lowQualScore : 0 0 111111 0 0 0 0 0 000 0 0 0 0
lowQualScore : . . ...... . . . . . ... . . . .
lowQualScore : 4 4 222222 4 4 4 4 8 777 4 4 4 4
consensus : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
Reference ( gi|61918 ) : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61925 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61920 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61919 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61917 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61916 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61915 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61951 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-CGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61950 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CGAC-AACAACTTGTCTGT
gi|61958 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAT-AACAACTTGTCTGT
gi|61955 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61928 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61927 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61912 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61911 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61909 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61980 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61978 : TTATAAC-CAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61968 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-GAAAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61981 : TTATAAC-GAC-CATAGTATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61904 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTCTGT
gi|61991 : TTATAAC-GAC-CATAGAATT--------ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62004 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACAACTTGTCTGT
gi|62003 : TCATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACCTGTCTG
gi|62005 : TTATGAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAACAAACAACTTGTCTGT
gi|62020 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTCTGT
gi|62013 : TTTTAAC-GAC-CATAGAACT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62009 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCATT-AAA-CGTG---ACCGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61942 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61939 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61938 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61944 : TTATAAC-GAC-CATAGAATA------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62032 : TTATAAC-GAC-CATAGAATT------T-ATGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAACTTGCCTGT
gi|62033 : TTATAAC-GGC-CATAGAATT------T-ACGAA--TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62036 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CTTG---ACTGGT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62039 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGCCTGCCTTTTAAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61986 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCACTG-CAAC-AACAACTTGTTTGT
gi|61984 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ATTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61992 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGCG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTGT
gi|61963 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTTTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61933 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---GCTGTT-G-AAACCCCTG-CAAC-AACAACGTGTTTGT
gi|62057 : TTATAAC-GAC-CATAAAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTAT
gi|62021 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGAT-G-AAACTTCTG-CAAC-AACAACTTGTTTGT
gi|62041 : TTATAAC-GAC-CATATAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTTTT-G-AGACCCCTG-CAAC-AACAACTTGTCTGT
gi|61959 : TTATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTG
gi|61908 : TTATAAC-GAC-CATAGAATT------T-GAGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62045 : TTATAAC-GGC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-GAACCCCTG-CAAC-AATAACTTGTTT
gi|61967 : TTGTAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AGACCCCTG-CAAC-AACAACTTGTTTGT
gi|61998 : TTGTAAG-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTAGTTTGT
gi|61999 : TTATAAC-GAC-CATGGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACATGATTGT
gi|61931 : TTGTAAT-GAC-TATAGAATT------T-GCGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62048 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TACCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----C-AACAACTTGCTTGT
gi|61985 : TTACAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-T-AGAACCCTG-CAAC-AACAACTTGTTTGT
gi|62035 : TTGTAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CATG---AATGTT-G-AAACCTCTG-CAAC-AACAACTTGTTTG
gi|62065 : TTGTAACCAAT-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGT
gi|62046 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCTTTT-AAA-CGTG---ACTGTT-C-TAACCCCCG-CAAC-AACAACTTGTTTGTt
gi|61993 : TTATAAC-GAC-CATAGAATT------T-GCCAAA-TGT-TGCCTTT-AAA-CGTG---AATATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61974 : TTATAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGTCTTT-AAG-CGTG---ACTGTT-G-TAATCCCTG-CAAC-ATCAACTTGTCTG
gi|62028 : TTATAAC-GAC-CATAGATTT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG----C-AACAACTTGTTTGT
gi|62037 : TTGTAAC-GAC-CATAGAATG------T-GCAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCCGTG-CAAC-AACAGCTTGTTTGT
gi|62044 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-CGC-TGCCTTA-CAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-AACAACTTGTTTGT
gi|62042 : TTGTAAC-GAC-CGTAGAATT------T-GCAAAA-AGC-TGCCTTT-GAA-CGTG---ACTGTT-G-AAACCCCTG-CATC-AACAACTTGTTTGT
gi|61936 : TTTTAAC-GAC-CATAGAATT------TTGCAAAA-TGC-TGCCTTT-AAA-CGCG---ATTGTT-G-AAACCCTTG-CAAC-AACAACTTGTTTGT
gi|61907 : TTATAAC-GAC-CACACAATT------A-GCGAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|62030 : TTATAAC-GAT-CATAGAATT------T-GCGAAAATGC-TGCCTTT-AAA-AGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAAGTTGTTTAT
gi|61988 : TTA-AAC-AAT-CATAGAATT------T-GCTAAA-TGC-TGTCTTT-AAA-CGTG---ACTATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61906 : TTGTAAC-GGC-CATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG-CAAT-ACCAACTTGTTTGT
gi|62062 : TTATAAC-GAC-CATAGAATT------T-GCACAA-TGC-TGTTTTT-AAA-CGTG---ACTGTT-G-AAACCTCTG-CAAC-TACAACTTGCTTGT
gi|61994 : TTATAAC-GAC-CATAGAACT------T-GCGAAA-TTC-TTACTTT-CAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAGCTTGTTTGT
gi|61935 : TTATAAC-GAT-CACAGAATT------T-GCGAAA-TGC-TGACTCT-AAA-CGTG---ACTGTT-G-AAACCCCTT-TAAC-AATAACTTGCTTG
gi|62024 : TTATAAC-AAT-CATAGAATT------T-GCGAAA-TAC-TGACTAT-AAA-CGTG---ACTGTG-A-AAATCCCTG-CAAC-AACAACTTGTTTGT
gi|62022 : TTATAAT-GAC-CATAGAATT------T-GCAAAA-CAC-TTACTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CTAC-AACAACTTGTTTGT
gi|62034 : TCATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-GGACCTT-AAG-CATG---ACTGTT-G-AAACCCCTG-CAAC-AAC-ACTTGTTTGT
gi|62038 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-CGTT---ACTGTTAG-AAACCCTT--CAAC-ATCAACTTGTTTGT
gi|62055 : TTATAAC-AAC-CATAGCATT------T-GCAAAA-TGC-TGACTGT-AAA-CGTG---ACTG---G-AAACCCTTG-CAAC-AGCAACTTGTTTGT
gi|61971 : TTATAGC-GCC-AATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-TGTA---AGTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61966 : TTATAAC-AAC-CATAAAATT------T-GCGAAA-TGT-TGACTTT-AAA-CGTG---ACTGTT-C-GAACCCATG-TAAC-ATCAACTTGTTTG
gi|61987 : TTTTAAC-GAT-AATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTA---ACTATT-G-AAATCCCTG-CAAC-ATCAACTTGGTTGT
gi|61926 : TTATAAC-GAC-CCTAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTG---ATTGTT-G-AAATCTCTG-AAAC-ATCAACATGTTT
gi|62050 : TTATAAC-GAC-CATAGAATT------T-GCAAAA-TAC-TTAATTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CACC-ATCAACTT
gi|61947 : TTATAAC-AAT-CAGTGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-ATGAACTTGTTTGT
gi|62023 : TTATAAC-GGC-CATAGAATT------T-GTGAAA-TGC-TGACTTT-AAA-AGAG---ACAGTT-G-AAACCCCTG-TAAT-ATCAATTTGTTTGT
gi|62029 : TTATAAC-GAC-CATAGAATTAGAATTT-GCAAAA-TGC-TGACATT-AAA-CGTGCCAACTGCT-G-AAACCCCTG-CAAC-ATCAATTTGTTTGT
gi|62027 : TTAGAAC-GAT-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-TGTG---ACTTTT-G-AAATCCCTG-CAAC-ATCAACTAGTTTG
gi|62058 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGAG---ATTGTT-G-AAACCCATGTCAA--ATCAATTTATTTGT
gi|62059 : TTATAAC-AAC-CATAGAATT------T-GCAAAA-TGA-TGACTTT-AAG-CGAG---AGTGTT-G-AAACACCTG-CAAC-ATCAATTTGTTTGT
gi|62331 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62335 : TATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62339 : TACAGC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTTTGT
gi|62328 : TATAAC-GAT-CATAGGATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAGC-AACAACTTGTTTGT
gi|62340 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACGACTTGTTTGT
gi|62332 : TGTATC-GAT-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTATTTGT
gi|62338 : TATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-AAAC-AACAACGTGTTTGT
gi|62333 : TATAAC-AAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----T-AACAACTTGTTTG
gi|62327 : TATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-TGACTTA-AAA-CGAG---ACTGTT-G-AAACCCCTG-TACC-ATCAACTTGTTT
gi|62377 : ATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62380 : ACAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TTCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62376 : ATAAC-GAC-CACAGCATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-C-AAACCCATG-CAAC-ATCAACTTGTTTGT
gi|62384 : ATAAC-AACTCATAGAATT------T-GCAAAA-TGC-TGATTTT-AAA-CGTG---ACTGTT-C-AAACTCCTA-CAAC-ACCAACTTGCTTGT
gi|62401 : TAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G--AACCCCTG-CAAC-AACAACTTGTCTGT
Alignments
lowQualScore : 0 0 111111 0 0 0 0 0 000 0 0 0 0
lowQualScore : . . ...... . . . . . ... . . . .
lowQualScore : 4 4 222222 4 4 4 4 8 777 4 4 4 4
consensus : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
Reference ( family-55 ) : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61904 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTCTGT
gi|61906 : TTGTAAC-GGC-CATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG-CAAT-ACCAACTTGTTTGT
gi|61907 : TTATAAC-GAC-CACACAATT------A-GCGAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61908 : TTATAAC-GAC-CATAGAATT------T-GAGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61909 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61911 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61912 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61915 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61916 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61917 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61918 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61919 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61920 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61925 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61926 : TTATAAC-GAC-CCTAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTG---ATTGTT-G-AAATCTCTG-AAAC-ATCAACATGTTT
gi|61927 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61928 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61931 : TTGTAAT-GAC-TATAGAATT------T-GCGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61933 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---GCTGTT-G-AAACCCCTG-CAAC-AACAACGTGTTTGT
gi|61935 : TTATAAC-GAT-CACAGAATT------T-GCGAAA-TGC-TGACTCT-AAA-CGTG---ACTGTT-G-AAACCCCTT-TAAC-AATAACTTGCTTG
gi|61936 : TTTTAAC-GAC-CATAGAATT------TTGCAAAA-TGC-TGCCTTT-AAA-CGCG---ATTGTT-G-AAACCCTTG-CAAC-AACAACTTGTTTGT
gi|61938 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61939 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61942 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61944 : TTATAAC-GAC-CATAGAATA------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61947 : TTATAAC-AAT-CAGTGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-ATGAACTTGTTTGT
gi|61950 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CGAC-AACAACTTGTCTGT
gi|61951 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-CGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61955 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61958 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAT-AACAACTTGTCTGT
gi|61959 : TTATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTG
gi|61963 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTTTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61966 : TTATAAC-AAC-CATAAAATT------T-GCGAAA-TGT-TGACTTT-AAA-CGTG---ACTGTT-C-GAACCCATG-TAAC-ATCAACTTGTTTG
gi|61967 : TTGTAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AGACCCCTG-CAAC-AACAACTTGTTTGT
gi|61968 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-GAAAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61971 : TTATAGC-GCC-AATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-TGTA---AGTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61974 : TTATAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGTCTTT-AAG-CGTG---ACTGTT-G-TAATCCCTG-CAAC-ATCAACTTGTCTG
gi|61978 : TTATAAC-CAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61980 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61981 : TTATAAC-GAC-CATAGTATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61984 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ATTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61985 : TTACAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-T-AGAACCCTG-CAAC-AACAACTTGTTTGT
gi|61986 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCACTG-CAAC-AACAACTTGTTTGT
gi|61987 : TTTTAAC-GAT-AATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTA---ACTATT-G-AAATCCCTG-CAAC-ATCAACTTGGTTGT
gi|61988 : TTA-AAC-AAT-CATAGAATT------T-GCTAAA-TGC-TGTCTTT-AAA-CGTG---ACTATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61991 : TTATAAC-GAC-CATAGAATT--------ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61992 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGCG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTGT
gi|61993 : TTATAAC-GAC-CATAGAATT------T-GCCAAA-TGT-TGCCTTT-AAA-CGTG---AATATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61994 : TTATAAC-GAC-CATAGAACT------T-GCGAAA-TTC-TTACTTT-CAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAGCTTGTTTGT
gi|61998 : TTGTAAG-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTAGTTTGT
gi|61999 : TTATAAC-GAC-CATGGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACATGATTGT
gi|62003 : TCATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACCTGTCTG
gi|62004 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACAACTTGTCTGT
gi|62005 : TTATGAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAACAAACAACTTGTCTGT
gi|62009 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCATT-AAA-CGTG---ACCGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62013 : TTTTAAC-GAC-CATAGAACT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62020 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTCTGT
gi|62021 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGAT-G-AAACTTCTG-CAAC-AACAACTTGTTTGT
gi|62022 : TTATAAT-GAC-CATAGAATT------T-GCAAAA-CAC-TTACTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CTAC-AACAACTTGTTTGT
gi|62023 : TTATAAC-GGC-CATAGAATT------T-GTGAAA-TGC-TGACTTT-AAA-AGAG---ACAGTT-G-AAACCCCTG-TAAT-ATCAATTTGTTTGT
gi|62024 : TTATAAC-AAT-CATAGAATT------T-GCGAAA-TAC-TGACTAT-AAA-CGTG---ACTGTG-A-AAATCCCTG-CAAC-AACAACTTGTTTGT
gi|62027 : TTAGAAC-GAT-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-TGTG---ACTTTT-G-AAATCCCTG-CAAC-ATCAACTAGTTTG
gi|62028 : TTATAAC-GAC-CATAGATTT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG----C-AACAACTTGTTTGT
gi|62029 : TTATAAC-GAC-CATAGAATTAGAATTT-GCAAAA-TGC-TGACATT-AAA-CGTGCCAACTGCT-G-AAACCCCTG-CAAC-ATCAATTTGTTTGT
gi|62030 : TTATAAC-GAT-CATAGAATT------T-GCGAAAATGC-TGCCTTT-AAA-AGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAAGTTGTTTAT
gi|62032 : TTATAAC-GAC-CATAGAATT------T-ATGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAACTTGCCTGT
gi|62033 : TTATAAC-GGC-CATAGAATT------T-ACGAA--TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62034 : TCATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-GGACCTT-AAG-CATG---ACTGTT-G-AAACCCCTG-CAAC-AAC-ACTTGTTTGT
gi|62035 : TTGTAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CATG---AATGTT-G-AAACCTCTG-CAAC-AACAACTTGTTTG
gi|62036 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CTTG---ACTGGT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62037 : TTGTAAC-GAC-CATAGAATG------T-GCAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCCGTG-CAAC-AACAGCTTGTTTGT
gi|62038 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-CGTT---ACTGTTAG-AAACCCTT--CAAC-ATCAACTTGTTTGT
gi|62039 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGCCTGCCTTTTAAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62041 : TTATAAC-GAC-CATATAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTTTT-G-AGACCCCTG-CAAC-AACAACTTGTCTGT
gi|62042 : TTGTAAC-GAC-CGTAGAATT------T-GCAAAA-AGC-TGCCTTT-GAA-CGTG---ACTGTT-G-AAACCCCTG-CATC-AACAACTTGTTTGT
gi|62044 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-CGC-TGCCTTA-CAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-AACAACTTGTTTGT
gi|62045 : TTATAAC-GGC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-GAACCCCTG-CAAC-AATAACTTGTTT
gi|62046 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCTTTT-AAA-CGTG---ACTGTT-C-TAACCCCCG-CAAC-AACAACTTGTTTGT
gi|62048 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TACCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----C-AACAACTTGCTTGT
gi|62050 : TTATAAC-GAC-CATAGAATT------T-GCAAAA-TAC-TTAATTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CACC-ATCAACTT
gi|62055 : TTATAAC-AAC-CATAGCATT------T-GCAAAA-TGC-TGACTGT-AAA-CGTG---ACTG---G-AAACCCTTG-CAAC-AGCAACTTGTTTGT
gi|62057 : TTATAAC-GAC-CATAAAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTAT
gi|62058 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGAG---ATTGTT-G-AAACCCATGTCAA--ATCAATTTATTTGT
gi|62059 : TTATAAC-AAC-CATAGAATT------T-GCAAAA-TGA-TGACTTT-AAG-CGAG---AGTGTT-G-AAACACCTG-CAAC-ATCAATTTGTTTGT
gi|62062 : TTATAAC-GAC-CATAGAATT------T-GCACAA-TGC-TGTTTTT-AAA-CGTG---ACTGTT-G-AAACCTCTG-CAAC-TACAACTTGCTTGT
gi|62065 : TTGTAACCAAT-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTT
gi|62327 : TATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-TGACTTA-AAA-CGAG---ACTGTT-G-AAACCCCTG-TACC-ATCAACTTGTTT
gi|62328 : TATAAC-GAT-CATAGGATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAGC-AACAACTTGTTTGT
gi|62331 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62332 : TGTATC-GAT-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTATTTGT
gi|62333 : TATAAC-AAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----T-AACAACTTGTTTG
gi|62335 : TATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62338 : TATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-AAAC-AACAACGTGTTTGT
gi|62339 : TACAGC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTTTGT
gi|62340 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACGACTTGTTTGT
gi|62376 : ATAAC-GAC-CACAGCATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-C-AAACCCATG-CAAC-ATCAACTTGTTTGT
gi|62377 : ATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62380 : ACAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TTCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62384 : ATAAC-AACTCATAGAATT------T-GCAAAA-TGC-TGATTTT-AAA-CGTG---ACTGTT-C-AAACTCCTA-CAAC-ACCAACTTGCTTGT
gi|62401 : TAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G--AACCCCTG-CAAC-AACAACTTGTCTGT
Alignments
lowQualScore : 0 0 111111 0 0 0 0 0 000 0 0 0 0
lowQualScore : . . ...... . . . . . ... . . . .
lowQualScore : 4 4 222222 4 4 4 4 8 777 4 4 4 4
consensus : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
Reference ( family-55 ) : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61904 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTCTGT
gi|61906 : TTGTAAC-GGC-CATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG-CAAT-ACCAACTTGTTTGT
gi|61907 : TTATAAC-GAC-CACACAATT------A-GCGAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61908 : TTATAAC-GAC-CATAGAATT------T-GAGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61909 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61911 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61912 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61915 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61916 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61917 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61918 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61919 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61920 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61925 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61926 : TTATAAC-GAC-CCTAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTG---ATTGTT-G-AAATCTCTG-AAAC-ATCAACATGTTT
gi|61927 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61928 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61931 : TTGTAAT-GAC-TATAGAATT------T-GCGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61933 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---GCTGTT-G-AAACCCCTG-CAAC-AACAACGTGTTTGT
gi|61935 : TTATAAC-GAT-CACAGAATT------T-GCGAAA-TGC-TGACTCT-AAA-CGTG---ACTGTT-G-AAACCCCTT-TAAC-AATAACTTGCTTG
gi|61936 : TTTTAAC-GAC-CATAGAATT------TTGCAAAA-TGC-TGCCTTT-AAA-CGCG---ATTGTT-G-AAACCCTTG-CAAC-AACAACTTGTTTGT
gi|61938 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61939 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61942 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61944 : TTATAAC-GAC-CATAGAATA------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61947 : TTATAAC-AAT-CAGTGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-ATGAACTTGTTTGT
gi|61950 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CGAC-AACAACTTGTCTGT
gi|61951 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-CGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61955 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61958 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAT-AACAACTTGTCTGT
gi|61959 : TTATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTG
gi|61963 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTTTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61966 : TTATAAC-AAC-CATAAAATT------T-GCGAAA-TGT-TGACTTT-AAA-CGTG---ACTGTT-C-GAACCCATG-TAAC-ATCAACTTGTTTG
gi|61967 : TTGTAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AGACCCCTG-CAAC-AACAACTTGTTTGT
gi|61968 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-GAAAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61971 : TTATAGC-GCC-AATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-TGTA---AGTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61974 : TTATAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGTCTTT-AAG-CGTG---ACTGTT-G-TAATCCCTG-CAAC-ATCAACTTGTCTG
gi|61978 : TTATAAC-CAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61980 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61981 : TTATAAC-GAC-CATAGTATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61984 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ATTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61985 : TTACAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-T-AGAACCCTG-CAAC-AACAACTTGTTTGT
gi|61986 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCACTG-CAAC-AACAACTTGTTTGT
gi|61987 : TTTTAAC-GAT-AATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTA---ACTATT-G-AAATCCCTG-CAAC-ATCAACTTGGTTGT
gi|61988 : TTA-AAC-AAT-CATAGAATT------T-GCTAAA-TGC-TGTCTTT-AAA-CGTG---ACTATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61991 : TTATAAC-GAC-CATAGAATT--------ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61992 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGCG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTGT
gi|61993 : TTATAAC-GAC-CATAGAATT------T-GCCAAA-TGT-TGCCTTT-AAA-CGTG---AATATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61994 : TTATAAC-GAC-CATAGAACT------T-GCGAAA-TTC-TTACTTT-CAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAGCTTGTTTGT
gi|61998 : TTGTAAG-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTAGTTTGT
gi|61999 : TTATAAC-GAC-CATGGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACATGATTGT
gi|62003 : TCATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACCTGTCTG
gi|62004 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACAACTTGTCTGT
gi|62005 : TTATGAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAACAAACAACTTGTCTGT
gi|62009 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCATT-AAA-CGTG---ACCGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62013 : TTTTAAC-GAC-CATAGAACT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62020 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTCTGT
gi|62021 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGAT-G-AAACTTCTG-CAAC-AACAACTTGTTTGT
gi|62022 : TTATAAT-GAC-CATAGAATT------T-GCAAAA-CAC-TTACTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CTAC-AACAACTTGTTTGT
gi|62023 : TTATAAC-GGC-CATAGAATT------T-GTGAAA-TGC-TGACTTT-AAA-AGAG---ACAGTT-G-AAACCCCTG-TAAT-ATCAATTTGTTTGT
gi|62024 : TTATAAC-AAT-CATAGAATT------T-GCGAAA-TAC-TGACTAT-AAA-CGTG---ACTGTG-A-AAATCCCTG-CAAC-AACAACTTGTTTGT
gi|62027 : TTAGAAC-GAT-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-TGTG---ACTTTT-G-AAATCCCTG-CAAC-ATCAACTAGTTTG
gi|62028 : TTATAAC-GAC-CATAGATTT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG----C-AACAACTTGTTTGT
gi|62029 : TTATAAC-GAC-CATAGAATTAGAATTT-GCAAAA-TGC-TGACATT-AAA-CGTGCCAACTGCT-G-AAACCCCTG-CAAC-ATCAATTTGTTTGT
gi|62030 : TTATAAC-GAT-CATAGAATT------T-GCGAAAATGC-TGCCTTT-AAA-AGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAAGTTGTTTAT
gi|62032 : TTATAAC-GAC-CATAGAATT------T-ATGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAACTTGCCTGT
gi|62033 : TTATAAC-GGC-CATAGAATT------T-ACGAA--TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62034 : TCATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-GGACCTT-AAG-CATG---ACTGTT-G-AAACCCCTG-CAAC-AAC-ACTTGTTTGT
gi|62035 : TTGTAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CATG---AATGTT-G-AAACCTCTG-CAAC-AACAACTTGTTTG
gi|62036 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CTTG---ACTGGT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62037 : TTGTAAC-GAC-CATAGAATG------T-GCAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCCGTG-CAAC-AACAGCTTGTTTGT
gi|62038 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-CGTT---ACTGTTAG-AAACCCTT--CAAC-ATCAACTTGTTTGT
gi|62039 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGCCTGCCTTTTAAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62041 : TTATAAC-GAC-CATATAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTTTT-G-AGACCCCTG-CAAC-AACAACTTGTCTGT
gi|62042 : TTGTAAC-GAC-CGTAGAATT------T-GCAAAA-AGC-TGCCTTT-GAA-CGTG---ACTGTT-G-AAACCCCTG-CATC-AACAACTTGTTTGT
gi|62044 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-CGC-TGCCTTA-CAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-AACAACTTGTTTGT
gi|62045 : TTATAAC-GGC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-GAACCCCTG-CAAC-AATAACTTGTTT
gi|62046 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCTTTT-AAA-CGTG---ACTGTT-C-TAACCCCCG-CAAC-AACAACTTGTTTGT
gi|62048 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TACCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----C-AACAACTTGCTTGT
gi|62050 : TTATAAC-GAC-CATAGAATT------T-GCAAAA-TAC-TTAATTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CACC-ATCAACTT
gi|62055 : TTATAAC-AAC-CATAGCATT------T-GCAAAA-TGC-TGACTGT-AAA-CGTG---ACTG---G-AAACCCTTG-CAAC-AGCAACTTGTTTGT
gi|62057 : TTATAAC-GAC-CATAAAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTAT
gi|62058 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGAG---ATTGTT-G-AAACCCATGTCAA--ATCAATTTATTTGT
gi|62059 : TTATAAC-AAC-CATAGAATT------T-GCAAAA-TGA-TGACTTT-AAG-CGAG---AGTGTT-G-AAACACCTG-CAAC-ATCAATTTGTTTGT
gi|62062 : TTATAAC-GAC-CATAGAATT------T-GCACAA-TGC-TGTTTTT-AAA-CGTG---ACTGTT-G-AAACCTCTG-CAAC-TACAACTTGCTTGT
gi|62065 : TTGTAACCAAT-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTT
gi|62327 : TATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-TGACTTA-AAA-CGAG---ACTGTT-G-AAACCCCTG-TACC-ATCAACTTGTTT
gi|62328 : TATAAC-GAT-CATAGGATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAGC-AACAACTTGTTTGT
gi|62331 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62332 : TGTATC-GAT-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTATTTGT
gi|62333 : TATAAC-AAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----T-AACAACTTGTTTG
gi|62335 : TATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62338 : TATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-AAAC-AACAACGTGTTTGT
gi|62339 : TACAGC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTTTGT
gi|62340 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACGACTTGTTTGT
gi|62376 : ATAAC-GAC-CACAGCATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-C-AAACCCATG-CAAC-ATCAACTTGTTTGT
gi|62377 : ATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62380 : ACAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TTCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62384 : ATAAC-AACTCATAGAATT------T-GCAAAA-TGC-TGATTTT-AAA-CGTG---ACTGTT-C-AAACTCCTA-CAAC-ACCAACTTGCTTGT
gi|62401 : TAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G--AACCCCTG-CAAC-AACAACTTGTCTGT
blockSeqs : AGAATT
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blockSeqCons :
originalCons : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
finalCons : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
Alignments
lowQualScore : 0 0 111111 0 0 0 0 0 000 0 0 0 0
lowQualScore : . . ...... . . . . . ... . . . .
lowQualScore : 4 4 222222 4 4 4 4 8 777 4 4 4 4
consensus : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
Reference ( family-55 ) : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61904 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTCTGT
gi|61906 : TTGTAAC-GGC-CATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG-CAAT-ACCAACTTGTTTGT
gi|61907 : TTATAAC-GAC-CACACAATT------A-GCGAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61908 : TTATAAC-GAC-CATAGAATT------T-GAGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61909 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61911 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61912 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61915 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61916 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61917 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61918 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61919 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61920 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61925 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61926 : TTATAAC-GAC-CCTAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTG---ATTGTT-G-AAATCTCTG-AAAC-ATCAACATGTTT
gi|61927 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61928 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61931 : TTGTAAT-GAC-TATAGAATT------T-GCGAAA-TGC-TGGCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61933 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---GCTGTT-G-AAACCCCTG-CAAC-AACAACGTGTTTGT
gi|61935 : TTATAAC-GAT-CACAGAATT------T-GCGAAA-TGC-TGACTCT-AAA-CGTG---ACTGTT-G-AAACCCCTT-TAAC-AATAACTTGCTTG
gi|61936 : TTTTAAC-GAC-CATAGAATT------TTGCAAAA-TGC-TGCCTTT-AAA-CGCG---ATTGTT-G-AAACCCTTG-CAAC-AACAACTTGTTTGT
gi|61938 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61939 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAAACGTG---ACTGTT-G-AAACCCCTG-TAAC-AACAACTTGTCTGT
gi|61942 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61944 : TTATAAC-GAC-CATAGAATA------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61947 : TTATAAC-AAT-CAGTGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-ATGAACTTGTTTGT
gi|61950 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CGAC-AACAACTTGTCTGT
gi|61951 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-CGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61955 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61958 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAT-AACAACTTGTCTGT
gi|61959 : TTATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTG
gi|61963 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGTTTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61966 : TTATAAC-AAC-CATAAAATT------T-GCGAAA-TGT-TGACTTT-AAA-CGTG---ACTGTT-C-GAACCCATG-TAAC-ATCAACTTGTTTG
gi|61967 : TTGTAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AGACCCCTG-CAAC-AACAACTTGTTTGT
gi|61968 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-GAAAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61971 : TTATAGC-GCC-AATAGAATT------T-GCAAAA-TGC-TGACTTT-AAA-TGTA---AGTGTT-G-AAACCCCTG-CAAC-ATCAACTTGTTTGT
gi|61974 : TTATAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGTCTTT-AAG-CGTG---ACTGTT-G-TAATCCCTG-CAAC-ATCAACTTGTCTG
gi|61978 : TTATAAC-CAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61980 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61981 : TTATAAC-GAC-CATAGTATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61984 : TTATAAC-GAC-CATAGAATT------T-AAGAAA-TGC-TGCCTTT-AAA-CGTG---ATTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61985 : TTACAAC-GAC-CATAGAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-T-AGAACCCTG-CAAC-AACAACTTGTTTGT
gi|61986 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCACTG-CAAC-AACAACTTGTTTGT
gi|61987 : TTTTAAC-GAT-AATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGTA---ACTATT-G-AAATCCCTG-CAAC-ATCAACTTGGTTGT
gi|61988 : TTA-AAC-AAT-CATAGAATT------T-GCTAAA-TGC-TGTCTTT-AAA-CGTG---ACTATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61991 : TTATAAC-GAC-CATAGAATT--------ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|61992 : TTATAAC-AAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGCG---ACTGTT-G-AAACCCCTG-CAAC-AATAACTTGTTTGT
gi|61993 : TTATAAC-GAC-CATAGAATT------T-GCCAAA-TGT-TGCCTTT-AAA-CGTG---AATATT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|61994 : TTATAAC-GAC-CATAGAACT------T-GCGAAA-TTC-TTACTTT-CAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAGCTTGTTTGT
gi|61998 : TTGTAAG-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTAGTTTGT
gi|61999 : TTATAAC-GAC-CATGGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACATGATTGT
gi|62003 : TCATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACCTGTCTG
gi|62004 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACAACTTGTCTGT
gi|62005 : TTATGAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAACAAACAACTTGTCTGT
gi|62009 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCATT-AAA-CGTG---ACCGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62013 : TTTTAAC-GAC-CATAGAACT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62020 : TTATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTCTGT
gi|62021 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGAT-G-AAACTTCTG-CAAC-AACAACTTGTTTGT
gi|62022 : TTATAAT-GAC-CATAGAATT------T-GCAAAA-CAC-TTACTTT-AAA-CGTA---ACTGTT-G-AAACCCCTG-CTAC-AACAACTTGTTTGT
gi|62023 : TTATAAC-GGC-CATAGAATT------T-GTGAAA-TGC-TGACTTT-AAA-AGAG---ACAGTT-G-AAACCCCTG-TAAT-ATCAATTTGTTTGT
gi|62024 : TTATAAC-AAT-CATAGAATT------T-GCGAAA-TAC-TGACTAT-AAA-CGTG---ACTGTG-A-AAATCCCTG-CAAC-AACAACTTGTTTGT
gi|62027 : TTAGAAC-GAT-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-TGTG---ACTTTT-G-AAATCCCTG-CAAC-ATCAACTAGTTTG
gi|62028 : TTATAAC-GAC-CATAGATTT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAATCCCTG----C-AACAACTTGTTTGT
gi|62029 : TTATAAC-GAC-CATAGAATTAGAATTT-GCAAAA-TGC-TGACATT-AAA-CGTGCCAACTGCT-G-AAACCCCTG-CAAC-ATCAATTTGTTTGT
gi|62030 : TTATAAC-GAT-CATAGAATT------T-GCGAAAATGC-TGCCTTT-AAA-AGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAAGTTGTTTAT
gi|62032 : TTATAAC-GAC-CATAGAATT------T-ATGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACTCCTG-CAAC-AACAACTTGCCTGT
gi|62033 : TTATAAC-GGC-CATAGAATT------T-ACGAA--TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62034 : TCATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-GGACCTT-AAG-CATG---ACTGTT-G-AAACCCCTG-CAAC-AAC-ACTTGTTTGT
gi|62035 : TTGTAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CATG---AATGTT-G-AAACCTCTG-CAAC-AACAACTTGTTTG
gi|62036 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CTTG---ACTGGT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62037 : TTGTAAC-GAC-CATAGAATG------T-GCAAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-A-AAACCCGTG-CAAC-AACAGCTTGTTTGT
gi|62038 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-ATA-CGTT---ACTGTTAG-AAACCCTT--CAAC-ATCAACTTGTTTGT
gi|62039 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGCCTGCCTTTTAAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62041 : TTATAAC-GAC-CATATAATT------T-ACAAAA-TGC-TGCCTTT-AAA-CGTG---ACTTTT-G-AGACCCCTG-CAAC-AACAACTTGTCTGT
gi|62042 : TTGTAAC-GAC-CGTAGAATT------T-GCAAAA-AGC-TGCCTTT-GAA-CGTG---ACTGTT-G-AAACCCCTG-CATC-AACAACTTGTTTGT
gi|62044 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-CGC-TGCCTTA-CAA-CATG---ACTGTT-G-AAACCCTTG-TAAC-AACAACTTGTTTGT
gi|62045 : TTATAAC-GGC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-GAACCCCTG-CAAC-AATAACTTGTTT
gi|62046 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGCTTTT-AAA-CGTG---ACTGTT-C-TAACCCCCG-CAAC-AACAACTTGTTTGT
gi|62048 : TTATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TACCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----C-AACAACTTGCTTGT
gi|62050 : TTATAAC-GAC-CATAGAATT------T-GCAAAA-TAC-TTAATTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CACC-ATCAACTT
gi|62055 : TTATAAC-AAC-CATAGCATT------T-GCAAAA-TGC-TGACTGT-AAA-CGTG---ACTG---G-AAACCCTTG-CAAC-AGCAACTTGTTTGT
gi|62057 : TTATAAC-GAC-CATAAAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTAT
gi|62058 : TTATAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TGACTTT-AAA-CGAG---ATTGTT-G-AAACCCATGTCAA--ATCAATTTATTTGT
gi|62059 : TTATAAC-AAC-CATAGAATT------T-GCAAAA-TGA-TGACTTT-AAG-CGAG---AGTGTT-G-AAACACCTG-CAAC-ATCAATTTGTTTGT
gi|62062 : TTATAAC-GAC-CATAGAATT------T-GCACAA-TGC-TGTTTTT-AAA-CGTG---ACTGTT-G-AAACCTCTG-CAAC-TACAACTTGCTTGT
gi|62065 : TTGTAACCAAT-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTT
gi|62327 : TATAAC-GAC-CATAGAATT------T-GCAAAA-TGC-TGACTTA-AAA-CGAG---ACTGTT-G-AAACCCCTG-TACC-ATCAACTTGTTT
gi|62328 : TATAAC-GAT-CATAGGATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAGC-AACAACTTGTTTGT
gi|62331 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62332 : TGTATC-GAT-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTATTTGT
gi|62333 : TATAAC-AAC-CATAGAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG----T-AACAACTTGTTTG
gi|62335 : TATAAC-GAC-CATATAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62338 : TATAAC-GAC-CATATAATT------T-GCGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-AAAC-AACAACGTGTTTGT
gi|62339 : TACAGC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAATTTGTTTGT
gi|62340 : TATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAA-CCCTG-CAAC-AACGACTTGTTTGT
gi|62376 : ATAAC-GAC-CACAGCATT------T-GCAAAA-TGC-TGACTTT-AAA-CGTG---ACTGTT-C-AAACCCATG-CAAC-ATCAACTTGTTTGT
gi|62377 : ATAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTCTGT
gi|62380 : ACAAC-GAC-CATAGAATT------T-GCGAAA-TGC-TTCCTTT-AAA-CGTG---ACTGTT-G-AAACCCCTG-CAAC-AACAACTTGTTTGT
gi|62384 : ATAAC-AACTCATAGAATT------T-GCAAAA-TGC-TGATTTT-AAA-CGTG---ACTGTT-C-AAACTCCTA-CAAC-ACCAACTTGCTTGT
gi|62401 : TAAC-GAC-CATAGAATT------T-ACGAAA-TGC-TGCCTTT-AAA-CGTG---ACTGTT-G--AACCCCTG-CAAC-AACAACTTGTCTGT