lowQualScore : 5555555555
lowQualScore : 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 5555555555 11111 111 0 0 0 2222 0 1 00 11 44444444 00 11 0 0
lowQualScore : . . . . . . . . . . . . . . . . .......... ..... ... . . . .... . . .. .. ........ .. .. . .
lowQualScore : 8 4 4 4 4 4 4 4 4 4 4 4 4 4 2 2 7777777777 00000 111 4 4 4 0000 4 2 66 44 77777777 66 11 5 5
consensus : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-GC-G-T-T-GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Reference ( gi|129174 ) : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-GCTG-T-T-ATTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129171 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-T-GGC-CC-T-GCCG-T-T-GTTCA-----G---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129170 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-T-GGC-CC-T-GCCG-T-T-GTTCA-----G---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129173 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-GACG-T-T-GTTCA-----G---C-A-G-T---GG-TG-A--TTT--T------T-A--G--AAG-A-ATTT
gi|129175 : CCA-C-A-T-CA-C-TCACC-T-AAG-T-AA-CCT-T-GGC-CC-T-GATG-T-T-GTTCA-----G---C-A-G-T---GG-TG-G--TTT--T------T-A--A--AAG-A-ATTTT
gi|129200 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGG-CC-T-GCTG-T-C-ATTCA-----G---C-A-T-T---GG-TC-A--TTT--T------G-A--A--AAG-A-TTTTT
gi|129188 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-AGC-CC-TAGC---------TCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129183 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129184 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATATT
gi|129195 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CC-T-G--------ATTCA-----G---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129194 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CC-T-G--------ATTCA-----G---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129178 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GA-TG-A--TTT--T------G-A--A--AAG-A-ATTTT
gi|129192 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCT-T-AGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129191 : CCA-C-A-T-CG-C-TCACC-T-CAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129185 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-A
gi|129204 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-T-GGC-CC-T-G--G-----A-CCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129201 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129182 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129176 : CCA-G-A-T-CA-C-TCACT-T-GAG-T-GG-CCT-T-GGT-CA-T-GCCG-T-T-GTTCA-----G---C-A-G-T---GG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129219 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CC-T-AT--------TTCG-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129208 : CCA-C-A-T-CG-A-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATTTT
gi|129196 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CC-T-G--------ATTCA-----G---CAA-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129172 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-T-GGC-CC-T-GCCG-T-T-GTTCA-----G---C-A-G-T------TG-G--TTT--T------G-ATTA--AAG-A-ATTTT
gi|129211 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-T-GGT-CC-T-G--------GTTCA-----T---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTCT
gi|129202 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGT-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129199 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----A---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129218 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-T-GGC-CC-T-G--G-----A-TCA-----G---C-A-G-T---GG-TG-A--TGT--C------A-A--A--AAG-A-ATTTT
gi|129230 : CCA-CCA-T-AG-C-TCACT-T-GAG-T-GA-CCT-T-GGC-AC-T-GCTG-T-T-GTTCA-----G---C-A-G-TACCGG-TA-A--TTT--T------A-A--A--AAG-AGATTTT
gi|129180 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CT-T-G--------GCTCA-----G---C-A-G-T---TG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129223 : CCA-C-A-T-CG-C-TCACC-T-GAT-A-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129221 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGGGC-CC-A-G--------GCTCA-----G---C-A-G-T---GG-TA-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129220 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-CA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-T--TTT--T------A-A--A--AAG-A-ATTTT
gi|129207 : CCA-C-A-T-CA-C-TCACC-T-TAG-T-GA-CCT-T-GGC-CC-T-G--G-------TCA-----G---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129177 : CCA-C-A-T-TG-C-CCACC-T-GGG-T-GA-TCT-T-GGC-CC-T-GCCG-T-T-GTTCA-----G---C-A-G-T---GG-TG-A--TTTA-T------A-A--A--
gi|129216 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AGA-A-ATTTg
gi|129229 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-GC---------TCA-----G---C-A-G-T---AG-TG-A--TTTAGG------A-A--A--AGA-A-ATTTT
gi|129193 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-C---GG-TA-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129212 : CCA-C-A-T-AG-T-TC-CC-T-GAG-T-GA-CCT-T-GGC-CC-T-GCCGTT-T-GTTCA-----G---C-A-A-T---GG-TG-A--TTT--T------A-A--A--ATG---ATTTT
gi|129215 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GTTCA-----G---C-A-G-T---GA-TG-A--TTT--C--------A--A--AAG-A-ATATT
gi|129186 : CCA-C-A-T-CG-C-TCACT-G-GAG-T-GA-CCT-T-GGC-CC-T-A--------ACTCA-----G---C-A-G-T---GG-TG-A--TTC--T------A-A--A--AGA-A-ATTT
gi|129235 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CAT-G-GGT-CC-T-----------CTCA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129244 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-T-GGC-CA-T-G--------GTTCA-----A---T-A-G-T---GG-TC-A--TTT--C------A-A--A--AAG-A-ATTTT
gi|129233 : CCA-C-A-T-CG-C-TCACC-T-GAG-TTGA-TCT-T-GGC-CC-A-GCT---------CA-----G---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATT
gi|129222 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-TCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTTA-G------A-A--A--AAA-A-ATTT
gi|129238 : CCATC-A-T-CGGC-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-C---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129258 : CCA-C-A-T-TG---TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-GC---------TCA-----G---C-A-G-T---G---G-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129250 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-T-GGTTCC-T-GCT---------CA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTT
gi|129241 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T--GC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AGA-A-ATTTT
gi|129239 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-T-GGC-CC-T-GC---------TCA-----G---C-A-G-T---AG-TG-A--TTT--T------G-T--ACTAAG-A-ATTCT
gi|129227 : CCA-C-A-A-CG-C-TCACC-TTGAG-G-GG-CCT-T-GGG-TC-T-GCTA-T-T-GTTTA-----C---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129256 : CCA-C-A-T-CG-C-TCACCCT-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA---------C-A-G-T---GG-TG-A--TTA--G------A-A--A--AAG-A-ATTTT
gi|129255 : CCA---A-T-CG-C-TCACC-T-GAGAT-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------AGA--A--AAG-A-ATTTT
gi|129260 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GG-CCT-T-GGC-----------------TCA-----G---C-A-G-T---AG-TG-A--TTT--T------A-A--T--AAG-A-ATTTT
gi|129214 : CCA-C-A-T-AG-C-GCACA-T-GAG-T-GA-CTT-T-GGC-AC-T-GCCA-T-T--TTCA-----G---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
gi|129243 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GACCCT-T-GGC-CCAT-G--G-------TCA-----G---C-A-G-T---GG-TG-A--TTT--------------A--AAG-A-ATTTT
gi|129247 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--CAA-A-ATTTT
gi|129245 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---A-C-G-T---GG-AG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129262 : CCA-C-A-T-GG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-AC-T-G--------GTTCA-----A---C-A-G-T---GG-CG-A--CTT--C------A-A--A--ATG-A-ATTTT
gi|129254 : CCA-C-AGT-CG---TCACC-T-GAG-T-GA-CCT-T-TGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129224 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T--GC-CC-T-G--------GCTCA-----G---C-A-G-T----G-TG-A--TTT--A------G-A--A--AAG-A-ATT
gi|129226 : CCA-C-A-T-CA-C-GCACC-T-GAG-T-GA-CCT-T-GGC-CC-TAGC---------TCA-----G---C-A-G-T---GG--G-A--TTT--T------C-A--AT-AAG-A-ATTTT
gi|129252 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-AGG-C---GGCTG-A--TTT--T------AGA--A--AAG-A-
gi|129179 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-T-GGT-CC-T-GCCA-T-T-G-TCAACTGGG---C-A-G-T---TA-CG-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129209 : CCA-C-A-T-CG-C-TCTCC-T-GAG-T-GA-CGT-T-GGC-CC-C-GCCA-T-T-TCACA-----G---C-A-G-T---TG-TG-A--TTT--TTTAATGA-A--A--AGG-A-ATTTT
gi|129187 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-CCT-T-GGT-CA-T-GCTG-C-T-GTTCA-----G---C-T-G-T---TG-TG-A--TTT--TTC----A-A--A--CAA-A-CTTTT
gi|129237 : CCA-C-A-T-CG-C-TCATC-T-GAG-T-GA-CCT-T-GAC-CC-A-G--------GCTCA-----G---C-A-G-T---GG-CG-A--TTC--T------T-A--A--AAT-A-ATTTT
gi|129263 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCTAT-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-AG-A--TTT--T------A-A--A--
gi|129249 : CCA-C-A-T-CG-C-TCAGC-T-GAG-T-GA-CTT-T-GGC-TC-C-GCTG-T-T-GCCGA-----G---T-A-G-T---TT-TG-A--ATT--T------A-A--A--AAT-A-ATTTTg
gi|129225 : CCA-T-A-T-CG-C-TCACC-T-GAG-A-GA-CCT-T-GGT-CC-T-ACTG-T-T-GTTCA-----G---C-A-G-T---TG-AG-A--TTT--T------
gi|129234 : CCA-C-A-T-CG-C-TCACA-T-GAA-T-CA-TCT-T-GGC-CC-T-GTTA-T-T-GTTCA-----GGTAC-A-G-T---GG-T-----TTT--T------T-A--A--AAG-A-TTTTTt
gi|129246 : CCA-C-A-T-CG-C-TCAAC-T-CAG-T-GA-ACT-T-GGC-AC-T-G--------GTTCA-----G---G-A-G-T---GG-TG-A--TTT--C------C-A--A--AAG-A-ATTTT
gi|129197 : CCA-C-A-T-CG-C-TTATC-T-GAG-T-GA-CCT-T---C-CCAT-GCCG-T-T-GTTCA-----G---C-A-G-T---TG-TA-A--TTC--T------T-A--T--CAG-A-ATTTT
gi|129205 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GAC-CC-T-GCAG-T-T-GGGCA-----G---C-A-G-T---TG-AG-A--TTT--T------
gi|129251 : CCA-C-A-T-CA-C-TCTCC-T-GAG-T-GA-CCT-T-GGC-CC-C--CAG-----GCTCA-----G---T-A-T-T---AG-TG-A--TAT--T------A-A--A--AAG-A-ATTTTtatagaatct
gi|129242 : CCA-C-A-T-TG-C-CCTCT-T-CAG-C-GA-C-T-T-GGC-CC-T-GCTT-T-T--TTCA-----G---C-A-G-A---TG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129231 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-T-GGC-CA-T-GATG-C-T-GTTGA-----G---C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129181 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-ACT-T-GGC-CC-T-ACCA-T-T-GCTCA-----G---C-A-GTT---TG-TG-A--TTT--T------
gi|129213 : CCT-C-A-T-CG-T-TCACC-T-GAG-T-GA-ACT-T-GGC-CC-T-ACCA-T-T-GCTCA-----G---C-A-G-T---TG-TG-A--TTT--T------t
gi|129240 : CCA-C-A-T-CG-C-TCGTC-T-GAG-T-GA-TCT-T-GCC-CC-T-G--------GTTCA-----G---C-A-A-T---TT-CGAA--TTT--T------A-A--A--AAG-A-ATTT
gi|129261 : CCA-C-A-T-CG-C-TCACC-C-GAG-T-GA-TCT-T-CGC-CCAT-G---------TTCA-----A---C-A--------G-TG-A--TTT--TA-----A-A--A--AAG-A-ATTTT
gi|129236 : CCAGC-A-T-TG-C-TCAAC-T-GAG-T-GA-CCT-T-GG--CC-T-GC-G-T-T-GTTCA-----G---C-A-G-T---TG-TG-A--TTT--T------
gi|129232 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-T-GGC-CA-T-GATG-TCT-GTTGA-----GA--C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-t
gi|129253 : CCA-C-A-T-TG-C-TCACC-T-GCG-T-AA-T------------T-ACTG-T-T-GTTCA-----G---C-A-G-T---TG-TG-A--TTA--T------T-A--A--AAT-A-ATTTT
gi|129248 : CCA-C-A-G-CA-C-TTACC-T-GAG-T-CT-CAT-T-GGC-AC-T-TCAG-T-T-GTTTA-----G---C-T-G-T---TG-TA-A--TTT--T------C-A--A--AAG-A-ATTCT
gi|129259 : CTA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-T-GAC-CT-T-GACA-T-T-GTTTG-----A---C-A-G-T---TG-CGAA--TTC--T------A-
gi|129257 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-ATT-T-GAC-CC-T-ACC--T-T-GTTCA-----G---T-T-G-T---TG-TG-A--TTT--
gi|129303 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-GGC-CC-T-G--------GCTCA-----G---C-A-G-T---GG-TG-A---TT--T------A-G--A--AAG-A-ATT
gi|129306 : CA-C-A-T-TG-C-TTACC-T-GAG-T-GA-CCT-T-AGC-CC-T-G--G-----AT-CA-----G---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATT
gi|129309 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CC--T-GGC-CC-T-G--------GCTTA-----G---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAGAA-ATTTT
gi|129308 : CA-C-G-T-TG-C-TTACC-T-GAG-T-AA-CCT-T-GAT-AC-T-GTTG-T-T-GTTCT-----G---C-A-A-T---TG-TG-A--TTT--T------G-A--A--ACG-A-ATTT
gi|129305 : CA-C-A-T-TG-T-TCACC-T-GAG-T-GA-TCT-G-GGC-TC-T-GCCG-T-T-GTTTA-----G---C-A-A-T---GG-TG-A--TTT--T------
gi|129304 : CA-C-A-C-CA-C-TCACC---GAA-T-GA-CCT-T-GGC-CC-T-A----T-C-ATTCA-----G---C-A-G-T---TG-TG-A--TTT--C------T-A--T--AAG-A-ATt
gi|129307 : CA-C-A-T-CA-C-TCACA-C-GAG-T-GA-CCC-T-GGC-AC-T-GCCA-T-T-TTTCA-----G---C-A-G-TG--GG-TG-T--TTT--T------T-A--G--AAG-
gi|129315 : A-C-A-T-CG-C-TCACC-T-GAA-T-GG-CCT-T-TGT-CC-T-GCCG-T-T-GTTTA-----G---T-A-G-T---TG-TA-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129317 : A-C-A-T-CA-TGTCACC-T-GAG-T-GT-ACT-T-GGC-CC-T-GCTG-T-T-GTTCA-----G---A-A-G-T---TG-TGAA--TTT--T------
gi|129316 : A-C-A-T-CG-T-TCACT-T-GAA-T-CA-ACT-T-GGC-CC-T-ACCA-T-T-GTTCA-----G---A-T-G-T---TG-CG-A--TTT--T------T-A--A--AAG----TTTT
gi|129323 : -C-A-TGCG-C-TCACC-G-GAG-T-GA-CCT-T-GGC-CC-T-GCCG-T-T-----------------A-G-T---TG-TG-A--CTT--T------T-A--A--AAG-A-ATTTT
gi|129322 : -C-A-T-CG-C-TCATC-T-GAG-T-GG-CCT-T-GGC-CC-T-AACC-T-T-GTTCA-----G---A-A-G-T---TA-TG-A--TTA--T------T-A--A--AAG-A-ATTT
gi|129330 : -TCACC-T-GAG-T-GA-TCT-T-GGC-CT-TGGCTA-T-TGATGC------G---C-A-G-T---CG-TG-ATTTTT--T------A-A--G--AAG-A-ATTTT
gi|129334 : T-T-GGC-CC-T-GCCG-T-T-GTTCA-----G---T-A-G-T---AG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
Alignments
lowQualScore : 444444444
lowQualScore : 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999999999 0000 111 0 0 0 1111 0 1 00 11 44444444 00 11 0 0
lowQualScore : . . . . . . . . . . . . . . . ......... .... ... . . . .... . . .. .. ........ .. .. . .
lowQualScore : 8 4 4 4 4 4 4 4 4 4 4 4 4 4 4 555555555 9999 111 4 4 4 9999 4 2 55 33 55555555 66 00 4 5
consensus : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C--T-T-G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Reference ( family-204 ) : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C-GT-T-G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129170 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-GC-C-GT-T-G----TTCAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129171 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-GC-C-GT-T-G----TTCAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129172 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-GC-C-GT-T-G----TTCAG---C-A-G-T------TG-G--TTT--T------G-ATTA--AAG-A-ATTTT
gi|129173 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-GA-C-GT-T-G----TTCAG---C-A-G-T---GG-TG-A--TTT--T------T-A--G--AAG-A-ATTT
gi|129174 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CTGT-T-A----TTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129175 : CCA-C-A-T-CA-C-TCACC-T-AAG-T-AA-CCT-TGG-CCC-T-GA-T-GT-T-G----TTCAG---C-A-G-T---GG-TG-G--TTT--T------T-A--A--AAG-A-ATTTT
gi|129176 : CCA-G-A-T-CA-C-TCACT-T-GAG-T-GG-CCT-TGG-TCA-T-G--CCGT-T-G----TTCAG---C-A-G-T---GG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129177 : CCA-C-A-T-TG-C-CCACC-T-GGG-T-GA-TCT-TGG-CCC-T-GC-C-GT-T-G----TTCAG---C-A-G-T---GG-TG-A--TTTA-T------A-A--A--
gi|129178 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GA-TG-A--TTT--T------G-A--A--AAG-A-ATTTTg
gi|129179 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-GC-C-AT-T-GTCAACTGGG---C-A-G-T---TA-CG-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129180 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCT-T-G---------G----CTCAG---C-A-G-T---TG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129181 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-AC-C-AT-T-G----CTCAG---C-A-GTT---TG-TG-A--TTT--T------
gi|129182 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTTt
gi|129183 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129184 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATATT
gi|129185 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-A
gi|129186 : CCA-C-A-T-CG-C-TCACT-G-GAG-T-GA-CCT-TGG-CCC-T-A---------A----CTCAG---C-A-G-T---GG-TG-A--TTC--T------A-A--A--AGA-A-ATTT
gi|129187 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-CCT-TGG-TCA-T-G--CTGC-T-G----TTCAG---C-T-G-T---TG-TG-A--TTT--TTC----A-A--A--CAA-A-CTTTT
gi|129188 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-A---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129191 : CCA-C-A-T-CG-C-TCACC-T-CAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129192 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129193 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-C---GG-TA-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129194 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G---------A----TTCAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129195 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G---------A----TTCAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129196 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G---------A----TTCAG---CAA-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129197 : CCA-C-A-T-CG-C-TTATC-T-GAG-T-GA-CCT-T---CCCAT-GC-C-GT-T-G----TTCAG---C-A-G-T---TG-TA-A--TTC--T------T-A--T--CAG-A-ATTTT
gi|129199 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAA---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129200 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-GCC-T-G--CTGT-C-A----TTCAG---C-A-T-T---GG-TC-A--TTT--T------G-A--A--AAG-A-TTTTT
gi|129201 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129202 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129204 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCC-T-G---------G----ACCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129205 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGA-CCC-T-G--CAGT-T-G----GGCAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129207 : CCA-C-A-T-CA-C-TCACC-T-TAG-T-GA-CCT-TGG-CCC-T-G----G----------TCAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTTtatagaatct
gi|129208 : CCA-C-A-T-CG-A-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATTTT
gi|129209 : CCA-C-A-T-CG-C-TCTCC-T-GAG-T-GA-CGT-TGG-CCC-C-GC-C-AT-T-T----CACAG---C-A-G-T---TG-TG-A--TTT--TTTAATGA-A--A--AGG-A-ATTTT
gi|129211 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-TCC-T-G---------G----TTCAT---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTCT
gi|129212 : CCA-C-A-T-AG-T-TC-CC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CCGT-TTG----TTCAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--ATG---ATTTT
gi|129213 : CCT-C-A-T-CG-T-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-AC-C-AT-T-G----CTCAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129214 : CCA-C-A-T-AG-C-GCACA-T-GAG-T-GA-CTT-TGG-CAC-T-G--C-CA-T-T----TTCAG---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
gi|129215 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----TTCAG---C-A-G-T---GA-TG-A--TTT--C--------A--A--AAG-A-ATATT
gi|129216 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AGA-A-ATTT
gi|129218 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-CCC-T-G---------G----ATCAG---C-A-G-T---GG-TG-A--TGT--C------A-A--A--AAG-A-ATTTT
gi|129219 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T------AT-T-------TCGG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129220 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-CA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-T--TTT--T------A-A--A--AAG-A-ATTTT
gi|129221 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGGGCCC-A-G---------G----CTCAG---C-A-G-T---GG-TA-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129222 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-TCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTTA-G------A-A--A--AAA-A-ATTT
gi|129223 : CCA-C-A-T-CG-C-TCACC-T-GAT-A-GA-CCT-TGG-CCC-T-G---------G----CTCAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129224 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G---------G----CTCAG---C-A-G-T----G-TG-A--TTT--A------G-A--A--AAG-A-ATT
gi|129225 : CCA-T-A-T-CG-C-TCACC-T-GAG-A-GA-CCT-TGG-TCC-T-A--CTGT-T-G----TTCAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129226 : CCA-C-A-T-CA-C-GCACC-T-GAG-T-GA-CCT-TGG-CCC-T-A---------G----CTCAG---C-A-G-T---GG--G-A--TTT--T------C-A--AT-AAG-A-ATTTTt
gi|129227 : CCA-C-A-A-CG-C-TCACC-TTGAG-G-GG-CCT-TGG-GTC-T-G--CTAT-T-G----TTTAC---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129229 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-----------T-G----CTCAG---C-A-G-T---AG-TG-A--TTTAGG------A-A--A--AGA-A-ATTTT
gi|129230 : CCA-CCA-T-AG-C-TCACT-T-GAG-T-GA-CCT-TGG-CAC-T-G--CTGT-T-G----TTCAG---C-A-G-TACCGG-TA-A--TTT--T------A-A--A--AAG-AGATTTT
gi|129231 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-GA-T-GC-T-G----TTGAG---C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129232 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-GA-T-GTCT-G----TTGAGA--C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129233 : CCA-C-A-T-CG-C-TCACC-T-GAG-TTGA-TCT-TGG-CCC-A-G--C------------TCAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATT
gi|129234 : CCA-C-A-T-CG-C-TCACA-T-GAA-T-CA-TCT-TGG-CCC-T-GT-T-AT-T-G----TTCAGGTAC-A-G-T---GG-T-----TTT--T------T-A--A--AAG-A-TTTTT
gi|129235 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CAT-GGG-TCC-T----------------CTCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129236 : CCAGC-A-T-TG-C-TCAAC-T-GAG-T-GA-CCT-TGG-CC--T-G--C-GT-T-G----TTCAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129237 : CCA-C-A-T-CG-C-TCATC-T-GAG-T-GA-CCT-TGA-CCC-A-G---------G----CTCAG---C-A-G-T---GG-CG-A--TTC--T------T-A--A--AAT-A-ATTTTt
gi|129238 : CCATC-A-T-CGGC-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-C---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129239 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-----------T-G----CTCAG---C-A-G-T---AG-TG-A--TTT--T------G-T--ACTAAG-A-ATTCT
gi|129240 : CCA-C-A-T-CG-C-TCGTC-T-GAG-T-GA-TCT-TGC-CCC-T-G---------G----TTCAG---C-A-A-T---TT-CGAA--TTT--T------A-A--A--AAG-A-ATTT
gi|129241 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AGA-A-ATTTT
gi|129242 : CCA-C-A-T-TG-C-CCTCT-T-CAG-C-GA-C-T-TGG-CCC-T-G--C-TT-T-T----TTCAG---C-A-G-A---TG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129243 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GACCCT-TGG-CCC---------A-T-G----GTCAG---C-A-G-T---GG-TG-A--TTT--------------A--AAG-A-ATTTT
gi|129244 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G---------G----TTCAA---T-A-G-T---GG-TC-A--TTT--C------A-A--A--AAG-A-ATTTT
gi|129245 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---A-C-G-T---GG-AG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129246 : CCA-C-A-T-CG-C-TCAAC-T-CAG-T-GA-ACT-TGG-CAC-T-G---------G----TTCAG---G-A-G-T---GG-TG-A--TTT--C------C-A--A--AAG-A-ATTTT
gi|129247 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--CAA-A-ATTTT
gi|129248 : CCA-C-A-G-CA-C-TTACC-T-GAG-T-CT-CAT-TGG-CAC-T-T--CAGT-T-G----TTTAG---C-T-G-T---TG-TA-A--TTT--T------C-A--A--AAG-A-ATTCT
gi|129249 : CCA-C-A-T-CG-C-TCAGC-T-GAG-T-GA-CTT-TGG-CTC-C-G--CTGT-T-G----CCGAG---T-A-G-T---TT-TG-A--ATT--T------A-A--A--AAT-A-ATTTT
gi|129250 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-TTC-C---------T-G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTT
gi|129251 : CCA-C-A-T-CA-C-TCTCC-T-GAG-T-GA-CCT-TGG-CCC-C-C--A-G----G----CTCAG---T-A-T-T---AG-TG-A--TAT--T------A-A--A--AAG-A-ATTTT
gi|129252 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-AGG-C---GGCTG-A--TTT--T------AGA--A--AAG-A-
gi|129253 : CCA-C-A-T-TG-C-TCACC-T-GCG-T-AA---T-TA----C-T-G-----T-T-G----TTCAG---C-A-G-T---TG-TG-A--TTA--T------T-A--A--AAT-A-ATTTT
gi|129254 : CCA-C-AGT-CG---TCACC-T-GAG-T-GA-CCT-TTG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129255 : CCA---A-T-CG-C-TCACC-T-GAGAT-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A--TTT--A------AGA--A--AAG-A-ATTTT
gi|129256 : CCA-C-A-T-CG-C-TCACCCT-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCA----C-A-G-T---GG-TG-A--TTA--G------A-A--A--AAG-A-ATTTT
gi|129257 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-ATT-TGA-CCC-T-A--C-CT-T-G----TTCAG---T-T-G-T---TG-TG-A--TTT--
gi|129258 : CCA-C-A-T-TG---TCACC-T-GAG-T-GA-CCT-TGG-CCC-----------T-G----CTCAG---C-A-G-T---G---G-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129259 : CTA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGA-CCT-T-GA-C-AT-T-G----TTTGA---C-A-G-T---TG-CGAA--TTC--T------A-
gi|129260 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GG-CCT-TG------------------G----CTCAG---C-A-G-T---AG-TG-A--TTT--T------A-A--T--AAG-A-ATTTT
gi|129261 : CCA-C-A-T-CG-C-TCACC-C-GAG-T-GA-TCT-TCG-CCC---------A-T-G----TTCAA---C-A--------G-TG-A--TTT--TA-----A-A--A--AAG-A-ATTTT
gi|129262 : CCA-C-A-T-GG-C-TCACC-T-GAG-T-GA-CCT-TGG-CAC-T-G---------G----TTCAA---C-A-G-T---GG-CG-A--CTT--C------A-A--A--ATG-A-ATTTT
gi|129263 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCTATGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-AG-A--TTT--T------A-A--A--
gi|129303 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G---------G----CTCAG---C-A-G-T---GG-TG-A---TT--T------A-G--A--AAG-A-ATTg
gi|129304 : CA-C-A-C-CA-C-TCACC---GAA-T-GA-CCT-TGG-CCC-T-A-----T-C-A----TTCAG---C-A-G-T---TG-TG-A--TTT--C------T-A--T--AAG-A-AT
gi|129305 : CA-C-A-T-TG-T-TCACC-T-GAG-T-GA-TCT-GGG-CTC-T-GC-C-GT-T-G----TTTAG---C-A-A-T---GG-TG-A--TTT--T------
gi|129306 : CA-C-A-T-TG-C-TTACC-T-GAG-T-GA-CCT-TAG-CCC-T-G---------G----ATCAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTt
gi|129307 : CA-C-A-T-CA-C-TCACA-C-GAG-T-GA-CCC-TGG-CAC-T-GC-C-AT-T-T----TTCAG---C-A-G-TG--GG-TG-T--TTT--T------T-A--G--AAG-
gi|129308 : CA-C-G-T-TG-C-TTACC-T-GAG-T-AA-CCT-TGA-TAC-T-G--TTGT-T-G----TTCTG---C-A-A-T---TG-TG-A--TTT--T------G-A--A--ACG-A-ATTT
gi|129309 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CC--TGG-CCC-T-G---------G----CTTAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAGAA-ATTTT
gi|129315 : A-C-A-T-CG-C-TCACC-T-GAA-T-GG-CCT-TTG-TCC-T-GC-C-GT-T-G----TTTAG---T-A-G-T---TG-TA-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129316 : A-C-A-T-CG-T-TCACT-T-GAA-T-CA-ACT-TGG-CCC-T-AC-C-AT-T-G----TTCAG---A-T-G-T---TG-CG-A--TTT--T------T-A--A--AAG----TTTT
gi|129317 : A-C-A-T-CA-TGTCACC-T-GAG-T-GT-ACT-TGG-CCC-T-G--CTGT-T-G----TTCAG---A-A-G-T---TG-TGAA--TTT--T------
gi|129322 : -C-A-T-CG-C-TCATC-T-GAG-T-GG-CCT-TGG-CCC-TAA--C-CT-T-G----TTCAG---A-A-G-T---TA-TG-A--TTA--T------T-A--A--AAG-A-ATTT
gi|129323 : -C-A-TGCG-C-TCACC-G-GAG-T-GA-CCT-TGG-CCC-T-GC-C-GT-T----------------A-G-T---TG-TG-A--CTT--T------T-A--A--AAG-A-ATTTT
gi|129330 : -TCACC-T-GAG-T-GA-TCT-TGG-CCT-T-GGCT-AT-T-G----ATGCG---C-A-G-T---CG-TG-ATTTTT--T------A-A--G--AAG-A-ATTTT
gi|129334 : T-TGG-CCC-T-G--CCGT-T-G----TTCAG---T-A-G-T---AG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
Alignments
lowQualScore : 44444444444
lowQualScore : 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77777777777 0000 0 111 0 0 0 1111 0 1 00 11 44444444 00 11 0 0
lowQualScore : . . . . . . . . . . . . . . . ........... .... . ... . . . .... . . .. .. ........ .. .. . .
lowQualScore : 8 4 4 4 4 4 4 4 4 4 4 4 4 4 4 00000000000 9999 4 111 4 4 4 9999 4 2 55 33 55555555 66 00 4 5
consensus : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Reference ( family-204 ) : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129170 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129171 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129172 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T------TG-G--TTT--T------G-ATTA--AAG-A-ATTTT
gi|129173 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-GA-CG--T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--G--AAG-A-ATTT
gi|129174 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CTG-T---TA----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129175 : CCA-C-A-T-CA-C-TCACC-T-AAG-T-AA-CCT-TGG-CCC-T-GATG---T---TG----TT-CAG---C-A-G-T---GG-TG-G--TTT--T------T-A--A--AAG-A-ATTTT
gi|129176 : CCA-G-A-T-CA-C-TCACT-T-GAG-T-GG-CCT-TGG-TCA-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129177 : CCA-C-A-T-TG-C-CCACC-T-GGG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTTA-T------A-A--A--
gi|129178 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GA-TG-A--TTT--T------G-A--A--AAG-A-ATTTTg
gi|129179 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G--CCA-T---TGTCAACT-GGG---C-A-G-T---TA-CG-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129180 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCT-T-G-----------G----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129181 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-GTT---TG-TG-A--TTT--T------
gi|129182 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTTt
gi|129183 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129184 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATATT
gi|129185 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-A
gi|129186 : CCA-C-A-T-CG-C-TCACT-G-GAG-T-GA-CCT-TGG-CCC-T-A-----------A----CT-CAG---C-A-G-T---GG-TG-A--TTC--T------A-A--A--AGA-A-ATTT
gi|129187 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-CCT-TGG-TCA-T-G--C---TGC-TG----TT-CAG---C-T-G-T---TG-TG-A--TTT--TTC----A-A--A--CAA-A-CTTTT
gi|129188 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129191 : CCA-C-A-T-CG-C-TCACC-T-CAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129192 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129193 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TA-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129194 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129195 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129196 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---CAA-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129197 : CCA-C-A-T-CG-C-TTATC-T-GAG-T-GA-CCT-T---CCCAT-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TA-A--TTC--T------T-A--T--CAG-A-ATTTT
gi|129199 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAA---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129200 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-GCC-T-G--CTG-T---CA----TT-CAG---C-A-T-T---GG-TC-A--TTT--T------G-A--A--AAG-A-TTTTT
gi|129201 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129202 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129204 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCC-T-G-----------G----AC-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129205 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGA-CCC-T-G--CAG-T---TG----GG-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129207 : CCA-C-A-T-CA-C-TCACC-T-TAG-T-GA-CCT-TGG-CCC-T-G-----------G-----T-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTTtatagaatct
gi|129208 : CCA-C-A-T-CG-A-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATTTT
gi|129209 : CCA-C-A-T-CG-C-TCTCC-T-GAG-T-GA-CGT-TGG-CCC-C-G--CCA-T---TT----CA-CAG---C-A-G-T---TG-TG-A--TTT--TTTAATGA-A--A--AGG-A-ATTTT
gi|129211 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-TCC-T-G-----------G----TT-CAT---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTCT
gi|129212 : CCA-C-A-T-AG-T-TC-CC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CCGTT---TG----TT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--ATG---ATTTT
gi|129213 : CCT-C-A-T-CG-T-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129214 : CCA-C-A-T-AG-C-GCACA-T-GAG-T-GA-CTT-TGG-CAC-T-G--C---CA--TT----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
gi|129215 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----TT-CAG---C-A-G-T---GA-TG-A--TTT--C--------A--A--AAG-A-ATATT
gi|129216 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AGA-A-ATTT
gi|129218 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TGT--C------A-A--A--AAG-A-ATTTT
gi|129219 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-A--T---T----------T-CGG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129220 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-CA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-T--TTT--T------A-A--A--AAG-A-ATTTT
gi|129221 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGGGCCC-A-G-----------G----CT-CAG---C-A-G-T---GG-TA-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129222 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-TCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTTA-G------A-A--A--AAA-A-ATTT
gi|129223 : CCA-C-A-T-CG-C-TCACC-T-GAT-A-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129224 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T----G-TG-A--TTT--A------G-A--A--AAG-A-ATT
gi|129225 : CCA-T-A-T-CG-C-TCACC-T-GAG-A-GA-CCT-TGG-TCC-T-A--CTG-T---TG----TT-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129226 : CCA-C-A-T-CA-C-GCACC-T-GAG-T-GA-CCT-TGG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG--G-A--TTT--T------C-A--AT-AAG-A-ATTTTt
gi|129227 : CCA-C-A-A-CG-C-TCACC-TTGAG-G-GG-CCT-TGG-GTC-T-G--C---TAT-TG----TT-TAC---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129229 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTTAGG------A-A--A--AGA-A-ATTTT
gi|129230 : CCA-CCA-T-AG-C-TCACT-T-GAG-T-GA-CCT-TGG-CAC-T-G--CTG-T---TG----TT-CAG---C-A-G-TACCGG-TA-A--TTT--T------A-A--A--AAG-AGATTTT
gi|129231 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGC-TG----TT-GAG---C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129232 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGTCTG----TT-GAGA--C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129233 : CCA-C-A-T-CG-C-TCACC-T-GAG-TTGA-TCT-TGG-CCC-A-G--C---T------------CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATT
gi|129234 : CCA-C-A-T-CG-C-TCACA-T-GAA-T-CA-TCT-TGG-CCC-T-G--TTA-T---TG----TT-CAGGTAC-A-G-T---GG-T-----TTT--T------T-A--A--AAG-A-TTTTT
gi|129235 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CAT-GGG-TCC-T------------------CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129236 : CCAGC-A-T-TG-C-TCAAC-T-GAG-T-GA-CCT-TGG--CC-T-G--CG--T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129237 : CCA-C-A-T-CG-C-TCATC-T-GAG-T-GA-CCT-TGA-CCC-A-G-----------G----CT-CAG---C-A-G-T---GG-CG-A--TTC--T------T-A--A--AAT-A-ATTTTt
gi|129238 : CCATC-A-T-CGGC-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129239 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------G-T--ACTAAG-A-ATTCT
gi|129240 : CCA-C-A-T-CG-C-TCGTC-T-GAG-T-GA-TCT-TGC-CCC-T-G-----------G----TT-CAG---C-A-A-T---TT-CGAA--TTT--T------A-A--A--AAG-A-ATTT
gi|129241 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AGA-A-ATTTT
gi|129242 : CCA-C-A-T-TG-C-CCTCT-T-CAG-C-GA-C-T-TGG-CCC-T-G--C---T---TT----TTTCAG---C-A-G-A---TG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129243 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GACCCT-TGG-CC-------C---A---TG----GT-CAG---C-A-G-T---GG-TG-A--TTT--------------A--AAG-A-ATTTT
gi|129244 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G-----------G----TT-CAA---T-A-G-T---GG-TC-A--TTT--C------A-A--A--AAG-A-ATTTT
gi|129245 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---A-C-G-T---GG-AG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129246 : CCA-C-A-T-CG-C-TCAAC-T-CAG-T-GA-ACT-TGG-CAC-T-G-----------G----TT-CAG---G-A-G-T---GG-TG-A--TTT--C------C-A--A--AAG-A-ATTTT
gi|129247 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--CAA-A-ATTTT
gi|129248 : CCA-C-A-G-CA-C-TTACC-T-GAG-T-CT-CAT-TGG-CAC-T-T--CAG-T---TG----TT-TAG---C-T-G-T---TG-TA-A--TTT--T------C-A--A--AAG-A-ATTCT
gi|129249 : CCA-C-A-T-CG-C-TCAGC-T-GAG-T-GA-CTT-TGG-CTC-C-G--CTG-T---TG----CC-GAG---T-A-G-T---TT-TG-A--ATT--T------A-A--A--AAT-A-ATTTT
gi|129250 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-----T-T--C---C---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTT
gi|129251 : CCA-C-A-T-CA-C-TCTCC-T-GAG-T-GA-CCT-TGG-CCC-C----C---A---GG----CT-CAG---T-A-T-T---AG-TG-A--TAT--T------A-A--A--AAG-A-ATTTT
gi|129252 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-AGG-C---GGCTG-A--TTT--T------AGA--A--AAG-A-
gi|129253 : CCA-C-A-T-TG-C-TCACC-T-GCG-T-AA---T-TA----C-T-G------T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTA--T------T-A--A--AAT-A-ATTTT
gi|129254 : CCA-C-AGT-CG---TCACC-T-GAG-T-GA-CCT-TTG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129255 : CCA---A-T-CG-C-TCACC-T-GAGAT-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------AGA--A--AAG-A-ATTTT
gi|129256 : CCA-C-A-T-CG-C-TCACCCT-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CA----C-A-G-T---GG-TG-A--TTA--G------A-A--A--AAG-A-ATTTT
gi|129257 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-ATT-TGA-CCC-T-AC-C---T---TG----TT-CAG---T-T-G-T---TG-TG-A--TTT--
gi|129258 : CCA-C-A-T-TG---TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---G---G-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129259 : CTA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGA-CCT-T-GA-CA--T---TG----TT-TGA---C-A-G-T---TG-CGAA--TTC--T------A-
gi|129260 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GG-CCT-TG--------------------G----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------A-A--T--AAG-A-ATTTT
gi|129261 : CCA-C-A-T-CG-C-TCACC-C-GAG-T-GA-TCT-TCG-CC-------C---A---TG----TT-CAA---C-A--------G-TG-A--TTT--TA-----A-A--A--AAG-A-ATTTT
gi|129262 : CCA-C-A-T-GG-C-TCACC-T-GAG-T-GA-CCT-TGG-CAC-T-G-----------G----TT-CAA---C-A-G-T---GG-CG-A--CTT--C------A-A--A--ATG-A-ATTTT
gi|129263 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCTATGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-AG-A--TTT--T------A-A--A--
gi|129303 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A---TT--T------A-G--A--AAG-A-ATTg
gi|129304 : CA-C-A-C-CA-C-TCACC---GAA-T-GA-CCT-TGG-CCC-T-A------T---CA----TT-CAG---C-A-G-T---TG-TG-A--TTT--C------T-A--T--AAG-A-AT
gi|129305 : CA-C-A-T-TG-T-TCACC-T-GAG-T-GA-TCT-GGG-CTC-T-G--CCG-T---TG----TT-TAG---C-A-A-T---GG-TG-A--TTT--T------
gi|129306 : CA-C-A-T-TG-C-TTACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTt
gi|129307 : CA-C-A-T-CA-C-TCACA-C-GAG-T-GA-CCC-TGG-CAC-T-G--CCA-T---TT----TT-CAG---C-A-G-TG--GG-TG-T--TTT--T------T-A--G--AAG-
gi|129308 : CA-C-G-T-TG-C-TTACC-T-GAG-T-AA-CCT-TGA-TAC-T-G--TTG-T---TG----TT-CTG---C-A-A-T---TG-TG-A--TTT--T------G-A--A--ACG-A-ATTT
gi|129309 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CC--TGG-CCC-T-G-----------G----CT-TAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAGAA-ATTTT
gi|129315 : A-C-A-T-CG-C-TCACC-T-GAA-T-GG-CCT-TTG-TCC-T-G--CCG-T---TG----TT-TAG---T-A-G-T---TG-TA-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129316 : A-C-A-T-CG-T-TCACT-T-GAA-T-CA-ACT-TGG-CCC-T-A--CCA-T---TG----TT-CAG---A-T-G-T---TG-CG-A--TTT--T------T-A--A--AAG----TTTT
gi|129317 : A-C-A-T-CA-TGTCACC-T-GAG-T-GT-ACT-TGG-CCC-T-G--CTG-T---TG----TT-CAG---A-A-G-T---TG-TGAA--TTT--T------
gi|129322 : -C-A-T-CG-C-TCATC-T-GAG-T-GG-CCT-TGG-CCC-T-AACC---T---TG----TT-CAG---A-A-G-T---TA-TG-A--TTA--T------T-A--A--AAG-A-ATTT
gi|129323 : -C-A-TGCG-C-TCACC-G-GAG-T-GA-CCT-TGG-CCC-T-G--C-------CG----TT---------A-G-T---TG-TG-A--CTT--T------T-A--A--AAG-A-ATTTT
gi|129330 : -TCACC-T-GAG-T-GA-TCT-TGG-CCT-TGG--CTA-T---TG----AT-GCG---C-A-G-T---CG-TG-ATTTTT--T------A-A--G--AAG-A-ATTTT
gi|129334 : T-TGG-CCC-T-G--CCG-T---TG----TT-CAG---T-A-G-T---AG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
Alignments
lowQualScore : 44444444444
lowQualScore : 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77777777777 0000 0 111 0 0 0 1111 0 1 00 11 44444444 00 11 0 0
lowQualScore : . . . . . . . . . . . . . . . ........... .... . ... . . . .... . . .. .. ........ .. .. . .
lowQualScore : 8 4 4 4 4 4 4 4 4 4 4 4 4 4 4 00000000000 9999 4 111 4 4 4 9999 4 2 55 33 55555555 66 00 4 5
consensus : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Reference ( family-204 ) : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129170 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129171 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129172 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T------TG-G--TTT--T------G-ATTA--AAG-A-ATTTT
gi|129173 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-GA-CG--T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--G--AAG-A-ATTT
gi|129174 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CTG-T---TA----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129175 : CCA-C-A-T-CA-C-TCACC-T-AAG-T-AA-CCT-TGG-CCC-T-GATG---T---TG----TT-CAG---C-A-G-T---GG-TG-G--TTT--T------T-A--A--AAG-A-ATTTT
gi|129176 : CCA-G-A-T-CA-C-TCACT-T-GAG-T-GG-CCT-TGG-TCA-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129177 : CCA-C-A-T-TG-C-CCACC-T-GGG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTTA-T------A-A--A--
gi|129178 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GA-TG-A--TTT--T------G-A--A--AAG-A-ATTTTg
gi|129179 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G--CCA-T---TGTCAACT-GGG---C-A-G-T---TA-CG-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129180 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCT-T-G-----------G----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129181 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-GTT---TG-TG-A--TTT--T------
gi|129182 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTTt
gi|129183 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129184 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATATT
gi|129185 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-A
gi|129186 : CCA-C-A-T-CG-C-TCACT-G-GAG-T-GA-CCT-TGG-CCC-T-A-----------A----CT-CAG---C-A-G-T---GG-TG-A--TTC--T------A-A--A--AGA-A-ATTT
gi|129187 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-CCT-TGG-TCA-T-G--C---TGC-TG----TT-CAG---C-T-G-T---TG-TG-A--TTT--TTC----A-A--A--CAA-A-CTTTT
gi|129188 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129191 : CCA-C-A-T-CG-C-TCACC-T-CAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129192 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129193 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TA-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129194 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129195 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129196 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---CAA-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129197 : CCA-C-A-T-CG-C-TTATC-T-GAG-T-GA-CCT-T---CCCAT-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TA-A--TTC--T------T-A--T--CAG-A-ATTTT
gi|129199 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAA---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129200 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-GCC-T-G--CTG-T---CA----TT-CAG---C-A-T-T---GG-TC-A--TTT--T------G-A--A--AAG-A-TTTTT
gi|129201 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129202 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129204 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCC-T-G-----------G----AC-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129205 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGA-CCC-T-G--CAG-T---TG----GG-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129207 : CCA-C-A-T-CA-C-TCACC-T-TAG-T-GA-CCT-TGG-CCC-T-G-----------G-----T-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTTtatagaatct
gi|129208 : CCA-C-A-T-CG-A-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATTTT
gi|129209 : CCA-C-A-T-CG-C-TCTCC-T-GAG-T-GA-CGT-TGG-CCC-C-G--CCA-T---TT----CA-CAG---C-A-G-T---TG-TG-A--TTT--TTTAATGA-A--A--AGG-A-ATTTT
gi|129211 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-TCC-T-G-----------G----TT-CAT---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTCT
gi|129212 : CCA-C-A-T-AG-T-TC-CC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CCGTT---TG----TT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--ATG---ATTTT
gi|129213 : CCT-C-A-T-CG-T-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129214 : CCA-C-A-T-AG-C-GCACA-T-GAG-T-GA-CTT-TGG-CAC-T-G--C---CA--TT----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
gi|129215 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----TT-CAG---C-A-G-T---GA-TG-A--TTT--C--------A--A--AAG-A-ATATT
gi|129216 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AGA-A-ATTT
gi|129218 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TGT--C------A-A--A--AAG-A-ATTTT
gi|129219 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-A--T---T----------T-CGG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129220 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-CA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-T--TTT--T------A-A--A--AAG-A-ATTTT
gi|129221 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGGGCCC-A-G-----------G----CT-CAG---C-A-G-T---GG-TA-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129222 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-TCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTTA-G------A-A--A--AAA-A-ATTT
gi|129223 : CCA-C-A-T-CG-C-TCACC-T-GAT-A-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129224 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T----G-TG-A--TTT--A------G-A--A--AAG-A-ATT
gi|129225 : CCA-T-A-T-CG-C-TCACC-T-GAG-A-GA-CCT-TGG-TCC-T-A--CTG-T---TG----TT-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129226 : CCA-C-A-T-CA-C-GCACC-T-GAG-T-GA-CCT-TGG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG--G-A--TTT--T------C-A--AT-AAG-A-ATTTTt
gi|129227 : CCA-C-A-A-CG-C-TCACC-TTGAG-G-GG-CCT-TGG-GTC-T-G--C---TAT-TG----TT-TAC---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129229 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTTAGG------A-A--A--AGA-A-ATTTT
gi|129230 : CCA-CCA-T-AG-C-TCACT-T-GAG-T-GA-CCT-TGG-CAC-T-G--CTG-T---TG----TT-CAG---C-A-G-TACCGG-TA-A--TTT--T------A-A--A--AAG-AGATTTT
gi|129231 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGC-TG----TT-GAG---C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129232 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGTCTG----TT-GAGA--C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129233 : CCA-C-A-T-CG-C-TCACC-T-GAG-TTGA-TCT-TGG-CCC-A-G--C---T------------CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATT
gi|129234 : CCA-C-A-T-CG-C-TCACA-T-GAA-T-CA-TCT-TGG-CCC-T-G--TTA-T---TG----TT-CAGGTAC-A-G-T---GG-T-----TTT--T------T-A--A--AAG-A-TTTTT
gi|129235 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CAT-GGG-TCC-T------------------CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129236 : CCAGC-A-T-TG-C-TCAAC-T-GAG-T-GA-CCT-TGG--CC-T-G--CG--T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129237 : CCA-C-A-T-CG-C-TCATC-T-GAG-T-GA-CCT-TGA-CCC-A-G-----------G----CT-CAG---C-A-G-T---GG-CG-A--TTC--T------T-A--A--AAT-A-ATTTTt
gi|129238 : CCATC-A-T-CGGC-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129239 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------G-T--ACTAAG-A-ATTCT
gi|129240 : CCA-C-A-T-CG-C-TCGTC-T-GAG-T-GA-TCT-TGC-CCC-T-G-----------G----TT-CAG---C-A-A-T---TT-CGAA--TTT--T------A-A--A--AAG-A-ATTT
gi|129241 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AGA-A-ATTTT
gi|129242 : CCA-C-A-T-TG-C-CCTCT-T-CAG-C-GA-C-T-TGG-CCC-T-G--C---T---TT----TTTCAG---C-A-G-A---TG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129243 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GACCCT-TGG-CC-------C---A---TG----GT-CAG---C-A-G-T---GG-TG-A--TTT--------------A--AAG-A-ATTTT
gi|129244 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G-----------G----TT-CAA---T-A-G-T---GG-TC-A--TTT--C------A-A--A--AAG-A-ATTTT
gi|129245 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---A-C-G-T---GG-AG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129246 : CCA-C-A-T-CG-C-TCAAC-T-CAG-T-GA-ACT-TGG-CAC-T-G-----------G----TT-CAG---G-A-G-T---GG-TG-A--TTT--C------C-A--A--AAG-A-ATTTT
gi|129247 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--CAA-A-ATTTT
gi|129248 : CCA-C-A-G-CA-C-TTACC-T-GAG-T-CT-CAT-TGG-CAC-T-T--CAG-T---TG----TT-TAG---C-T-G-T---TG-TA-A--TTT--T------C-A--A--AAG-A-ATTCT
gi|129249 : CCA-C-A-T-CG-C-TCAGC-T-GAG-T-GA-CTT-TGG-CTC-C-G--CTG-T---TG----CC-GAG---T-A-G-T---TT-TG-A--ATT--T------A-A--A--AAT-A-ATTTT
gi|129250 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-----T-T--C---C---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTT
gi|129251 : CCA-C-A-T-CA-C-TCTCC-T-GAG-T-GA-CCT-TGG-CCC-C----C---A---GG----CT-CAG---T-A-T-T---AG-TG-A--TAT--T------A-A--A--AAG-A-ATTTT
gi|129252 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-AGG-C---GGCTG-A--TTT--T------AGA--A--AAG-A-
gi|129253 : CCA-C-A-T-TG-C-TCACC-T-GCG-T-AA---T-TA----C-T-G------T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTA--T------T-A--A--AAT-A-ATTTT
gi|129254 : CCA-C-AGT-CG---TCACC-T-GAG-T-GA-CCT-TTG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129255 : CCA---A-T-CG-C-TCACC-T-GAGAT-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------AGA--A--AAG-A-ATTTT
gi|129256 : CCA-C-A-T-CG-C-TCACCCT-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CA----C-A-G-T---GG-TG-A--TTA--G------A-A--A--AAG-A-ATTTT
gi|129257 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-ATT-TGA-CCC-T-AC-C---T---TG----TT-CAG---T-T-G-T---TG-TG-A--TTT--
gi|129258 : CCA-C-A-T-TG---TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---G---G-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129259 : CTA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGA-CCT-T-GA-CA--T---TG----TT-TGA---C-A-G-T---TG-CGAA--TTC--T------A-
gi|129260 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GG-CCT-TG--------------------G----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------A-A--T--AAG-A-ATTTT
gi|129261 : CCA-C-A-T-CG-C-TCACC-C-GAG-T-GA-TCT-TCG-CC-------C---A---TG----TT-CAA---C-A--------G-TG-A--TTT--TA-----A-A--A--AAG-A-ATTTT
gi|129262 : CCA-C-A-T-GG-C-TCACC-T-GAG-T-GA-CCT-TGG-CAC-T-G-----------G----TT-CAA---C-A-G-T---GG-CG-A--CTT--C------A-A--A--ATG-A-ATTTT
gi|129263 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCTATGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-AG-A--TTT--T------A-A--A--
gi|129303 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A---TT--T------A-G--A--AAG-A-ATTg
gi|129304 : CA-C-A-C-CA-C-TCACC---GAA-T-GA-CCT-TGG-CCC-T-A------T---CA----TT-CAG---C-A-G-T---TG-TG-A--TTT--C------T-A--T--AAG-A-AT
gi|129305 : CA-C-A-T-TG-T-TCACC-T-GAG-T-GA-TCT-GGG-CTC-T-G--CCG-T---TG----TT-TAG---C-A-A-T---GG-TG-A--TTT--T------
gi|129306 : CA-C-A-T-TG-C-TTACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTt
gi|129307 : CA-C-A-T-CA-C-TCACA-C-GAG-T-GA-CCC-TGG-CAC-T-G--CCA-T---TT----TT-CAG---C-A-G-TG--GG-TG-T--TTT--T------T-A--G--AAG-
gi|129308 : CA-C-G-T-TG-C-TTACC-T-GAG-T-AA-CCT-TGA-TAC-T-G--TTG-T---TG----TT-CTG---C-A-A-T---TG-TG-A--TTT--T------G-A--A--ACG-A-ATTT
gi|129309 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CC--TGG-CCC-T-G-----------G----CT-TAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAGAA-ATTTT
gi|129315 : A-C-A-T-CG-C-TCACC-T-GAA-T-GG-CCT-TTG-TCC-T-G--CCG-T---TG----TT-TAG---T-A-G-T---TG-TA-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129316 : A-C-A-T-CG-T-TCACT-T-GAA-T-CA-ACT-TGG-CCC-T-A--CCA-T---TG----TT-CAG---A-T-G-T---TG-CG-A--TTT--T------T-A--A--AAG----TTTT
gi|129317 : A-C-A-T-CA-TGTCACC-T-GAG-T-GT-ACT-TGG-CCC-T-G--CTG-T---TG----TT-CAG---A-A-G-T---TG-TGAA--TTT--T------
gi|129322 : -C-A-T-CG-C-TCATC-T-GAG-T-GG-CCT-TGG-CCC-T-AACC---T---TG----TT-CAG---A-A-G-T---TA-TG-A--TTA--T------T-A--A--AAG-A-ATTT
gi|129323 : -C-A-TGCG-C-TCACC-G-GAG-T-GA-CCT-TGG-CCC-T-G--C-------CG----TT---------A-G-T---TG-TG-A--CTT--T------T-A--A--AAG-A-ATTTT
gi|129330 : -TCACC-T-GAG-T-GA-TCT-TGG-CCT-TGG--CTA-T---TG----AT-GCG---C-A-G-T---CG-TG-ATTTTT--T------A-A--G--AAG-A-ATTTT
gi|129334 : T-TGG-CCC-T-G--CCG-T---TG----TT-CAG---T-A-G-T---AG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
blockSeqs : CCGTTT GTA ACCG A AG TTAATGA CT
blockSeqs : ATGTCT A GG A A TCA T
blockSeqs : CCGTT . T A A AG .
blockSeqs : CCGTT . G . . AG .
blockSeqs : ACGTT . G . . AA .
blockSeqs : CTGTT . G . . T .
blockSeqs : ATGTT . G . . G .
blockSeqs : CCGTT . G . . T .
blockSeqs : CCGTT . G . . A .
blockSeqs : CCATT . T . . T .
blockSeqs : CCATT . T . . C .
blockSeqs : CTGCT . T . . A .
blockSeqs : CCGTT . G . . G .
blockSeqs : CTGTC . G . . T .
blockSeqs : CAGTT . G . . A .
blockSeqs : CCATT . G . . G .
blockSeqs : CCATT . G . . A .
blockSeqs : CTGTT . T . . A .
blockSeqs : CTATT . G . . A .
blockSeqs : CTGTT . G . . A .
blockSeqs : ATGCT . G . . A .
blockSeqs : TTATT . G . . A .
blockSeqs : CAGTT . T . . A .
blockSeqs : CTGTT . G . . G .
blockSeqs : ACATT . G . . A .
blockSeqs : CCGTT . G . . A .
blockSeqs : CCATT . G . . A .
blockSeqs : TTGTT . G . . T .
blockSeqs : CCGTT . T . . G .
blockSeqs : CCATT . G . . G .
blockSeqs : CTGTT . G . . A .
blockSeqs : ACCTT . T . . G .
blockSeqs : CTATT . G . . A .
blockSeqs : CCGTT . G . . A .
blockSeqs : CCAT . T . . A .
blockSeqs : CGTT . G . . A .
blockSeqs : CCTT . G . . A .
blockSeqs : CTT . G . . T .
blockSeqs : CAT . G . . A .
blockSeqs : CCT . G . . A .
blockSeqs : CAG . G . . A .
blockSeqs : CAT . G . . A .
blockSeqs : AT . G . . A .
blockSeqs : AT . G . . A .
blockSeqs : AT . T . . A .
blockSeqs : TT . G . . G .
blockSeqs : CT . G . . C .
blockSeqs : TT . A . . T .
blockSeqs : TC . T . . A .
blockSeqs : CC . T . . A .
blockSeqs : T . G . . T .
blockSeqs : T . G . . T .
blockSeqs : T . G . . A .
blockSeqs : . . T . . T .
blockSeqs : . . G . . A .
blockSeqs : . . G . . T .
blockSeqs : . . A . . G .
blockSeqs : . . T . . G .
blockSeqs : . . G . . A .
blockSeqs : . . T . . G .
blockSeqs : . . G . . C .
blockSeqs : . . G . . A .
blockSeqs : . . G . . G .
blockSeqs : . . G . . C .
blockSeqs : . . G . . G .
blockSeqs : . . T . . C .
blockSeqs : . . T . . A .
blockSeqs : . . G . . G .
blockSeqs : . . A . . A .
blockSeqs : . . G . . T .
blockSeqs : . . T . . G .
blockSeqs : . . G . . A .
blockSeqs : . . G . . A .
blockSeqs : . . G . . A .
blockSeqs : . . T . . A .
blockSeqs : . . G . . A .
blockSeqs : . . T . . A .
blockSeqs : . . A . . A .
blockSeqs : . . G . . T .
blockSeqs : . . G . . A .
blockSeqs : . . G . . T .
blockSeqs : . . T . . G .
blockSeqs : . . G . . G .
blockSeqs : . . G . . T .
blockSeqs : . . T . . T .
blockSeqs : . . G . . T .
blockSeqs : . . T . . T .
blockSeqs : . . T . . A .
blockSeqs : . . T . . T .
blockSeqs : . . T . . . .
blockSeqs : . . T . . .
blockSeqs : . . C . .
blockSeqs : . . A . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqCons : CTT********
originalCons : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
finalCons : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-GCTT--------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Alignments
lowQualScore : 44444444444
lowQualScore : 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77777777777 0000 0 111 0 0 0 1111 0 1 00 11 44444444 00 11 0 0
lowQualScore : . . . . . . . . . . . . . . . ........... .... . ... . . . .... . . .. .. ........ .. .. . .
lowQualScore : 8 4 4 4 4 4 4 4 4 4 4 4 4 4 4 00000000000 9999 4 111 4 4 4 9999 4 2 55 33 55555555 66 00 4 5
consensus : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
Reference ( family-204 ) : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--C---T---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129170 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129171 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129172 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T------TG-G--TTT--T------G-ATTA--AAG-A-ATTTT
gi|129173 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-GA-CG--T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--G--AAG-A-ATTT
gi|129174 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CTG-T---TA----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129175 : CCA-C-A-T-CA-C-TCACC-T-AAG-T-AA-CCT-TGG-CCC-T-GATG---T---TG----TT-CAG---C-A-G-T---GG-TG-G--TTT--T------T-A--A--AAG-A-ATTTT
gi|129176 : CCA-G-A-T-CA-C-TCACT-T-GAG-T-GG-CCT-TGG-TCA-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129177 : CCA-C-A-T-TG-C-CCACC-T-GGG-T-GA-TCT-TGG-CCC-T-G--CCG-T---TG----TT-CAG---C-A-G-T---GG-TG-A--TTTA-T------A-A--A--
gi|129178 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GA-TG-A--TTT--T------G-A--A--AAG-A-ATTTTg
gi|129179 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G--CCA-T---TGTCAACT-GGG---C-A-G-T---TA-CG-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129180 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCT-T-G-----------G----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129181 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-GTT---TG-TG-A--TTT--T------
gi|129182 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTTt
gi|129183 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129184 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATATT
gi|129185 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-A
gi|129186 : CCA-C-A-T-CG-C-TCACT-G-GAG-T-GA-CCT-TGG-CCC-T-A-----------A----CT-CAG---C-A-G-T---GG-TG-A--TTC--T------A-A--A--AGA-A-ATTT
gi|129187 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-CCT-TGG-TCA-T-G--C---TGC-TG----TT-CAG---C-T-G-T---TG-TG-A--TTT--TTC----A-A--A--CAA-A-CTTTT
gi|129188 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129191 : CCA-C-A-T-CG-C-TCACC-T-CAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129192 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129193 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TA-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129194 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129195 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---C-A-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129196 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-G--A---T----------T-CAG---CAA-G-T----G-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129197 : CCA-C-A-T-CG-C-TTATC-T-GAG-T-GA-CCT-T---CCCAT-G--CCG-T---TG----TT-CAG---C-A-G-T---TG-TA-A--TTC--T------T-A--T--CAG-A-ATTTT
gi|129199 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAA---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129200 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-GCC-T-G--CTG-T---CA----TT-CAG---C-A-T-T---GG-TC-A--TTT--T------G-A--A--AAG-A-TTTTT
gi|129201 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129202 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-TCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129204 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCC-T-G-----------G----AC-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129205 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGA-CCC-T-G--CAG-T---TG----GG-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129207 : CCA-C-A-T-CA-C-TCACC-T-TAG-T-GA-CCT-TGG-CCC-T-G-----------G-----T-CAG---C-A-G-T---GG-TC-A--TTT--T------A-A--A--AAG-A-ATTTTtatagaatct
gi|129208 : CCA-C-A-T-CG-A-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATTTT
gi|129209 : CCA-C-A-T-CG-C-TCTCC-T-GAG-T-GA-CGT-TGG-CCC-C-G--CCA-T---TT----CA-CAG---C-A-G-T---TG-TG-A--TTT--TTTAATGA-A--A--AGG-A-ATTTT
gi|129211 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-TCC-T-G-----------G----TT-CAT---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTCT
gi|129212 : CCA-C-A-T-AG-T-TC-CC-T-GAG-T-GA-CCT-TGG-CCC-T-G--CCGTT---TG----TT-CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--ATG---ATTTT
gi|129213 : CCT-C-A-T-CG-T-TCACC-T-GAG-T-GA-ACT-TGG-CCC-T-A--CCA-T---TG----CT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129214 : CCA-C-A-T-AG-C-GCACA-T-GAG-T-GA-CTT-TGG-CAC-T-G--C---CA--TT----TT-CAG---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT
gi|129215 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----TT-CAG---C-A-G-T---GA-TG-A--TTT--C--------A--A--AAG-A-ATATT
gi|129216 : CCA-C-A-T-TG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AGA-A-ATTT
gi|129218 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CTT-TGG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TGT--C------A-A--A--AAG-A-ATTTT
gi|129219 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC-T-A--T---T----------T-CGG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTT
gi|129220 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-CA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-T--TTT--T------A-A--A--AAG-A-ATTTT
gi|129221 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGGGCCC-A-G-----------G----CT-CAG---C-A-G-T---GG-TA-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129222 : CCA-C-A-T-CG-C-TTACC-T-GAG-T-GA-TCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTTA-G------A-A--A--AAA-A-ATTT
gi|129223 : CCA-C-A-T-CG-C-TCACC-T-GAT-A-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---T-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129224 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T----G-TG-A--TTT--A------G-A--A--AAG-A-ATT
gi|129225 : CCA-T-A-T-CG-C-TCACC-T-GAG-A-GA-CCT-TGG-TCC-T-A--CTG-T---TG----TT-CAG---C-A-G-T---TG-AG-A--TTT--T------
gi|129226 : CCA-C-A-T-CA-C-GCACC-T-GAG-T-GA-CCT-TGG-CCC-T-A-----------G----CT-CAG---C-A-G-T---GG--G-A--TTT--T------C-A--AT-AAG-A-ATTTTt
gi|129227 : CCA-C-A-A-CG-C-TCACC-TTGAG-G-GG-CCT-TGG-GTC-T-G--C---TAT-TG----TT-TAC---C-A-G-T---GG-TG-A--TTT--T------T-A--A--AAG-A-ATTTT
gi|129229 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTTAGG------A-A--A--AGA-A-ATTTT
gi|129230 : CCA-CCA-T-AG-C-TCACT-T-GAG-T-GA-CCT-TGG-CAC-T-G--CTG-T---TG----TT-CAG---C-A-G-TACCGG-TA-A--TTT--T------A-A--A--AAG-AGATTTT
gi|129231 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGC-TG----TT-GAG---C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129232 : CTA-C-A-C-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G--A---TGTCTG----TT-GAGA--C-T-G-T---TG-TG-A--TTT--T------T-G--A--AAG-A-
gi|129233 : CCA-C-A-T-CG-C-TCACC-T-GAG-TTGA-TCT-TGG-CCC-A-G--C---T------------CAG---C-A-A-T---GG-TG-A--TTT--T------A-A--A--AGG-A-ATT
gi|129234 : CCA-C-A-T-CG-C-TCACA-T-GAA-T-CA-TCT-TGG-CCC-T-G--TTA-T---TG----TT-CAGGTAC-A-G-T---GG-T-----TTT--T------T-A--A--AAG-A-TTTTT
gi|129235 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CAT-GGG-TCC-T------------------CT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTTT
gi|129236 : CCAGC-A-T-TG-C-TCAAC-T-GAG-T-GA-CCT-TGG--CC-T-G--CG--T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTT--T------
gi|129237 : CCA-C-A-T-CG-C-TCATC-T-GAG-T-GA-CCT-TGA-CCC-A-G-----------G----CT-CAG---C-A-G-T---GG-CG-A--TTC--T------T-A--A--AAT-A-ATTTTt
gi|129238 : CCATC-A-T-CGGC-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-C---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129239 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CAT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------G-T--ACTAAG-A-ATTCT
gi|129240 : CCA-C-A-T-CG-C-TCGTC-T-GAG-T-GA-TCT-TGC-CCC-T-G-----------G----TT-CAG---C-A-A-T---TT-CGAA--TTT--T------A-A--A--AAG-A-ATTT
gi|129241 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-T-G-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AGA-A-ATTTT
gi|129242 : CCA-C-A-T-TG-C-CCTCT-T-CAG-C-GA-C-T-TGG-CCC-T-G--C---T---TT----TTTCAG---C-A-G-A---TG-TG-A--TTT--T------C-A--A--AAG-A-ATTTT
gi|129243 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GACCCT-TGG-CC-------C---A---TG----GT-CAG---C-A-G-T---GG-TG-A--TTT--------------A--AAG-A-ATTTT
gi|129244 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-AA-CCT-TGG-CCA-T-G-----------G----TT-CAA---T-A-G-T---GG-TC-A--TTT--C------A-A--A--AAG-A-ATTTT
gi|129245 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---A-C-G-T---GG-AG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129246 : CCA-C-A-T-CG-C-TCAAC-T-CAG-T-GA-ACT-TGG-CAC-T-G-----------G----TT-CAG---G-A-G-T---GG-TG-A--TTT--C------C-A--A--AAG-A-ATTTT
gi|129247 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--CAA-A-ATTTT
gi|129248 : CCA-C-A-G-CA-C-TTACC-T-GAG-T-CT-CAT-TGG-CAC-T-T--CAG-T---TG----TT-TAG---C-T-G-T---TG-TA-A--TTT--T------C-A--A--AAG-A-ATTCT
gi|129249 : CCA-C-A-T-CG-C-TCAGC-T-GAG-T-GA-CTT-TGG-CTC-C-G--CTG-T---TG----CC-GAG---T-A-G-T---TT-TG-A--ATT--T------A-A--A--AAT-A-ATTTT
gi|129250 : CCA-C-A-T-CG-C-TCAC--T-GAG-T-GA-CCT-TGG-----T-T--C---C---TG----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTT
gi|129251 : CCA-C-A-T-CA-C-TCTCC-T-GAG-T-GA-CCT-TGG-CCC-C----C---A---GG----CT-CAG---T-A-T-T---AG-TG-A--TAT--T------A-A--A--AAG-A-ATTTT
gi|129252 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-AGG-C---GGCTG-A--TTT--T------AGA--A--AAG-A-
gi|129253 : CCA-C-A-T-TG-C-TCACC-T-GCG-T-AA---T-TA----C-T-G------T---TG----TT-CAG---C-A-G-T---TG-TG-A--TTA--T------T-A--A--AAT-A-ATTTT
gi|129254 : CCA-C-AGT-CG---TCACC-T-GAG-T-GA-CCT-TTG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAG-A-ATTTT
gi|129255 : CCA---A-T-CG-C-TCACC-T-GAGAT-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A--TTT--A------AGA--A--AAG-A-ATTTT
gi|129256 : CCA-C-A-T-CG-C-TCACCCT-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CA----C-A-G-T---GG-TG-A--TTA--G------A-A--A--AAG-A-ATTTT
gi|129257 : CCA-C-A-T-CA-C-TCACC-T-GAG-T-CA-ATT-TGA-CCC-T-AC-C---T---TG----TT-CAG---T-T-G-T---TG-TG-A--TTT--
gi|129258 : CCA-C-A-T-TG---TCACC-T-GAG-T-GA-CCT-TGG-CCC--------------TG----CT-CAG---C-A-G-T---G---G-A--TTT--T------A-C--A--AAG-A-ATTTT
gi|129259 : CTA-C-A-T-CA-C-TCACC-T-GAG-T-GA-CCT-TGA-CCT-T-GA-CA--T---TG----TT-TGA---C-A-G-T---TG-CGAA--TTC--T------A-
gi|129260 : CCA-C-A-T-CG-C-TCACC-T-GAG-T-GG-CCT-TG--------------------G----CT-CAG---C-A-G-T---AG-TG-A--TTT--T------A-A--T--AAG-A-ATTTT
gi|129261 : CCA-C-A-T-CG-C-TCACC-C-GAG-T-GA-TCT-TCG-CC-------C---A---TG----TT-CAA---C-A--------G-TG-A--TTT--TA-----A-A--A--AAG-A-ATTTT
gi|129262 : CCA-C-A-T-GG-C-TCACC-T-GAG-T-GA-CCT-TGG-CAC-T-G-----------G----TT-CAA---C-A-G-T---GG-CG-A--CTT--C------A-A--A--ATG-A-ATTTT
gi|129263 : CCA-C-A-T-CG-T-TCACC-T-GAG-T-GA-CCTATGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-AG-A--TTT--T------A-A--A--
gi|129303 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CCT-TGG-CCC-T-G-----------G----CT-CAG---C-A-G-T---GG-TG-A---TT--T------A-G--A--AAG-A-ATTg
gi|129304 : CA-C-A-C-CA-C-TCACC---GAA-T-GA-CCT-TGG-CCC-T-A------T---CA----TT-CAG---C-A-G-T---TG-TG-A--TTT--C------T-A--T--AAG-A-AT
gi|129305 : CA-C-A-T-TG-T-TCACC-T-GAG-T-GA-TCT-GGG-CTC-T-G--CCG-T---TG----TT-TAG---C-A-A-T---GG-TG-A--TTT--T------
gi|129306 : CA-C-A-T-TG-C-TTACC-T-GAG-T-GA-CCT-TAG-CCC-T-G-----------G----AT-CAG---C-A-G-T---GG-TG-A--TTT--T------A-A--A--AAG-A-ATTt
gi|129307 : CA-C-A-T-CA-C-TCACA-C-GAG-T-GA-CCC-TGG-CAC-T-G--CCA-T---TT----TT-CAG---C-A-G-TG--GG-TG-T--TTT--T------T-A--G--AAG-
gi|129308 : CA-C-G-T-TG-C-TTACC-T-GAG-T-AA-CCT-TGA-TAC-T-G--TTG-T---TG----TT-CTG---C-A-A-T---TG-TG-A--TTT--T------G-A--A--ACG-A-ATTT
gi|129309 : CA-C-A-T-CG-C-TCACC-T-GAG-T-GA-CC--TGG-CCC-T-G-----------G----CT-TAG---C-A-G-T---GG-TG-A--TTT--A------G-A--A--AAGAA-ATTTT
gi|129315 : A-C-A-T-CG-C-TCACC-T-GAA-T-GG-CCT-TTG-TCC-T-G--CCG-T---TG----TT-TAG---T-A-G-T---TG-TA-A--TTT--C------T-A--A--AAG-A-ATTTT
gi|129316 : A-C-A-T-CG-T-TCACT-T-GAA-T-CA-ACT-TGG-CCC-T-A--CCA-T---TG----TT-CAG---A-T-G-T---TG-CG-A--TTT--T------T-A--A--AAG----TTTT
gi|129317 : A-C-A-T-CA-TGTCACC-T-GAG-T-GT-ACT-TGG-CCC-T-G--CTG-T---TG----TT-CAG---A-A-G-T---TG-TGAA--TTT--T------
gi|129322 : -C-A-T-CG-C-TCATC-T-GAG-T-GG-CCT-TGG-CCC-T-AACC---T---TG----TT-CAG---A-A-G-T---TA-TG-A--TTA--T------T-A--A--AAG-A-ATTT
gi|129323 : -C-A-TGCG-C-TCACC-G-GAG-T-GA-CCT-TGG-CCC-T-G--C-------CG----TT---------A-G-T---TG-TG-A--CTT--T------T-A--A--AAG-A-ATTTT
gi|129330 : -TCACC-T-GAG-T-GA-TCT-TGG-CCT-TGG--CTA-T---TG----AT-GCG---C-A-G-T---CG-TG-ATTTTT--T------A-A--G--AAG-A-ATTTT
gi|129334 : T-TGG-CCC-T-G--CCG-T---TG----TT-CAG---T-A-G-T---AG-TG-A--TTT--T------T-A--A--AAG-A-TTTTT