lowQualScore : 22222
lowQualScore : 1 1 0 0 0 4444 88888 11
lowQualScore : . . . . . .... ..... ..
lowQualScore : 0 9 9 9 9 0000 66666 33
consensus : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
Reference ( gi|129669 ) : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129668 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129687 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129683 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129682 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129681 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129690 : TCACAGCAGATGTG-ACACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129670 : TCACAGTAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129667 : TCACAGCAGGTGTG-GCGCGATAAAGA-TCCC-TTCCTG-CT----C-----AGAG--GGCAT
gi|129679 : TCACAGCAGGTGTG-GCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129678 : TCACAACAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129677 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129676 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129675 : TCACAGTAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129674 : TCACAGTAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129673 : TCACAGCAGGTGTG-GCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129672 : TCACAGTAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129685 : TCACAGCAAGTGTG-GCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129684 : TCACAACAGGTGTG-GCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129686 : TCACAGCAGGTGTA-GCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129691 : TCACAGCAGGTGTG-GCACGATAAAGA-TCTC-TACCTG-CT----C-----AAAG--
gi|129689 : TCACAGCAGGTGTT-GCATGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129671 : TCACAGTAGGTGTC-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129666 : TCACAGCAGGTGTG-GCACGATAAAGA-TCCC-TCTCTG-CT----CTTGA-AAAA--GGC
gi|129692 : TCACAGTAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CT----C-----
gi|129688 : TCACAGTAGGTGTG-GTTCAATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129652 : TCACAGCAAGTGTT-GCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129664 : TCACAGTAAGTGTT-GCTCGATAAAGA-CCCC-TCCCTG-CT----CTT---AAAGGCGGCAT
gi|129654 : TCACAGTTAGTGTT-GCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129655 : TCACAATAAGTGTT-GCTCGATAAAGA-CTCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129657 : TCACAGTAAGTGTT-GCTCAAGAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129660 : TCACAGTAAG-GTT-CCTCGATAAAGA-TCCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129658 : TCATAATAAGTGTT-GCTCGATAAAGA-CCCT-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129653 : TCACAATAAGTGTT-GCTCGATAAAGA-TCTC-TTCCTG-TT----CTTGA-AAAG--GACAT
gi|129656 : TCACAATAAGT-TGTGCTCGATAAAGA-CTCC-TTCCTG-CT----CTTG--AAAG--GGCAT
gi|129659 : TCACAGTAAGTGTT-GCTCGGTAAAGA-TCTC-TTCCTG-CTATTGA-----AAAT--GGCAT
gi|129662 : TCACAGTAAATGTT-GCTTGATAAAGA-TATA-TTCCTG-CT----CTTGT-AAAG--GGCAT
gi|129661 : TCACAGTAAGTGTT-GCTCGATAA--A-TCTC-TTCCTG-CT----CTTGA-AAAT--GGC
gi|129663 : TCACAGTAAGTGTT-GCTTGATAAAGA-TCTTGTTCCTGACT----CTTTGAAAAG--GGCA
gi|129665 : TCATAGTGAGTGTT-GCTCGATAAAGA-TCAA-TTCCTG-CT----CTTGA-AAAG--
gi|129680 : TCACAGTAAGTGTG-CTTCGATAAATCTTCTC-TCCCTG-CT----C-----
gi|129694 : ACAATAGGTGTG-GCACGATAAAGA-TCCC-TCCCTG-CC----C-----AAA---GGCATttgaaaa
gi|129696 : -GCTCGATAAAGA-TTTC-TTCCTG-CTAGTGA-----AAAG--AGCAT
gi|129697 : taagtgttgctcgataaaCGATAAAGA-TCCC-TTCCTG-CT----CTTG--AAAG--AACAT
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|129695 ): AGTAAGTGTTTGCTCGATAGGAATCTCTTCCTGCCTCTTGCATAAGGCAT
Unaligned ( gi|129693 ): CACAATAATTCTGCTTCGATAAAGACCTTCCTGTTCTTGAAAAGG
Alignments
lowQualScore : 22222
lowQualScore : 1 1 0 0 0 3333 88888 11
lowQualScore : . . . . . .... ..... ..
lowQualScore : 0 6 9 9 9 9999 00000 33
consensus : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
Reference ( family-459 ) : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129652 : TCACAGCAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129653 : TCACAATAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-TT----CTTGA-AAAG--GACAT
gi|129654 : TCACAGTTAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129655 : TCACAATAAGT-GTTGCTCGATAAAGA-CTCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129656 : TCACAATAAGTTGTG-CTCGATAAAGA-CTCC-TTCCTG-CT----CTTG--AAAG--GGCAT
gi|129657 : TCACAGTAAGT-GTTGCTCAAGAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129658 : TCATAATAAGT-GTTGCTCGATAAAGA-CCCT-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129659 : TCACAGTAAGT-GTTGCTCGGTAAAGA-TCTC-TTCCTG-CTATTGA-----AAAT--GGCAT
gi|129660 : TCACAGTAAG--GTTCCTCGATAAAGA-TCCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129661 : TCACAGTAAGT-GTTGCTCGATAA--A-TCTC-TTCCTG-CT----CTTGA-AAAT--GGC
gi|129662 : TCACAGTAAAT-GTTGCTTGATAAAGA-TATA-TTCCTG-CT----CTTGT-AAAG--GGCAT
gi|129663 : TCACAGTAAGT-GTTGCTTGATAAAGA-TCTTGTTCCTGACT----CTTTGAAAAG--GGCA
gi|129664 : TCACAGTAAGT-GTTGCTCGATAAAGA-CCCC-TCCCTG-CT----CTT---AAAGGCGGCAT
gi|129665 : TCATAGTGAGT-GTTGCTCGATAAAGA-TCAA-TTCCTG-CT----CTTGA-AAAG--
gi|129666 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCTCTG-CT----CTTGA-AAAA--GGC
gi|129667 : TCACAGCAGGT-GTGGCGCGATAAAGA-TCCC-TTCCTG-CT----C-----AGAG--GGCAT
gi|129668 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129669 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129670 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129671 : TCACAGTAGGT-GTCGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129672 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129673 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129674 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129675 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129676 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129677 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129678 : TCACAACAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129679 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129680 : TCACAGTAAGT-GTGCTTCGATAAATCTTCTC-TCCCTG-CT----C-----
gi|129681 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCATttgaaaa
gi|129682 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129683 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129684 : TCACAACAGGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129685 : TCACAGCAAGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129686 : TCACAGCAGGT-GTAGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129687 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129688 : TCACAGTAGGT-GTGGTTCAATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129689 : TCACAGCAGGT-GTTGCATGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129690 : TCACAGCAGAT-GTGACACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129691 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TACCTG-CT----C-----AAAG--
gi|129692 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----
gi|129694 : ACAATAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CC----C-----AAA---GGCAT
gi|129696 : GCTCGATAAAGA-TTTC-TTCCTG-CTAGTGA-----AAAG--AGCAT
gi|129697 : taagtgttgctcgataaaCGATAAAGA-TCCC-TTCCTG-CT----CTTG--AAAG--AACAT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|129695 ): AGTAAGTGTTTGCTCGATAGGAATCTCTTCCTGCCTCTTGCATAAGGCAT
Unaligned ( gi|129693 ): CACAATAATTCTGCTTCGATAAAGACCTTCCTGTTCTTGAAAAGG
Alignments
lowQualScore : 22222
lowQualScore : 1 1 0 0 0 3333 88888 11
lowQualScore : . . . . . .... ..... ..
lowQualScore : 0 6 9 9 9 9999 00000 33
consensus : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
Reference ( family-459 ) : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129652 : TCACAGCAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129653 : TCACAATAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-TT----CTTGA-AAAG--GACAT
gi|129654 : TCACAGTTAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129655 : TCACAATAAGT-GTTGCTCGATAAAGA-CTCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129656 : TCACAATAAGTTGTG-CTCGATAAAGA-CTCC-TTCCTG-CT----CTTG--AAAG--GGCAT
gi|129657 : TCACAGTAAGT-GTTGCTCAAGAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129658 : TCATAATAAGT-GTTGCTCGATAAAGA-CCCT-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129659 : TCACAGTAAGT-GTTGCTCGGTAAAGA-TCTC-TTCCTG-CTATTGA-----AAAT--GGCAT
gi|129660 : TCACAGTAAG--GTTCCTCGATAAAGA-TCCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129661 : TCACAGTAAGT-GTTGCTCGATAA--A-TCTC-TTCCTG-CT----CTTGA-AAAT--GGC
gi|129662 : TCACAGTAAAT-GTTGCTTGATAAAGA-TATA-TTCCTG-CT----CTTGT-AAAG--GGCAT
gi|129663 : TCACAGTAAGT-GTTGCTTGATAAAGA-TCTTGTTCCTGACT----CTTTGAAAAG--GGCA
gi|129664 : TCACAGTAAGT-GTTGCTCGATAAAGA-CCCC-TCCCTG-CT----CTT---AAAGGCGGCAT
gi|129665 : TCATAGTGAGT-GTTGCTCGATAAAGA-TCAA-TTCCTG-CT----CTTGA-AAAG--
gi|129666 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCTCTG-CT----CTTGA-AAAA--GGC
gi|129667 : TCACAGCAGGT-GTGGCGCGATAAAGA-TCCC-TTCCTG-CT----C-----AGAG--GGCAT
gi|129668 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129669 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129670 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129671 : TCACAGTAGGT-GTCGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129672 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129673 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129674 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129675 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129676 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129677 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129678 : TCACAACAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129679 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129680 : TCACAGTAAGT-GTGCTTCGATAAATCTTCTC-TCCCTG-CT----C-----
gi|129681 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCATttgaaaa
gi|129682 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129683 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129684 : TCACAACAGGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129685 : TCACAGCAAGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129686 : TCACAGCAGGT-GTAGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129687 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129688 : TCACAGTAGGT-GTGGTTCAATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129689 : TCACAGCAGGT-GTTGCATGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129690 : TCACAGCAGAT-GTGACACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129691 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TACCTG-CT----C-----AAAG--
gi|129692 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----
gi|129694 : ACAATAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CC----C-----AAA---GGCAT
gi|129696 : GCTCGATAAAGA-TTTC-TTCCTG-CTAGTGA-----AAAG--AGCAT
gi|129697 : taagtgttgctcgataaaCGATAAAGA-TCCC-TTCCTG-CT----CTTG--AAAG--AACAT
blockSeqs : T ATTG TTTGA GC
blockSeqs : T AGTG TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTGT .
blockSeqs : T . TTGA .
blockSeqs : T . TTGA .
blockSeqs : T . TTG .
blockSeqs : T . TTG .
blockSeqs : A . TT .
blockSeqs : G . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : T . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : T . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : A . . .
blockSeqs : T . .
blockSeqs : . .
blockSeqCons : *****
originalCons : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
finalCons : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|129695 ): AGTAAGTGTTTGCTCGATAGGAATCTCTTCCTGCCTCTTGCATAAGGCAT
Unaligned ( gi|129693 ): CACAATAATTCTGCTTCGATAAAGACCTTCCTGTTCTTGAAAAGG
Alignments
lowQualScore : 22222
lowQualScore : 1 1 0 0 0 3333 88888 11
lowQualScore : . . . . . .... ..... ..
lowQualScore : 0 6 9 9 9 9999 00000 33
consensus : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
Reference ( family-459 ) : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129652 : TCACAGCAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129653 : TCACAATAAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-TT----CTTGA-AAAG--GACAT
gi|129654 : TCACAGTTAGT-GTTGCTCGATAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129655 : TCACAATAAGT-GTTGCTCGATAAAGA-CTCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129656 : TCACAATAAGTTGTG-CTCGATAAAGA-CTCC-TTCCTG-CT----CTTG--AAAG--GGCAT
gi|129657 : TCACAGTAAGT-GTTGCTCAAGAAAGA-TCTC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129658 : TCATAATAAGT-GTTGCTCGATAAAGA-CCCT-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129659 : TCACAGTAAGT-GTTGCTCGGTAAAGA-TCTC-TTCCTG-CTATTGA-----AAAT--GGCAT
gi|129660 : TCACAGTAAG--GTTCCTCGATAAAGA-TCCC-TTCCTG-CT----CTTGA-AAAG--GGCAT
gi|129661 : TCACAGTAAGT-GTTGCTCGATAA--A-TCTC-TTCCTG-CT----CTTGA-AAAT--GGC
gi|129662 : TCACAGTAAAT-GTTGCTTGATAAAGA-TATA-TTCCTG-CT----CTTGT-AAAG--GGCAT
gi|129663 : TCACAGTAAGT-GTTGCTTGATAAAGA-TCTTGTTCCTGACT----CTTTGAAAAG--GGCA
gi|129664 : TCACAGTAAGT-GTTGCTCGATAAAGA-CCCC-TCCCTG-CT----CTT---AAAGGCGGCAT
gi|129665 : TCATAGTGAGT-GTTGCTCGATAAAGA-TCAA-TTCCTG-CT----CTTGA-AAAG--
gi|129666 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCTCTG-CT----CTTGA-AAAA--GGC
gi|129667 : TCACAGCAGGT-GTGGCGCGATAAAGA-TCCC-TTCCTG-CT----C-----AGAG--GGCAT
gi|129668 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129669 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129670 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129671 : TCACAGTAGGT-GTCGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129672 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129673 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129674 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129675 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129676 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129677 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129678 : TCACAACAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129679 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TCCCTG-CT----C-----AAAG--
gi|129680 : TCACAGTAAGT-GTGCTTCGATAAATCTTCTC-TCCCTG-CT----C-----
gi|129681 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCATttgaaaa
gi|129682 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129683 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129684 : TCACAACAGGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129685 : TCACAGCAAGT-GTGGCACGATAAAGA-CCCC-TCCCTG-CT----C-----AAAG--GCCAT
gi|129686 : TCACAGCAGGT-GTAGCACGATAAAGA-TCCC-TTCCTG-CT----C-----AAAG--
gi|129687 : TCACAGCAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GTCAT
gi|129688 : TCACAGTAGGT-GTGGTTCAATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129689 : TCACAGCAGGT-GTTGCATGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--
gi|129690 : TCACAGCAGAT-GTGACACGATAAAGA-TCCC-TCCCTG-CT----C-----AAAG--GGCAT
gi|129691 : TCACAGCAGGT-GTGGCACGATAAAGA-TCTC-TACCTG-CT----C-----AAAG--
gi|129692 : TCACAGTAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CT----C-----
gi|129694 : ACAATAGGT-GTGGCACGATAAAGA-TCCC-TCCCTG-CC----C-----AAA---GGCAT
gi|129696 : GCTCGATAAAGA-TTTC-TTCCTG-CTAGTGA-----AAAG--AGCAT
gi|129697 : taagtgttgctcgataaaCGATAAAGA-TCCC-TTCCTG-CT----CTTG--AAAG--AACAT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|129695 ): AGTAAGTGTTTGCTCGATAGGAATCTCTTCCTGCCTCTTGCATAAGGCAT
Unaligned ( gi|129693 ): CACAATAATTCTGCTTCGATAAAGACCTTCCTGTTCTTGAAAAGG