lowQualScore : 1 0 2 0 1 111 55 1 0 0 0 44 000 0 0 0 0 0 0 0 1 1 1 1 0 2 0
lowQualScore : . . . . . ... .. . . . . .. ... . . . . . . . . . . . . . .
lowQualScore : 2 8 2 4 6 777 55 2 8 4 4 44 666 8 4 8 8 8 4 4 6 2 5 2 4 0 4
consensus : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
Reference ( gi|42116 ) : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42117 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42121 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42120 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42119 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42124 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42123 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42122 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42126 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42125 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42134 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42128 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42127 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42136 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42137 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTG-A-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AC-A-C-AGAGGGCGC-TC-ATG
gi|42140 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42139 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42138 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42115 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATG
gi|42114 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42113 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42141 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATGcc
gi|42143 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-ATCA-C-AGAGGGCGC-TC-ATG
gi|42118 : ACA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42150 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42149 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42148 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42147 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42151 : ATA-CAG-AGGGCGC-TGA---A--T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42157 : ATA-CAG-AGGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-CTT-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42129 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42131 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42130 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42164 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-TT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42132 : ATA-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-ATG
gi|42170 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42168 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42135 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C-GTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-A-TT-A-C-AGAGGGCGC-TC-ATG
gi|42171 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGAGGGCGC-TC-ATG
gi|42173 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42172 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42163 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-A
gi|42162 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-Aatg
gi|42177 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATGatg
gi|42176 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42165 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-A-G-G-AT-A-C-AGAGGGCGC-
gi|42142 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42158 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42155 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42154 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42182 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TC-ATG
gi|42146 : ATA-CAG-AG--CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42145 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42144 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42185 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGA-GGCGC-TC-ATG
gi|42152 : ATA-CAG-AGGGCGC-T-CAG-A--T-GA-CCGT-GA-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42212 : ATA-CAG-AGGGCGC-T-C---A--T-G
gi|42186 : aaagggcgctcatgactgtgaacagtctcaaaatgaagATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-AT-T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42156 : ATA-CAA-GAGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA--GCGC-TC-ATG
gi|42187 : ATA-CAG-AGGGCGC-T-C---A-----A-CTG-AGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42188 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42167 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42166 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42190 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-TTC-T-C-AC-A-A-T-G-A-G-AT-ATC-AGA-GGCGC-TC-ATG
gi|42191 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CAGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42183 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-CGAG-T-C-T-C-AT-A-A---G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42181 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TCTATG
gi|42161 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42160 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42133 : ATATCAG-AGG-CGC-T-C---A--T-GA-CCGTGGAGC-AG-T-G-T-CCAC-A-A-T-G-A-G-AT-A-C-AGAGGGCGCTTC-ATG
gi|42184 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC---A-T-A-AGG-AT-A-C-AGAGGGCGC-
gi|42159 : ATA-CAG-AGGGCGC-T-C---AGCT-GA--CGT-GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42189 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C---C-AC-A-AGT-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42192 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A-T-AT---C-A-AGGGCGC-TC-A
gi|42194 : ATA-CAG-AGGGCACTT-C---A--T-G--CCG-GGA-C-AT-T-C-T-C-ACAA-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42180 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42179 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42178 : ATA-CAG-AGGGCGC-T-C---AGCT-GA-C-GTG-A-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42196 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42195 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42193 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGCCGC-TC-A
gi|42174 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-A--A-C-AGAGGGCatg
gi|42197 : ATA-CAG-AG--CGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42198 : ATA-CAG-AGGGCAC-TTC---A--T-G--CCG--GA-C-AT-T-C-T-C-AC-A-AAT-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42175 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG---G-T-C-AC-A-A-A-T-A-G-AT-A-C-AGAGGGCGC-
gi|42169 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C--TGGA-C-AG-T-G-T-C-AC-A-A-T-----G-AT-A-C-AGAGGGC
gi|42153 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG-GGA-C-AG-T-G-T-C-ACTA-A-T-G-A-G-AT-A-C-AAGAGGCGCTTC-ATG
gi|42200 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGTG-A-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-CAAAAGGGCGC-TC-ATG
gi|42199 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42202 : TA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42203 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42208 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42207 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42209 : A-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42205 : A-CAG-AGGCCGC-T-C---AA-T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-T-ACAGAGCGC-TC-ATG
gi|42210 : A-CAG-AGGGCG--T-CTGAA--T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T---A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42204 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42211 : A-CAG-AGG-CGC-T-C---A--T-GA-C-GTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42206 : A-CAG-AGGGCGC-T-CT--A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42212 : AA-AGGGCGC-T-C---A--T-GA-CTGTGAA-C-AG-T-C-T-C-AA-A-A-T-GAA-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42213 : -AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-TTG-A-G-AT-A-C-AGAGGGCGC-
gi|42118 : -AC-A-C-AGAGGGCGC-TC-ATG
gi|42161 : -AT-A-C-AGAGGGCGC-TC-ATGaccgtggacagtgtcacaatgagatacagagggcgct
gi|42160 : -AT-A-C-AGAGGGCGC-TC-ATGaccgtggacattcacaatgagatacagagg
gi|42174 : -AT-A-C-AGAGGGCGC-TC-ATGaccgtggacattcacaatgagatacagagg
gi|42169 : -AT-A-C-AGAGGGCGC-TC-ATGaccgtggacattcacaatgagaacagagggc
Alignments
lowQualScore : 1 0 2 0 1 111 55 1 0 0 0 44 000 0 0 0 0 0 0 0 1 1 1 1 0 2 0
lowQualScore : . . . . . ... .. . . . . .. ... . . . . . . . . . . . . . .
lowQualScore : 2 8 2 4 6 777 55 2 8 4 4 33 555 8 4 8 8 8 4 4 6 2 6 2 4 1 5
consensus : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
Reference ( family-272 ) : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42113 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATG
gi|42114 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42115 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42116 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATGcc
gi|42117 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42118 : ACA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42119 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42120 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42121 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42122 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42123 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42124 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42125 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42126 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42127 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42128 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42129 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42130 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42131 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42132 : ATA-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-ATG
gi|42133 : ATATCAG-AGG-CGC-T-C---A--T-GA-CCGTGGAGC-AG-T-G-T-CCAC-A-A-T-G-A-G-AT-A-C-AGAGGGCGCTTC-ATG
gi|42134 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42135 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C-GTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-A-TT-A-C-AGAGGGCGC-TC-ATG
gi|42136 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42137 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTG-A-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AC-A-C-AGAGGGCGC-TC-ATG
gi|42138 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42139 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42140 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42141 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42142 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42143 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-ATCA-C-AGAGGGCGC-TC-ATG
gi|42144 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42145 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42146 : ATA-CAG-AG--CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42147 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42148 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42149 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42150 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42151 : ATA-CAG-AGGGCGC-TGA---A--T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42152 : ATA-CAG-AGGGCGC-T-CAG-A--T-GA-CCGT-GA-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42153 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG-GGA-C-AG-T-G-T-C-ACTA-A-T-G-A-G-AT-A-C-AAGAGGCGCTTC-ATG
gi|42154 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42155 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42156 : ATA-CAA-GAGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA--GCGC-TC-ATG
gi|42157 : ATA-CAG-AGGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-CTT-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42158 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42159 : ATA-CAG-AGGGCGC-T-C---AGCT-GA--CGT-GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42160 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42161 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42162 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-A
gi|42163 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-Aatg
gi|42164 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-TT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42165 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-A-G-G-AT-A-C-AGAGGGCGC-
gi|42166 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42167 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42168 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42169 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C--TGGA-C-AG-T-G-T-C-AC-A-A-T-----G-AT-A-C-AGAGGGC
gi|42170 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42171 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGAGGGCGC-TC-ATG
gi|42172 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42173 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42174 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-A--A-C-AGAGGGC
gi|42175 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG---G-T-C-AC-A-A-A-T-A-G-AT-A-C-AGAGGGCGC-
gi|42176 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42177 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42178 : ATA-CAG-AGGGCGC-T-C---AGCT-GA-C-GTG-A-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42179 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42180 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42181 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TCTATG
gi|42182 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TC-ATG
gi|42183 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-CGAG-T-C-T-C-AT-A-A---G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42184 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC---A-T-A-AGG-AT-A-C-AGAGGGCGC-
gi|42185 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGA-GGCGC-TC-ATG
gi|42186 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-AT-T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42187 : ATA-CAG-AGGGCGC-T-C---A-----A-CTG-AGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42188 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42189 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C---C-AC-A-AGT-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42190 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-TTC-T-C-AC-A-A-T-G-A-G-AT-ATC-AGA-GGCGC-TC-ATG
gi|42191 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CAGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42192 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A-T-AT---C-A-AGGGCGC-TC-A
gi|42193 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGCCGC-TC-Aatg
gi|42194 : ATA-CAG-AGGGCACTT-C---A--T-G--CCG-GGA-C-AT-T-C-T-C-ACAA-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42195 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42196 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42197 : ATA-CAG-AG--CGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42198 : ATA-CAG-AGGGCAC-TTC---A--T-G--CCG--GA-C-AT-T-C-T-C-AC-A-AAT-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42199 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42200 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGTG-A-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-CAAAAGGGCGC-TC-ATG
gi|42202 : TA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42203 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42204 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42205 : A-CAG-AGGCCGC-T-C---AA-T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-T-ACAGAGCGC-TC-ATG
gi|42206 : A-CAG-AGGGCGC-T-CT--A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42207 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42208 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42209 : A-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42210 : A-CAG-AGGGCG--T-CTGAA--T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T---A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42211 : A-CAG-AGG-CGC-T-C---A--T-GA-C-GTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42212 : AA-AGGGCGC-T-C---A--T-GA-CTGTGAA-C-AG-T-C-T-C-AA-A-A-T-GAA-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42213 : -AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-TTG-A-G-AT-A-C-AGAGGGCGC-
Alignments
lowQualScore : 1 0 2 0 1 111 55 1 0 0 0 44 000 0 0 0 0 0 0 0 1 1 1 1 0 2 0
lowQualScore : . . . . . ... .. . . . . .. ... . . . . . . . . . . . . . .
lowQualScore : 2 8 2 4 6 777 55 2 8 4 4 33 555 8 4 8 8 8 4 4 6 2 6 2 4 1 5
consensus : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
Reference ( family-272 ) : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42113 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATG
gi|42114 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42115 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42116 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATGcc
gi|42117 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42118 : ACA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42119 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42120 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42121 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42122 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42123 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42124 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42125 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42126 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42127 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42128 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42129 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42130 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42131 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42132 : ATA-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-ATG
gi|42133 : ATATCAG-AGG-CGC-T-C---A--T-GA-CCGTGGAGC-AG-T-G-T-CCAC-A-A-T-G-A-G-AT-A-C-AGAGGGCGCTTC-ATG
gi|42134 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42135 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C-GTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-A-TT-A-C-AGAGGGCGC-TC-ATG
gi|42136 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42137 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTG-A-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AC-A-C-AGAGGGCGC-TC-ATG
gi|42138 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42139 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42140 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42141 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42142 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42143 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-ATCA-C-AGAGGGCGC-TC-ATG
gi|42144 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42145 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42146 : ATA-CAG-AG--CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42147 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42148 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42149 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42150 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42151 : ATA-CAG-AGGGCGC-TGA---A--T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42152 : ATA-CAG-AGGGCGC-T-CAG-A--T-GA-CCGT-GA-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42153 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG-GGA-C-AG-T-G-T-C-ACTA-A-T-G-A-G-AT-A-C-AAGAGGCGCTTC-ATG
gi|42154 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42155 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42156 : ATA-CAA-GAGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA--GCGC-TC-ATG
gi|42157 : ATA-CAG-AGGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-CTT-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42158 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42159 : ATA-CAG-AGGGCGC-T-C---AGCT-GA--CGT-GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42160 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42161 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42162 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-A
gi|42163 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-Aatg
gi|42164 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-TT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42165 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-A-G-G-AT-A-C-AGAGGGCGC-
gi|42166 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42167 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42168 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42169 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C--TGGA-C-AG-T-G-T-C-AC-A-A-T-----G-AT-A-C-AGAGGGC
gi|42170 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42171 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGAGGGCGC-TC-ATG
gi|42172 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42173 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42174 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-A--A-C-AGAGGGC
gi|42175 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG---G-T-C-AC-A-A-A-T-A-G-AT-A-C-AGAGGGCGC-
gi|42176 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42177 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42178 : ATA-CAG-AGGGCGC-T-C---AGCT-GA-C-GTG-A-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42179 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42180 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42181 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TCTATG
gi|42182 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TC-ATG
gi|42183 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-CGAG-T-C-T-C-AT-A-A---G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42184 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC---A-T-A-AGG-AT-A-C-AGAGGGCGC-
gi|42185 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGA-GGCGC-TC-ATG
gi|42186 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-AT-T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42187 : ATA-CAG-AGGGCGC-T-C---A-----A-CTG-AGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42188 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42189 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C---C-AC-A-AGT-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42190 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-TTC-T-C-AC-A-A-T-G-A-G-AT-ATC-AGA-GGCGC-TC-ATG
gi|42191 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CAGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42192 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A-T-AT---C-A-AGGGCGC-TC-A
gi|42193 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGCCGC-TC-Aatg
gi|42194 : ATA-CAG-AGGGCACTT-C---A--T-G--CCG-GGA-C-AT-T-C-T-C-ACAA-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42195 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42196 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42197 : ATA-CAG-AG--CGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42198 : ATA-CAG-AGGGCAC-TTC---A--T-G--CCG--GA-C-AT-T-C-T-C-AC-A-AAT-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42199 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42200 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGTG-A-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-CAAAAGGGCGC-TC-ATG
gi|42202 : TA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42203 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42204 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42205 : A-CAG-AGGCCGC-T-C---AA-T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-T-ACAGAGCGC-TC-ATG
gi|42206 : A-CAG-AGGGCGC-T-CT--A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42207 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42208 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42209 : A-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42210 : A-CAG-AGGGCG--T-CTGAA--T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T---A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42211 : A-CAG-AGG-CGC-T-C---A--T-GA-C-GTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42212 : AA-AGGGCGC-T-C---A--T-GA-CTGTGAA-C-AG-T-C-T-C-AA-A-A-T-GAA-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42213 : -AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-TTG-A-G-AT-A-C-AGAGGGCGC-
blockSeqs : T G G TGA GC T GT T A C T T
blockSeqs : T G T AG GC T GT T A A T T
blockSeqs : T G T T A T G T A A T T
blockSeqs : . G T . A . G G . A . T
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . G . . . . .
blockSeqs : . G . . A . T . . . . .
blockSeqs : . G . . A . T . . . . .
blockSeqs : . G . . A . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . C . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . G . . . . G . . . . .
blockSeqs : . G . . . . T . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . T . . . . .
blockSeqs : . . . . . . G . . . . .
blockSeqs : . . . . . . T . . . . .
blockSeqs : . . . . . . G . . . . .
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blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqCons :
originalCons : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
finalCons : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
Alignments
lowQualScore : 1 0 2 0 1 111 55 1 0 0 0 44 000 0 0 0 0 0 0 0 1 1 1 1 0 2 0
lowQualScore : . . . . . ... .. . . . . .. ... . . . . . . . . . . . . . .
lowQualScore : 2 8 2 4 6 777 55 2 8 4 4 33 555 8 4 8 8 8 4 4 6 2 6 2 4 1 5
consensus : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
Reference ( family-272 ) : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42113 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATG
gi|42114 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42115 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCACTTC-ATGcc
gi|42116 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATGcc
gi|42117 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42118 : ACA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42119 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42120 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42121 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42122 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42123 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42124 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42125 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42126 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42127 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42128 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42129 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42130 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42131 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTG-A-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42132 : ATA-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-ATG
gi|42133 : ATATCAG-AGG-CGC-T-C---A--T-GA-CCGTGGAGC-AG-T-G-T-CCAC-A-A-T-G-A-G-AT-A-C-AGAGGGCGCTTC-ATG
gi|42134 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42135 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C-GTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-A-TT-A-C-AGAGGGCGC-TC-ATG
gi|42136 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42137 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTG-A-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AC-A-C-AGAGGGCGC-TC-ATG
gi|42138 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42139 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42140 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AGTT-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42141 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42142 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-TCC-AC-A-A---G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42143 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-ATCA-C-AGAGGGCGC-TC-ATG
gi|42144 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42145 : ATA-CAG-AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42146 : ATA-CAG-AG--CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42147 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42148 : ATA-CAG-AGGGCGC-T-C---A--T-AAACTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42149 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42150 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42151 : ATA-CAG-AGGGCGC-TGA---A--T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42152 : ATA-CAG-AGGGCGC-T-CAG-A--T-GA-CCGT-GA-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42153 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG-GGA-C-AG-T-G-T-C-ACTA-A-T-G-A-G-AT-A-C-AAGAGGCGCTTC-ATG
gi|42154 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42155 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42156 : ATA-CAA-GAGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA--GCGC-TC-ATG
gi|42157 : ATA-CAG-AGGGCGC-TTC---A--T-GA-CCGTGGA-C-AG-T-CTT-C-A--A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42158 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-G-AC-A-A-T-G-A-GAAT-A-C-AGAGGGCGC-TC-AT
gi|42159 : ATA-CAG-AGGGCGC-T-C---AGCT-GA--CGT-GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42160 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42161 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGG
gi|42162 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-A
gi|42163 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A---AT-A-C-AGAGGGCGC-TC-Aatg
gi|42164 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-TT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42165 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC-A-A-T-A-G-G-AT-A-C-AGAGGGCGC-
gi|42166 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42167 : ATA-CAG-AGGGCGC---C---A--T-GA-CCG--GA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42168 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42169 : ATA-CAG-AGGGCGC-T-C---A--T-GA-C--TGGA-C-AG-T-G-T-C-AC-A-A-T-----G-AT-A-C-AGAGGGC
gi|42170 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42171 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGAGGGCGC-TC-ATG
gi|42172 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42173 : ATA-CAGGAGGGCGC-T-G---AA-T-GA-CCGTGGA-C-A--T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42174 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-T-G-A-G-A--A-C-AGAGGGC
gi|42175 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG---G-T-C-AC-A-A-A-T-A-G-AT-A-C-AGAGGGCGC-
gi|42176 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42177 : ATA-CAG-AGG-CGC-T-G---AA-T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42178 : ATA-CAG-AGGGCGC-T-C---AGCT-GA-C-GTG-A-C-AG-T---T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42179 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42180 : ATATCAG-AGG---C-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-ATG-AT-A-C-AGA-GGCGC-TC-ATG
gi|42181 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TCTATG
gi|42182 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGGCGC-TC-ATG
gi|42183 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CCGT-GA-CGAG-T-C-T-C-AT-A-A---G-A-G-AT-A-C-AGAGGGCGC--C-ATG
gi|42184 : ATA-CAA-AGG-CGC-T-C---A--T-GA-CCGTGGA-C-AG-T-C-T-C-AC---A-T-A-AGG-AT-A-C-AGAGGGCGC-
gi|42185 : ATA-CAG-AGGGCGC-T-G---AA-T-GA-CCGTGGA-C-AG-T-C-T-C-AT-A-A-T-G-A-G-A--A-C-AGA-GGCGC-TC-ATG
gi|42186 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-AT-T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42187 : ATA-CAG-AGGGCGC-T-C---A-----A-CTG-AGA-C-AT-T-C-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42188 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-AA-C-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42189 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CC-TGGA-C-AG-T-C---C-AC-A-AGT-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42190 : ATA-CAG-AGGGCGC-T-C---A--TTGA-CTGTGGA-C-AT-TTC-T-C-AC-A-A-T-G-A-G-AT-ATC-AGA-GGCGC-TC-ATG
gi|42191 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CAGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42192 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CTGTGGA-C-AT-C-C-T-C-AC-A-A-T-G-A-T-AT---C-A-AGGGCGC-TC-A
gi|42193 : ATA-CAG-AGGGCGC-T-C---A--T-AA-CTGTGGA-C-AT-T-C-C-C-AC-A-A-T---A-G-ATAA-C-AGAGGCCGC-TC-Aatg
gi|42194 : ATA-CAG-AGGGCACTT-C---A--T-G--CCG-GGA-C-AT-T-C-T-C-ACAA-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATatg
gi|42195 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42196 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGT-GA-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-C-AAAGGGCGC-TC-ATG
gi|42197 : ATA-CAG-AG--CGC-T-C---A--T-GA-CTGTAGA-C-A--T-C-T-C-A--A-A-T-G-A-G-AT-A-C-AGA-GGCGC-TC-ATG
gi|42198 : ATA-CAG-AGGGCAC-TTC---A--T-G--CCG--GA-C-AT-T-C-T-C-AC-A-AAT-G-A-G-AT-A-C-AGAGGGCGC-TC-AT
gi|42199 : ATA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42200 : ATA-CAG-AGG-CGC-T-C---A--T-GA-CTGTG-A-C-AT-C-C-T-C-AC-A-A-T-G-A-G-A--A-CAAAAGGGCGC-TC-ATG
gi|42202 : TA-CAG-AGGGCGC-T-C---A--T-GA-CC---GA-C-AG-T---T-C-AC-A-A---G-A---AT-A-C-A-AAGGCGC-TC-ATG
gi|42203 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-
gi|42204 : A-CAG-AGGGCGC-T-C---A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42205 : A-CAG-AGGCCGC-T-C---AA-T-GA-CCGTGGA-C-AG-T-G-T-C-AC-A-A-T-G-A-G-AT-A-T-ACAGAGCGC-TC-ATG
gi|42206 : A-CAG-AGGGCGC-T-CT--A--T-GA-CCGTGGA-C-AG-T-G-T-C-AC-ACA-T-G-A-G-AT-ATC-AGAG---GC-TC-ATG
gi|42207 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42208 : A-CAA-AGGGCGC-T-C---A--T-GA-C-GTGAA-C-AG-T-C-T-C-AA-A-A-T-G-A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42209 : A-CAG-AGGGCGC-T-C---A--T-GA--CGTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42210 : A-CAG-AGGGCG--T-CTGAA--T-GA-CTGTGGA-C-AG-T-C-T-C-AT-A-A-T---A-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42211 : A-CAG-AGG-CGC-T-C---A--T-GA-C-GTGGA-C-AT-T-C-T-C-AC-A-A-T-G-A---AT-A-C-AGA-GGCGC-TC-ATG
gi|42212 : AA-AGGGCGC-T-C---A--T-GA-CTGTGAA-C-AG-T-C-T-C-AA-A-A-T-GAA-G-AT-A-C-AGAGGGCGC-TC-ATG
gi|42213 : -AGGGCGC-T-C---AA-T-GA-CCGTGGA-C-A----T-T-C-AC-A-A-TTG-A-G-AT-A-C-AGAGGGCGC-