lowQualScore : 11
lowQualScore : 6 3 000 33 0 0 00 0 000 0 0 000 0 0 66 0 11111 0 0000 0 0 0 111 0 0 3 0 0
lowQualScore : . . ... .. . . .. . ... . . ... . . .. . ..... . .... . . . ... . . . . .
lowQualScore : 1 2 777 66 4 4 66 8 777 4 4 777 4 4 44 4 00000 4 9999 4 4 4 888 4 4 7 4 4
consensus : TTGACCTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
Reference ( gi|54900 ) : TTAACCTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTA-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54899 : TTGACCTTTCAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----T-AT----GAGTAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54905 : TTGACCTTTGAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---AGGT-TTA-TCCTC-T-CTT-----C-AT----GGGCAACA-T-TTT-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54908 : TTGACCTTTAAT---CC-TT-GACC-TT--G-AAAAT---A-T-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GAGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54911 : TTGATCTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CTC-----C-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54910 : TTGATCTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CTC-----C-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54915 : TTGACCTTTGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54909 : TTGACCTT-GAC---CG-TT-GACA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCT----CTT-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54929 : TTGACCTTTGAC---TC-TT-GACC-TT--G-AAAAT---T-A-ATA---GAGT-TCA-TCCCT-T-CTC-----C-AT----AGGCAAAA-T-TTG-TG---G-AAGATTTA-ATGATCC-T-CTGATGAA
gi|54923 : TTGACATTTGAC---CC-TT-GACC-TT--G-AAAAT---A-A-ATA---GGAT-TCA-TCCCC-T-CTC-----C-AT----AGGCAACA-T-TTT-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|54921 : TTGACCTTTGAT---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---GGCT-TCA-TCCT----CTC-----T-AT----GGGCAACA-T-TAG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|54903 : TTGACCTTTGAC---CC-CT-GACC-TT--C-AAAAT---C-G-ACA---GGGT-TCA-TCCTC-T-TTC-----C-AT----GGGCAACA-T-TTG-TA---G-AA-GTTTG-ATGATTC-T-CTGATGAA
gi|54912 : TTGACCGTTGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---AGGT-ACA-TCCTC-T-CTC-----C-AT----GGGGAACA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54916 : TTGACCTTTGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-AGGATTC-T-CTGATGAA
gi|54934 : TTTACATTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CTC-----C-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54933 : TTTACATTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CTC-----C-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54931 : TTGACATTTGAT---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT--CA-TCCTC-T-TTT-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-TCCTGATGAA
gi|54918 : TTGAACTTTGCC---AC-TA-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|54917 : TTGACCTTTGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-TTGATTC-T-CTGATGAA
gi|54901 : TTGACCTTTGCC---CC-TT-GACC-TT--G-AATAT---C-A-ATA---GAGT-GCA-TTCCC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGATTTG-ATGATTC-T-CAGATGAA
gi|54919 : TTGACCTTTGAC---TC-TC-GACC-TT--G-AAAAT---C-A-ATA---CACA-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTC-ATGATTC-T-CTGATAAA
gi|54928 : TTGACCTTTGAC---CC-CT-GACC-TT--A-AAAAT---C-A-ACA---AAGT-TCA-TCCTC-T-CTC-----C-AT----GCGCAACA---TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGAT
gi|54972 : TTGACTTTTGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---TGGT-T-A-TCCTC-T-CTC-----C-AT----AGGTAACA-T-TTA-TG---G-AAGGTTTA-GTGATCC-T-CTGATGA
gi|54966 : TTGGCCTTTGAT---CA-TT-GACT-TT--A-AAAAT---C-A-GTACTAGGTT-TCA-TACTT-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55241 : TTGACCTTAAAT---AC-TT-GACA-TT--G-AAAAT---C-A-ATA---GCAT-TCA-TTCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|54930 : tgaccTTGACCTTTGAC---TC-TTTGACC-TT--G-AAAAT---T-A-ATA---GGGT-TCA-TCCCT-T-CTC-----C-AT----AGGCAAAATT-TTG-TG---G-AAGATTTA-ATGATCCTT-CTGATGAA
gi|54959 : TTGACTTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---TGGT-TCA-TCCTC-T-CTC-----G-AT----AGGTAACA-T-TTA-TGGAAG-AAGGTTTA-GTGATCC-T-CTCATGAA
gi|54939 : TTGACCTCTGAC---C--TT-GCCA-TT--G-ACTAT---C-A-ATA---GGAT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATGC-T-CTGATGAA
gi|54924 : TTGACCTTTGAC---C--TT-AACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-T-CTC-T-CTC-----CAAT----GGGCAACA-T-TTG-TGC--G-AAGGTTTGAATGACTC-T-CTGATAA
gi|54950 : TTGACCTTTGAT---CA-AT-GACC-TT--A-AAAAT---C-A-GTA---GGTT-TCA-TACTT-T-CTC-----C-AT----GGCCAACA-T-TTG-TA---C-AAGGTTTG-ATGATCC-T-CTGATGGA
gi|54955 : TTGACTTTTGAA---CC-CT-GACC-TT--C-AAAAT---C-A-ATA---GAGT-ACA-TCCTC-T-CTC-----C-AT----GGGAAACA-T-GTG-TT---C-AAAGTTTG-ATGATCC-T-CTGATGAA
gi|54947 : TTGACCTTTGGA---CC-CT-GACC-TTTTG-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CTC-----C-AT----GGGAAACA-T-GTG-TG---C-AAGGTTTG-ATGGTAC-T-CTGATAAA
gi|54958 : TTGACCTTTGAA---CCATT-AACC-TT--G-AAAATAATC-A-ATA---GGGT-ACA-TCCTC-T-CTC-----C-AT----GGAAAA-A-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54953 : TTGACCTTTGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CTC--------T----CGA-AACA-T-GTG-TG---C-AAGGTTTG-ACGATCC-T-CTGATGA
gi|55198 : TGACCTTTAAC---CC-TT-GACC-TT--G-AAAAA---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAAGTTTG-ATGATTT-T-CTGATGAA
gi|55190 : TGACCTT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----AGGCAACA-T-TTG-TG---G-AAGGTGTG-ATGATTC-T-CTGATGAA
gi|55193 : TGACCCT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTT-T-CTC-----C-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55232 : TGACCTT-GAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---CAGT-CCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-ATGATCC-T-CTGATGAA
gi|55199 : TGACCTT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-TTC-----C-AT----GGGCACCA-T-TTG-AG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55195 : TGACCCT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCAATCCTT-T-CTC-----C-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55215 : TGACCTT-GAC---CT-TT-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCT------C-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55194 : TGACCTT-GAC---T--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55206 : TGACCTTTGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATG---GGTT-TCA-TCCTC-T-CTC-----C-CT----GGGC-ACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGGTGAA
gi|55200 : TGACCTT-GAC---CT-TT-GACC-CT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----T-AT----GGGCAACA-A-TTG-TG---G-AAGGACTG-ATGATTC-T-CTGATGAA
gi|55204 : TGACCTT-GAC---CT-TT-GATC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CTC-----T-AT----GGGCAACA-T-ATG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55227 : TGACCTT-GAC---CT-TT-GACC-TT--GGAAAAT---C-A-ATA---GG---TTA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|55228 : TGACCTT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGAT-TCA-TCCTC-TCCTT-----C-AT----GGGCAACA-T-TTG-TG---GAAAGGTTTG-ATGATTC-T-CTGATTAA
gi|55213 : TGACCTT-GAT---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CTC-----A-AT----GGGCAACA-T-TTG-TG---G-AAGGCTTG-ATGATTT-T-CTGATGAA
gi|55219 : TGACCTT-GAC---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TTCTC-T-CTC-----C-AT----GGTCAACA-T-TTG-TG---A-AAGGTTTG-ATAATTC-T-CTGTTGAA
gi|55196 : TGACCTT-GAC---TT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT-----GGCAACA-TGTTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55239 : TGATCTTTGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCG-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TT--TGCCAA-AAGGTCTG-ATGATCC-T-CTG-TGAA
gi|55237 : TGACCTT-GAC---TC-TT-GAAC-TT--G-AAAAT---C-A-GTA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAAAA-T-TTG-TG---G-AAGATTAG-ATGATTC-T-TTGATGA
gi|55216 : TGACCTCC-AC---CT-TT-GACC-TC--G-AAAAT---C-A-ATA---GGGT-TCC-TCCT------C-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTT-T-CTGATGAA
gi|55253 : TGACCTT-GAC---CC-TT-GATC-TT--G-AAAAT---C-A-ACA---ACGT-GTA-TCCTC-T-CTCCTCTCC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55247 : TGACCCT-GAT---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTT-T-TTT-----C-AT----GGGCAACA-T-CTG-TG---G-AAGTTCTG-ATGATTC-T-CTGATGAA
gi|55207 : TGACCTT-GAC---T--TT-GACCCTT--G-AAAAT---C-A-ATA---TGGT-TCA-TTCTC-T-CTC-------AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGAT-C-T-CTGATGAA
gi|55208 : TGACCTT-GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CTC-T-CTC-----A-AT----GGACAATA-T-TTG-TC---G-AAGGTTTC-ATGATTC-T-CTGATGAA
gi|55209 : TGACCTT-GAC---CT-TT-GACC-CT--G-AAAAT---C-A-AT----GGGT-TCA-TTCTC-T-CTC-----T-AT----GG-CAACA-T-TTG-TG---G-AATGTTTG-ATGATTT-T-CTGATAAA
gi|55345 : AACCTT-GAC---CT-TT-GACA-AT--G-AAAAT---C-A-ATT---GGGT-TCA-TCCTC-C-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGTTTTG-ATGATTT-T-CTGATGAA
gi|55346 : gACCTTTGAC---CC-TT-GACC-TT--G-AAAAC---C-A-ATA---AGCT-CCA-CCCTC-T-ATC-----C-AT----GGGCAACA-T-TTG-TG---G-AATGTTTG-ATGATCT-T-CTGATGAA
gi|55364 : gACCCTTGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55363 : ACCCTTGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55362 : ACCCTTGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55205 : CTTTGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CTC-----C-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATCT-T-CTGATGAA
gi|55230 : tgaCCTTGAC---CT-TT-GACC-TT--G-AAAAT---C-G-ATA---GGGT-TCA-ACCTC-T-ATC-----C-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55380 : tggCTGTGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CTC-----C-AT----GGG-AACA-T-GTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55381 : CTTTGAC---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---ACGT-TCA-TCCTCTT-CTC-----C-AT----GGACAACA-T-TT--TG---A-AAGGTTTG-ATGATCC-T-CTGATGA
gi|55378 : CCTTGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT-----GGCAACA-T-TTGTTG---G-AAGGTTT--ATGAT-C-T-CTGATGAA
gi|54943 : CTTTGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGTGCCA-TCCTC-T-CTT-----C-AT----GGGAAACA-T-GTG-TG---T-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55245 : ttgaCTTTGGC---CT-TT-GATC-TT----AAAAT---C-A-ATA---GGAT-TCA-TCTTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATAC-T-CTGATAAA
gi|55191 : tgaCCTTGCC---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT-TCA-TCCTC-T-C-C-----C-AT----GG-CAACA-T-TTG-TG---G-AAGGTTAG-ATGATTC-T-CTGATGAA
gi|55379 : tgaccttaCTTTGAG---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGG---CA-TACCC-T-CTC-----C-AT----GAGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55399 : TTGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATGATTC-T-CTGATGAA
gi|55202 : TTGAC---CT-TT-GACC-AT--G-AAAAT---C-A-ATA---GGGT-TCA-ACCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55400 : tgacTTGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGACAACA-T-CTG-TG---A-AAGGTTTG-ATGATTC-T-CTGAAGAA
gi|55401 : TTGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATTATTC-T-CTGTTGAA
gi|55405 : TTGAC---CT-TT-GAAC-TT--A-AAAAT---C-A-ATA---GGAT-TTA-TCCAC-T-CTC-----C-AT----AGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55408 : TTGAC---CT-TT-GACA-TT--G-AAAAT---CCACATA---GGCT-TCA-TCCTC-T-CTC-----C-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGGTTC-T-CTGAGGAA
gi|55403 : TTGAC---CT-TT-GACC-TT--A-AAAAA---T-A-ATA---TGGT-TCA-TCCAC-T-CTC-----T-AT----GGGCAACA-T-TTG-TC---C-AAGGTTTG-ATGATTC-T-CTGACGAA
gi|55424 : TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-C-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55434 : TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55435 : TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCACCA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55441 : TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55426 : TGAC---C--TT-GACC-TT--T-GAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55448 : TGACTTACT-TT-GACC-TT--GGAAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55442 : TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55454 : TGAC---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TTTTC-T-CTC-----C-AT----GGGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55469 : TGAC---CT-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATG
gi|55463 : TGAC---C--TT-GACC-TT--A-AAAAC---C-A-ATA---GGGT-TCA-TCCTT-T-CTC-----C-ATATATGGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55467 : TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-GCCT----CTC-----C-AT----GTGCAACA-T-TTA-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55449 : TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCC---T-CTC-----C-AT----GGGCAACA-T-ATG-T----G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55470 : TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AG----GGACAACA-T-T---TG---G-AAGGTTTT-ATGATTC-T-CTGATGAA
gi|55443 : TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA----TC-----C-TT----GGACAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55234 : GAC---CT-TT-GAGA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CTC-----C-AT----GAGCAATA-T-TTG-TG---G-AAAGTTTG-ATGATTC-T-CTGATGAA
gi|55522 : tgacctaGAC---CT-TT-GACC-TT--G-AAAAT---C-A-AAA---GGGT-TTA-CCCT----CTC-----C-AT----GGATAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55521 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-T---TCCCC-T-CTC-----T-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGTTTC-T-TTGGTGAA
gi|55397 : ---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGCTTC-T-CTAATCAA
gi|55553 : ttca-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55201 : -TT-GACC-TT--G-AAAAT---C-A-ATT---GGGT-TCA-TTCTC-T-CTC-----C-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55572 : tgaccgtgaatttgtT-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CTC-----C-AT----GGGCAACA-T-TTG-TG---G-AGAGTTTG-ATTATTC-T-CTGATGAA
Alignments
lowQualScore : 44444 000 33 0 0 00 0 000 0 0 000 0 0 0 0 11111 0 0000 0 0 0 111 0 0 0 0
lowQualScore : ..... ... .. . . .. . ... . . ... . . . . ..... . .... . . . ... . . . .
lowQualScore : 33333 777 44 4 4 66 8 777 4 4 777 4 4 4 4 00000 4 8888 4 4 4 888 4 4 4 4
consensus : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
Reference ( family-28 ) : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54899 : TTGACCTT----TCAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GAGTAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54900 : TTAACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTA-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54901 : TTGACCTT----TGCC---CC-TT-GACC-TT--G-AATAT---C-A-ATA---GAGT-GCA-TTCCC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGATTTG-ATGATTC-T-CAGATGAA
gi|54903 : TTGACCTT----TGAC---CC-CT-GACC-TT--C-AAAAT---C-G-ACA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCAACA-T-TTG-TA---G-AA-GTTTG-ATGATTC-T-CTGATGAA
gi|54905 : TTGACCTT----TGAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---AGGT-TTA-TCCTC-T-CT-----TC-AT----GGGCAACA-T-TTT-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54908 : TTGACCTT----TAAT---CC-TT-GACC-TT--G-AAAAT---A-T-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54909 : TTGACCTT-----GAC---CG-TT-GACA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-T-------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54910 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54911 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54912 : TTGACCGT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---AGGT-ACA-TCCTC-T-CT-----CC-AT----GGGGAACA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54915 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54916 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-AGGATTC-T-CTGATGAA
gi|54917 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-TTGATTC-T-CTGATGAA
gi|54918 : TTGAACTT----TGCC---AC-TA-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|54919 : TTGACCTT----TGAC---TC-TC-GACC-TT--G-AAAAT---C-A-ATA---CACA-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTC-ATGATTC-T-CTGATAAA
gi|54921 : TTGACCTT----TGAT---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---GGCT-TCA-TCCTC-T-CT--------AT----GGGCAACA-T-TAG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|54923 : TTGACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---A-A-ATA---GGAT-TCA-TCCCC-T-CT-----CC-AT----AGGCAACA-T-TTT-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|54924 : TTGACCTT----TGAC---C--TT-AACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-T-CTC-T-CT-----CCAAT----GGGCAACA-T-TTG-TGC--G-AAGGTTTGAATGACTC-T-CTGATAA
gi|54928 : TTGACCTT----TGAC---CC-CT-GACC-TT--A-AAAAT---C-A-ACA---AAGT-TCA-TCCTC-T-CT-----CC-AT----GCGCAACA---TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGAT
gi|54929 : TTGACCTT----TGAC---TC-TT-GACC-TT--G-AAAAT---T-A-ATA---GAGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAA-T-TTG-TG---G-AAGATTTA-ATGATCC-T-CTGATGAA
gi|54930 : TTGACCTT----TGAC---TC-TTTGACC-TT--G-AAAAT---T-A-ATA---GGGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAATT-TTG-TG---G-AAGATTTA-ATGATCCTT-CTGATGAA
gi|54931 : TTGACATT----TGAT---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT--CA-TCCTC-T-TT-----TC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-TCCTGATGAA
gi|54933 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54934 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54939 : TTGACCTC----TGAC---C--TT-GCCA-TT--G-ACTAT---C-A-ATA---GGAT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATGC-T-CTGATGAA
gi|54943 : TTGAC-TT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGTGCCA-TCCTC-T-CT-----TC-AT----GGGAAACA-T-GTG-TG---T-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54947 : TTGACCTT----TGGA---CC-CT-GACC-TTTTG-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TG---C-AAGGTTTG-ATGGTAC-T-CTGATAAA
gi|54950 : TTGACCTT----TGAT---CA-AT-GACC-TT--A-AAAAT---C-A-GTA---GGTT-TCA-TACTT-T-CT-----CC-AT----GGCCAACA-T-TTG-TA---C-AAGGTTTG-ATGATCC-T-CTGATGGA
gi|54953 : TTGACCTT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----C---T----CGA-AACA-T-GTG-TG---C-AAGGTTTG-ACGATCC-T-CTGATGA
gi|54955 : TTGACTTT----TGAA---CC-CT-GACC-TT--C-AAAAT---C-A-ATA---GAGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TT---C-AAAGTTTG-ATGATCC-T-CTGATGAA
gi|54958 : TTGACCTT----TGAA---CCATT-AACC-TT--G-AAAATAATC-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGA-AAAA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54959 : TTGACTTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---TGGT-TCA-TCCTC-T-CT-----CG-AT----AGGTAACA-T-TTA-TGGAAG-AAGGTTTA-GTGATCC-T-CTCATGAA
gi|54966 : TTGGCCTT----TGAT---CA-TT-GACT-TT--A-AAAAT---C-A-GTACTAGGTT-TCA-TACTT-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54972 : TTGACTTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---TGGT-T-A-TCCTC-T-CT-----CC-AT----AGGTAACA-T-TTA-TG---G-AAGGTTTA-GTGATCC-T-CTGATGA
gi|55190 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTGTG-ATGATTC-T-CTGATGAA
gi|55191 : TGACCTTACCTTGCC---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT-TCA-TCCTC-T-C------CC-AT----GG-CAACA-T-TTG-TG---G-AAGGTTAG-ATGATTC-T-CTGATGAA
gi|55193 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55194 : TGACCTT-----GAC---T--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55195 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCAATCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55196 : TGACCTT-----GAC---TT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-TGTTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55198 : TGACCTT----TAAC---CC-TT-GACC-TT--G-AAAAA---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAAGTTTG-ATGATTT-T-CTGATGAA
gi|55199 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCACCA-T-TTG-AG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55200 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GGGCAACA-A-TTG-TG---G-AAGGACTG-ATGATTC-T-CTGATGAA
gi|55201 : -TT-GACC-TT--G-AAAAT---C-A-ATT---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55202 : tgaccgtgaatttgtTGAC--T----TGAC---CT-TT-GACC-AT--G-AAAAT---C-A-ATA---GGGT-TCA-ACCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55204 : TGACCTT-----GAC---CT-TT-GATC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-ATG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55205 : TGAC-TT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATCT-T-CTGATGAA
gi|55206 : TGACCTT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATG---GGTT-TCA-TCCTC-T-CT-----CC-CT----GGGC-ACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGGTGAA
gi|55207 : TGACCTT-----GAC---T--TT-GACCCTT--G-AAAAT---C-A-ATA---TGGT-TCA-TTCTC-T-CT-----C--AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGA-TC-T-CTGATGAA
gi|55208 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CTC-T-CT-----CA-AT----GGACAATA-T-TTG-TC---G-AAGGTTTC-ATGATTC-T-CTGATGAA
gi|55209 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-AT----GGGT-TCA-TTCTC-T-CT-----CT-AT----GG-CAACA-T-TTG-TG---G-AATGTTTG-ATGATTT-T-CTGATAAA
gi|55213 : TGACCTT-----GAT---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CA-AT----GGGCAACA-T-TTG-TG---G-AAGGCTTG-ATGATTT-T-CTGATGAA
gi|55215 : TGACCTT-----GAC---CT-TT-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-----------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55216 : TGACCTC----C-AC---CT-TT-GACC-TC--G-AAAAT---C-A-ATA---GGGT-TC----CTC---CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTT-T-CTGATGAA
gi|55219 : TGACCTT-----GAC---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGTCAACA-T-TTG-TG---A-AAGGTTTG-ATAATTC-T-CTGTTGAA
gi|55227 : TGACCTT-----GAC---CT-TT-GACC-TT--GGAAAAT---C-A-ATA---GG---TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|55228 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGAT-TCA-TCCTC-TCCT-----TC-AT----GGGCAACA-T-TTG-TG---GAAAGGTTTG-ATGATTC-T-CTGATTAA
gi|55230 : TGGCCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-G-ATA---GGGT-TCA-ACCTC-T-AT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55232 : TGACCTT-----GAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---CAGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-ATGATCC-T-CTGATGAA
gi|55234 : TGACCTA-----GAC---CT-TT-GAGA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAAGTTTG-ATGATTC-T-CTGATGAA
gi|55237 : TGACCTT-----GAC---TC-TT-GAAC-TT--G-AAAAT---C-A-GTA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAAAA-T-TTG-TG---G-AAGATTAG-ATGATTC-T-TTGATGA
gi|55239 : TGATCTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCG-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TT--TGCCAA-AAGGTCTG-ATGATCC-T-CTG-TGAA
gi|55241 : TTGACCTT----AAAT---AC-TT-GACA-TT--G-AAAAT---C-A-ATA---GCAT-TCA-TTCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|55245 : tgaccTGAC-TT----TGGC---CT-TT-GATC-TT----AAAAT---C-A-ATA---GGAT-TCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATAC-T-CTGATAAA
gi|55247 : TGACCCT-----GAT---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTT-T-TT-----TC-AT----GGGCAACA-T-CTG-TG---G-AAGTTCTG-ATGATTC-T-CTGATGAA
gi|55253 : TGACCTT-----GAC---CC-TT-GATC-TT--G-AAAAT---C-A-ACA---ACGT-GTA-TCCTC-T-CTCCTCTCC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55345 : GAACCT----TGAC---CT-TT-GACA-AT--G-AAAAT---C-A-ATT---GGGT-TCA-TCCTC-C-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGTTTTG-ATGATTT-T-CTGATGAA
gi|55346 : GACCTT----TGAC---CC-TT-GACC-TT--G-AAAAC---C-A-ATA---AGCT-CCA-CCCTC-T-AT-----CC-AT----GGGCAACA-T-TTG-TG---G-AATGTTTG-ATGATCT-T-CTGATGAA
gi|55362 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55363 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55364 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55378 : CCT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-T-TTGTTG---G-AAGGTTT--ATGA-TC-T-CTGATGAA
gi|55379 : CTT----TGAG---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGG---CA-TACCC-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55380 : CTG----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-GTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55381 : CTT----TGAC---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---ACGT-TCA-TCCTCTT-CT-----CC-AT----GGACAACA-T-TT--TG---A-AAGGTTTG-ATGATCC-T-CTGATGA
gi|55397 : ---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGCTTC-T-CTAATCAA
gi|55399 : ttcaT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATGATTC-T-CTGATGAA
gi|55400 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-CTG-TG---A-AAGGTTTG-ATGATTC-T-CTGAAGAA
gi|55401 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATTATTC-T-CTGTTGAA
gi|55403 : T----TGAC---CT-TT-GACC-TT--A-AAAAA---T-A-ATA---TGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-TTG-TC---C-AAGGTTTG-ATGATTC-T-CTGACGAA
gi|55405 : T----TGAC---CT-TT-GAAC-TT--A-AAAAT---C-A-ATA---GGAT-TTA-TCCAC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55408 : T----TGAC---CT-TT-GACA-TT--G-AAAAT---CCACATA---GGCT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGGTTC-T-CTGAGGAA
gi|55424 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-C-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55426 : ----TGAC---C--TT-GACC-TT--T-GAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55434 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55435 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCACCA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55441 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55442 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55443 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-TT----GGACAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55448 : ----TGACTTACT-TT-GACC-TT--GGAAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55449 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CCC-T-CT-----CC-AT----GGGCAACA-T-ATG-T----G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55454 : ----TGAC---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TTTTC-T-CT-----CC-AT----GGGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55463 : ----TGAC---C--TT-GACC-TT--A-AAAAC---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-ATATATGGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55467 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-GCCTC-T-C-------C-AT----GTGCAACA-T-TTA-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55469 : ----TGAC---CT-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATG
gi|55470 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AG----GGACAACA-T-T---TG---G-AAGGTTTT-ATGATTC-T-CTGATGAA
gi|55521 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-T---TCCCC-T-CT-----CT-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGTTTC-T-TTGGTGAA
gi|55522 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-AAA---GGGT-TTA-CCCTC-T-C-------C-AT----GGATAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55553 : -TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55572 : T-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AGAGTTTG-ATTATTC-T-CTGATGAA
Alignments
lowQualScore : 44444 000 33 0 0 00 0 000 0 0 000 0 0 0 0 11111 0 0000 0 0 0 111 0 0 0 0
lowQualScore : ..... ... .. . . .. . ... . . ... . . . . ..... . .... . . . ... . . . .
lowQualScore : 33333 777 44 4 4 66 8 777 4 4 777 4 4 4 4 00000 4 8888 4 4 4 888 4 4 4 4
consensus : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
Reference ( family-28 ) : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54899 : TTGACCTT----TCAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GAGTAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54900 : TTAACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTA-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54901 : TTGACCTT----TGCC---CC-TT-GACC-TT--G-AATAT---C-A-ATA---GAGT-GCA-TTCCC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGATTTG-ATGATTC-T-CAGATGAA
gi|54903 : TTGACCTT----TGAC---CC-CT-GACC-TT--C-AAAAT---C-G-ACA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCAACA-T-TTG-TA---G-AA-GTTTG-ATGATTC-T-CTGATGAA
gi|54905 : TTGACCTT----TGAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---AGGT-TTA-TCCTC-T-CT-----TC-AT----GGGCAACA-T-TTT-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54908 : TTGACCTT----TAAT---CC-TT-GACC-TT--G-AAAAT---A-T-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54909 : TTGACCTT-----GAC---CG-TT-GACA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-T-------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54910 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54911 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54912 : TTGACCGT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---AGGT-ACA-TCCTC-T-CT-----CC-AT----GGGGAACA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54915 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54916 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-AGGATTC-T-CTGATGAA
gi|54917 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-TTGATTC-T-CTGATGAA
gi|54918 : TTGAACTT----TGCC---AC-TA-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|54919 : TTGACCTT----TGAC---TC-TC-GACC-TT--G-AAAAT---C-A-ATA---CACA-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTC-ATGATTC-T-CTGATAAA
gi|54921 : TTGACCTT----TGAT---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---GGCT-TCA-TCCTC-T-CT--------AT----GGGCAACA-T-TAG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|54923 : TTGACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---A-A-ATA---GGAT-TCA-TCCCC-T-CT-----CC-AT----AGGCAACA-T-TTT-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|54924 : TTGACCTT----TGAC---C--TT-AACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-T-CTC-T-CT-----CCAAT----GGGCAACA-T-TTG-TGC--G-AAGGTTTGAATGACTC-T-CTGATAA
gi|54928 : TTGACCTT----TGAC---CC-CT-GACC-TT--A-AAAAT---C-A-ACA---AAGT-TCA-TCCTC-T-CT-----CC-AT----GCGCAACA---TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGAT
gi|54929 : TTGACCTT----TGAC---TC-TT-GACC-TT--G-AAAAT---T-A-ATA---GAGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAA-T-TTG-TG---G-AAGATTTA-ATGATCC-T-CTGATGAA
gi|54930 : TTGACCTT----TGAC---TC-TTTGACC-TT--G-AAAAT---T-A-ATA---GGGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAATT-TTG-TG---G-AAGATTTA-ATGATCCTT-CTGATGAA
gi|54931 : TTGACATT----TGAT---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT--CA-TCCTC-T-TT-----TC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-TCCTGATGAA
gi|54933 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54934 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54939 : TTGACCTC----TGAC---C--TT-GCCA-TT--G-ACTAT---C-A-ATA---GGAT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATGC-T-CTGATGAA
gi|54943 : TTGAC-TT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGTGCCA-TCCTC-T-CT-----TC-AT----GGGAAACA-T-GTG-TG---T-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54947 : TTGACCTT----TGGA---CC-CT-GACC-TTTTG-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TG---C-AAGGTTTG-ATGGTAC-T-CTGATAAA
gi|54950 : TTGACCTT----TGAT---CA-AT-GACC-TT--A-AAAAT---C-A-GTA---GGTT-TCA-TACTT-T-CT-----CC-AT----GGCCAACA-T-TTG-TA---C-AAGGTTTG-ATGATCC-T-CTGATGGA
gi|54953 : TTGACCTT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----C---T----CGA-AACA-T-GTG-TG---C-AAGGTTTG-ACGATCC-T-CTGATGA
gi|54955 : TTGACTTT----TGAA---CC-CT-GACC-TT--C-AAAAT---C-A-ATA---GAGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TT---C-AAAGTTTG-ATGATCC-T-CTGATGAA
gi|54958 : TTGACCTT----TGAA---CCATT-AACC-TT--G-AAAATAATC-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGA-AAAA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54959 : TTGACTTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---TGGT-TCA-TCCTC-T-CT-----CG-AT----AGGTAACA-T-TTA-TGGAAG-AAGGTTTA-GTGATCC-T-CTCATGAA
gi|54966 : TTGGCCTT----TGAT---CA-TT-GACT-TT--A-AAAAT---C-A-GTACTAGGTT-TCA-TACTT-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54972 : TTGACTTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---TGGT-T-A-TCCTC-T-CT-----CC-AT----AGGTAACA-T-TTA-TG---G-AAGGTTTA-GTGATCC-T-CTGATGA
gi|55190 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTGTG-ATGATTC-T-CTGATGAA
gi|55191 : TGACCTTACCTTGCC---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT-TCA-TCCTC-T-C------CC-AT----GG-CAACA-T-TTG-TG---G-AAGGTTAG-ATGATTC-T-CTGATGAA
gi|55193 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55194 : TGACCTT-----GAC---T--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55195 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCAATCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55196 : TGACCTT-----GAC---TT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-TGTTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55198 : TGACCTT----TAAC---CC-TT-GACC-TT--G-AAAAA---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAAGTTTG-ATGATTT-T-CTGATGAA
gi|55199 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCACCA-T-TTG-AG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55200 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GGGCAACA-A-TTG-TG---G-AAGGACTG-ATGATTC-T-CTGATGAA
gi|55201 : -TT-GACC-TT--G-AAAAT---C-A-ATT---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55202 : tgaccgtgaatttgtTGAC--T----TGAC---CT-TT-GACC-AT--G-AAAAT---C-A-ATA---GGGT-TCA-ACCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55204 : TGACCTT-----GAC---CT-TT-GATC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-ATG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55205 : TGAC-TT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATCT-T-CTGATGAA
gi|55206 : TGACCTT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATG---GGTT-TCA-TCCTC-T-CT-----CC-CT----GGGC-ACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGGTGAA
gi|55207 : TGACCTT-----GAC---T--TT-GACCCTT--G-AAAAT---C-A-ATA---TGGT-TCA-TTCTC-T-CT-----C--AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGA-TC-T-CTGATGAA
gi|55208 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CTC-T-CT-----CA-AT----GGACAATA-T-TTG-TC---G-AAGGTTTC-ATGATTC-T-CTGATGAA
gi|55209 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-AT----GGGT-TCA-TTCTC-T-CT-----CT-AT----GG-CAACA-T-TTG-TG---G-AATGTTTG-ATGATTT-T-CTGATAAA
gi|55213 : TGACCTT-----GAT---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CA-AT----GGGCAACA-T-TTG-TG---G-AAGGCTTG-ATGATTT-T-CTGATGAA
gi|55215 : TGACCTT-----GAC---CT-TT-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-----------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55216 : TGACCTC----C-AC---CT-TT-GACC-TC--G-AAAAT---C-A-ATA---GGGT-TC----CTC---CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTT-T-CTGATGAA
gi|55219 : TGACCTT-----GAC---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGTCAACA-T-TTG-TG---A-AAGGTTTG-ATAATTC-T-CTGTTGAA
gi|55227 : TGACCTT-----GAC---CT-TT-GACC-TT--GGAAAAT---C-A-ATA---GG---TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|55228 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGAT-TCA-TCCTC-TCCT-----TC-AT----GGGCAACA-T-TTG-TG---GAAAGGTTTG-ATGATTC-T-CTGATTAA
gi|55230 : TGGCCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-G-ATA---GGGT-TCA-ACCTC-T-AT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55232 : TGACCTT-----GAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---CAGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-ATGATCC-T-CTGATGAA
gi|55234 : TGACCTA-----GAC---CT-TT-GAGA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAAGTTTG-ATGATTC-T-CTGATGAA
gi|55237 : TGACCTT-----GAC---TC-TT-GAAC-TT--G-AAAAT---C-A-GTA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAAAA-T-TTG-TG---G-AAGATTAG-ATGATTC-T-TTGATGA
gi|55239 : TGATCTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCG-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TT--TGCCAA-AAGGTCTG-ATGATCC-T-CTG-TGAA
gi|55241 : TTGACCTT----AAAT---AC-TT-GACA-TT--G-AAAAT---C-A-ATA---GCAT-TCA-TTCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|55245 : tgaccTGAC-TT----TGGC---CT-TT-GATC-TT----AAAAT---C-A-ATA---GGAT-TCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATAC-T-CTGATAAA
gi|55247 : TGACCCT-----GAT---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTT-T-TT-----TC-AT----GGGCAACA-T-CTG-TG---G-AAGTTCTG-ATGATTC-T-CTGATGAA
gi|55253 : TGACCTT-----GAC---CC-TT-GATC-TT--G-AAAAT---C-A-ACA---ACGT-GTA-TCCTC-T-CTCCTCTCC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55345 : GAACCT----TGAC---CT-TT-GACA-AT--G-AAAAT---C-A-ATT---GGGT-TCA-TCCTC-C-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGTTTTG-ATGATTT-T-CTGATGAA
gi|55346 : GACCTT----TGAC---CC-TT-GACC-TT--G-AAAAC---C-A-ATA---AGCT-CCA-CCCTC-T-AT-----CC-AT----GGGCAACA-T-TTG-TG---G-AATGTTTG-ATGATCT-T-CTGATGAA
gi|55362 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55363 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55364 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55378 : CCT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-T-TTGTTG---G-AAGGTTT--ATGA-TC-T-CTGATGAA
gi|55379 : CTT----TGAG---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGG---CA-TACCC-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55380 : CTG----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-GTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55381 : CTT----TGAC---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---ACGT-TCA-TCCTCTT-CT-----CC-AT----GGACAACA-T-TT--TG---A-AAGGTTTG-ATGATCC-T-CTGATGA
gi|55397 : ---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGCTTC-T-CTAATCAA
gi|55399 : ttcaT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATGATTC-T-CTGATGAA
gi|55400 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-CTG-TG---A-AAGGTTTG-ATGATTC-T-CTGAAGAA
gi|55401 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATTATTC-T-CTGTTGAA
gi|55403 : T----TGAC---CT-TT-GACC-TT--A-AAAAA---T-A-ATA---TGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-TTG-TC---C-AAGGTTTG-ATGATTC-T-CTGACGAA
gi|55405 : T----TGAC---CT-TT-GAAC-TT--A-AAAAT---C-A-ATA---GGAT-TTA-TCCAC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55408 : T----TGAC---CT-TT-GACA-TT--G-AAAAT---CCACATA---GGCT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGGTTC-T-CTGAGGAA
gi|55424 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-C-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55426 : ----TGAC---C--TT-GACC-TT--T-GAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55434 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55435 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCACCA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55441 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55442 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55443 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-TT----GGACAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55448 : ----TGACTTACT-TT-GACC-TT--GGAAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55449 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CCC-T-CT-----CC-AT----GGGCAACA-T-ATG-T----G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55454 : ----TGAC---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TTTTC-T-CT-----CC-AT----GGGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55463 : ----TGAC---C--TT-GACC-TT--A-AAAAC---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-ATATATGGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55467 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-GCCTC-T-C-------C-AT----GTGCAACA-T-TTA-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55469 : ----TGAC---CT-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATG
gi|55470 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AG----GGACAACA-T-T---TG---G-AAGGTTTT-ATGATTC-T-CTGATGAA
gi|55521 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-T---TCCCC-T-CT-----CT-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGTTTC-T-TTGGTGAA
gi|55522 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-AAA---GGGT-TTA-CCCTC-T-C-------C-AT----GGATAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55553 : -TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55572 : T-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AGAGTTTG-ATTATTC-T-CTGATGAA
blockSeqs : ACCTT CA GAA
blockSeqs : T C CCA
blockSeqs : T C C
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T G .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T A .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T A .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : C T .
blockSeqs : T T .
blockSeqs : A T .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T T .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : T C .
blockSeqs : . C .
blockSeqs : . C .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
blockSeqs : . T .
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blockSeqCons :
originalCons : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
finalCons : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
Alignments
lowQualScore : 44444 000 33 0 0 00 0 000 0 0 000 0 0 0 0 11111 0 0000 0 0 0 111 0 0 0 0
lowQualScore : ..... ... .. . . .. . ... . . ... . . . . ..... . .... . . . ... . . . .
lowQualScore : 33333 777 44 4 4 66 8 777 4 4 777 4 4 4 4 00000 4 8888 4 4 4 888 4 4 4 4
consensus : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
Reference ( family-28 ) : TTGACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54899 : TTGACCTT----TCAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GAGTAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54900 : TTAACCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTA-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54901 : TTGACCTT----TGCC---CC-TT-GACC-TT--G-AATAT---C-A-ATA---GAGT-GCA-TTCCC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGATTTG-ATGATTC-T-CAGATGAA
gi|54903 : TTGACCTT----TGAC---CC-CT-GACC-TT--C-AAAAT---C-G-ACA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCAACA-T-TTG-TA---G-AA-GTTTG-ATGATTC-T-CTGATGAA
gi|54905 : TTGACCTT----TGAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---AGGT-TTA-TCCTC-T-CT-----TC-AT----GGGCAACA-T-TTT-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54908 : TTGACCTT----TAAT---CC-TT-GACC-TT--G-AAAAT---A-T-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54909 : TTGACCTT-----GAC---CG-TT-GACA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-T-------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54910 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54911 : TTGATCTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CTA-TCCTC-T-CT-----CC-AT----GGGCAACA-G-TTG-TG---G-AAGGTTTG-ATGATTC-T-GGGATGAA
gi|54912 : TTGACCGT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---AGGT-ACA-TCCTC-T-CT-----CC-AT----GGGGAACA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54915 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|54916 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-AGGATTC-T-CTGATGAA
gi|54917 : TTGACCTT----TGAT---CC-GT-GACC-TA--G-AACAT---C-A-ATA---GGGT-CCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-TTGATTC-T-CTGATGAA
gi|54918 : TTGAACTT----TGCC---AC-TA-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|54919 : TTGACCTT----TGAC---TC-TC-GACC-TT--G-AAAAT---C-A-ATA---CACA-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTC-ATGATTC-T-CTGATAAA
gi|54921 : TTGACCTT----TGAT---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---GGCT-TCA-TCCTC-T-CT--------AT----GGGCAACA-T-TAG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|54923 : TTGACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---A-A-ATA---GGAT-TCA-TCCCC-T-CT-----CC-AT----AGGCAACA-T-TTT-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|54924 : TTGACCTT----TGAC---C--TT-AACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-T-CTC-T-CT-----CCAAT----GGGCAACA-T-TTG-TGC--G-AAGGTTTGAATGACTC-T-CTGATAA
gi|54928 : TTGACCTT----TGAC---CC-CT-GACC-TT--A-AAAAT---C-A-ACA---AAGT-TCA-TCCTC-T-CT-----CC-AT----GCGCAACA---TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGAT
gi|54929 : TTGACCTT----TGAC---TC-TT-GACC-TT--G-AAAAT---T-A-ATA---GAGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAA-T-TTG-TG---G-AAGATTTA-ATGATCC-T-CTGATGAA
gi|54930 : TTGACCTT----TGAC---TC-TTTGACC-TT--G-AAAAT---T-A-ATA---GGGT-TCA-TCCCT-T-CT-----CC-AT----AGGCAAAATT-TTG-TG---G-AAGATTTA-ATGATCCTT-CTGATGAA
gi|54931 : TTGACATT----TGAT---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT--CA-TCCTC-T-TT-----TC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-TCCTGATGAA
gi|54933 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54934 : TTTACATT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-TTG-TG---G-TAGGTTTT-ATGATAC-T-CTGATGAA
gi|54939 : TTGACCTC----TGAC---C--TT-GCCA-TT--G-ACTAT---C-A-ATA---GGAT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATGC-T-CTGATGAA
gi|54943 : TTGAC-TT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGTGCCA-TCCTC-T-CT-----TC-AT----GGGAAACA-T-GTG-TG---T-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54947 : TTGACCTT----TGGA---CC-CT-GACC-TTTTG-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TG---C-AAGGTTTG-ATGGTAC-T-CTGATAAA
gi|54950 : TTGACCTT----TGAT---CA-AT-GACC-TT--A-AAAAT---C-A-GTA---GGTT-TCA-TACTT-T-CT-----CC-AT----GGCCAACA-T-TTG-TA---C-AAGGTTTG-ATGATCC-T-CTGATGGA
gi|54953 : TTGACCTT----TGAA---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----C---T----CGA-AACA-T-GTG-TG---C-AAGGTTTG-ACGATCC-T-CTGATGA
gi|54955 : TTGACTTT----TGAA---CC-CT-GACC-TT--C-AAAAT---C-A-ATA---GAGT-ACA-TCCTC-T-CT-----CC-AT----GGGAAACA-T-GTG-TT---C-AAAGTTTG-ATGATCC-T-CTGATGAA
gi|54958 : TTGACCTT----TGAA---CCATT-AACC-TT--G-AAAATAATC-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGA-AAAA-T-GTG-TG---C-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54959 : TTGACTTT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---TGGT-TCA-TCCTC-T-CT-----CG-AT----AGGTAACA-T-TTA-TGGAAG-AAGGTTTA-GTGATCC-T-CTCATGAA
gi|54966 : TTGGCCTT----TGAT---CA-TT-GACT-TT--A-AAAAT---C-A-GTACTAGGTT-TCA-TACTT-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|54972 : TTGACTTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---TGGT-T-A-TCCTC-T-CT-----CC-AT----AGGTAACA-T-TTA-TG---G-AAGGTTTA-GTGATCC-T-CTGATGA
gi|55190 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTGTG-ATGATTC-T-CTGATGAA
gi|55191 : TGACCTTACCTTGCC---CC-TT-GACC-TT--G-AAA-T---C-A-ATA---GGGT-TCA-TCCTC-T-C------CC-AT----GG-CAACA-T-TTG-TG---G-AAGGTTAG-ATGATTC-T-CTGATGAA
gi|55193 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55194 : TGACCTT-----GAC---T--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55195 : TGACCCT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCAATCCTT-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55196 : TGACCTT-----GAC---TT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-TGTTG-TA---G-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55198 : TGACCTT----TAAC---CC-TT-GACC-TT--G-AAAAA---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAAGTTTG-ATGATTT-T-CTGATGAA
gi|55199 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-TT-----CC-AT----GGGCACCA-T-TTG-AG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55200 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CT-AT----GGGCAACA-A-TTG-TG---G-AAGGACTG-ATGATTC-T-CTGATGAA
gi|55201 : -TT-GACC-TT--G-AAAAT---C-A-ATT---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55202 : tgaccgtgaatttgtTGAC--T----TGAC---CT-TT-GACC-AT--G-AAAAT---C-A-ATA---GGGT-TCA-ACCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55204 : TGACCTT-----GAC---CT-TT-GATC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-ATG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55205 : TGAC-TT----TGAC---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCAC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATCT-T-CTGATGAA
gi|55206 : TGACCTT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATG---GGTT-TCA-TCCTC-T-CT-----CC-CT----GGGC-ACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGGTGAA
gi|55207 : TGACCTT-----GAC---T--TT-GACCCTT--G-AAAAT---C-A-ATA---TGGT-TCA-TTCTC-T-CT-----C--AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGA-TC-T-CTGATGAA
gi|55208 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CTC-T-CT-----CA-AT----GGACAATA-T-TTG-TC---G-AAGGTTTC-ATGATTC-T-CTGATGAA
gi|55209 : TGACCTT-----GAC---CT-TT-GACC-CT--G-AAAAT---C-A-AT----GGGT-TCA-TTCTC-T-CT-----CT-AT----GG-CAACA-T-TTG-TG---G-AATGTTTG-ATGATTT-T-CTGATAAA
gi|55213 : TGACCTT-----GAT---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CA-AT----GGGCAACA-T-TTG-TG---G-AAGGCTTG-ATGATTT-T-CTGATGAA
gi|55215 : TGACCTT-----GAC---CT-TT-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-----------C-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55216 : TGACCTC----C-AC---CT-TT-GACC-TC--G-AAAAT---C-A-ATA---GGGT-TC----CTC---CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTT-T-CTGATGAA
gi|55219 : TGACCTT-----GAC---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TTCTC-T-CT-----CC-AT----GGTCAACA-T-TTG-TG---A-AAGGTTTG-ATAATTC-T-CTGTTGAA
gi|55227 : TGACCTT-----GAC---CT-TT-GACC-TT--GGAAAAT---C-A-ATA---GG---TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTAATGAA
gi|55228 : TGACCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGAT-TCA-TCCTC-TCCT-----TC-AT----GGGCAACA-T-TTG-TG---GAAAGGTTTG-ATGATTC-T-CTGATTAA
gi|55230 : TGGCCTT-----GAC---CT-TT-GACC-TT--G-AAAAT---C-G-ATA---GGGT-TCA-ACCTC-T-AT-----CC-AT----GAGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55232 : TGACCTT-----GAC---CC-TT-CACC-TT--G-AAAAT---C-A-ATA---CAGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTA-ATGATCC-T-CTGATGAA
gi|55234 : TGACCTA-----GAC---CT-TT-GAGA-TT--G-AAAAT---C-A-ATA---GGGT-TCA-CCCTC-T-CT-----CC-AT----GAGCAATA-T-TTG-TG---G-AAAGTTTG-ATGATTC-T-CTGATGAA
gi|55237 : TGACCTT-----GAC---TC-TT-GAAC-TT--G-AAAAT---C-A-GTA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAAAA-T-TTG-TG---G-AAGATTAG-ATGATTC-T-TTGATGA
gi|55239 : TGATCTT----TGAC---CC-TT-GAAC-TT--G-AAAAT---C-A-ATA---GGGT-TCG-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TT--TGCCAA-AAGGTCTG-ATGATCC-T-CTG-TGAA
gi|55241 : TTGACCTT----AAAT---AC-TT-GACA-TT--G-AAAAT---C-A-ATA---GCAT-TCA-TTCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTCTG-ATGATTC-T-CTGATGAA
gi|55245 : tgaccTGAC-TT----TGGC---CT-TT-GATC-TT----AAAAT---C-A-ATA---GGAT-TCA-TCTTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TA---G-AAGGTTTG-ATGATAC-T-CTGATAAA
gi|55247 : TGACCCT-----GAT---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTT-T-TT-----TC-AT----GGGCAACA-T-CTG-TG---G-AAGTTCTG-ATGATTC-T-CTGATGAA
gi|55253 : TGACCTT-----GAC---CC-TT-GATC-TT--G-AAAAT---C-A-ACA---ACGT-GTA-TCCTC-T-CTCCTCTCC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55345 : GAACCT----TGAC---CT-TT-GACA-AT--G-AAAAT---C-A-ATT---GGGT-TCA-TCCTC-C-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGTTTTG-ATGATTT-T-CTGATGAA
gi|55346 : GACCTT----TGAC---CC-TT-GACC-TT--G-AAAAC---C-A-ATA---AGCT-CCA-CCCTC-T-AT-----CC-AT----GGGCAACA-T-TTG-TG---G-AATGTTTG-ATGATCT-T-CTGATGAA
gi|55362 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55363 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55364 : ACCCT----TGCC---CT-CT-GACT-TT--G-AAACT---G-A-ACA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTC-ATGATTT-T-CTGATGAA
gi|55378 : CCT----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT-----GGCAACA-T-TTGTTG---G-AAGGTTT--ATGA-TC-T-CTGATGAA
gi|55379 : CTT----TGAG---CT-TT-GACT-TT--G-AAAAT---C-A-ATA---GGG---CA-TACCC-T-CT-----CC-AT----GAGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55380 : CTG----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-ACA-TCCTC-T-CT-----CC-AT----GGG-AACA-T-GTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55381 : CTT----TGAC---CC-TT-GATC-TT--G-AAAAT---C-A-ATA---ACGT-TCA-TCCTCTT-CT-----CC-AT----GGACAACA-T-TT--TG---A-AAGGTTTG-ATGATCC-T-CTGATGA
gi|55397 : ---CC-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGCTTC-T-CTAATCAA
gi|55399 : ttcaT----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATGATTC-T-CTGATGAA
gi|55400 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-CTG-TG---A-AAGGTTTG-ATGATTC-T-CTGAAGAA
gi|55401 : T----TGAC---CC-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCC-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTGG-ATTATTC-T-CTGTTGAA
gi|55403 : T----TGAC---CT-TT-GACC-TT--A-AAAAA---T-A-ATA---TGGT-TCA-TCCAC-T-CT-----CT-AT----GGGCAACA-T-TTG-TC---C-AAGGTTTG-ATGATTC-T-CTGACGAA
gi|55405 : T----TGAC---CT-TT-GAAC-TT--A-AAAAT---C-A-ATA---GGAT-TTA-TCCAC-T-CT-----CC-AT----AGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATCC-T-CTGATGAA
gi|55408 : T----TGAC---CT-TT-GACA-TT--G-AAAAT---CCACATA---GGCT-TCA-TCCTC-T-CT-----CC-AT----GGACAACA-T-TTG-TG---G-AAGGTTTG-ATGGTTC-T-CTGAGGAA
gi|55424 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-C-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55426 : ----TGAC---C--TT-GACC-TT--T-GAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55434 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-CCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55435 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCACCA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55441 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GAGT-TTA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55442 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55443 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-TT----GGACAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-GTGATGAA
gi|55448 : ----TGACTTACT-TT-GACC-TT--GGAAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55449 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA---CCC-T-CT-----CC-AT----GGGCAACA-T-ATG-T----G-AAGGTTTG-ATGATTC-T-CTGATGA
gi|55454 : ----TGAC---CT-TT-GAAC-TT--G-AAAAT---C-A-ATA---GAGT-TCA-TTTTC-T-CT-----CC-AT----GGGCAATA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55463 : ----TGAC---C--TT-GACC-TT--A-AAAAC---C-A-ATA---GGGT-TCA-TCCTT-T-CT-----CC-ATATATGGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-TTGATGAA
gi|55467 : ----TGAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-GCCTC-T-C-------C-AT----GTGCAACA-T-TTA-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55469 : ----TGAC---CT-CT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TTA-CCCTA-T-C-------C-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATG
gi|55470 : ----TGAC---C--TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AG----GGACAACA-T-T---TG---G-AAGGTTTT-ATGATTC-T-CTGATGAA
gi|55521 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-T---TCCCC-T-CT-----CT-AT----GGGCAACA-T-TTG-TG---A-AAGGTTTG-ATGTTTC-T-TTGGTGAA
gi|55522 : GAC---CT-TT-GACC-TT--G-AAAAT---C-A-AAA---GGGT-TTA-CCCTC-T-C-------C-AT----GGATAACA-T-TTG-TG---A-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55553 : -TT-GACC-TT--G-AAAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AAGGTTTG-ATGATTC-T-CTGATGAA
gi|55572 : T-GACC-TT--G-ACAAT---C-A-ATA---GGGT-TCA-TCCTC-T-CT-----CC-AT----GGGCAACA-T-TTG-TG---G-AGAGTTTG-ATTATTC-T-CTGATGAA