCA--G-------TG-ATTTCAC-GAAA-TC--CCT---AGA--GTTCTT--AG---TGATT----TCATG--AAA-TC-ACT---AAA--TG--AAAC--TG-AT-T-TCAC-ta
gi|132199 : GTG--AAATCA---G----TTTC-ATT--T--A--G-------TG-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : atttcacgaaatcatttcattg-ATTTCAT-GAAA-TC--ACT---AAG--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACA
gi|132200 : ATTTC-ATGA-AA-TCACTAAGAACTCT-AG--GGA-TTTCGTG--AAATCACT-GGAAATGAC-ACC--T-------------TC-ATTTTAC-ACA---C--AAT---GAA--A--T----------GATT----TCGTG--AAA-T---CTG-GAAA--caatgaaatgatttcgtgaaatctggaaa
gi|132201 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--T------------------TTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACACCTTC-AT-T-TTAC-ACAA
gi|132202 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132203 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-T
gi|132203 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132204 : atttcacgaaatcccgagagtttttagtgatttcatgaaatagctaagtgaaacagtgatttcacgaattccctgaaagttttagggATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----TTTT-ACT--------------------TTTCAT-GAAA-TA--TCT---ATA--AACTCT--AG---AAATT----TCGTG--AAA-Tg
gi|132204 : CT--AG---GGATT----TCGCG--AAA-TC-CCTA-AAAccctag
gi|132205 : atttcacgaaatttctagagtttatagatatttcatgaaaagtaaaacagtgatttcacgaattccctaaaag-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132205 : A--AATCCC--AGTCAGGATT----TTGTG--AAA-TT-ACTG-G------G--GCACTTTtcctgactgggattt
gi|132206 : atttcatgaaatcactaaaaactctcgggatttcgtgaaatcactggaACTTTCAG--GGA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------CT-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--CG---GGATT----TCGTG--AAA-TC-ACTG-GAAAAGTG--CCCCAGTA-AT-T-TCAC-AAAA
gi|132207 : aATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAAT
gi|132207 : ATTTC-ACGA-AT-TCCCTAA-AAGTTTTAG--GGA-TTTCGCG--AAATCCCTAG----TTAC-ACccctagttacac
gi|132208 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132209 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AA
gi|132210 : ATTTC-GCGA-AA-TC--TAA-AACTTTCAG--GGATAATCGTG--AAATCA--------TTTC-ACT--T--A--G-------TG-ATTTCAT-GAAA-TC--------AAATCAAC------G---GGATT----TCGTG---AA-TC-ACTGCGAAA--TG--A---CTTC--T-T-TTAC-ACAAt
gi|132211 : ATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTGA-AAA-TCAACTG-GAAA--TGAAACACTCTC-AT-TGTTACAACAA
gi|132212 : ATTTC-ATGA-AA-TCCCTAA-AACTTTAAG--GGA-ATTC-----AA--CACA-G----TTTT-ACT--TA-A--G-------AC-ATTTCAT-AAAA-TC--CCT---AAA--AACTCA--AT---GAATTTAAATTGTA--AAA-T
gi|132213 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GAA-ATTCATG--AAATCCCT-G----TTTC-ACA--T--A--G-------GA-ATTTCAT-GAAA-TC--ACT---AAA--AATTCT--AG---GGATT----TGGTG--AAA-
gi|132213 : ATTTC-GCGA-AA-TCCCTAccctag
gi|132214 : tttcaccaaatccctagaatttttagtgatttcatgaaattcctatgtgaaacagggatttcatgaatttcctgaaagttttagggATTTC-GCGA-AA-TCCCTGA-AACTTTCAGAAGGA-ATTCGTG--AAATCACT-T----CGTA-ACTA-T--A--G-------TG-CATTCAT-G-AA-TC--AC----AAA--GACTCC--TA---GGATT----TCGTG--AAA-g
gi|132215 : TTTCAGCGAGAA-TCCCTAACAACTTTCAG--GGA-ATTCGTGGAAAATCACT-G----TTTC-ACG--T--GT-GT------TG-ATTTCATGGAAA-TC--ACTGCAAGA--AAC-CT--A----GTATT----TCGTAATAGA-TC-ACgcac
gi|132216 : TTC-GTGA-AA-TCCCT-A-AACTTTC-G--GGA-ATT-GTG--AAATC-CT-G----TTTC-ACTTAT--A--G-------TG---TTCAT-G-AA-CC--ACT----AA--AACTCT--A----GGATT----T-GTG--AAA-TC-AC-G-GAAA--TG----ACCTTCTATCT-TTAC-ACA
gi|132217 : TC-ACGA-AAATCCCTAC-AAATTTCAG--GAA-ATTCGTG---AATAACT-G----TTTCAACT--T--A--GCAATACATGAATTTCAT-GAAATTC--ACT---AAT--AACGCG--AG---GTATT----TCGTG--AAACTC-ACTG-AAAA--
gi|132218 : -GCGT-AA-TTCCTGA-ATATTTCAG--TAA-ATACACG--TAATCCCC-A----TTTC-ATT--C--G--G-------GG-GTTTCAC-GTAA-TC--ACT---GAA--ATATAC--AG---AGATT----ATGTG--AAA-TC-CCTG-AAAA--T
gi|132219 : A-TTTCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-A----TCTC-ACT--T--A--G-------CA-ATTACAT-GATA-TC--AAT---AAA--AACTCT--AG---GGATT----TCGTG--AAC-TC-ACTG-GAAA--TG--ACACCTTT-AT-T-TTAC-GCAA
gi|132220 : TTTCAA--GAA-ATTCGTG--AAATCACT-G----TTTC-ACT--T--A--G-------TA-ATTTCAT-GAAA-TC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132221 : ACTTTCAG--GGA-ATTCGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--T
gi|132222 : ACT-G----TGTA-ACT-----A--G-------GA-ATTTCGC-GAAA-TC--TCT---AAA--ACTTTC--AA---GAAAT----TCGTG--AAA-TC-ACTG-
gi|132222 : ATTTC-GCGA-AA-TCTCTAA-AACTTTCAA--GAA-ATTCGTG--AAATCACT-G----
gi|132223 : actgtgtaactaggaACT-G----TGTA-ACT-----A--G-------AG-ATTTCGT-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ATTG-
gi|132223 : ATTTC-GTGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCATT-G----
gi|132224 : actgtgtaactagagACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTT--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132224 : ATTTC-GCGA-AA-TCCCTAA-AACTTTTAG--GGA-ATTCGTG--AAATCACT-G----
gi|132225 : actgtgtaactagggACT-G----TGTA-ACT-----A--G-------GG-ATTTCGC-GAAA-TC--CCT---AAA--ACTTTC--AG---GGAAT----TCGTG--AAA-TC-ACTG-
gi|132225 : ATTTC-GCGA-AA-TCCCTAA-AACTTTCAG--GGA-ATTCGTG--AAATCACT-G----
gi|132226 : actgtgtaactagggGTG--AAATCATT-G----TTTC-ACT--T--ATAG-------TG-ATTTCAT-GAAA-CC--ACT---AAA--AACTCT--AG---GGATT----TCGTG--AAA-TC-ACTG-GAAA--TG--ACAC