lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111 11111111111111111111 1111111111111111111111111111111111111111111111111111111 11111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222 222222222222222222222222222222222222222222222222222222222222222222222222222222 111111111111111111111111111111111111111
lowQualScore : 11 111 1 5555555555555555555555555555555555555555555555555555555555555555555555555 111 2222 1111111111 666666666666666666 22222 00000000000000000000000000000000000000000000 1111111 11 222222222 1111111 1 22222222 11 111 11111 11111 111 99999999999999999999 11111 2 2 1 1 666666666666666 1111111 1111111 555555555555555555555 11111 1 0000000000000000000000000000000000000000000000000000000 11111111 22222222222222 1111 55555555555555555555555555 11111111 1111 999999999999999999999999999999999999999999999999999999999999999 11111 1 66666666666666666666666666666666 1 55555555555555 11111 111111 77777777777777777777777777777777777777777777777777777 3333333333333 111 11111 111 55555555555555555555555555555555555555555555555555555555555555 111 11 111 11 1 5555 1 333333 1 222222222 1 666666666666 11 1 66666 1 1 11 11 1 2 3333333333333 11 111 333333333333333333333333333333333333333333333333333333333333333333333333333333 2 222222 1 1 1111 11 22 000000000000000000000000000000000000000 11 1 2 111 2222
lowQualScore : 33 111 5 8 3333333333333333333333333333333333333333333333333333333333333333333333333 111 3333 5555555555 6 99 6 6 333333333333333333 66666 6 99 6 99 66666666666666666666666666666666666666666666 6 3333333 99 88 666666666 4444444 6 6 8 3 7 00000000 77 99 88 66 444 44444 55555 5 111 44444444444444444444 8 0 00000 1 1 4 6 0 8 8 6 77 2 7 5 5 333333333333333 5 77 5 77 6666666 77 1 77 8888888 333333333333333333333 4 44444 4 1 5 1 5555555555555555555555555555555555555555555555555555555 77 2 77 5 5 8 99999999 66666666666666 8888 5 77 66666666666666666666666666 4 88 77 4 6 6 88888888 99 4444 666666666666666666666666666666666666666666666666666666666666666 77777 3 99 6 6 6 0 44 2 33333333333333333333333333333333 0 8888 0 8 66666666666666 3 4 44 3 3 00000 3 3 6 6 555 3 3 3 44 3 44 000000 22222222222222222222222222222222222222222222222222222 5555555555555 111 3 3 88888 444 88888888888888888888888888888888888888888888888888888888888888 666 3 33 777 22 0 3 33 3 4444 0 2 222222 2 0 333333333 3 888888888888 8 44 6 2 00000 7 3 44 88 0 0 2 2 7777777777777 4 88 555 555555555555555555555555555555555555555555555555555555555555555555555555555555 0 0 333333 7 0 4444 33 44 2 444444444444444444444444444444444444444 2 44 8 9 6 88 8 0 1 777 3 1111
lowQualScore : .. ... . . ......................................................................... ... .... .......... . .. . . .................. ..... . .. . .. ............................................ . ....... .. .. ......... ....... . . . . . ........ .. .. .. .. ... ..... ..... . ... .................... . . ..... . . . . . . . . .. . . . . ............... . .. . .. ....... .. . .. ....... ..................... . ..... . . . . ....................................................... .. . .. . . . ........ .............. .... . .. .......................... . .. .. . . . ........ .. .... ............................................................... ..... . .. . . . . .. . ................................ . .... . . .............. . . .. . . ..... . . . . ... . . . .. . .. ...... ..................................................... ............. ... . . ..... ... .............................................................. ... . .. ... .. . . .. . .... . . ...... . . ......... . ............ . .. . . ..... . . .. .. . . . . ............. . .. ... .............................................................................. . . ...... . . .... .. .. . ....................................... . .. . . . .. . . . ... . ....
lowQualScore : 88 000 0 0 5555555555555555555555555555555555555555555555555555555555555555555555555 777 8888 8888888888 7 22 7 7 333333333333333333 88888 7 22 7 22 00000000000000000000000000000000000000000000 7 3333333 22 33 777777777 3333333 7 7 3 3 8 77777777 99 22 33 22 333 00000 11111 7 777 66666666666666666666 0 8 88888 0 0 0 0 0 0 0 0 99 0 9 7 0 000000000000000 7 99 7 99 7777777 99 4 99 6666666 000000000000000000000 3 33333 9 4 0 7 7777777777777777777777777777777777777777777777777777777 99 7 99 7 7 6 33333333 44444444444444 3333 7 66 33333333333333333333333333 0 00 99 7 7 7 33333333 22 2222 444444444444444444444444444444444444444444444444444444444444444 66666 0 22 3 7 7 0 00 5 88888888888888888888888888888888 0 4444 6 0 44444444444444 9 0 66 3 3 88888 1 1 2 2 444 1 1 1 22 3 66 555555 66666666666666666666666666666666666666666666666666666 8888888888888 555 2 2 55555 000 00000000000000000000000000000000000000000000000000000000000000 222 2 88 000 55 0 2 22 2 8888 0 5 000000 0 0 111111111 3 333333333333 3 00 7 3 33333 0 3 00 22 2 0 8 5 0000000000000 0 33 333 777777777777777777777777777777777777777777777777777777777777777777777777777777 0 6 000000 0 0 2222 88 88 5 222222222222222222222222222222222222222 5 22 0 0 0 88 0 0 2 555 2 2222
consensus : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAAC-G--TAAAT---G--G-GGAAATTA-AC--C-A-AT------------------TGATAGAAAA----TT-C--G-CTTCG--CTAT-------------------------GAAGGA-NT---G-----CT-ATT---C---GG--ACAAATG--TC---------AGA-C-T---CA-T-TTACACAATAA-AAGGACTTCC--------GGTTACT--AAAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAG-C-AGAT---A-A-A--TTA------ATAAAA-CTAATGAAACAAAAAGCAACTACTAATTCTAG-T-TAAAGT--GCACAAATACT-AAGTGATG-AA-NTAA-TA---GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA-------AG------------ACAAAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAAA-AT-CGCATAT-T--ATCGAA-CGT--AAAA--TAATATA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GGA-TTTAGTTACG--ACAA-TGAAAACCGA--TCAACATGG-----A---------TAGCGT-TA--TCTAG-AAATTGTAATT-TT-----GNCGCTTT--ACA----AAGAAACTATAATATT----GT-----------------ACATACAAAATAAA--AT---GATTA-----CG-TTCCTA---TGCA--ATAAATCGC-A-AAACGGAAAAACATG-AATATAAAGAG--CGT----ANTGGAAA-ATTN---A-----TACTA-AAAAGTGAATAAG-TAAAA-ATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG------ACT-NCA-TTCT---------------TGACCT------------TGAC-------TTCAAGCT-A-GC------GTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TA------------AT--T-----GTGCGAAA-AGGGG-----NA---CTATTATTG--TAATTGAAATT--AAA--ACAACAC-AATTTA-CTGTGGGAAATTACT---TATA-ACGCGGA-CA-GACAGGTAAA-TGAC---ATATG-GGGAAATTA-AG------------TTATT-TAACAAATTACACTAA--A-GATGTCGG-CTTC-NTTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---ANAC--AAAACG-CCAAAAAAA------GGGG-GC-AGAN-----TACTCG-----ACAA-A------------------G---TNCGATATAAATTATGTACGGAGAAA------CATCCTTTAAGT-AAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGT--TGTTA-AGTTTCTA----TT--TATCT-ANA------ANCTTACGAAA-TTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( gi|2 ) : GCATTACA--GGCAGGCAG-T-GAGTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAAC-T--TAAAT---G--G-GTAAATTA-AC--C-A-AT------------------TGATAGAAAA----AT-C--G-CTTTG--CTAT-------------------------TAAGGA-AG---G-----CT-ATT---C---GG--ACAAATG--TC---------AGA-C-T---CA-T-TTACACTACAATAAGGACTTCC--------GGTTACT--AAAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAG-C-AGATCTAATAAA--TTAATAGTCATAAAA-CTAATAAAACAAAAAGCAAC-ACCAATTGTAG-T-TAAGGT--GCACAAATACT-AACTGAT-----TTA--TA---GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA------AAG------------ACAAAA-----ATGACAATGCAGACAATGGCTA-----------TCTACATTGACAAAT-AT-CGCATATATACATTGGA-CAT--ATAA--TAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GGA-TTTAGTTATG--ACAA-TGAAAACCGA--T-------------A---------TAGCGT-TA--TATAG-AAATTGTAATT-TT-----GCTGCTTT--ACA----AAGAAACTATAACATT----GTCA-------TT------ACATACAAAGTAAA--AT---GATT------C--TTCCCA---TGTA--ATAAATCGC-A-AAACAGAAAAACATG-AATATAAAGAGAGCGT----AGTGGAAA-ATTT---A-----TACTA-AAAAGTGAATAAG-TAAAA-ATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG------ACT-ACAATTCG---------------TGACTT------------TGA--------TTCAAGCT-A-GC------GTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTTGAGTTA------------ATTTT-----GTGCGAAA-AG--------C----CTATTATTG--TAATTGAAATT--AAA--ACAACAC-AATTTA-CTGTGGGAAATTACTGAGTATA-ACGCGGA-CA-GTCGGGTAAA-TGAC---ATAAG-GGGAAATTA-AG------------TTTTC-TAACAAATTATACTAATTA-AATGACGG-CTTC-ATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACG-CCAAAA---------GGGG-AC-AGAT-----TACTCG-----ACAA-A------------------G---TCC----------ATG-ACAAAGAAA------CATCCTATAAGT-AAACTAGTCT-T-TGTTCTC--AAAACTTCCAAATGT--T---------TCTA----TT--TATCT-ATT------ACCTTACGAAA-TTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAG
gi|4 : CATTACACAGGCAGGCAGGT-GATTAATAA------------TAA-------ATGAATTAATCTTGATGACGA-GT------------------GGTGT---GGGA---TTTTACA-A--TAAAT---G--GCGGAAATTA-AC--CCA-AG------------------TGATAGAAAA----TTTC--G-CTTTGGCCTAT-------------------------GAAGGA-TT---G------T-ATT---C---AG--ACAA-TGAGTC---------AGAAC-T---AAGT-TTACCATACACTAA---CTTCC--------GGTTACT--AAAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAA-C-AGAT-------A--TTA-------TAAAA-CTAATGAAACAAAAAGCAACTACTAATTCTAG-T-TAAAGT--GCACAAATACT-AAGTGAT-----ATAA-TA---GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------ACA------TAG------------AGAAAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAAA-AT-CGCAT------ATTGAA-CGT--AAAA--TGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GGA-TTTAGTTA
gi|3 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGAATAATCTTGATACGAGTGGT------------------GG------GGAA---TTTTGAC-A--TAAAA---G--G-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAA----TT-C--G-CTTTG--CTATGAAGGATGTTCTCGCTTGTATGGCATAATGA-AGATGG-----CTTATT---C---GG--AAAAATG--TC---------AGA---T---CA-TGTTACACAGTAA-GAGGA-TTCC--------GGTT--T--AA-G--AAAGGGGGGT------TAAG-AA--GAGA----CTAACACTAG---AGAT--------------------TAAAATCTAATGAA-TAAAAAGCAACTACTAATC-TAGATATAAAGT--GCACAT-TACT-AAGTGAT-----ATA--AT---GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------ACA------AAT------------A-GAAA-----ATGGC--TACAGAAAATGG-TA-----------TCTTAATTTACAAAA-AT--GCATAT------CGAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GGT-TTTGGTCG------AA-TGAAG--CGA--TTTACATTGGGGAAA---------TAGGGT--A--TCTAG-AAATTGTAGTTATT-----GC-GCTTC--A-------AGAAAATATAATACTACAAGTTAAAATGATTTGAACGAATATCTAAATTAGA--GTTTAGATTATAATACG-TTCCTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATATAAAGA---CGTTGACAGTGGAAATATATGGAA-----TACTA-AAAAGTG--TAAG-TAAAA---GAATAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-GA-A----T-GT-A-AA--c
gi|6 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------ATAATCTTGATACGAGTGATGG------GGAA---TTTTAAT-G--TAAAT---G--G-GGAAATTA-AC--C-A-AT------------------TGATAGAAAA----TT-C--G-CTTTG--CTAT-------------------------GAAAGA-TT---G-----CT-ATT---C---GG--ACAAATG--TC---------AGA-C-T---CC-T-TAACACAATAG-AAGGACTTCC--------GGTTACT--AAAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACggacttgttgttaacttgacgtcaggagaaaactgacc
gi|1 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAATATAATCTGATTACGA------------------GT------------------GGTTGGGGGGAGATTTTTTGACATAATAAATTGTG--G-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATTTTAT-CCTGTCTTCG--TTATGCGGC--------------------TAATGATAG---GAATTTCT-ATTAAAC---GGTCACAAATG--TC---------AGA-C-TGCCTA-T-TTACACAATAAGAAGGACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGC-A--GAGAACTTTTA-CACTAGCC-AGATATGATAAAACTTA------ATGAAA-C-AA-AAAGCAATAAACCAT-ACTAATTCTTG-T-TAAAGTTAGCACAAATAATAAAGTGAA-----ATA--TAAC-GTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAACATACACTAAGAAGAAGAGCACAACAGAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCA-ATAT---TCGAACCGTTAAAAA--TAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGGATTTTAGTTACG--ACAACTGAAAGCCAAACTTTAACAAATGGA-A---------TAGCGTATA--TCTAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAAGTAT---ATT----AT--------------------TACAAGATAAA--A
gi|23 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaTA-TA-------------CAA-------ATGA------------------TT------------------GG------GAAG---TTCACAT-T--AAAAT---GATG-GAAAAT-A-AT--T-A-TT------------------TAATACAAAA----TT-C--G-CTTCT--CTAT--------------------------GAGGA-A----------TT-ATT---CTTTGG--ACAAATGATTCTTTATTTTAAAA-CAT---CA-T-TTGCAATATCACTGGGACTTCC--------GGTTAAT--GAAaatctagaaatttgaatatcaacatcatttcgcattat
gi|9 : ------------------GT------------------GG------GGAA---TTTTAAC-A--TAAAC---G--G-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAA----TT-C--G-CTTTG--TTAT-------------------------GAAGGA-TT---G-----CT-ATT---C---GG--ACAAACG--TC---------AGA-C-T---CA-T-GTACACAATAAGAAGGACTTCC--------GGTTACT--AAAG--AAA--GGGGGGAGGGGTAAG-----------------CACCAG-C-AGAT---ATA-------------ATAAAA-CTAAT-----------CTAC-TATAATTCTAG-T-TAAAGT--GCACAAATACT-AAGTGATA----TAA--TA---GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC--------AG------------ACAAAA-----ATTACAATACAGAAAATGGCTA-----------TCTACATTTACAAAA-AG-CGCAT------ATTGGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GAA-TTTAGTTATG--ACAA-TGAAAACCGA--TAAACATGGA----A---------TAGCGT-TATCTATAG-AAATTGTAATT-CT-----GCCGCTTT--ACA----AAGAAACTATAA
gi|29 : aatcttgatacgagcgACTTCC--------GGTTACC--AAAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAG-CGAAATTTAA-AAA--t
gi|10 : AGA----CTA-CACTAG-C-AGAT-------------ATA---ATAAAA-CTAATGAAACAAAAAGCAACTACTAATTCTAG-T-AAAAGT--GCACAAATACT-AAGTGATATAA-TTA--TAATAGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------ACA------TAG------------AGAAAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAAA-AT-CGCAT------ATCGAA-CGT--AAAA--TAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GGA-TTTAGTTACG--ACAA-AGAAAG-CGA--A-------------C---------TAGC-T-CA--TAgaaat
gi|16 : GT--GTACAA-TA-T-AAAAGATGAAAGTTAATTA---GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------ACA--------G------------ACAAAA-----ATAACCATGAAGAAAATAGTTA-----------------------AA--AT-TGCATAT-TGT-TTG-----T--AAAA--TAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC------TG------TTTCATTATACAACAA-TGGAAATCGA--TCAGCATGG-----AC--------TAGCAT-TA--TCCAG-AAATGGTAATT-TT-----GACACTTT--ACA----AAGAAACTacagtgtttctcggaaaacgggagatcattttgaatccatttta
gi|13 : GT--GTACAA-TA-T-AAAAGATGAAAGTTAATTA---GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------ACA--------G------------ACAAAA-----ATAACCATGAAGAAAATAGTTA-----------------------AA--AT-TGCATAT-TGT-TTG-----T--AAAA--TAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGT-TTCATTTATACAACAA-TGGAAATCGA--TCAGCATGG-----AC--------TAGCAT-TA--TCCAG-AAATGGTAATT-TT-----GACACTTT--ACA----AAGAAACTGAAATATgaaata
gi|24 : TTACG--ACAA-AGAAAACCGA--T-------------AAACATGGAATAGCAT-CA--TATAA-AAATTAAAATT-GT-----GACACTTT--ACA----AAGAAGCTGTA----------------------------ACATACAAAGTAAATTAT----ATT------TGATT-------TGTAGTATAAA--GC-A-AAacaatgaaggcaaaatatgtttgatttgtcgtagaaagatatggaat
gi|15 : AAATAAA--AC---G------------TTCCTA---TGCA--ATAATTTAC-A-AAACGGAAAAGTATG-AATA---------CGT----AATG------TTT---ACAGCGTACTGGAAAAGTGAATAAG-TAAA------GT-----TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-GA-AT---T-AT-A-AA--TT-CG--TG------ACT-----TTCT---------------TG--CT------------TGA--------Tggaattttaagataaa
gi|28 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagAAA--AT---AATTA-----CG-TTCCTA---TGCA--ATAGATTGT-A-AAACAGAAAAAgtccaggagaaaagtgaccggacaa
gi|7 : gtacgaattgatctaaattctttcagtttagCCTA---TGCA--ATAAATCGC-A-AAATCGAAAAACATG-AATATAAAGAG--CGT----ACTGGAAA-ATTG---A-----TACTA-AAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-AA-AT---T-GT-A-AA--TT-CG--TG------AGTGACT-TTCT---------------TG--CT------------TGACG------TCCATGC--A-GGAGAAAAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGATGTAAGCTTAAGGTGCGACAAGAAACTATTTTAAAAGGTGCGAAA-AGGGGCTGAACATTGTTATCATTG--CAATCGACATTTTAAG--ACAGCAC-AATTTA-CTATGGGGGTTTCTTTA-TATA-ACGCGGAGAA-AAAGGGCAAA-TGACTTAATATG-GGGAAATTA-AGTTTTTTGTTGTTTTTTT-TAACAAAGTACTCTAAT---GATGTCGG-CTTC-TTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-tctaagcttacgt
gi|21 : taaaaagtaaagtgactttgtaattagactatctaaaactctaaaatttagaaattaaatgttcagga--ATAACTGAC-A-AAATAGATCGACATG-AATATGAATAGAACCT--------GAAA-ATTG---A-----TGCCA-AAAAG-----------GAA-AT---TAATATTTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-GATATCAGT-GT-A-AT--TT-CA--GG------ACT-ctc
gi|5 : TAAATAAGGTAAAA-ATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTGA-AT---TTGT-A-AAATTT-CGAGTGGACTTTATT-AC--TTCGACGCCAGGAGAAAACTGACCG------------TGACAA-----TTCAAGTTTACGC------GTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA-------TTG---TA------------A--AT-----GTGCGAAA-AGAGAA----G----CTATTATT---TAA-TGAAATT--AAAAGACAACACAAATTTAGCTG-GGGAAA-GACT---TATA-ACGCGGA-C--GACAGGTAAATTGAC----TATGTGGGGAATTA-AG------------TTATCTTAACAAATTATACTAA--A-GATGTCGG-CTTT-ATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCCCAAAAAGG------GGGG-AC-AGAC-----TACTCG-----ACAA-AGTATTATTAACACATATTG---TCC----------ATG-ACAAAAAAA------TAttaaatattacttgacgtcaagagacaaaatatcctaaaaattcga
gi|6 : acagaAAAA--TCTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-GA-AT---T-GT-A-AA--TT-CG--T-------ACT-TTAATTaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|17 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagTTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAGA-AT---T-GT-AGAA--TTACG--TG------ACT-acttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|4 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaATCTG-AAATTTCA-G-GACAG-----A-AGAACG-GAGAT---T-GTAA-AA--TT-CG--Tttattactgacgtccagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|3 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaATCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG------ACT-cgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|27 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-GA-AT---T-GT-A-AA--TT-CG--TT------ACT-ttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|20 : tttgttgtgatatcgtaatgtggaAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG------ACT-ttattacttgacgtccaggagaaaa
gi|19 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcAAT--CA-G--ACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG------ACT-ttattgcttgacgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|12 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcG-----G-AG-CCG-GA-AT---T-GT-C-GA--TT-CG--TG------ACT-TTATTACT---------------TGACGTCCAGGAGAAAACTGACCGGACAATTCAAGCT-A-GC------GTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA--------TG---TA------------AT--------GTGCGAAA-AG--------AAA--CTATTATTG--TAATTGAAATT--AAA--ACAACAC-AATTTG-CCGTGGGAAATTAC---GTATA-ACGCGGA-CA-GACAGGTAAA-TGAC---ATAttattgcttgacgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|8 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttgtaaaatctgcgatctggcgcA--------TTCAAG-T-A-GC------GTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA--------TG---TA----------------T-----GTGCGAAAGAG--------------TATTATTGGTTAATTGAAATT--AAA---CAACA--GTTTTA-CTGTGG--AATTACT---TATATACG-GGA-TATATCAGGTAAA-TGAC---ATATG-CGGAAATTACAG------------TTATT-TAA-AAATTA-ACTAA--AGAATGTCGGACTTT-TTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-G-CCAGAAAAAAAGGGGGGGG-GCGAGCA-----TACTCG-----ACAAGA------------------G---T
gi|11 : acaTTCTATTGATTTTTAAGGACACTGAATTTATT-TCTCATATTGT-----CATTTTACACGAAAAATG-CCAAAAAAA------GGGGCGC-AGATTAGCGTAATTGTCCATACAA-A------------------GAAATACGATATAAATTATGTACGGAGGAATGTGAACATCCTTTAAAT-AAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGT--T---------GTTAGAGTTT--TATTC-AT--------CTTTTTAAAACTTAAGTAGAAATTTGGACAACAT--TAG-Aaattattaacaatatgtcagacaaatataatgtaggaaggaatagcgaccagcatcctttaaattaaactagtcttgttctcaaaatcaatgttgttacatttgtatttcattctaaagactttgaaattggtgggaacggaaaaataatagaatattgtcaaatttttaaaattaagaaattgta
gi|5 : ggaaattgaggatgttatgtcataacatattatcaaggatggttggattgGACA------CATCCTTTAAGT-AAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGT--TGTTACAGTTTCTA----TT--CATCT-AAA------AACTCACGAAA-TTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAgatg
gi|18 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcGACA------CATCCTTTAAGT-AAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGT--TGTTAAAGTTTCTA----TT--TATCT-AAA------AACTTACGAAA-TTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAatggtgaatgtgcatatatga
gi|8 : tatgtccatgataaaaaaaaaaaaaaaaagagtataaaatgtAG------CATCCTTTAAATTAAACTAGTCT-T--GTTCTC--AAAA--TC--AATGTTGT---------TACA----TTTGTATTTCATTCTAAAGACTTT--GAAA-TTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTatggtgatagtgcatatatgata
gi|25 : acaattcaagtagcgtctacctgtttgtcatgtgagtatcttgtcgatgtatgtgcgaaagagtattattggttaattgaaattaaacaacagttttactgtggaattacttatatacgggatatatcaggtaaatgacatatgcggaaattacagttatttaaaaattaactaaagaatgtcggactttttcgatttgaaggacactgattgattttctagatttcagagcagaagcaaaagccagaaaaaaagggggggggcgagcatactcgacaagagtaattattaacaatatgtcagacaaatataatgtaggaaggaatagcgaccCTTA-AAAA-TTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAa
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC
Unaligned ( gi|26 ): CAGACTACTCGGCAAAGTATATCAACAAGTATGATATAAAATATATAATAAAATAATATGTACGGGGGAATATAGCAGATCCTTTAAGTATACTAGTTT
Unaligned ( gi|30 ): TGATTGCTTACATTAACAGACCCATCACATGGCTTTTTTACACATTCAGAGAGATTTCCGGTTAATGA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 111111 3333333333333333333333333333333333333333333333333333333333333 111 111111 1 555555555555555555 111111 5555555555555555555555555555555555555555555555555 111 222222222 111 111 222222 11111111 11 111 1111 55555555555555555555 111111 555555555 1111 1111111 1111111 55555555555555555555555 11111 222222222222 33333333333 11111111 222222222222222222 111 111 2222 11 1111 1111 999999999999999999999999999999 111 22222222222222 111 11 33333333 222222 111111 22222 1111111111111 11111 444444444444444444444444444444444444444444444444 2222222 222222222222 111 9999999999999999999999999999999999999999999999999999999999999999999 111 22222222 111 222 222 555555555555 2222 11 11111 111111 22222 111 11 11 222222 222222 22222 0000000000000000000000000000000000000000000000000000000000000000000000000000 2222222 11 222 1 111 1111
lowQualScore : 11 8 8 6 999999 5555555555555555555555555555555555555555555555555555555555555 000 5 77 666666 1 5 77 5 5 444444444444444444 5 666666 5 8888888888888888888888888888888888888888888888888 1 1 5 000 77 77 0 77 222222222 888 000 5 5 000 555555 88888888 66 77 99 4 222 0000 5 5 55555555555555555555 5 6 1 3 999999 6 6 66 9 5 33 111111111 0 4444 5 66 5 66 3333333 66 66 6666666 33333333333333333333333 5 22222 3 0 777777777777 0 5 55 5 44444444444 77777 66 5 5 55555555 111111111111111111 4 5 0 000 8 77 000 7777 55 77 5 5 22 5 5 2222 2222 0 000000000000000000000000000000 444 0 77777777777777 1 6 111 77 4 5 4 8 8 11 33333333 3 111111 8 999999 6 22222 3 5555555555555 3 33 2 2 00000 2 2 5 5 555 2 2 2 33 2 33 2 000000000000000000000000000000000000000000000000 8888888 444444444444 8 0 0 444 8 88 8888888888888888888888888888888888888888888888888888888888888888888 444 0 99999999 111 8 8 0 5 0 888 8 0 8 8 8 222 0 8 888888888888 1 1111 55 11111 8 8 777777 8 8 0 8 55555 777 1 33 6 00 888888 999 8 1 666666 00000 6 4444444444444444444444444444444444444444444444444444444444444444444444444444 1111111 6 6 8 11 99 444 5 8 8 555 1 9 0 3 6 6 8 5 444 0 7777
lowQualScore : .. . . . ...... ............................................................. ... . .. ...... . . .. . . .................. . ...... . ................................................. . . . ... .. .. . .. ......... ... ... . . ... ...... ........ .. .. .. . ... .... . . .................... . . . . ...... . . .. . . .. ......... . .... . .. . .. ....... .. .. ....... ....................... . ..... . . ............ . . .. . ........... ..... .. . . ........ .................. . . . ... . .. ... .... .. .. . . .. . . .... .... . .............................. ... . .............. . . ... .. . . . . . .. ........ . ...... . ...... . ..... . ............. . .. . . ..... . . . . ... . . . .. . .. . ................................................ ....... ............ . . . ... . .. ................................................................... ... . ........ ... . . . . . ... . . . . . ... . . ............ . .... .. ..... . . ...... . . . . ..... ... . .. . .. ...... ... . . ...... ..... . ............................................................................ ....... . . . .. .. ... . . . ... . . . . . . . . ... . ....
lowQualScore : 00 0 0 7 222222 2222222222222222222222222222222222222222222222222222222222222 000 0 99 444444 4 7 99 7 7 333333333333333333 7 444444 7 1111111111111111111111111111111111111111111111111 7 0 7 000 99 99 1 99 999999999 666 000 7 7 000 111111 11111111 99 99 44 3 999 6666 0 7 77777777777777777777 7 7 0 2 222222 7 7 99 4 6 99 444444444 4 0000 0 99 0 99 5555555 99 99 2222222 55555555555555555555555 0 55555 1 2 000000000000 2 0 22 0 44444444444 88888 99 0 0 66666666 555555555555555555 4 0 9 000 9 99 000 4444 99 99 7 7 33 7 7 1111 1111 4 444444444444444444444444444444 222 3 55555555555555 0 7 777 99 0 7 0 0 0 00 00000000 2 666666 0 444444 7 00000 2 1111111111111 3 99 9 9 00000 9 9 7 7 000 9 9 9 99 9 99 9 222222222222222222222222222222222222222222222222 1111111 000000000000 0 8 8 000 0 88 0000000000000000000000000000000000000000000000000000000000000000000 222 8 00000000 888 0 0 8 6 8 000 0 8 0 0 0 000 8 0 000000000000 4 0000 66 44444 0 0 666666 0 0 8 0 00000 555 0 88 5 00 888888 222 0 0 222222 00000 7 4444444444444444444444444444444444444444444444444444444444444444444444444444 7777777 7 7 0 00 66 666 0 0 0 666 0 3 5 5 7 7 0 6 000 8 0000
consensus : NCATTACA--GGCAGGCAG-T-GATTA-T------AATAAAT-------------GA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT-ATT---CGG--ACAA--ATG--TC---------AGA-C-T---CA-T-TTAC---ACAATAA-AA---GGACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AG-----ATA--TTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---TGTCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAAC--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAATA-----------------TTG-----AC--ATAC--AAAATAAAAT---GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--TAA-G---A--GAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-TT-ATTA--CTT------------------GACCT------------TGAC-------TTCAAGCT-A-G------CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCG---------------AAAAGG--------G-AGCT----ATTATTG--TAATTGAAA--------TTAAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---TATA-ACGCGGACAGA-CA-GGTAAAT-GACT--ATATGGGGAAATTA-AG--T---------TTAT-T--TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCCAAAAAAA------GGGG-G-C-AGANTA-C----TCG-----ACAA-AG---T--------ACGATAT-------AAA-------------T--T-ATGTACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TCTAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( family-7825 ) : NCATTACA--GGCAGGCAG-T-GATTA-T------AATAAAT-------------GA------------------GT------------------GG------GGAA---TTTTAACGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGANTGCT-ATT---CGG--ACAA--ATG--TC---------AGA-C-T---CA-T-TTAC---ACAATAA-AA---GGACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AG-----ATAAATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--N--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---TATCGAA-CGT--A--AAATAATATA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TCAAC--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-NC-GCT-TT----ACA----AAGAAACTATAATA-----------------TTG----TAC--ATAC--AAAATAAAAT---GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--TAA-----A--GAGCGT----ANTGGAAA-AT-TN--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-NC-ATT---CTT------------------GACCT------------TGAC-------TTCAAGCT-A-G------CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCG---------------AAAAGG--------GGNACT----ATTATTG--TAATTGAAA--------TTAAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---TATA-ACGCGGACAGA-CA-GGTAAAT-GAC---ATATGGGGAAATTA-AG------------TTAT-T--TAACAAATTACACTAA--AG-ATG-TCGG-CTT----CNTTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---ANAC--AAAACGCCAAAAAAA------GGGG-G-C-AGANTA-C----TCG-----ACAA-AG---T--------NCGATAT-------AAA-------------T--T-ATGTACGGAG------AAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TCTANAANCTTACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
gi|1 : ACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAATATAATCTGATTACGA------------------GT------------------GGTTGGGGGGAGATTTTTTGACAT--AATAAATTGTGG-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATT-TTATCCTGTCTT------------------CG--TT-----------ATGCGGCTAATGATAGGAATTTCT-ATTAAACGGTCACAA--ATG--TC---------AGA-C-TGCCTA-T-TTAC---ACAATAAGAA---GGACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGCA---GAGAACTTTTA-CACTAGCCAG-----ATA---TG------ATAAAA-CTTAATGAAACAAAAAGCAATAAACCATACTAATTCTTG-T-TAAAGTTAGCACAAATAATAA--AGTG-AA--A--T-AT-AACGTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAACATACACTA-AGAAGAAGAGCACAACA-GAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCAATAT-----TCGAACCGTTAA--AAATAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGG----ATTTTAGT-TACGACAACTGAAAGCCAAACTTTAACAAAT---GGAA--TAGCGTATATC--TAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAAGTATATTA-----------------T------------TAC--AAGATAAAA
gi|10 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaAGA----CTA-CACTAGC-AG-----ATA---TA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-AAAAGT--GCACAAATACTAAGTGATATAATTA--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-A------TATCGAA-CGT--A--AAATAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GG----A-TTTAGT-TACGACAA-AGAAAGCaatctagaaatttgaatatcaacatcatttcgcattat
gi|11 : GGAAATTG-AGGATG--------TTATGTCATAACATATTAT--CAA--GG-ATGGTTGG-ATTGTTCTATTGATTTTTAAGGACACTGAATTTATTT-CTCATATTGT-----CATTTTACACGAAAAATGCCAAAAAAA------GGGGCG-C-AGATTAGCGTAATTGTCCATACAA-AGAAAT--------ACGATAT-------AAA-------------T--T-ATGTACGGAGGAATGTGAA----------CAT-------CCTTTAAA-TAAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGTTGTTAGA-GTTT-TATTC-A-TCT----TTTTA-AAACTTAAGTAGAAATTTGGACAACAT--TAG-Agaactagctcataacagtgtttctcggaaaacgggagatcattttgaatccatttta
gi|12 : GTAAAA-T-------CTG-CGAT--CT-G-GCGCG-----G-AG-CCG-GA-AT---T-GT-C-GA--TT-CG--TG-ACT-TT-ATTA--CTT------------------GACGTCCAGGAGAAAACTGACCGGACAATTCAAGCT-A-G------CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------T-G---TAA--T----GTGCG---------------AAAAGA----------AACT----ATTATTG--TAATTGAAA--------TTAAAA--CAACACAA-TTTG-CCGTGGGAAATTACG---TATA-ACGCGGACAGA-CA-GGTAAAT-GAC---ATAgatg
gi|13 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGC-ATAT---TGTT----TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGTTTCA-TTTA---TACAACAA-TGGAAATCGA---TCAGC--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAATA-----------------T
gi|15 : AAATAAAA--------------CGTTC-CTA---TGCA--ATAATTTACAA-AACGGAAAAGT-ATG-AATACGTAATGTTTA--CAGCGT----ACTGGAAA-A----------------GTGAATAAG-TA------AAGT-----TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-GA-AT---T-AT-A-AA--TT-CG--TG-ACT-----TT---CTT------------------G--CT------------TGAT-------GTCCAGacaatgaaggcaaaatatgtttgatttgtcgtagaaagatatggaat
gi|16 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGC-ATAT---TGTT----TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TG----T-TTCATTATACAACAA-TGGAAATCGA---TCAGC--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAATA-----------------gagaaaagtgaccggacaa
gi|17 : TTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAGA-AT---T-GT-AGAA--TTACG--TG-ACT-TT-ATT---ACT------------------GAC
gi|18 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaTAT-------AAA------------------ATGT-----G------ACA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-AAGTTTCTATTT-A-TCTAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAgtccagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|19 : tatgtccatgataaaaaaaaaaaaaaaaagagAAT--CA-G--ACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-TT-ATTG--CTT------------------GACatggtgatagtgcatatatgata
gi|2 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcCATTACA--GGCAGGCAG-T-GAGTA-T------AATAAAT-------------GA------------------GT------------------GG------GGAA---TTTTAACTT--AA------ATGG-GTAAATTA-AC--C-A-AT------------------TGATAGAAAAAT-C------G-CTT------------------TG--CT-----------ATT-----------AAGGAAGGCT-ATT---CGG--ACAA--ATG--TC---------AGA-C-T---CA-T-TTAC---ACTACAATAA---GGACTTCC--------GGTTACTA--AAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAGC-AGATCTAATAAATTAATAGTCATAAAA-CT-AATAAAACAAAAAGCAAC-------ACCAATTGTAG-T-TAAGGT--GCACAAATACTAACTGAT---------TTAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA------A-AG------------ACA-AAA-----ATGACAATGCAGACAATGGCTA-----------TCTACATTGACAAA-TAT-CGC-ATATATACATTGGA-CAT--A--TAATAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TATGACAA-TGAAAACCGA---T--------------A--TAGCGT-TATA--TAG-AAATTGTAATT-TTG-CT-GCT-TT----ACA----AAGAAACTATAACA-----------------TTGTCATTAC--ATAC--AAAGTAAAAT---GATT------C-TTC-CCA---TGTA--ATAAATCGCAA-AACAGAAAAAC-ATG-AATA--TAAAG---A--GAGCGT----AGTGGAAA-AT-TT--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-ACAATT---CGT------------------GACTT------------TGA--------TTCAAGCT-A-G------CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTTGAGTTAATTTT---GTGCG---------------AAAAG------------CCT----ATTATTG--TAATTGAAA--------TTAAAA--CAACACAA-TTTA-CTGTGGGAAATTACTGAGTATA-ACGCGGACAGT-CG-GGTAAAT-GAC---ATAAGGGGAAATTA-AG------------TTTT-C--TAACAAATTATACTAATTAA-ATG-ACGG-CTT----CATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACGCC---AAAA------GGGG-A-C-AGATTA-C----TCG-----ACAA-AG---T--------CC---------------------------------ATG-ACAAAG------AAA----------CAT-------CCTATAAG-TAAACTAGTCT-T-TGTTCTC--AAAACTTCCAAAT----------GTTTCTATTT-A-TCTATTACCTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|20 : gAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-TT-ATTG--CTT------------------GACg
gi|21 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagc--ATAACTGACAA-AATAGATCGAC-ATG-AATA--TGA-----ATAGAACCT--------GAAA-AT-TG--ATGCCAAAAAGGAAAT----TA-A---TA--T-----TTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-GATATCAGT-GT-A-AT--TT-CA--GG-ACT-TTAAAT---ATT------------------A--CT------------TGAC-------GTCAAGgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|23 : TA-T------A-CAAAT-------------GA------------------TT------------------GG------GAAG---TTC--ACATTAAA------ATGATGGAAAATA-AT--T-A-TT------------------TAATACAAAATT-C------G-CTT------------------CT--CT-----------ATG-----------AGGAATTATT-CTT---TGG--ACAA--ATGATTCTTTATTTTAAAA-CAT---CA-T-TT-----GCAATAT-CACTGGGACTTCC--------GGTTAATG--AAagacaaaatatcctaaaaattcga
gi|24 : T-TACGACAA-AGAAAACCGA---TAAAC--AT---GG-AA-TAGCAT-CATA--TAA-AAATTAAAATT-GTG-AC-ACT-TT----ACA----AAGAAGCTGTA----------------------------AC--ATAC--AAAGTAA-------ATTA-----TATTTGATT---TGTAGTATAAA--GCAA-A--GGAA
gi|25 : CTTA-AAAATTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAttttaagataaa
gi|26 : aG-G-C-AAAGTA-TA---TCA-----ACAA--G---T--------ATGATAT-------AAAATATATAATAAAATAAT-ATGTACGGGG------GAA----------TATAGCAGATCCTTTAAG-TATACTAGTTT-aagggtaatgtgcctaat
gi|27 : cagactactcATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-GA-AT---T-GT-A-AA--TT-CG--TT-ACT-TT-ATTA--CTT------------------GAC
gi|28 : tttgttgtgatatcgtaatgtggaAAAAT---AATTA-----CGTTC-CTA---TGCA--ATAGATTGTAA-AACAGAAAAAgtccaggagaaaa
gi|29 : gtacgaattgatctaaattctttcagtttagACTTCC--------GGTTACCA--AAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAGC-G--------AAATT--------TAAAA-tctaagcttacgt
gi|3 : GTAAAA-T-------CTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-CG--TG-ACT-TT-ATTA--CTT------------------GACagaaat
gi|3 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatCATTACA--GGCAGGCAG-T-GATTA-T------AATAAAT-------------GAATAATCTTGATACGAGTGGT------------------GG------GGAA---TTTTGACAT--AA------AAGG-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAATT-C------G-CTTTGCTATGAAGGATGTTCTCG--CTTGTATGGCATAATG-----------AAG-ATGGCTTATT---CGG--AAAA--ATG--TC---------AGA---T---CA-TGTTAC---ACAGTAA-GA---GGA-TTCC--------GGTT--TA--A-G--AAA------GGGGGGTTAAG-AA--GAGA----CTAACACTAG--AG-----AT-------------TAAAATCT-AATGAA-TAAAAAGCAAC------TACTAAT-CTAGATATAAAGT--GCACAT-TACTAAGTGAT------A--TAAT----GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------AC-------A-A-------------ATAGAAA-----ATGGC--TACAGAAAATGG-TA-----------TCTTAATTTACAAA-AAT--GC-ATAT------CGAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GG----T-TTTGGT---CGA--A-TGAAG--CGA---TTTAC--ATTGGGG-AAATAGGGT--ATC--TAG-AAATTGTAGTTATTG--C-GCT-TC----A-------AGAAAATATAATACTACAAGTTAAAATGATTTG----AACGAATATCTAAATTAGAGTTTAGATTATAATACGTTC-CTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATA--TAA-----A--GA-CGTTGACAGTGGAAATATATGGAATACTAAAAAGTG--TAAG-TA-AAA--GAATAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-GA-A----T-GT-A-AA------G---G-ACT-T--GTT---GTT------------------AA-CT------------TGAC-------GTCAGGgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|4 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaGTAAAA-T-------CTG-AAATTTCA-G-GACAG-----A-AGAACG-GAGAT---T-GTAA-AA--TT-CG--TC-GCT-TT-AGTATACTTG-----------------GACCT------------agaaaactgacc
gi|4 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttCATTACACAGGCAGGCAGGT-GATTAAT------AATAAAT-------------GAATTAATCTTGATGACGA-GT------------------GGTGT---GGGA---TTTTACAAT--AA------ATGGCGGAAATTA-AC--CCA-AG------------------TGATAGAAAATTTC------G-CTT------------------TGGCCT-----------ATG-----------AAGGATTG-T-ATT---CAG--ACAATGA-G--TC---------AGAAC-T---AAGT-TTACCATACACTAA---------CTTCC--------GGTTACTA--AAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAAC-AG-----ATA--TTA-------TAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---T---GAA-CGT--A--AAATGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|5 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaTAAATAAGGTA-AAAATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTGA-AT---TTGT-A-AAATTT-CGAGTGGACT-TT-ATTA--CTTCGACGCCAGGAGAAAACTGACCG------------TGACAA-----TTCAAGTTTACG------CGTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA-------TTG---TAA--AT---GTGCG---------------AAAAGA--------GAAGCT----ATTATT---TAAT-GAAA--------TTAAAAGACAACACAAATTTAGCTG-GGGAAAG-ACT---TATA-ACGCGGAC-GA-CA-GGTAAATTGACT--ATGTGGGGAA-TTA-AG------------TTATCT--TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCCCAAAAAG------GGGG-GAC-AGACTA-C----TCG-----ACAA-AG---T--------
gi|5 : acagaAA-AA---T--------AAAATAT-------AGA-------------A--T-ATGTAGGAAG------GAATGCGACA---CAT-------CCTTTAAG-TAAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGTTGTTACA-GTTTCTATTC-A-TCTAAAAACTCACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAattattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|6 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaAAAA-T-CTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-GA-AT---T-GT-A-AA--TT-CG--T--ACT-TT-Aatggtgaatgtgcatatatga
gi|6 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagCATTACA--GGCAGGCAG-T-GATTA-T------AATAAAT-------------GA------------------ATAATCTTGATACGAGTGATGG------GGAA---TTTTAATGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------TG--CT-----------ATG-----------AAAGATTGCT-ATT---CGG--ACAA--ATG--TC---------AGA-C-T---CC-T-TAAC---ACAATAG-AA---GGACTTCC--------GGTTACTA--AAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|7 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaAAACTCTAAAA-----------------TT-----------TA---GAAATTAAAT---GTTCA-----GGA-C-CTA---TGCA--ATAAATCGCAA-AATCGAAAAAC-ATG-AATA--TAA-----A--GAGCGT----ACTGGAAA-AT-TG--ATACTAAAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-AA-AT---T-GT-A-AA--TT-CG--TG-AGTGAC-TTT---CTT------------------G--CT------------TGACG------TCCATGC--A-GGAGAAAAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGA--------TG---TAAGCTTAAGGTGCGACAAGAAACTATTTTAAAAGGTGCGAAAAGGGGCTGAACATTGTTA--TCATTGCAATCGACATTTTAAGA--CAGCACAA-TTTA-CTATGGG-GGTTTCTTTATATA-ACGCGGAGAAA-AAGGGCAAAT-GACTTAATATGGGGAAATTA-AGTTTTTTGTTGTTTTTT-T--TAACAAAGTACTCTAA--TG-ATG-TCGG-CTT----CTTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-
gi|8 : taaaaagtaaagtgactttgtaattagactatcta-------TTCAAG-T-A-G------CGTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA-------T-G---TA----T---GTGCG---------------AAAGAG-------------T----ATTATTGGTTAATTGAAA--------TTAAA---CAACA-GT-TTTA-CTGTGG--AATTACT---TATATACG-GGATATATCA-GGTAAAT-GAC---ATATGCGGAAATTACAG------------TTAT-T--TAA-AAATTA-ACTAA--AGAATG-TCGGACTT----TTTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-GCCAGAAAAAAAGGGGGGGG-G-CGAGCATA-C----TCG-----ACAAGAG---TAATTATTAACAATATGTCAGACAAA-------------TA-TAATGTAGGAAG------GAATAGCGACCAGCAT-------CCTTTAAATTAAACTAGTC--T-TGTTCTC--AAAA--TC--AATGTTGTTA-C-ATTTGTATTTCATTCTAAAGACTT-TGAAATTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTctc
gi|9 : acaa------------------GT------------------GG------GGAA---TTTTAACAT--AA------ACGG-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAATT-C------G-CTT------------------TG--TT-----------ATG-----------AAGGATTGCT-ATT---CGG--ACAA--ACG--TC---------AGA-C-T---CA-T-GTAC---ACAATAAGAA---GGACTTCC--------GGTTACTA--AAG--AAA--GGGGGGAGGGGTAAGCA-----------------CCAGC-AG-----ATA---TA------ATAAAA-CT-AAT-----------CTAC------TA-TAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A--G------------ACA-AAA-----ATTACAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAG-CGC-ATAT---T---GGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GA----A-TTTAGT-TATGACAA-TGAAAACCGA---TAAAC--AT---GGAA--TAGCGT-TATCTATAG-AAATTGTAATT-CTG-CC-GCT-TT----ACA----AAGAAACTATAATa
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC
Unaligned ( gi|30 ): TGATTGCTTACATTAACAGACCCATCACATGGCTTTTTTACACATTCAGAGAGATTTCCGGTTAATGA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 333333333333 2222222 1111111111111111111111111111111111111111111111 111 111111 1 555555555555555555 111111 5555555555555555555555555555555555555555555555555 111 111 222222222 222222 11111111 11 111 1111 555555555555555555 111111 444444444 1111 1111111 1111111 55555555555555555555555 11111 222222222222 33333333333 11111111 222222222222222222 111111111 222222222 11111111111 777777777777777777777777777777777777777777777777777777777777777 111 1111 33333 222222 111111 22222 1111111111111 222222222222222222 55555555555555555555555 222222222 111 55555555555555555555555 444444444444444 11 11 111 1111111 333 666666666666666666666 11111 1111 22222 111 11 11 222222 111 1111 22222 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11 222 111 111 1111
lowQualScore : 11 8 8 6 444444444444 1111111 7777777777777777777777777777777777777777777777 000 77 666666 1 5 77 5 5 444444444444444444 5 666666 5 8888888888888888888888888888888888888888888888888 0 333 555 66 66 66 000000000 5 666 888 5 5 888 111111 5 66666666 66 77 99 4 222 0000 5 5 111111111111111111 5 6 1 3 999999 6 6 66 9 5 33 222222222 0 4444 5 66 5 66 3333333 66 66 6666666 33333333333333333333333 5 22222 3 0 777777777777 0 5 55 5 88888888888 77777 1 66 5 5 55555555 111111111111111111 4 5 0 111111111 66 666666666 5 66 5 5 88 5 5 11111111111 1 0 666666666666666666666666666666666666666666666666666666666666666 1 6 111 77 4 5 4 8 8 8888 77777 3 111111 8 555555 6 22222 3 5555555555555 3 33 2 2 99999 2 2 5 5555 5 777 2 2 2 33 5 5555 33 5 33 5555 333 2 2 222222222222222222 88888888888888888888888 000000000 8 0 0 444 8 88 99999999999999999999999 666666666666666 11 3 11 111 8 8 0 11 9999999 8 0 8 8 8 111 0 8 777777777777777777777 99 11111 8 8 7777 1 8 8 0 8 55555 777 0 33 6 00 888888 222 8 1 8 7777 00000 6 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 6 6 8 11 99 444 5 8 8 444 9 5 3 6 6 8 5 444 0 7777
lowQualScore : .. . . . ............ ....... .............................................. ... .. ...... . . .. . . .................. . ...... . ................................................. . ... ... .. .. .. ......... . ... ... . . ... ...... . ........ .. .. .. . ... .... . . .................. . . . . ...... . . .. . . .. ......... . .... . .. . .. ....... .. .. ....... ....................... . ..... . . ............ . . .. . ........... ..... . .. . . ........ .................. . . . ......... .. ......... . .. . . .. . . ........... . . ............................................................... . . ... .. . . . . . .... ..... . ...... . ...... . ..... . ............. . .. . . ..... . . . .... . ... . . . .. . .... .. . .. .... ... . . .................. ....................... ......... . . . ... . .. ....................... ............... .. . .. ... . . . .. ....... . . . . . ... . . ..................... .. ..... . . .... . . . . . ..... ... . .. . .. ...... ... . . . .... ..... . ............................................................................................. . . . .. .. ... . . . ... . . . . . . . ... . ....
lowQualScore : 00 0 0 7 222222222222 7777777 6666666666666666666666666666666666666666666666 000 99 444444 4 7 99 7 7 333333333333333333 7 444444 7 1111111111111111111111111111111111111111111111111 2 888 666 99 99 99 000000000 0 222 888 0 0 888 666666 0 11111111 99 99 44 3 999 6666 0 7 333333333333333333 7 7 0 2 222222 7 7 99 4 6 99 666666666 4 0000 0 99 0 99 5555555 99 99 2222222 55555555555555555555555 0 55555 1 2 000000000000 2 0 22 0 22222222222 88888 1 99 0 0 66666666 555555555555555555 4 0 9 222222222 99 111111111 0 99 0 0 11 0 0 88888888888 1 4 333333333333333333333333333333333333333333333333333333333333333 0 7 777 99 0 7 0 0 0 0000 00000 2 666666 0 666666 7 00000 2 1111111111111 3 99 9 7 33333 7 7 3 7777 3 333 7 7 7 77 3 7777 77 3 77 7777 888 7 7 333333333333333333 22222222222222222222222 000000000 0 8 8 000 0 88 77777777777777777777777 888888888888888 00 8 00 888 0 0 8 66 0000000 0 8 0 0 0 444 8 0 666666666666666666666 88 44444 0 0 0000 4 0 0 8 0 00000 555 8 88 5 00 888888 000 0 0 0 0000 00000 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 7 7 0 00 66 666 0 0 0 000 3 7 5 7 7 0 6 000 8 0000
consensus : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---T-TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAATAT----T------ACA---TACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCCAAAAAAA------GGGG-G-C-AGACTA-C----TCG-----ACAA-AG------------T--------ACGATAT-------AAAT--------------T-ATGT-ACGAAG------GAA----------C-------ATCCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( family-7825 ) : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---TGTCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAA--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAATAT----TG-----ACA---TACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCCAAAAAAA------GGGG-G-C-AGANTA-C----TCG-----ACAA-AG------------T--------ACGATAT-------AAAT--------------T-ATGT-ACGAAG------GAA----------C-------ATCCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
gi|1 : -GAGAG-----A-AG-ACC-GTGAAA-ATG--T-GT-A-AA--TTCC----G--TGAACT--T----T---T-T-ATT--------------------ACCT------------TAAC-------GTCGAG
gi|1 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggaACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAATATAATCTGATTACGA------------------GT------------------GGTTGGGGGGAGATTTTTTGACAT--AATAAATTGTGG-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATT-TTATCCTGTCTT------------------CG--TT-----------ATGCGGCTAATGATAGGAATTTCT---ATTAAACGGTCACAA--ATG--TC---------A-GA-C-TGCCTA-T-TTAC---ACAATAAGAA---G-GACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGCA---GAGAACTTTTA-CACTAGCCAGAT-------AT-G------ATAAAA-CTTAATGAAACAAAAAGCAATAAACCATACTAATTCTTG-T-TAAAGTTAGCACAAATAATAA--AGTG-AA--A--T-AT-AACGTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAACATACACTA-AGAAGAAGAGCACAACA-GAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCAATAT-----TCGAACCGTTAA--AAATAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGG----ATTTTAGT-TACGACAACTGAAAGCCAAACTTTAA--CAAAT---GGAA--TAGCGTATATC--TAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAAGTATATTAT-----------------TACAA-----------GATA---AAAgaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaacaggcaggcagtagattataaagcaaatgaatataatctgattacgagtggttggggggagattttttgacataataaattgtgggaaaattatacagcaatattggggattgtttgatttaataaaaaattttatcctgtcttcgttatgcggctaatgataggaatttctattaaacggtcacaaatgtcagactgcctatttacacaataagaaggactttccccctccgggttactagaaagaaaaaaaggttggggaagcagagaacttttacactagccagatatgataaaacttaatgaaacaaaaagcaataaaccatactaattcttgttaaagttagcacaaataataaagtgaaatataacgttacagtattggtccaaagatgaggggagaaagcgttggaacgttataaacatacactaagaagaagagcacaacagaagacggatggcaatactgaaaatggctacatggtaaatctctacatttaaaaataatgcgcaatattcgaaccgttaaaaataatatatttttgttaactataaaaacagctttttgcacggaggattttagttacgacaactgaaagccaaactttaacaaatggaatagcgtatatctagaaaattgtattttgcacagctgtttctaacacaataagaaagtatattattacaagataaaaaatctagaaatttgaatatcaacatcatttcgcattat
gi|10 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaAGA----CTA-CACTAGC-AGAT-------AT-A------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-AAAAGT--GCACAAATACTAAGTGATATAATTA--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATA------TCGAA-CGT--A--AAATAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GG----A-TTTAGT-TACGACAA-AGAAAGCGAA---CTAGCTC--AT----A-A--CAGTGT-T-TC--TCG-GAAaatctagaaatttgaatatcaacatcatttcgcattat
gi|11 : GGAAATTG-AGGATGTTATGTCA---------TAACATATTAT--CAA--GG-ATGGTTGG-ATTGTTCTATTGATTTTTAAGGACACTGAATTTATTT-CTCATATTGT-----CATTTTACACGAAAAATGCCAAAAAAA------GGGGCG-C-AGATTAGCGTAATTGTCCATACAA-AGAAA---------T--------ACGATAT-------AAAT--------------T-ATGT-ACGGAGGAATGTGAA----------C-------ATCCTTTAAA-TAAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGTTGTTAGA-GTTT-TATTC-A-TCTTTTTAAAACTTA--A------GTAGAAATTTGGACAACAT--TAG-Aaacgggagatcattttgaatccatttta
gi|12 : GTAAAA-T-------CTG-CGAT--CT-G-GCGCG-----G-AG-CCG-G----A-AT---T-GT-C-GA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACGTCCAGGAGAAAACTGACCGGACAATTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------T-G---TAA--T----GTGCGAAAAGAAA----------CTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTG-CCGTGGGAAATTACG---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGAC---ATAgatg
gi|13 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGC-ATAT---TGTT----TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGTTTCA-TTTA---TACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAATATACAATG-----A-A---GGCAA-----------AATA---
gi|15 : A-----------AATA---AAA--------------------CGTTC-CTA---TGCA--ATAATTTACAA-AACGGAAAAGT-ATG-AATACGT-AATGTTTACAGCGT----ACTGGAAA-A----------------GTGAATAAG-TA------AAGT-----TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-G----A-AT---T-AT-A-AA--TT-C----G--TG-ACT--T----T-C-T-T-GCTT------------------GAtgtttgatttgtcgtagaaagatatggaat
gi|16 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGC-ATAT---TGTT----TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TG----T-TTCATTATACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAATAtgtccaggagaaaagtgaccggacaa
gi|17 : TTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAG----A-AT---T-GT-AGAA--TTAC----G--TG-ACT--T----T-A-T-T-AC-T------------------GAC
gi|18 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaTAT-------AAA-----------------ATGTGAC------------A----------C-------ATCCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-AAGTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAgtccagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|19 : tatgtccatgataaaaaaaaaaaaaaaaagagAAT--CA-G--ACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACatggtgatagtgcatatatgata
gi|2 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcCATTACA--GGCAGGCAG-T-GAGTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACTT--AA------ATGG-GTAAATTA-AC--C-A-AT------------------TGATAGAAAAAT-C------G-CTT------------------TG--CT-----------ATT-----------AAGGAAGGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACTACAATAA---G-GACTTCC--------GGTTACTA--AAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAGC-AGATCTAATAAATTAATAGTCATAAAA-CT-AATAAAACAAAAAGCAAC-------ACCAATTGTAG-T-TAAGGT--GCACAAATACTAACTGAT---------TTAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA------A-AG------------ACA-AAA-----ATGACAATGCAGACAATGGCTA-----------TCTACATTGACAAA-TAT-CGC-ATATATACATTGGA-CAT--A--TAATAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TATGACAA-TGAAAACCGA---T----------------A--TAGCGT-TATA--TAG-AAATTGTAATT-TTG-CT-GCT-TT----ACA----AAGAAACTATAACAT----TGTCATTACA---TACAA-----------AGTA---AAAT---------GATT------C-TTC-CCA---TGTA--ATAAATCGCAA-AACAGAAAAAC-ATG-AATA--TAAA-G---AGAGCGT----AGTGGAAA-AT-TT--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--A----C-A-A-T-TCGT------------------GACTT------------TGA--------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTTGAGTTAATTTT---GTGCGAAAAG------------CCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACTGAGT---ATA-ACGCGGACAGT-CGGG-TAAA-TGAC---ATAAGGGGAAATTA-AG--T-TT-T-C-----------TAACAAATTATACTAATTAA-ATG-ACGG-CTT----CATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACGCC---AAAA------GGGG-A-C-AGATTA-C----TCG-----ACAA-AG------------T--------CC--------------------------------ATG--ACAAAG------AAA----------C-------ATCCTATAAG-TAAACTAGTCT-T-TGTTCTC--AAAACTTCCAAAT----------GTTTCTATTT-A-TC---TATTACCTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|20 : gAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACg
gi|21 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagc--ATAACTGACAA-AATAGATCGAC-ATG-AATA--TGAA-T---AGAACCT--------GAAA-AT-TG--ATGCCAAAAAGGAAAT----TA-A---TA--T-----TTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-G----ATATCAGT-GT-A-AT--TT-C----A--GG-ACT--TTAAAT-A-T-T-ACTT------------------GACgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|23 : TA-TA-------------CAA-------ATGA------------------TT------------------GG------GAAG---TTC--ACATTAAA------ATGATGGAAAATA-AT--T-A-TT------------------TAATACAAAATT-C------G-CTT------------------CT--CT-----------ATG-----------AGGAATTATT---CTT---TGG--ACAA--ATGATTCTTTATTTTAA-AA-CAT---CA-T-TT-----GCAATAT-CACTGG-GACTTCC--------GGTTAATG--AAgtcaagagacaaaatatcctaaaaattcga
gi|24 : T-TACGACAA-AGAAAACCGA---TAAA--C--AT---GG-AA-TAGCAT-CATA--TAA-AAATTAAAATT-GTG-AC-ACT-TT----ACA----AAGAAGCTGTA---------------ACA---TACAA-----------AGTA---A-------------ATTA-----TATTTGATT---TGTAGTATAAA--GCAA-A--GGAA
gi|25 : ACTTA-AAAATTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAttttaagataaa
gi|26 : -C-AGACTA-C----TCG-----GCAA-AGTATATCAACAAGT--------ATGATATA------AAATATATAATAAAATAAT-ATGT-ACGGGG------GAA----------TATAGCAGATCCTTTAAG-TATACTAGTTT-aagggtaatgtgcctaat
gi|27 : ATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-G----A-AT---T-GT-A-AA--TT-C----G--TT-ACT--T----T-A-T-T-ACTT------------------GAC
gi|28 : tttgttgtgatatcgtaatgtggaA---AAAT---------AATTA-----CGTTC-CTA---TGCA--ATAGATTGTAA-AACAGAAAAAgtccaggagaaaa
gi|29 : gtacgaattgatctaaattctttcagtttagACTTCC--------GGTTACCA--AAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAGC--GAA-------ATT--------TAAAA-tctaagcttacgt
gi|3 : GTAAAA-T-------CTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACagaaat
gi|3 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGAATAATCTTGATACGAGTGGT------------------GG------GGAA---TTTTGACAT--AA------AAGG-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAATT-C------G-CTTTGCTATGAAGGATGTTCTCG--CTTGTATGGCATAATG-----------AAG-ATGGCTT--ATT---CGG--AAAA--ATG--TC---------A-GA---T---CA-TGTTAC---ACAGTAA-GA---G-GA-TTCC--------GGTT--TA--A-G--AAA------GGGGGGTTAAG-AA--GAGA----CTAACACTAG--AGAT------------------TAAAATCT-AATGAA-TAAAAAGCAAC------TACTAAT-CTAGATATAAAGT--GCACAT-TACTAAGTGAT------A--TAAT----GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------AC-------A-A-------------ATAGAAA-----ATGGC--TACAGAAAATGG-TA-----------TCTTAATTTACAAA-AAT--GC-ATAT------CGAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GG----T-TTTGGT---CGA--A-TGAAG--CGA---TTTA--C--ATTGGGG-AAATAGGGT--ATC--TAG-AAATTGTAGTTATTG--C-GCT-TC----A-------AGAAAATATAATAC----T------ACAAGTTAAAATGATTTGAACGAATATCTAAATTAGAGTTTAGATTATAATACGTTC-CTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATA--T-AA-----AGA-CGTTGACAGTGGAAATATATGGAATACTAAAAAGTG--TAAG-TA-AAA--GAATAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-G----A-A----T-GT-A-AA----------G---G-ACTTGT----T-G-T-TAACTT------------------GACgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|30 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaGATTGCTTACATTAA-CAG--ACCC--ATC--AC---------ATGG-C-T---TT-T-TTAC---ACATTCA-GA---GAGATTTCC--------GGTTAgtcaggagaaaactgacc
gi|4 : tGTAAAA-T-------CTG-AAATTTCA-G-GACAG-----A-AGAACG-G----AGAT---T-GTAA-AA--TT-C----G--TC-GCT--T----T-AGTAT-ACTTG-----------------GACCT------------atga
gi|4 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttCATTACACAGGCAGGCAGGT-GATTAATAA------------TAA-------ATGAATTAATCTTGATGACGA-GT------------------GGTGT---GGGA---TTTTACAAT--AA------ATGGCGGAAATTA-AC--CCA-AG------------------TGATAGAAAATTTC------G-CTT------------------TGGCCT-----------ATG-----------AAGGATTG-T---ATT---CAG--ACAATGA-G--TC---------A-GAAC-T---AAGT-TTACCATACACTAA----------CTTCC--------GGTTACTA--AAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAAC-AGAT-------ATTA-------TAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-ATAT---T---GAA-CGT--A--AAATGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|5 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaTAAATAAGGTA-AAAATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTG----A-AT---TTGT-A-AAATTT-C----GAGTGGACT--T----T-A-T-T-ACTTCGACGCCAGGAGAAAACTGACCG------------TGACAA-----TTCAAGTTTACG---CGTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA-------TTG---TAA--AT---GTGCGAAAAGAGAA--------GCTATTATT---TAAT-GAAATT--AAAAGACAACACAAATTTAGCTG-GGGAAAG-ACT---T---ATA-ACGCGGAC-GA-CAGG-TAAATTGACT--ATGTGGGG-AATTA-AG----TTATCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCCCAAAAAG------GGGG-GAC-AGACTA-C----TCG-----ACAA-AG------------T--------A
gi|5 : acagaAA-AA------------T--------AAAATAT-------AGAA--------------T-ATGT-AGGAAG------GAATGCGACA---C-------ATCCTTTAAG-TAAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGTTGTTACA-GTTTCTATTC-A-TC---TAAAAACTCACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAttattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|6 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaAAAA-T-CTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--T--ACT--T----TAA-T-T-ACTT-------------------ACCatggtgaatgtgcatatatga
gi|6 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------ATAATCTTGATACGAGTGATGG------GGAA---TTTTAATGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------TG--CT-----------ATG-----------AAAGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CC-T-TAAC---ACAATAG-AA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|7 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaTTGTAATT-A-G-AC-TAT-CT----A---------AAACTCTAAAAT----T------------TA-GA-----------AATT---AAAT---------GTTCA-----GGA-C-CTA---TGCA--ATAAATCGCAA-AATCGAAAAAC-ATG-AATA--T-AA-----AGAGCGT----ACTGGAAA-AT-TG--ATACTAAAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-A----A-AT---T-GT-A-AA--TT-CGTGAG--TG-ACT--T----T-C-T-T-GCTT------------------GACGT------------CCA--------TGCAGG---A-GAAAAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGA--------TG---TAAGCTTAAGGTGCGACAA-GAA---------ACTATT
gi|7 : taaaaagtaaagtgact---GTGCGAAAAGGGGCTGAACATTGTTATCATTG--CAATCGACATTTTAAGA--CAGCACAA-TTTA-CTATGGGGGTTT-CT---TTATATA-ACGCGGAGAAA-AAGGGCAAA-TGACTTAATATGGGGAAATTA-AG--T-TTTT-TGTTGTTTTTTTTAACAAAGTACTCTAA--TG-ATG-TCGG-CTT----CTTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-ttaaaaggtgcgaaaaggggctgaacattgttatcattgcaatcgacattttaagacagcacaatttactatgggggtttctttatataacgcggagaaaaagggcaaatgacttaatatggggaaattaagttttttgttgttttttttaacaaagtactctaatgatgtcggcttctttggtttgtatgacactaattgattttctcagattctc
gi|8 : taaaaagtaaagtgactttgtaattagactatctaaaactctaaaatttagaaattaaatgttcaggacctatgcaataaatcgcaaaatcgaaaaacatgaatataaagagcgtactggaaaattgatactaaaaagtaaatacatgtagtataagtctctttacctgaaatcaggacagtccctgagacgaaattgtaaattcgtgagtgactttcttgcttgacgtccatgcaggagaaaagtgaccagacgattcaagcttgagttgatcttttcgatgtaagcttaaggtgcgacaagaaactattttaaaag-------TTCAAG-T-A-G---CGTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA-------T-G---TA----T---GTGCGAAA---GA---------G-TATTATTGGTTAATTGAAATT--AAA---CAACA-GT-TTTA-CTGTGG--AATTACT---T---ATATACG-GGATATATCAGG-TAAA-TGAC---ATATGCGGAAATTACAG----TTAT-T-----------TAA-AAATTA-ACTAA--AGAATG-TCGGACTT----TTTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-GCCAGAAAAAAAGGGGGGGG-G-CGAGCATA-C----TCG-----ACAAGAG------------TAATTATTAACAATATGTCAGACAAATA-------------TAATGT-AGGAAG------GAATAGCGACCAGC-------ATCCTTTAAATTAAACTAGTC--T-TGTTCTC--AAAA--TC--AATGTTGTTA-C-ATTTGTATTTCATTC---TAAAGACTT-TGAAATTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTctc
gi|9 : acaa------------------GT------------------GG------GGAA---TTTTAACAT--AA------ACGG-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAATT-C------G-CTT------------------TG--TT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ACG--TC---------A-GA-C-T---CA-T-GTAC---ACAATAAGAA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGAGGGGTAAGCA-----------------CCAGC-AGAT-------AT-A------ATAAAA-CT-AAT-----------CTAC------TA-TAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A--G------------ACA-AAA-----ATTACAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAG-CGC-ATAT---T---GGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GA----A-TTTAGT-TATGACAA-TGAAAACCGA---TAAA--C--AT---GGAA--TAGCGT-TATCTATAG-AAATTGTAATT-CTG-CC-GCT-TT----ACA----AAGAAACTATAATa
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 333333333333 2222222 1111111111111111111111111111111111111111111111 111 111111 1 555555555555555555 111111 5555555555555555555555555555555555555555555555555 111 111 222222222 222222 11111111 11 111 1111 555555555555555555 111111 444444444 1111 1111111 1111111 55555555555555555555555 11111 222222222222 4444444 11111111 222222222222222222 22222222222222222222222 11111111111 4444444444444444444444444444444444444444444444444444444444444444444 111 1111 33333 222222 111111 22222 1111111111111 222222222222222222 55555555555555555555555 222222222 111 55555555555555555555555 444444444444444 11 11 111 1111111 333 666666666666666666666 11111 1111 22222 111 11 222 111 22222 1111 22222 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2222222 11 222 111 111 1111
lowQualScore : 11 8 8 6 444444444444 1111111 7777777777777777777777777777777777777777777777 000 77 666666 1 5 77 5 5 444444444444444444 5 666666 5 8888888888888888888888888888888888888888888888888 0 333 555 66 66 66 000000000 5 666 888 5 5 888 111111 5 66666666 66 77 99 4 222 0000 5 5 111111111111111111 5 6 1 3 999999 6 6 66 9 5 33 222222222 0 4444 5 66 5 66 3333333 66 66 6666666 33333333333333333333333 5 22222 3 0 777777777777 0 5 55 1111111 1 5 77777 1 66 5 5 55555555 111111111111111111 4 5 0 66666666666666666666666 5 66 5 5 88 5 5 11111111111 7777777777777777777777777777777777777777777777777777777777777777777 1 6 111 77 4 5 4 8 8 8888 77777 3 111111 8 555555 6 22222 3 5555555555555 3 33 2 2 99999 2 2 5 5555 5 777 2 2 2 33 5 5555 33 5 33 5555 333 2 2 222222222222222222 88888888888888888888888 000000000 8 0 0 444 8 88 99999999999999999999999 666666666666666 11 3 11 111 8 8 0 11 9999999 8 0 8 8 8 111 0 8 777777777777777777777 99 11111 8 8 7777 1 8 8 0 8 55555 777 0 33 6 333 222 00000 8 7777 00000 6 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1111111 6 6 8 11 99 444 5 8 8 444 9 5 3 6 6 8 5 444 0 7777
lowQualScore : .. . . . ............ ....... .............................................. ... .. ...... . . .. . . .................. . ...... . ................................................. . ... ... .. .. .. ......... . ... ... . . ... ...... . ........ .. .. .. . ... .... . . .................. . . . . ...... . . .. . . .. ......... . .... . .. . .. ....... .. .. ....... ....................... . ..... . . ............ . . .. ....... . . ..... . .. . . ........ .................. . . . ....................... . .. . . .. . . ........... ................................................................... . . ... .. . . . . . .... ..... . ...... . ...... . ..... . ............. . .. . . ..... . . . .... . ... . . . .. . .... .. . .. .... ... . . .................. ....................... ......... . . . ... . .. ....................... ............... .. . .. ... . . . .. ....... . . . . . ... . . ..................... .. ..... . . .... . . . . . ..... ... . .. . ... ... ..... . .... ..... . ......................................................................................... ....... . . . .. .. ... . . . ... . . . . . . . ... . ....
lowQualScore : 00 0 0 7 222222222222 7777777 6666666666666666666666666666666666666666666666 000 99 444444 4 7 99 7 7 333333333333333333 7 444444 7 1111111111111111111111111111111111111111111111111 2 888 666 99 99 99 000000000 0 222 888 0 0 888 666666 0 11111111 99 99 44 3 999 6666 0 7 333333333333333333 7 7 0 2 222222 7 7 99 4 6 99 666666666 4 0000 0 99 0 99 5555555 99 99 2222222 55555555555555555555555 0 55555 1 2 000000000000 2 0 22 9999999 2 0 88888 1 99 0 0 66666666 555555555555555555 4 0 9 99999999999999999999999 0 99 0 0 11 0 0 88888888888 3333333333333333333333333333333333333333333333333333333333333333333 0 7 777 99 0 7 0 0 0 0000 00000 2 666666 0 666666 7 00000 2 1111111111111 3 99 9 7 33333 7 7 3 7777 3 333 7 7 7 77 3 7777 77 3 77 7777 888 7 7 333333333333333333 22222222222222222222222 000000000 0 8 8 000 0 88 77777777777777777777777 888888888888888 00 8 00 888 0 0 8 66 0000000 0 8 0 0 0 444 8 0 666666666666666666666 88 44444 0 0 0000 4 0 0 8 0 00000 555 8 88 5 000 000 00000 0 0000 00000 7 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 7777777 7 7 0 00 66 666 0 0 0 000 3 7 5 7 7 0 6 000 8 0000
consensus : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T---TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( family-7825 ) : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T---TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
gi|1 : -GAGAG-----A-AG-ACC-GTGAAA-ATG--T-GT-A-AA--TTCC----G--TGAACT--T----T---T-T-ATT--------------------ACCT------------TAAC-------GTCGAG
gi|1 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggaACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAATATAATCTGATTACGA------------------GT------------------GGTTGGGGGGAGATTTTTTGACAT--AATAAATTGTGG-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATT-TTATCCTGTCTT------------------CG--TT-----------ATGCGGCTAATGATAGGAATTTCT---ATTAAACGGTCACAA--ATG--TC---------A-GA-C-TGCCTA-T-TTAC---ACAATAAGAA---G-GACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGCA---GAGAACTTTTA-CACTAGCCAGAT-------AT-G------ATAAAA-CTTAATGAAACAAAAAGCAATAAACCATACTAATTCTTG-T-TAAAGTTAGCACAAATAATAA--AGTG-AA--A--T-AT-AACGTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAACATACACTA-AGAAGAAGAGCACAACA-GAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCA-ATAT---TCGAACCGTTAA--AAATAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGG----ATTTTAGT-TACGACAACTGAAAGCCAAACTTTAA--CAAAT---GGAA--TAGCGTATATC--TAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAA--GT-A------TATTAT-----T----ACAA-----------GATA---AAAgaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaacaggcaggcagtagattataaagcaaatgaatataatctgattacgagtggttggggggagattttttgacataataaattgtgggaaaattatacagcaatattggggattgtttgatttaataaaaaattttatcctgtcttcgttatgcggctaatgataggaatttctattaaacggtcacaaatgtcagactgcctatttacacaataagaaggactttccccctccgggttactagaaagaaaaaaaggttggggaagcagagaacttttacactagccagatatgataaaacttaatgaaacaaaaagcaataaaccatactaattcttgttaaagttagcacaaataataaagtgaaatataacgttacagtattggtccaaagatgaggggagaaagcgttggaacgttataaacatacactaagaagaagagcacaacagaagacggatggcaatactgaaaatggctacatggtaaatctctacatttaaaaataatgcgcaatattcgaaccgttaaaaataatatatttttgttaactataaaaacagctttttgcacggaggattttagttacgacaactgaaagccaaactttaacaaatggaatagcgtatatctagaaaattgtattttgcacagctgtttctaacacaataagaaagtatattattacaagataaaaaatctagaaatttgaatatcaacatcatttcgcattat
gi|10 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaAGA----CTA-CACTAGC-AGAT-------AT-A------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-AAAAGT--GCACAAATACTAAGTGATATAATTA--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATA------TCGAA-CGT--A--AAATAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GG----A-TTTAGT-TACGACAA-AGAAAGCGAA---CTAGCTC--AT----A-A--CAGTGT-T-TC--TCG-GAAaatctagaaatttgaatatcaacatcatttcgcattat
gi|11 : GGAAATTG-AGGATGTTATGTCA---------TAACATATTAT--CAA--GG-ATGGTTGG-ATTGTTCTATTGATTTTTAAGGACACTGAATTTATTT-CTCATATTGT-----CATTTTACACGAAAAATGCC--AAAAAAAGGGGCG-CAGAT-----TAGCGTAATTGTCCATACAA-AGAAAT--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGGAGGAATGTGAA----------CAT-------CCTTTAAA-TAAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGTTGTTAGA-GTTT-TATTC-A-TCTTTTTAAAACTTA--A------GTAGAAATTTGGACAACAT--TAG-Aaacgggagatcattttgaatccatttta
gi|12 : GTAAAA-T-------CTG-CGAT--CT-G-GCGCG-----G-AG-CCG-G----A-AT---T-GT-C-GA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACGTCCAGGAGAAAACTGACCGGACAATTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------T-G---TAA--T----GTGCGAAAAGAAA----------CTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTG-CCGTGGGAAATTACG---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGAC---ATAgatg
gi|13 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGCATAT-T-----GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGTTTCA-TTTA---TACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TA-TACAA---TGAAGGCAA-----------AATA---
gi|15 : A-----------AATA---AAA--------------------CGTTC-CTA---TGCA--ATAATTTACAA-AACGGAAAAGT-ATG-AATACGT-AATGTTTACAGCGT----ACTGGAAA-A----------------GTGAATAAG-TA------AAGT-----TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-G----A-AT---T-AT-A-AA--TT-C----G--TG-ACT--T----T-C-T-T-GCTT------------------GAtgtttgatttgtcgtagaaagatatggaat
gi|16 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGCATAT-T-----GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TG----T-TTCATTATACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TAtgtccaggagaaaagtgaccggacaa
gi|17 : TTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAG----A-AT---T-GT-AGAA--TTAC----G--TG-ACT--T----T-A-T-T-AC-T------------------GAC
gi|18 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaTAT-------AAA------------------ATGTGAC------------A----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-AAGTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAgtccagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|19 : tatgtccatgataaaaaaaaaaaaaaaaagagAAT--CA-G--ACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACatggtgatagtgcatatatgata
gi|2 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcCATTACA--GGCAGGCAG-T-GAGTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACTT--AA------ATGG-GTAAATTA-AC--C-A-AT------------------TGATAGAAAAAT-C------G-CTT------------------TG--CT-----------ATT-----------AAGGAAGGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACTACAATAA---G-GACTTCC--------GGTTACTA--AAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAGC-AGATCTAATAAATTAATAGTCATAAAA-CT-AATAAAACAAAAAGCAAC-------ACCAATTGTAG-T-TAAGGT--GCACAAATACTAACTGAT---------TTAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA------A-AG------------ACA-AAA-----ATGACAATGCAGACAATGGCTA-----------TCTACATTGACAAA-TAT-CGCATATATACATTGGA-CAT--A--TAATAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TATGACAA-TGAAAACCGA---T----------------A--TAGCGT-TATA--TAG-AAATTGTAATT-TTG-CT-GCT-TT----ACA----AAGAAACTATAACATTGTCATTAC-A---T----ACAA-----------AGTA---AAAT---------GATT------C-TTC-CCA---TGTA--ATAAATCGCAA-AACAGAAAAAC-ATG-AATA--TAAA-G---AGAGCGT----AGTGGAAA-AT-TT--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--A----C-A-A-T-TCGT------------------GACTT------------TGA--------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTTGAGTTAATTTT---GTGCGAAAAG------------CCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACTGAGT---ATA-ACGCGGACAGT-CGGG-TAAA-TGAC---ATAAGGGGAAATTA-AG--T-TT-T-C-----------TAACAAATTATACTAATTAA-ATG-ACGG-CTT----CATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACGCC-----AAAAGGGG-A-CAGAT-----TA-C----TCG-----ACAA-AG---T--------CC---------------------------------------------ATG--ACAAAG------AAA----------CAT-------CCTATAAG-TAAACTAGTCT-T-TGTTCTC--AAAACTTCCAAAT----------GTTTCTATTT-A-TC---TATTACCTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|20 : gAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACg
gi|21 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagc--ATAACTGACAA-AATAGATCGAC-ATG-AATA--TGAA-T---AGAACCT--------GAAA-AT-TG--ATGCCAAAAAGGAAAT----TA-A---TA--T-----TTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-G----ATATCAGT-GT-A-AT--TT-C----A--GG-ACT--TTAAAT-A-T-T-ACTT------------------GACgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|23 : TA-TA-------------CAA-------ATGA------------------TT------------------GG------GAAG---TTC--ACATTAAA------ATGATGGAAAATA-AT--T-A-TT------------------TAATACAAAATT-C------G-CTT------------------CT--CT-----------ATG-----------AGGAATTATT---CTT---TGG--ACAA--ATGATTCTTTATTTTAA-AA-CAT---CA-T-TT-----GCAATAT-CACTGG-GACTTCC--------GGTTAATG--AAgtcaagagacaaaatatcctaaaaattcga
gi|24 : T-TACGACAA-AGAAAACCGA---TAAA--C--AT---GG-AA-TAGCAT-CATA--TAA-AAATTAAAATT-GTG-AC-ACT-TT----ACA----AAGAAGCTGTA-----------AC-A---T----ACAA-----------AGTA---A-------------ATTA-----TATTTGATT---TGTAGTATAAA--GCAA-A--GGAA
gi|25 : ACTTA-AAAATTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAttttaagataaa
gi|26 : -CAGAC-----TA-C----TCG-----GCAA-AG---T--------ATATCAACAAGTATGATAT-------AAAATATATAATAAAATAAT-ATGT-ACGGGG------GAA----------TATAGCAGATCCTTTAAG-TATACTAGTTT-aagggtaatgtgcctaat
gi|27 : ATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-G----A-AT---T-GT-A-AA--TT-C----G--TT-ACT--T----T-A-T-T-ACTT------------------GAC
gi|28 : tttgttgtgatatcgtaatgtggaA---AAAT---------AATTA-----CGTTC-CTA---TGCA--ATAGATTGTAA-AACAGAAAAAgtccaggagaaaa
gi|29 : gtacgaattgatctaaattctttcagtttagACTTCC--------GGTTACCA--AAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAGC--GAA-------ATT--------TAAAA-tctaagcttacgt
gi|3 : GTAAAA-T-------CTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACagaaat
gi|3 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGAATAATCTTGATACGAGTGGT------------------GG------GGAA---TTTTGACAT--AA------AAGG-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAATT-C------G-CTTTGCTATGAAGGATGTTCTCG--CTTGTATGGCATAATG-----------AAG-ATGGCTT--ATT---CGG--AAAA--ATG--TC---------A-GA---T---CA-TGTTAC---ACAGTAA-GA---G-GA-TTCC--------GGTT--TA--A-G--AAA------GGGGGGTTAAG-AA--GAGA----CTAACACTAG--AGAT------------------TAAAATCT-AATGAA-TAAAAAGCAAC------TACTAAT-CTAGATATAAAGT--GCACAT-TACTAAGTGAT------A--TAAT----GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------AC-------A-A-------------ATAGAAA-----ATGGC--TACAGAAAATGG-TA-----------TCTTAATTTACAAA-AAT--GCATAT------CGAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GG----T-TTTGGT---CGA--A-TGAAG--CGA---TTTA--C--ATTGGGG-AAATAGGGT--ATC--TAG-AAATTGTAGTTATTG--C-GCT-TC----A-------AGAAAATATAA------TACTAC-AAGTT----AAAATGATTTGAACGAATATCTAAATTAGAGTTTAGATTATAATACGTTC-CTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATA--T-AA-----AGA-CGTTGACAGTGGAAATATATGGAATACTAAAAAGTG--TAAG-TA-AAA--GAATAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-G----A-A----T-GT-A-AA----------G---G-ACTTGT----T-G-T-TAACTT------------------GACgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|30 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaGATTGCTTACATTAA-CAG--ACCC--ATC--AC---------ATGG-C-T---TT-T-TTAC---ACATTCA-GA---GAGATTTCC--------GGTTAgtcaggagaaaactgacc
gi|4 : tGTAAAA-T-------CTG-AAATTTCA-G-GACAG-----A-AGAACG-G----AGAT---T-GTAA-AA--TT-C----G--TC-GCT--T----T-AGTAT-ACTTG-----------------GACCT------------atga
gi|4 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttCATTACACAGGCAGGCAGGT-GATTAATAA------------TAA-------ATGAATTAATCTTGATGACGA-GT------------------GGTGT---GGGA---TTTTACAAT--AA------ATGGCGGAAATTA-AC--CCA-AG------------------TGATAGAAAATTTC------G-CTT------------------TGGCCT-----------ATG-----------AAGGATTG-T---ATT---CAG--ACAATGA-G--TC---------A-GAAC-T---AAGT-TTACCATACACTAA----------CTTCC--------GGTTACTA--AAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAAC-AGAT-------ATTA-------TAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T-----GAA-CGT--A--AAATGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|5 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaTAAATAAGGTA-AAAATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTG----A-AT---TTGT-A-AAATTT-C----GAGTGGACT--T----T-A-T-T-ACTTCGACGCCAGGAGAAAACTGACCG------------TGACAA-----TTCAAGTTTACG---CGTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA-------TTG---TAA--AT---GTGCGAAAAGAGAA--------GCTATTATT---TAAT-GAAATT--AAAAGACAACACAAATTTAGCTG-GGGAAAG-ACT---T---ATA-ACGCGGAC-GA-CAGG-TAAATTGACT--ATGTGGGG-AATTA-AG----TTATCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCC--CAAAAAGGGGG-GACAGAC-----TA-C----TCG-----ACAA-AG---T--------A
gi|5 : acagaAA-AA---T--------AA------------AATAT-------AGA-------------A--T-ATGT-AGGAAG------GAATGCGACA---CAT-------CCTTTAAG-TAAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGTTGTTACA-GTTTCTATTC-A-TC---TAAAAACTCACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAttattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|6 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaAAAA-T-CTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--T--ACT--T----TAA-T-T-ACTT-------------------ACCatggtgaatgtgcatatatga
gi|6 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------ATAATCTTGATACGAGTGATGG------GGAA---TTTTAATGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------TG--CT-----------ATG-----------AAAGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CC-T-TAAC---ACAATAG-AA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|7 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaTTGTAATT-A-G-AC-TAT-CT----A---------AAACTCTAA------AATT-------T----A-GA-----------AATT---AAAT---------GTTCA-----GGA-C-CTA---TGCA--ATAAATCGCAA-AATCGAAAAAC-ATG-AATA--T-AA-----AGAGCGT----ACTGGAAA-AT-TG--ATACTAAAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-A----A-AT---T-GT-A-AA--TT-CGTGAG--TG-ACT--T----T-C-T-T-GCTT------------------GACGT------------CCA--------TGCAGG---A-GAAAAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGA--------TG---TAAGCTTAAGGTGCGACAA-GAA---------ACTATT
gi|7 : taaaaagtaaagtgact---GTGCGAAAAGGGGCTGAACATTGTTATCATTG--CAATCGACATTTTAAGA--CAGCACAA-TTTA-CTATGGGGGTTT-CT---TTATATA-ACGCGGAGAAA-AAGGGCAAA-TGACTTAATATGGGGAAATTA-AG--T-TTTT-TGTTGTTTTTTTTAACAAAGTACTCTAA--TG-ATG-TCGG-CTT----CTTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-ttaaaaggtgcgaaaaggggctgaacattgttatcattgcaatcgacattttaagacagcacaatttactatgggggtttctttatataacgcggagaaaaagggcaaatgacttaatatggggaaattaagttttttgttgttttttttaacaaagtactctaatgatgtcggcttctttggtttgtatgacactaattgattttctcagattctc
gi|8 : taaaaagtaaagtgactttgtaattagactatctaaaactctaaaatttagaaattaaatgttcaggacctatgcaataaatcgcaaaatcgaaaaacatgaatataaagagcgtactggaaaattgatactaaaaagtaaatacatgtagtataagtctctttacctgaaatcaggacagtccctgagacgaaattgtaaattcgtgagtgactttcttgcttgacgtccatgcaggagaaaagtgaccagacgattcaagcttgagttgatcttttcgatgtaagcttaaggtgcgacaagaaactattttaaaag-------TTCAAG-T-A-G---CGTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA-------T-G---TA----T---GTGCGAAA---GA---------G-TATTATTGGTTAATTGAAATT--AAA---CAACA-GT-TTTA-CTGTGG--AATTACT---T---ATATACG-GGATATATCAGG-TAAA-TGAC---ATATGCGGAAATTACAG----TTAT-T-----------TAA-AAATTA-ACTAA--AGAATG-TCGGACTT----TTTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-GCCAGAAAAAAAGGGG-G-GGGGCGAGCATA-C----TCG-----ACAAGAG---TAATTATTAAC------------AATATGTCAGACAAA-------------TA-TAATGT-AGGAAG------GAATAGCGACCAGCAT-------CCTTTAAATTAAACTAGTC--T-TGTTCTC--AAAA--TC--AATGTTGTTA-C-ATTTGTATTTCATTC---TAAAGACTT-TGAAATTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTctc
gi|9 : acaa------------------GT------------------GG------GGAA---TTTTAACAT--AA------ACGG-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAATT-C------G-CTT------------------TG--TT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ACG--TC---------A-GA-C-T---CA-T-GTAC---ACAATAAGAA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGAGGGGTAAGCA-----------------CCAGC-AGAT-------AT-A------ATAAAA-CT-AAT-----------CTAC------TA-TAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A--G------------ACA-AAA-----ATTACAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAG-CGCATAT-T-----GGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GA----A-TTTAGT-TATGACAA-TGAAAACCGA---TAAA--C--AT---GGAA--TAGCGT-TATCTATAG-AAATTGTAATT-CTG-CC-GCT-TT----ACA----AAGAAACTATAA------Ta
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 333333333333 2222222 1111111111111111111111111111111111111111111111 111 111111 1 555555555555555555 111111 5555555555555555555555555555555555555555555555555 111 111 222222222 222222 11111111 11 111 1111 555555555555555555 111111 444444444 1111 1111111 1111111 55555555555555555555555 11111 222222222222 4444444 11111111 222222222222222222 22222222222222222222222 11111111111 4444444444444444444444444444444444444444444444444444444444444444444 111 1111 33333 222222 111111 22222 1111111111111 222222222222222222 55555555555555555555555 222222222 111 55555555555555555555555 444444444444444 11 11 111 1111111 333 666666666666666666666 11111 1111 22222 111 11 222 111 22222 1111 22222 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2222222 11 222 111 111 1111
lowQualScore : 11 8 8 6 444444444444 1111111 7777777777777777777777777777777777777777777777 000 77 666666 1 5 77 5 5 444444444444444444 5 666666 5 8888888888888888888888888888888888888888888888888 0 333 555 66 66 66 000000000 5 666 888 5 5 888 111111 5 66666666 66 77 99 4 222 0000 5 5 111111111111111111 5 6 1 3 999999 6 6 66 9 5 33 222222222 0 4444 5 66 5 66 3333333 66 66 6666666 33333333333333333333333 5 22222 3 0 777777777777 0 5 55 1111111 1 5 77777 1 66 5 5 55555555 111111111111111111 4 5 0 66666666666666666666666 5 66 5 5 88 5 5 11111111111 7777777777777777777777777777777777777777777777777777777777777777777 1 6 111 77 4 5 4 8 8 8888 77777 3 111111 8 555555 6 22222 3 5555555555555 3 33 2 2 99999 2 2 5 5555 5 777 2 2 2 33 5 5555 33 5 33 5555 333 2 2 222222222222222222 88888888888888888888888 000000000 8 0 0 444 8 88 99999999999999999999999 666666666666666 11 3 11 111 8 8 0 11 9999999 8 0 8 8 8 111 0 8 777777777777777777777 99 11111 8 8 7777 1 8 8 0 8 55555 777 0 33 6 333 222 00000 8 7777 00000 6 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1111111 6 6 8 11 99 444 5 8 8 444 9 5 3 6 6 8 5 444 0 7777
lowQualScore : .. . . . ............ ....... .............................................. ... .. ...... . . .. . . .................. . ...... . ................................................. . ... ... .. .. .. ......... . ... ... . . ... ...... . ........ .. .. .. . ... .... . . .................. . . . . ...... . . .. . . .. ......... . .... . .. . .. ....... .. .. ....... ....................... . ..... . . ............ . . .. ....... . . ..... . .. . . ........ .................. . . . ....................... . .. . . .. . . ........... ................................................................... . . ... .. . . . . . .... ..... . ...... . ...... . ..... . ............. . .. . . ..... . . . .... . ... . . . .. . .... .. . .. .... ... . . .................. ....................... ......... . . . ... . .. ....................... ............... .. . .. ... . . . .. ....... . . . . . ... . . ..................... .. ..... . . .... . . . . . ..... ... . .. . ... ... ..... . .... ..... . ......................................................................................... ....... . . . .. .. ... . . . ... . . . . . . . ... . ....
lowQualScore : 00 0 0 7 222222222222 7777777 6666666666666666666666666666666666666666666666 000 99 444444 4 7 99 7 7 333333333333333333 7 444444 7 1111111111111111111111111111111111111111111111111 2 888 666 99 99 99 000000000 0 222 888 0 0 888 666666 0 11111111 99 99 44 3 999 6666 0 7 333333333333333333 7 7 0 2 222222 7 7 99 4 6 99 666666666 4 0000 0 99 0 99 5555555 99 99 2222222 55555555555555555555555 0 55555 1 2 000000000000 2 0 22 9999999 2 0 88888 1 99 0 0 66666666 555555555555555555 4 0 9 99999999999999999999999 0 99 0 0 11 0 0 88888888888 3333333333333333333333333333333333333333333333333333333333333333333 0 7 777 99 0 7 0 0 0 0000 00000 2 666666 0 666666 7 00000 2 1111111111111 3 99 9 7 33333 7 7 3 7777 3 333 7 7 7 77 3 7777 77 3 77 7777 888 7 7 333333333333333333 22222222222222222222222 000000000 0 8 8 000 0 88 77777777777777777777777 888888888888888 00 8 00 888 0 0 8 66 0000000 0 8 0 0 0 444 8 0 666666666666666666666 88 44444 0 0 0000 4 0 0 8 0 00000 555 8 88 5 000 000 00000 0 0000 00000 7 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 7777777 7 7 0 00 66 666 0 0 0 000 3 7 5 7 7 0 6 000 8 0000
consensus : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T---TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( family-7825 ) : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T---TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
gi|1 : -GAGAG-----A-AG-ACC-GTGAAA-ATG--T-GT-A-AA--TTCC----G--TGAACT--T----T---T-T-ATT--------------------ACCT------------TAAC-------GTCGAG
gi|1 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggaACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAATATAATCTGATTACGA------------------GT------------------GGTTGGGGGGAGATTTTTTGACAT--AATAAATTGTGG-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATT-TTATCCTGTCTT------------------CG--TT-----------ATGCGGCTAATGATAGGAATTTCT---ATTAAACGGTCACAA--ATG--TC---------A-GA-C-TGCCTA-T-TTAC---ACAATAAGAA---G-GACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGCA---GAGAACTTTTA-CACTAGCCAGAT-------AT-G------ATAAAA-CTTAATGAAACAAAAAGCAATAAACCATACTAATTCTTG-T-TAAAGTTAGCACAAATAATAA--AGTG-AA--A--T-AT-AACGTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAACATACACTA-AGAAGAAGAGCACAACA-GAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCA-ATAT---TCGAACCGTTAA--AAATAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGG----ATTTTAGT-TACGACAACTGAAAGCCAAACTTTAA--CAAAT---GGAA--TAGCGTATATC--TAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAA--GT-A------TATTAT-----T----ACAA-----------GATA---AAAgaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaacaggcaggcagtagattataaagcaaatgaatataatctgattacgagtggttggggggagattttttgacataataaattgtgggaaaattatacagcaatattggggattgtttgatttaataaaaaattttatcctgtcttcgttatgcggctaatgataggaatttctattaaacggtcacaaatgtcagactgcctatttacacaataagaaggactttccccctccgggttactagaaagaaaaaaaggttggggaagcagagaacttttacactagccagatatgataaaacttaatgaaacaaaaagcaataaaccatactaattcttgttaaagttagcacaaataataaagtgaaatataacgttacagtattggtccaaagatgaggggagaaagcgttggaacgttataaacatacactaagaagaagagcacaacagaagacggatggcaatactgaaaatggctacatggtaaatctctacatttaaaaataatgcgcaatattcgaaccgttaaaaataatatatttttgttaactataaaaacagctttttgcacggaggattttagttacgacaactgaaagccaaactttaacaaatggaatagcgtatatctagaaaattgtattttgcacagctgtttctaacacaataagaaagtatattattacaagataaaaaatctagaaatttgaatatcaacatcatttcgcattat
gi|10 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaAGA----CTA-CACTAGC-AGAT-------AT-A------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-AAAAGT--GCACAAATACTAAGTGATATAATTA--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATA------TCGAA-CGT--A--AAATAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GG----A-TTTAGT-TACGACAA-AGAAAGCGAA---CTAGCTC--AT----A-A--CAGTGT-T-TC--TCG-GAAaatctagaaatttgaatatcaacatcatttcgcattat
gi|11 : GGAAATTG-AGGATGTTATGTCA---------TAACATATTAT--CAA--GG-ATGGTTGG-ATTGTTCTATTGATTTTTAAGGACACTGAATTTATTT-CTCATATTGT-----CATTTTACACGAAAAATGCC--AAAAAAAGGGGCG-CAGAT-----TAGCGTAATTGTCCATACAA-AGAAAT--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGGAGGAATGTGAA----------CAT-------CCTTTAAA-TAAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGTTGTTAGA-GTTT-TATTC-A-TCTTTTTAAAACTTA--A------GTAGAAATTTGGACAACAT--TAG-Aaacgggagatcattttgaatccatttta
gi|12 : GTAAAA-T-------CTG-CGAT--CT-G-GCGCG-----G-AG-CCG-G----A-AT---T-GT-C-GA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACGTCCAGGAGAAAACTGACCGGACAATTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------T-G---TAA--T----GTGCGAAAAGAAA----------CTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTG-CCGTGGGAAATTACG---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGAC---ATAgatg
gi|13 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGCATAT-T-----GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGTTTCA-TTTA---TACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TA-TACAA---TGAAGGCAA-----------AATA---
gi|15 : A-----------AATA---AAA--------------------CGTTC-CTA---TGCA--ATAATTTACAA-AACGGAAAAGT-ATG-AATACGT-AATGTTTACAGCGT----ACTGGAAA-A----------------GTGAATAAG-TA------AAGT-----TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-G----A-AT---T-AT-A-AA--TT-C----G--TG-ACT--T----T-C-T-T-GCTT------------------GAtgtttgatttgtcgtagaaagatatggaat
gi|16 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagGT--GTACAA-TA-TAAAAGATG-AA--AGTTAATTA--GTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC-------A--G------------ACA-AAA-----ATAACCATGAAGAAAATAGTTA------------------------A-AAT-TGCATAT-T-----GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TG----T-TTCATTATACAACAA-TGGAAATCGA---TCAG--C--AT---GG-AC-TAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TAtgtccaggagaaaagtgaccggacaa
gi|17 : TTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAG----A-AT---T-GT-AGAA--TTAC----G--TG-ACT--T----T-A-T-T-AC-T------------------GAC
gi|18 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaTAT-------AAA------------------ATGTGAC------------A----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-AAGTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAgtccagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|19 : tatgtccatgataaaaaaaaaaaaaaaaagagAAT--CA-G--ACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACatggtgatagtgcatatatgata
gi|2 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcCATTACA--GGCAGGCAG-T-GAGTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACTT--AA------ATGG-GTAAATTA-AC--C-A-AT------------------TGATAGAAAAAT-C------G-CTT------------------TG--CT-----------ATT-----------AAGGAAGGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACTACAATAA---G-GACTTCC--------GGTTACTA--AAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAGC-AGATCTAATAAATTAATAGTCATAAAA-CT-AATAAAACAAAAAGCAAC-------ACCAATTGTAG-T-TAAGGT--GCACAAATACTAACTGAT---------TTAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACA------A-AG------------ACA-AAA-----ATGACAATGCAGACAATGGCTA-----------TCTACATTGACAAA-TAT-CGCATATATACATTGGA-CAT--A--TAATAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TATGACAA-TGAAAACCGA---T----------------A--TAGCGT-TATA--TAG-AAATTGTAATT-TTG-CT-GCT-TT----ACA----AAGAAACTATAACATTGTCATTAC-A---T----ACAA-----------AGTA---AAAT---------GATT------C-TTC-CCA---TGTA--ATAAATCGCAA-AACAGAAAAAC-ATG-AATA--TAAA-G---AGAGCGT----AGTGGAAA-AT-TT--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--A----C-A-A-T-TCGT------------------GACTT------------TGA--------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTTGAGTTAATTTT---GTGCGAAAAG------------CCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACTGAGT---ATA-ACGCGGACAGT-CGGG-TAAA-TGAC---ATAAGGGGAAATTA-AG--T-TT-T-C-----------TAACAAATTATACTAATTAA-ATG-ACGG-CTT----CATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACGCC-----AAAAGGGG-A-CAGAT-----TA-C----TCG-----ACAA-AG---T--------CC---------------------------------------------ATG--ACAAAG------AAA----------CAT-------CCTATAAG-TAAACTAGTCT-T-TGTTCTC--AAAACTTCCAAAT----------GTTTCTATTT-A-TC---TATTACCTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|20 : gAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT------------------GACg
gi|21 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagc--ATAACTGACAA-AATAGATCGAC-ATG-AATA--TGAA-T---AGAACCT--------GAAA-AT-TG--ATGCCAAAAAGGAAAT----TA-A---TA--T-----TTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-G----ATATCAGT-GT-A-AT--TT-C----A--GG-ACT--TTAAAT-A-T-T-ACTT------------------GACgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|23 : TA-TA-------------CAA-------ATGA------------------TT------------------GG------GAAG---TTC--ACATTAAA------ATGATGGAAAATA-AT--T-A-TT------------------TAATACAAAATT-C------G-CTT------------------CT--CT-----------ATG-----------AGGAATTATT---CTT---TGG--ACAA--ATGATTCTTTATTTTAA-AA-CAT---CA-T-TT-----GCAATAT-CACTGG-GACTTCC--------GGTTAATG--AAgtcaagagacaaaatatcctaaaaattcga
gi|24 : T-TACGACAA-AGAAAACCGA---TAAA--C--AT---GG-AA-TAGCAT-CATA--TAA-AAATTAAAATT-GTG-AC-ACT-TT----ACA----AAGAAGCTGTA-----------AC-A---T----ACAA-----------AGTA---A-------------ATTA-----TATTTGATT---TGTAGTATAAA--GCAA-A--GGAA
gi|25 : ACTTA-AAAATTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAttttaagataaa
gi|26 : -CAGAC-----TA-C----TCG-----GCAA-AG---T--------ATATCAACAAGTATGATAT-------AAAATATATAATAAAATAAT-ATGT-ACGGGG------GAA----------TATAGCAGATCCTTTAAG-TATACTAGTTT-aagggtaatgtgcctaat
gi|27 : ATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-G----A-AT---T-GT-A-AA--TT-C----G--TT-ACT--T----T-A-T-T-ACTT------------------GAC
gi|28 : tttgttgtgatatcgtaatgtggaA---AAAT---------AATTA-----CGTTC-CTA---TGCA--ATAGATTGTAA-AACAGAAAAAgtccaggagaaaa
gi|29 : gtacgaattgatctaaattctttcagtttagACTTCC--------GGTTACCA--AAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAGC--GAA-------ATT--------TAAAA-tctaagcttacgt
gi|3 : GTAAAA-T-------CTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACagaaat
gi|3 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGAATAATCTTGATACGAGTGGT------------------GG------GGAA---TTTTGACAT--AA------AAGG-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAATT-C------G-CTTTGCTATGAAGGATGTTCTCG--CTTGTATGGCATAATG-----------AAG-ATGGCTT--ATT---CGG--AAAA--ATG--TC---------A-GA---T---CA-TGTTAC---ACAGTAA-GA---G-GA-TTCC--------GGTT--TA--A-G--AAA------GGGGGGTTAAG-AA--GAGA----CTAACACTAG--AGAT------------------TAAAATCT-AATGAA-TAAAAAGCAAC------TACTAAT-CTAGATATAAAGT--GCACAT-TACTAAGTGAT------A--TAAT----GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------AC-------A-A-------------ATAGAAA-----ATGGC--TACAGAAAATGG-TA-----------TCTTAATTTACAAA-AAT--GCATAT------CGAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GG----T-TTTGGT---CGA--A-TGAAG--CGA---TTTA--C--ATTGGGG-AAATAGGGT--ATC--TAG-AAATTGTAGTTATTG--C-GCT-TC----A-------AGAAAATATAA------TACTAC-AAGTT----AAAATGATTTGAACGAATATCTAAATTAGAGTTTAGATTATAATACGTTC-CTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATA--T-AA-----AGA-CGTTGACAGTGGAAATATATGGAATACTAAAAAGTG--TAAG-TA-AAA--GAATAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-G----A-A----T-GT-A-AA----------G---G-ACTTGT----T-G-T-TAACTT------------------GACgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|30 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaGATTGCTTACATTAA-CAG--ACCC--ATC--AC---------ATGG-C-T---TT-T-TTAC---ACATTCA-GA---GAGATTTCC--------GGTTAgtcaggagaaaactgacc
gi|4 : tGTAAAA-T-------CTG-AAATTTCA-G-GACAG-----A-AGAACG-G----AGAT---T-GTAA-AA--TT-C----G--TC-GCT--T----T-AGTAT-ACTTG-----------------GACCT------------atga
gi|4 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttCATTACACAGGCAGGCAGGT-GATTAATAA------------TAA-------ATGAATTAATCTTGATGACGA-GT------------------GGTGT---GGGA---TTTTACAAT--AA------ATGGCGGAAATTA-AC--CCA-AG------------------TGATAGAAAATTTC------G-CTT------------------TGGCCT-----------ATG-----------AAGGATTG-T---ATT---CAG--ACAATGA-G--TC---------A-GAAC-T---AAGT-TTACCATACACTAA----------CTTCC--------GGTTACTA--AAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAAC-AGAT-------ATTA-------TAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC-------ATAG------------AGA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T-----GAA-CGT--A--AAATGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|5 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaTAAATAAGGTA-AAAATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTG----A-AT---TTGT-A-AAATTT-C----GAGTGGACT--T----T-A-T-T-ACTTCGACGCCAGGAGAAAACTGACCG------------TGACAA-----TTCAAGTTTACG---CGTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA-------TTG---TAA--AT---GTGCGAAAAGAGAA--------GCTATTATT---TAAT-GAAATT--AAAAGACAACACAAATTTAGCTG-GGGAAAG-ACT---T---ATA-ACGCGGAC-GA-CAGG-TAAATTGACT--ATGTGGGG-AATTA-AG----TTATCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCC--CAAAAAGGGGG-GACAGAC-----TA-C----TCG-----ACAA-AG---T--------A
gi|5 : acagaAA-AA---T--------AA------------AATAT-------AGA-------------A--T-ATGT-AGGAAG------GAATGCGACA---CAT-------CCTTTAAG-TAAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGTTGTTACA-GTTTCTATTC-A-TC---TAAAAACTCACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAttattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|6 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaAAAA-T-CTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--T--ACT--T----TAA-T-T-ACTT-------------------ACCatggtgaatgtgcatatatga
gi|6 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------ATAATCTTGATACGAGTGATGG------GGAA---TTTTAATGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------TG--CT-----------ATG-----------AAAGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CC-T-TAAC---ACAATAG-AA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|7 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaTTGTAATT-A-G-AC-TAT-CT----A---------AAACTCTAA------AATT-------T----A-GA-----------AATT---AAAT---------GTTCA-----GGA-C-CTA---TGCA--ATAAATCGCAA-AATCGAAAAAC-ATG-AATA--T-AA-----AGAGCGT----ACTGGAAA-AT-TG--ATACTAAAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-A----A-AT---T-GT-A-AA--TT-CGTGAG--TG-ACT--T----T-C-T-T-GCTT------------------GACGT------------CCA--------TGCAGG---A-GAAAAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGA--------TG---TAAGCTTAAGGTGCGACAA-GAA---------ACTATT
gi|7 : taaaaagtaaagtgact---GTGCGAAAAGGGGCTGAACATTGTTATCATTG--CAATCGACATTTTAAGA--CAGCACAA-TTTA-CTATGGGGGTTT-CT---TTATATA-ACGCGGAGAAA-AAGGGCAAA-TGACTTAATATGGGGAAATTA-AG--T-TTTT-TGTTGTTTTTTTTAACAAAGTACTCTAA--TG-ATG-TCGG-CTT----CTTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-ttaaaaggtgcgaaaaggggctgaacattgttatcattgcaatcgacattttaagacagcacaatttactatgggggtttctttatataacgcggagaaaaagggcaaatgacttaatatggggaaattaagttttttgttgttttttttaacaaagtactctaatgatgtcggcttctttggtttgtatgacactaattgattttctcagattctc
gi|8 : taaaaagtaaagtgactttgtaattagactatctaaaactctaaaatttagaaattaaatgttcaggacctatgcaataaatcgcaaaatcgaaaaacatgaatataaagagcgtactggaaaattgatactaaaaagtaaatacatgtagtataagtctctttacctgaaatcaggacagtccctgagacgaaattgtaaattcgtgagtgactttcttgcttgacgtccatgcaggagaaaagtgaccagacgattcaagcttgagttgatcttttcgatgtaagcttaaggtgcgacaagaaactattttaaaag-------TTCAAG-T-A-G---CGTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA-------T-G---TA----T---GTGCGAAA---GA---------G-TATTATTGGTTAATTGAAATT--AAA---CAACA-GT-TTTA-CTGTGG--AATTACT---T---ATATACG-GGATATATCAGG-TAAA-TGAC---ATATGCGGAAATTACAG----TTAT-T-----------TAA-AAATTA-ACTAA--AGAATG-TCGGACTT----TTTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-GCCAGAAAAAAAGGGG-G-GGGGCGAGCATA-C----TCG-----ACAAGAG---TAATTATTAAC------------AATATGTCAGACAAA-------------TA-TAATGT-AGGAAG------GAATAGCGACCAGCAT-------CCTTTAAATTAAACTAGTC--T-TGTTCTC--AAAA--TC--AATGTTGTTA-C-ATTTGTATTTCATTC---TAAAGACTT-TGAAATTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTctc
gi|9 : acaa------------------GT------------------GG------GGAA---TTTTAACAT--AA------ACGG-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAATT-C------G-CTT------------------TG--TT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ACG--TC---------A-GA-C-T---CA-T-GTAC---ACAATAAGAA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGAGGGGTAAGCA-----------------CCAGC-AGAT-------AT-A------ATAAAA-CT-AAT-----------CTAC------TA-TAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGAT------A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A--G------------ACA-AAA-----ATTACAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAG-CGCATAT-T-----GGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GA----A-TTTAGT-TATGACAA-TGAAAACCGA---TAAA--C--AT---GGAA--TAGCGT-TATCTATAG-AAATTGTAATT-CTG-CC-GCT-TT----ACA----AAGAAACTATAA------Ta
blockSeqs : CA G . A . . ATTAATCTTGATGACGAGTGGTGT . TA . T . . C C GCAT T . . TGCTATGAAGGATGTTCTCGCTTGTATGGCATAATG TAC AA . TG AT TTTATTTTA T CA . G G CAT CACTG A . . GC GG G AAT . A . CTAATAAATTAATAGTCA T . G A . A A . A C GT ATAATTA TA . AA . . TAAAAA . . . ATAG G . A T . C ATACATT A . AGA A . . . TGC ACGTACGGAA A . TTTACATTGGGGAAA . TA . A A . . ACA TACTACAAGTTAAAATGATTTGAACGAATATCTAAATTAGAGTTTAGATTATAATA A G AAA GT C T A C G TA G G TGACAG T TATGGA G TAGTA A AAAACTTCTTTAC C TT T A TCCCT C A A . T CAG T A G AT A GTGA AG G TG TAAA AG A A CGACGCCAGGAGAAAACT CCAGGAGAAAACTGACCGGACAA TTTACG A AGC G TG GTTAATCTTGAGTTAATTTT GGGGCTGAACATTGT GT T TT AGA A G TA GAGT T T G T TTA C TTTTTTGTTGTTTTTTT TA TTAA . A . A . . . CAGAG . . C AGA GA GAGCA . . . G TATATCAACAAGTATGATATAAAATATATAATAAAATAATATGTACGGGGGAA AGCAGAT T . . . AT AA C C T . C T A A A T C TTA AGCT
blockSeqs : . . . . . . ATAATCTTGATACGAGTGGTGG . . . C . . . . . . . . TGGCCTATG T . . . . . . AC . . . . TAA . . . . AG G A . . . ATAA . . A A . . . . A C AA GAAAGT TA . . . . AT . . . AAAG . . C T . T TC T . A G . . . C TGTTTCA . . CTAGCTCATAA . . . . A . . ACA AATTTAGAAATTAAATGTTCA G . . . G . A . . TG T A AG . TTT . AAAA A AAAAGTTCTTTAC . . . . T . . T . G . . . . . . . . . . . AA . . G TGACAA AGAAA . . . T TGTAAGCTTAAG GAGAAGC . C . A . . TA TTAT . . . . T . TTATCT TA AGA . . . A . . . . . . C C A . . . . . TAATTATTAACAATATGTCAGACAAATATAATGTAGGAAGGAATAGCGACCAG . . . . . CT CA C . . . C T A . . . A . .
blockSeqs : . . . . . . ATAATCTTGATACGAGTGATGG . . . . . . . . . . . . TGCTATT . . . . . . . C . . . . GAA . . . . AA T A . . . ATTA . . G A . . . . A C AA GAAAGT A . . . . AT . . . ATAG . . C T . T T T . A G . . . A AGCGGGT . . TCAGCATGGAC . . . . C . . ACA ACATACAAAGTAAATTA G . . . T . G . . T . G AC . TTG . AAAA C AAAAGTGTTTA . . . . . . . . . . . . . . . . . . . . . A . . . TGA CTAG . . . T TTGTAAAT GAAAC . T . A . . A T . . . . . . TTTTC CT AG . . . T . . . . . . . . G . . . . . TAAAATATAGAATATGTAGGAAGGAATGCGACA . . . . . AA C C . . . C T A . . . A . .
blockSeqs : . . . . . . GTGG . . . . . . . . . . . . CTCTATG . . . . . . . C . . . . GA . . . . . G A . . . ATAA . . G . . . . . A C CT A A . . . . A . . . AG . . A T . C T G . A G . . . A GCGGGA . . TCAGCATGGAC . . . . A . . ACA G . . . T . A . . T . . . . TTG . AAA A AAAATCTTT . . . . . . . . . . . . . . . . . . . . . C . . . CCA TAG . . . . TGTAT GCC . . . . . . T T . . . . . . TTATT A TG . . . T . . . . . . . . TCCATGACAAAGAAA . . . . . . . G . . . T C A . . . . . .
blockSeqs : . . . TTGG . . . . . . . . . . . . TGCTATG . . . . . . . C . . . . GA . . . . . G A . . . ATT . . . . . . . . . C GT A A . . . . A . . . AG . . A T . C C A . A A . . . C ACGGGA . . TAAACATGGAA . . . . A . . ACA . . . . C . C . A . TTCTTTAC . . . . . . . . . . . . . . . . . . . . . A . . . GAG . . . . . . . . .
blockSeqs : GTGG . . . . . . . . . . . . TGTTATG . . . . . . . C . . . . AA . . . . . . . . . . . . . . . GT A A . . . . A . . . AA . . A . . C T A . A A . . . C ACGGGA . . TAAACATGGAA . . . . C . . A . . . C TTCTTTAC . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . GT . . . . . . A . . . AG . . . . . . T G . . . . . . C TGT . . TA . . . . . . . A CTCTTTAC . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . AAAAT . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : AAAAT . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . . C . . .
blockSeqCons : ************ ******* ATAATCTTGATACGAGTGGTGG************************ *** ****** ** ****************** ****** TGCTATG****************************************** *** ** *** GA**** ******** ** A** **** ****** ** GT A******** A*** ** ** ** ******* AG********************* ***** T*********** C* T****** A**** ** C******* ACGGGA************ TNAGCATGGAA************ A* ACA******** TG** ***** TTG*** AAGA* AAAATTCTTTAC* **** *** A** CGCA******************* TAG****** TGTAATA**************** GAGAC********** TA TTTTCT*************** TA **** **** ***** ** ***
originalCons : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGA------------------GT------------------GG------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTT------------------CG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-AA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATG-AA--A--TAAT-A--GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC-------A-AG------------ACA-AAA-----ATGGCAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGCATAT-T---TCGAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT---GG-A--TAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATA--T-AA-G---AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TA-AAAATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT------------------GACCT------------TGAC-------TTCAAGCT-A-G---CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA-------TTG---TAA--TT---GTGCGAAAAGGGA---------GCTATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG--T-TTAT-T-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
finalCons : NCATTACA--GGCAGGCAG-T-GATTA-TAA------------TAA-------ATGAATAATCTTGATACGAGTGGTGG------------------------GGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CTTTGCTATG------------------------------------------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAAGA----G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAAATACTAAGTGATA--------TAATA---GTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACAG---------------------ACA-AAA-----ATGGCAATACAGAAAATGGCTAT-----------CTACATTTACAAA-AATC-GCATATT------GAA-CGTA----AAATAATGTA--TTTG-TAACT-TAACAGAC-------TTTGCACGGGA------------TTTAGT-TACGACAA-TGAAAACCGATNAGCATGGAA------------TAGCGT-TATC--TAG-AAATTGTAATT-TTGA-C-GCT-TTACA--------AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATATG--AA-----AGAGCGT----ANTGGAAA-ATTG---ATACTAAAAAGTGAATAAG-TAAAGA-TAAGTAAAATTCTTTAC-CTG-AAAT--CA-G-GACAG-----G-AG-ACG-G----A-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----TA--T-T-ACTT------------------GACCTCGCA-------------------TTCAAGTAG------CGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGATGTAATA----------------GTGCGAAAAGAGAC----------TATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AGTTTTCT---------------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1111 1 111 111 111111 1 555555555555555555 4444444444444444444444444444444444444444444444444444444 111 111 222222222 222222 11111111 11 111 1111 555555555555555555 111111 1 11 2222222 1111111 1111111 11 444444444444444444444 1111 222222222222 111111 11111111 222222222222222222 111111111 1111 11111111111 4444444444444444444444444444444444444444444444444444444444444444444 111 333333333 222222 111111 222222222222222222222 11111 777777777777777777777777777 11 2222 111 666666666666666666666666 111 2222222222 11 11 111 1111111 333 1111 55555555555555555 11111 1111 22222 111 11 222 111 22222 1111 22222 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2222222 11 222 111 111 1111
lowQualScore : 11 8 8 8 11 0 0000 3 1 000 000 1 77 666666 1 5 77 5 5 444444444444444444 5 4444444444444444444444444444444444444444444444444444444 0 333 555 66 66 66 000000000 5 666 888 5 5 888 111111 5 66666666 66 77 99 4 222 0000 5 5 111111111111111111 5 6 1 3 999999 6 6 66 0 5 66 33 7777777 5 66 5 66 3333333 66 66 6666666 33 66 777777777777777777777 0000 3 0 777777777777 0 5 55 5 444444 5 1 5 77777 1 66 5 5 55555555 111111111111111111 4 5 0 222222222 66 0000 5 66 5 5 88 5 5 11111111111 7777777777777777777777777777777777777777777777777777777777777777777 1 6 111 77 4 5 4 8 8 999999999 3 111111 8 555555 6 888888888888888888888 3 33 2 2 00000 2 2 5 5 555 2 2 2 33 2 6666 33 2 33 6666 2 2 2 2 5 444444444444444444444444444 8 11 3333 8 8 0 0 444 8 88 666666666666666666666666 7 444 9999999999 11 3 11 111 8 8 0 11 9999999 8 0 8 8 8 111 0 8 7777 55555555555555555 99 11111 8 8 7777 1 8 8 0 8 55555 777 0 33 6 333 222 00000 8 7777 00000 6 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1111111 6 6 8 11 99 444 5 8 8 444 9 5 3 6 6 8 5 444 0 7777
lowQualScore : .. . . . .. . .... . . ... ... . .. ...... . . .. . . .................. . ....................................................... . ... ... .. .. .. ......... . ... ... . . ... ...... . ........ .. .. .. . ... .... . . .................. . . . . ...... . . .. . . .. .. ....... . .. . .. ....... .. .. ....... .. .. ..................... .... . . ............ . . .. . ...... . . . ..... . .. . . ........ .................. . . . ......... .. .... . .. . . .. . . ........... ................................................................... . . ... .. . . . . . ......... . ...... . ...... . ..................... . .. . . ..... . . . . ... . . . .. . .... .. . .. .... . . . . . ........................... . .. .... . . . . ... . .. ........................ . ... .......... .. . .. ... . . . .. ....... . . . . . ... . . .... ................. .. ..... . . .... . . . . . ..... ... . .. . ... ... ..... . .... ..... . ......................................................................................... ....... . . . .. .. ... . . . ... . . . . . . . ... . ....
lowQualScore : 00 0 0 0 00 8 8888 2 4 000 000 4 99 444444 4 7 99 7 7 333333333333333333 7 1111111111111111111111111111111111111111111111111111111 2 888 666 99 99 99 000000000 0 222 888 0 0 888 111111 0 11111111 99 99 44 3 999 6666 0 7 333333333333333333 7 7 0 2 222222 7 7 99 0 0 99 88 6666666 0 99 0 99 5555555 99 99 2222222 88 99 555555555555555555555 6666 1 2 000000000000 2 0 22 0 444444 0 2 0 88888 1 99 0 0 66666666 555555555555555555 4 0 9 888888888 99 6666 0 99 0 0 11 0 0 88888888888 3333333333333333333333333333333333333333333333333333333333333333333 0 7 777 99 0 7 0 0 0 222222222 2 666666 0 666666 7 111111111111111111111 3 99 9 9 00000 9 9 7 7 000 9 9 9 99 9 1111 99 9 99 1111 9 9 9 9 7 111111111111111111111111111 0 00 2222 0 0 8 8 000 0 88 222222222222222222222222 3 888 2222222222 00 8 00 888 0 0 8 66 0000000 0 8 0 0 0 444 8 0 0000 66666666666666666 88 44444 0 0 0000 4 0 0 8 0 00000 555 8 88 5 000 000 00000 0 0000 00000 7 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 7777777 7 7 0 00 66 666 0 0 0 000 3 7 5 7 7 0 6 000 8 0000
consensus : NCATTACA--GGCAGGCAG-T-GATTA-TAA--TAAATGAAT-A--ATCTTGAT-ACGAGTGGT---GGGGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CT-------------TCG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-GA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAA-ATACT-AAGTG--ATA--TAATT-----AGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC--A--GACA---------------------AAAATGG----CAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-AT------ATT-GAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT----GGAATAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATATG-AAT----AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TAAAG-ATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT-GAC-------------GT---CG--C----A-TTCA--AGCT--A-GCGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA--------T-G---TAA---TT--GTGCGAAAAGAGA--CT----------ATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG----TT-T-TCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
Reference ( family-7825 ) : NCATTACA--GGCAGGCAG-T-GATTA-TAA--TAAATGAAT-A--ATCTTGAT-ACGAGTGGT---GGGGAA---TTTTAACAT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CT-------------TTG--CT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACAATAA-GA---G-GACTTCC--------GGTTACTA--AAG--AAAAGGGGGGGGGGGGTAAGCAA--GAGA----CTA-CACTAGC-AGAT-------ATTA------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAA-ATACT-AAGTG--ATA--TAAT------AGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC--A--GACA---------------------AAAATGG----CAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-AT------ATT-GAA-CGT--A--AAATAATGTA--TTTG-TAACT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACGACAA-TGAAAACCGA---TNAG--C--AT----GGAATAGCGT-TATC--TAG-AAATTGTAATT-TTG-AC-GCT-TT----ACA----AAGAAACTGTAA------TATTAC-A---T----ACAA-----------AATA---AAAT---------GATTA-----CGTTC-CTA---TGCA--ATAAATCGCAA-AACGGAAAAAC-ATG-AATATG-AA-----AGAGCGT----ANTGGAAA-AT-TG--ATACTAAAAAGTGAATAAG-TAAAG-ATAAGTAAAA-TTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT-GAC-------------CT---CG--C----A-TTCA--AG-T--A-GCGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA--------T-G---TAA---TA--GTGCGAAAAGAGA--CT----------ATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACT---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGACT--ATATGGGGAAATTA-AG----TT-T-TCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAGGACACT-AATTGATTTTCTCAGATT-T-----CAG---AAAC--AAAACGCC--AAAAAAAGGGG-G-CAGAC-----TA-C----TCG-----ACAA-AG---T--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGAAG------GAA----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-A-GTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAA
gi|1 : ACA--GGCAGGCAG-TAGATTA-TAAAGCAAATGAAT-ATAATCT-GATTACGAGTGGTTGGGGGGAGATTTTTTGACAT--AATAAATTGTGG-GAAAATTATACAGC-A-ATATTGGGGATTGTTTGATTTAATAAAAAATT-TTATCCTGTCT-------------TCG--TT-----------ATGCGGCTAATGATAGGAATTTCT---ATTAAACGGTCACAA--ATG--TC---------A-GA-C-TGCCTA-T-TTAC---ACAATAA-GAA--G-GACTTTCCCCCTCCGGGTTACTAGAAAG--AAAAAAAGGTTGGGG--AAGCA---GAGAACTTTTA-CACTAGCCAGAT-------AT-G------ATAAAA-CTTAATGAAACAAAAAGCAATAAACCATACTAATTCTTG-T-TAAAGTTAGCACAA-ATAATAAAGTGAAATA--TAAC-------GTTACAGTAT--TGGTCCAA-----A-GATGAGGGGAGAAAGCGTTGGAACGTTATAAAC--A--TACACTAAGAAGAAGAGCACAACAGAAGACGGATGGCAATACTGAAAATGGCTACATGGTAAATCTCTACATTTAAAAATAATGCGCAAT------ATTCGAACCGTTAA--AAATAATATATTTTTGTTAACTATAA-AAA--CAGCTTTTTGC----A-CGGAGG----ATTTTAGT-TACGACAACTGAAAGCCAAACTTTAA--CAAAT----GGAATAGCGTATATC--TAGAAAATTGT-ATT-TTGCACAGCTGTTTCTAACACAATAAGAAA--GT-A------TATTAT-----T----ACAA-----------GATA---AAA
gi|10 : tcacgcattgttttttgtgatgttgtggtggagatgaggaatctggtggatgttgtgagcggtgaaatctgaaaatcaggaacaggggagaggagagagaagaccgtgaaaatgtgtaaattccgtgaactttttattaccttaacgtcgaggaaaactcactgtacatgcataaacatttcataatcacaacagcaaaataatacccaaaatgctctgtaaaaggtttgaaaacatgcggtggcatcaatattcatgccgcgggaccaccattaaaacaatagttttacacattgtttgattaatgattcaaacaaaaaacagtgtattataaaaacacagaacaaccatagtttgtaaacaaaagcatgtggtgcaaggacaccttacacaaatcaatgttaaagattacttcacaattaaAGA----CTA-CACTAGC-AGAT-------AT-A------ATAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-AAAAGT--GCACAA-ATACT-AAGTG--ATA--TAATTATAATAGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------AC--ATAGAGA---------------------AAAATGG----CAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-AT------ATC-GAA-CGT--A--AAATAATATA--TTTG-TATGT-TAACAGC--C-----TTTGT----G-CG--GG----A-TTTAGT-TACGACAA-AGAAAGCGAA---CTAGCTC--AT------AACAGTGT-T-TC--TCG-GAAaatctagaaatttgaatatcaacatcatttcgcattat
gi|11 : GGAAATTG-AGGATGTTATGTCA-----------TAACATATTAT--CAA--GG-ATGGTTGG-ATTGTTCTATTGATTTTTAAGGACACTGAATTTATTT-CTCATATTGT-----CATTTTACACGAAAAATGCC--AAAAAAAGGGGCG-CAGAT-----TAGCGTAATTGTCCATACAA-AGAAAT--------AC------------GATAT-------AAA-------------T--T-ATGT-ACGGAGGAATGTGAA----------CAT-------CCTTTAAA-TAAACTAGTTTGTATGTTCTCGAGAAAGTTTCAAATGTTGTTAGA-GTTT-TATTC-A-TCTTTTTAAAACTTA--A------GTAGAAATTTGGACAACAT--TAG-Aaacgggagatcattttgaatccatttta
gi|12 : GTAAAA-T-------CTG-CGAT--CT-G-GCGCG-----G-AG-CCG-GA-AT---T-GT-C-GA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT-GACGTCCAGGAGAAAACTGACCGGAC----AATTCA--AGCT--A-GCGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGA--------T-G---TAA---T---GTGCGAAAAGAAA--CT----------ATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTG-CCGTGGGAAATTACG---T---ATA-ACGCGGACAGA-CAGG-TAAA-TGAC---ATAgatg
gi|13 : tatcacgatgattttgtggtgtaatatttgttgattaagctctttgggtcgttgtcatgttgttGT--GTACAATATAAA-AGATG--AAAGTTAATT-----AGTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC--A--GACA---------------------AAAATAA----CCATGAAGAAAATAGTTA------------------------A-AAT-TGC-AT------ATT-GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TGTTTCA-TTTA---TACAACAA-TGGAAATCGA---TCAG--C--AT----GGACTAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TA-TACAA---TGAAGGCAA-----------AATA---
gi|15 : A-----------AATA---AAA--------------------CGTTC-CTA---TGCA--ATAATTTACAA-AACGGAAAAGT-ATG-AATACGTAATGTTTACAGCGT----ACTGGAAA-A----------------GTGAATAAG-TAAAG--T---------TTCTTTACCTG-AAAT--CA-G-GACAA-----G-AG-ACG-GA-AT---T-AT-A-AA--TT-C----G--TG-ACT--T----T-C-T-T-GCTT-GAtgtttgatttgtcgtagaaagatatggaat
gi|16 : aataaataaatttccgacaattgatgaacgcgaacgcgaatgtaagactatttaaattctcaaatttagGT--GTACAATATAAA-AGATG--AAAGTTAATT-----AGTAACA-TGT--T-GTC--A-----ATGATGA--GGACAAAGTGT--GAAC-------AC--A--GACA---------------------AAAATAA----CCATGAAGAAAATAGTTA------------------------A-AAT-TGC-AT------ATT-GTT-TGT--A--AAATAGTGTA--TTTG-TAACC-TAACCGA--A-----TTTGC----------TG----T-TTCATTATACAACAA-TGGAAATCGA---TCAG--C--AT----GGACTAGCAT-TATC--CAG-AAATGGTAATT-TTG-AC-ACT-TT----ACA----AAGAAACTGAAA------TAtgtccaggagaaaagtgaccggacaa
gi|17 : TTAATCTG-AAAT--CA-G-GTAAG-----G-AG-ACGAGA-AT---T-GT-AGAA--TTAC----G--TG-ACT--T----T-A-T-T-AC-T-GAC-------------GT---C
gi|18 : catatttacatttgcatgatataacctttgttgtggtatgttgagagtgaTAT-------AAA------------------ATGTGAC------------A----------CAT-------CCTTTAAG-TAAACTAGTCT-T-TGTTCTC--AAAAATTCCAAATGTTGTTA-AAGTTTCTATTT-A-TC---TAAAAACTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAcagcaaactaataaaaccataaatgtcttctgtagaaggatttgaaagcatgcgtggccacaataaactacattgccatggacaccattaaaacaataatttacatgtttgatattac
gi|19 : tatgtccatgataaaaaaaaaaaaaaaaagagAAT--CA-G--ACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT-GAC-------------atggtgatagtgcatatatgata
gi|2 : cgtgtgtgcgtgcggctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagcCATTACA--GGCAGGCAG-T-GAGTA-TAA--TAAATGA----------------------GT---GGGGAA---TTTTAACTT--AA------ATGG-GTAAATTA-AC--C-A-AT------------------TGATAGAAAAAT-C------G-CT-------------TTG--CT-----------ATT-----------AAGGAAGGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CA-T-TTAC---ACTACAATAA---G-GACTTCC--------GGTTACTA--AAG--AAAGGGGGGGGGGGGGTAAGCAA--GAGA----TTA-CACTAGC-AGATCTAATAAATTAATAGTCATAAAA-CT-AATAAAACAAAAAGCAAC-------ACCAATTGTAG-T-TAAGGT--GCACAA-ATACT-AACTG--AT---TTAT------AGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------ACAAA--GACA---------------------AAAATGA----CAATGCAGACAATGGCTA-----------TCTACATTGACAAA-TAT-CGC-ATATATACATT-GGA-CAT--A--TAATAATGTA--TTTG-TAACT-TAACGGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TATGACAA-TGAAAACCGA---T-----------------ATAGCGT-TATA--TAG-AAATTGTAATT-TTG-CT-GCT-TT----ACA----AAGAAACTATAACATTGTCATTAC-A---T----ACAA-----------AGTA---AAAT---------GATT------C-TTC-CCA---TGTA--ATAAATCGCAA-AACAGAAAAAC-ATG-AATATA-AAG----AGAGCGT----AGTGGAAA-AT-TT--ATACTAAAAAGTGAATAAG-TAAAA-ATAAGTAAAACTTCTTTACCTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--A----C-A-A-T-TCGT-GAC-------------TT---TG-------A-TTCA--AGCT--A-GCGTCT-CCTGTTTAGTCA---T-TGAGTT-AATCTTGTCGAGTTAATCTT-GAGTTAATT-TT--GTGCGAAA--AGC--CT----------ATTATTG--TAATTGAAATT--AAAA--CAACACAA-TTTA-CTGTGGGAAATTACTGAGT---ATA-ACGCGGACAGT-CGGG-TAAA-TGAC---ATAAGGGGAAATTA-AG----TT-T-TC------------TAACAAATTATACTAATTAA-ATG-ACGG-CTT----CATTGATTTG-GAGGACACT-AATTGATTATCTCAGATT-T-----CAG---AAAC--AAAACGCC-----AAAAGGGG-A-CAGAT-----TA-C----TCG-----ACAA-AG---T--------CC---------------------------------------------ATG--ACAAAG------AAA----------CAT-------CCTATAAG-TAAACTAGTCT-T-TGTTCTC--AAAACTTCCAAAT----------GTTTCTATTT-A-TC---TATTACCTTACGAAATTGTGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCAAACGTTTCT---AAAATTAAAGA----AATTGTCAAAgcccaaggaaaagatgctgtcaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggttggaaacacgcaatggcacaaatat
gi|20 : gAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-GCTT-GAC-------------g
gi|21 : ctgtctttgtgttgtgtataagttctttttgttgctatgatgtgatcagc--ATAACTGACAA-AATAGATCGAC-ATG-AATATG-AAT----AGAACCT--------GAAA-AT-TG--ATGCCAAAAAGGAAAT----TAA----TA--T-----TTCTTTACCTGCAAAT---A-G-CGCAG-----A-AA-ATG-GATATCAGT-GT-A-AT--TT-C----A--GG-ACT--TTAAAT-A-T-T-ACTT-GAC-------------GT---Cgcccaaggaaaagatgctgtacaagacaaacatttataatcacagaaataataccaacaatgcccctgtaaaggtttgaaacacgcaatggcacaaatattattatca
gi|23 : AT-ACAAATGAT---TGGGAA---GTTCA-CATTAAA------ATGATGGAAAATA-AT--T-A-TT------------------TAATACAAAATT-C------G-CT-------------TCT--CT-----------ATG-----------AGGAATTATT---CTT---TGG--ACAA--ATGATTCTTTATTTTAA-AA-CAT---CA-T-TT-----GCAATAT-CACTGG-GACTTCC--------GGTTAATG--AAaagagacaaaatatcctaaaaattcga
gi|24 : tT-TACGACAA-AGAAAACCGA---TAAA--C--AT----GGAATAGCAT-CATA--TAA-AAATTAAAATT-GTG-AC-ACT-TT----ACA----AAGAAGCTGTA-----------AC-A---T----ACAA-----------AGTA---A-------------ATTA-----TATTTGATT---TGTAGTATAAA--GCAA-A--GGAA
gi|25 : ACTTA-AAAATTGTGTGAGAACATGAACAAAAT-ATAGAAATG-TGTCAAAAGTCTCCTTAAAAATTAAAAAAGCTAATTGTCAAAttttaagataaa
gi|26 : -CAGAC-----TA-C----TCG-----GCAA-AG---T--------ATATCAACAAGTATGATAT-------AAAATATATAATAAAATAAT-ATGT-ACGGGG------GAA----------TATAGCAGATCCTTTAAG-TATACTAGTTT-aagggtaatgtgcctaat
gi|27 : ATCTG-AAAT--CA-G-GACAG-----G-AG-ATG-GA-AT---T-GT-A-AA--TT-C----G--TT-ACT--T----T-A-T-T-ACTT-GAC-------------GT---C
gi|28 : tttgttgtgatatcgtaatgtggaA---AAAT---------AATTA-----CGTTC-CTA---TGCA--ATAGATTGTAA-AACAGAAAAAcaggagaaaa
gi|29 : gtacgaattgatctaaattctttcagtttagACTTCC--------GGTTACCA--AAGGCGAAAGGGGGAAGGATGTAAGCAAATGAGA----TAA-CACTAGC--GAA-------ATT--------TAAAA-tctaagcttacgt
gi|3 : GTAAAA-T-------CTG-AAAT--CA-G-GACAG-----G-AG-ACG-GA-AT---T-GT-A-AA--TT-C----G--TG-ACT--T----T-A-T-T-ACTT-GAC-------------GT---Cagaaat
gi|3 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatCATTACA--GGCAGGCAG-T-GATTA-TAA--TAAATGAAT-A--ATCTTGAT-ACGAGTGGT---GGGGAA---TTTTGACAT--AA------AAGG-AGAAATTA-AC--C-A-ATGCAT--------------TGATAGAAAATT-CGCTTT-G-CTATGAAGGATGTTCTCG--CTTGTATGGCATAATG-----------AAG-ATGGCTT--ATT---CGG--AAAA--ATG--TC---------A-GA---T---CA-TGTTAC---ACAGTAA-GA---G-GA-TTCC--------GGTT--TA--A-G--AAA------GGGGGGTTAAG-AA--GAGA----CTAACACTAG--AGAT------------------TAAAATCT-AATGAA-TAAAAAGCAAC------TACTAAT-CTAGATATAAAGT--GCACAT--TACT-AAGTG--ATA--TAAT-------GTTACA-CATAAT-GTG--ATAAAAA-GCTGA--AGACAAAGTG---GAA--------AC--A--AATAG--------------------AAAATGG----C--TACAGAAAATGG-TA-----------TCTTAATTTACAAA-AAT--GC-AT------ATC-GAA-CGT--AGAAAATAATATA--TT-A-TAACT-TAACAGATGC-----TTTGC----AGCG--GG----T-TTTGGT---CGA--A-TGAAG--CGA---TTTA--C--ATTGGGGAAATAGGGT--ATC--TAG-AAATTGTAGTTATTG--C-GCT-TC----A-------AGAAAATATAA------TACTAC-AAGTT----AAAATGATTTGAACGAATATCTAAATTAGAGTTTAGATTATAATACGTTC-CTAAAATGCA--GAAAATTGTTATAACCAAAAAACCATGGAATAT--AA-----AGA-CGTTGACAGTGGAAATATATGGAATACTAAAAAGTG--TAAG-TAAA--AGAA-TAAAA-GTGTTTA-CTG-AAAG--TA-G-GA-GG-----A-AG-A-G-GA-A----T-GT-A-AA----------G---G-ACTTGT----T-G-T-TAACTT-GAC-------------GT---Ccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtggtggggaattttgacataaaaggagaaattaaccaatgcattgatagaaaattcgctttgctatgaaggatgttctcgcttgtatggcataatgaagatggcttattcggaaaaatgtcagatcatgttacacagtaagaggattccggtttaagaaaggggggttaagaagagactaacactagagattaaaatctaatgaataaaaagcaactactaatctagatataaagtgcacattactaagtgatataatgttacacataatgtgataaaaagctgaagacaaagtggaaacaaatagaaaatggctacagaaaatggtatcttaatttacaaaaatgcatatcgaacgtagaaaataatatattataacttaacagatgctttgcagcgggttttggtcgaatgaagcgatttacattggggaaatagggtatctagaaattgtagttattgcgcttcaagaaaatataatactacaagttaaaatgatttgaacgaatatctaaattagagtttagattataatacgttcctaaaatgcagaaaattgttataaccaaaaaaccatggaatataaagacgttgacagtggaaatatatggaatactaaaaagtgtaagtaaaagaataaaagtgtttactgaaagtaggaggaagaggaatgtaaaggacttgttgttaacttgacgtcaggagaaaactgacc
gi|30 : cacgtagttgtgatgttatttatttgttgcttaagttattttattagatgtcatgtggatgtaaaatctgaaatcaggacaggagacggaattgtaaattcgtgactttattacttgacgtccaggagaaaactgaccgtacaagacaaacatttataatcacagaaataataccaacaattttgaaacatgcggtggcacaatacttacatatgcgtggacaccattaaaacaatagttacatgtttgattatgtacagattcaaacagtattaaaaacagacactgtaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaGATTGCTTACATTAA-CAG--ACCC--ATC--AC---------ATGG-C-T---TT-T-TTAC---ACATTCA-GA---GAGATTTCC--------GGTTAaggagaaaactgacc
gi|4 : tGTAAAA-T-------CTG-AAATTTCA-G-GACAG-----A-AGAACG-GAGAT---T-GTAA-AA--TT-C----G--TC-GCT--T----T-AGTAT-ACTTGGAC-------------CT---Catga
gi|4 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttCATTACACAGGCAGGCAGGT-GATTAATAA--TAAATGAATTA--ATCTTGATGACGAGTGGT---GTGGGA---TTTTACAAT--AA------ATGGCGGAAATTA-AC--CCA-AG------------------TGATAGAAAATTTC------G-CT-------------TTGGCCT-----------ATG-----------AAGGATTG-T---ATT---CAG--ACAATGA-G--TC---------A-GAAC-T---AAGT-TTACCATACACTAA----------CTTCC--------GGTTACTA--AAG--AAAAATGGGGGGG----AAGCAA--GAGA----CTA-CACTAAC-AGAT-------ATTA-------TAAAA-CT-AATGAAACAAAAAGCAAC------TACTAATTCTAG-T-TAAAGT--GCACAA-ATACT-AAGTG--ATA--TAAT------AGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAATGT--GAAC-------ACATA--GAGA---------------------AAAATGG----CAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAT-CGC-AT------ATT-GAA-CGT--A--AAATGATATA--TTTG-TAGCT-TAACAGA--C-----TTTGC----A-CG--GG----A-TTTAGT-TACtaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattacattacacaggcaggcaggtgattaataataaatgaattaatcttgatgacgagtggtgtgggattttacaataaatggcggaaattaacccaagtgatagaaaatttcgctttggcctatgaaggattgtattcagacaatgagtcagaactaagtttaccatacactaacttccggttactaaagaaaaatgggggggaagcaagagactacactaacagatattataaaactaatgaaacaaaaagcaactactaattctagttaaagtgcacaaatactaagtgatataatagttacatattgtcaagatgaggacaaaatgtgaacacatagagaaaaatggcaatacagaaaatggctatctacatttacaaaaatcgcatattgaacgtaaaatgatatatttgtagcttaacagactttgcacgggatttagttac
gi|5 : tcacgtggtttttgtgatgttatatttgttgcttaagttcttttggtagttgtcatgttgttgtaaaatctgaaatttcaggacagaagaacggagattgtaaaattcgtcgctttagtatacttggacctctaggaaaaactgaccgttcgaagacaaatttattgataccgaaataatacaaaatgtttctattaaaggtttgaaacatgccggtgcacaataaattacaagtgcgttggacaccattaaaacaatatgacatgttcttgaccattacagattcaaacatgtatgaagaaactagagcctgtaaaccaaagcaagtgtggtagaggacacctttaaaacaagtgttagaagatattaTAAATAAGGTAAAA-ATACATAAAAGTTCTTTACCTG-AAAT--CATG-GACAGT----G-AG-ACGTGA-AT---TTGT-A-AAATTT-C----GAGTGGACT--T----T-A-T-T-ACTTCGACGCCAGGAGAAAA-CTGACCG--TGACAA-TTCA--AG-TTTACGCGTTC-CCTGTTTAG-CA---T-TGAGTTGAATCTTGTCGA--------TTG---TAA---AT--GTGCGAAAAGAGAAGCT----------ATTATT---TAAT-GAAATT--AAAAGACAACACAAATTTAGCTG-GGGAAAG-ACT---T---ATA-ACGCGGAC-GA-CAGG-TAAATTGACT--ATGTGGGG-AATTA-AG----TT-A-TCT-----------TAACAAATTATACTAA--AG-ATG-TCGG-CTT----TATTGATTTG-AAAGACACT-AATTGATTTTCTCAGATT-T-----CAG---AGAC--AAAACGCC--CAAAAAGGGGG-GACAGAC-----TA-C----TCG-----ACAA-AG---T--------A
gi|5 : acagaAA-AA---T--------AA------------AATAT-------AGA-------------A--T-ATGT-AGGAAG------GAATGCGACA---CAT-------CCTTTAAG-TAAACTAGTTT-T-TGTTCTA--AAAAAATCCAAATGTTGTTACA-GTTTCTATTC-A-TC---TAAAAACTCACGAAATTGCGTGGGAACATGGACAAAAT-ATAG-AATA-TGTCCAAAGTTTCT---AAAATTAAAGA----AATTGTCAAAttattaacacatattgtccatgacaaaaaaataaaatatagaatatgtaggaaggaatgcgacacatcctttaagtaaactagtttttgttctaaaaaaatccaaatgttgttacagtttctattcatctaaaaactcacgaaattgcgtgggaacatggacaaaatatagaatatgtccaaagtttctaaaattaaagaaattgtcaaaatggtgaatgtgcatatatga
gi|6 : acagataaataaggtaaaaatacataaaagttctttacctgaaatcatggacagtgagacgtgaatttgtaaaatttcgagtggactttattacttcgacgccaggagaaaactgaccgtgacaattcaagtttacgcgttccctgtttagcattgagttgaatcttgtcgattgtaaatgtgcgaaaagagaagctattatttaatgaaattaaaagacaacacaaatttagctggggaaagacttataacgcggacgacaggtaaattgactatgtggggaattaagttatcttaacaaattatactaaagatgtcggctttattgatttgaaagacactaattgattttctcagatttcagagacaaaacgcccaaaaaggggggacagactactcgacaaagtattattaacacatattgtccatgacaaaAAAA-T-CTTT----G-AAAT--CA-GAGACAG-----GCAG-ACG-GA-AT---T-GT-A-AA--TT-C----G--T--ACT--T----TAA-T-T-ACTT--AC-------------Catggtgaatgtgcatatatga
gi|6 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagCATTACA--GGCAGGCAG-T-GATTA-TAA--TAAATGAAT-A--ATCTTGAT-ACGAGTGAT---GGGGAA---TTTTAATGT--AA------ATGG-GGAAATTA-AC--C-A-AT------------------TGATAGAAAATT-C------G-CT-------------TTG--CT-----------ATG-----------AAAGATTGCT---ATT---CGG--ACAA--ATG--TC---------A-GA-C-T---CC-T-TAAC---ACAATAG-AA---G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGGGGGGTAAGCAA--GAGA----CTA-CACgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactacattacaggcaggcagtgattataataaatgaataatcttgatacgagtgatggggaattttaatgtaaatggggaaattaaccaattgatagaaaattcgctttgctatgaaagattgctattcggacaaatgtcagactccttaacacaatagaaggacttccggttactaaagaaagggggggggggtaagcaagagactacac
gi|7 : gtggttgtgtggttgttatgtttattgcttaagttcttttggtagttgccattgttgagaaaatctttgaaatcagagacaggcagacggaattgtaaattcgtactttaattacttaccgtcaggagaaaaactgacccgtacaagaccaaacatattatacaatcacagaaataatcaacccaacaagatgtctctgtaaaggtttgtaaacatctggcactgaataattacatgtgcgtggacaccattaaaacaatagttacatgtttgattacagattcaaacagtattaaaaactgacactgcaacaaaagcatgtgtgcaaggacacctttaaacaatgttaaagattactaTTGTAATT-A-G-AC-TAT-CT----A---------AAACTCTAA------AATT-------T----A-GA-----------AATT---AAAT---------GTTCA-----GGA-C-CTA---TGCA--ATAAATCGCAA-AATCGAAAAAC-ATG-AATAT--AA-----AGAGCGT----ACTGGAAA-AT-TG--ATACTAAAAAGTAAATACA-TGTAGTATAAGT-----CTCTTTACCTG-AAAT--CA-G-GACAGTCCCTG-AG-ACG-AA-AT---T-GT-A-AA--TT-CGTGAG--TG-ACT--T----T-C-T-T-GCTT-GAC-------------GT---C---C----A-TGCAGGAG-A--A-AAGTGA-CCAGACGATTCAAGCT-TGAGTT-GATCTTTTCGA--------T-G---TAAGCTTAAGGTGCGACAAGAAA--CT----------ATT
gi|7 : taaaaagtaaagtgact--GTGCGAAAAGGGG--CTGAACATTGTTATCATTG--CAATCGACATTTTAAGA--CAGCACAA-TTTA-CTATGGGGGTTT-CT---TTATATA-ACGCGGAGAAA-AAGGGCAAA-TGACTTAATATGGGGAAATTA-AG----TT-T-TTTGTTGTTTTTTTTAACAAAGTACTCTAA--TG-ATG-TCGG-CTT----CTTTGGTTTG-TATGACACT-AATTGATTTTCTCAGATT-ttaaaaggtgcgaaaaggggctgaacattgttatcattgcaatcgacattttaagacagcacaatttactatgggggtttctttatataacgcggagaaaaagggcaaatgacttaatatggggaaattaagttttttgttgttttttttaacaaagtactctaatgatgtcggcttctttggtttgtatgacactaattgattttctcagattctc
gi|8 : taaaaagtaaagtgactttgtaattagactatctaaaactctaaaatttagaaattaaatgttcaggacctatgcaataaatcgcaaaatcgaaaaacatgaatataaagagcgtactggaaaattgatactaaaaagtaaatacatgtagtataagtctctttacctgaaatcaggacagtccctgagacgaaattgtaaattcgtgagtgactttcttgcttgacgtccatgcaggagaaaagtgaccagacgattcaagcttgagttgatcttttcgatgtaagcttaaggtgcgacaagaaactattttaaaag----A-TTCA--AG-T--A-GCGTCTACCTGTTT-GTCA---TGTGAGT---ATCTTGTCGA--------T-G---TA----T---GTGCGAAA-GAG----T----------ATTATTGGTTAATTGAAATT--AAA---CAACA-GT-TTTA-CTGTGG--AATTACT---T---ATATACG-GGATATATCAGG-TAAA-TGAC---ATATGCGGAAATTACAG----TT-A-T-T-----------TAA-AAATTA-ACTAA--AGAATG-TCGGACTT----TTTCGATTTG-AAGGACACT-GATTGATTTTCT-AGATT-TCAGAGCAG---AAGC--AAAA-GCCAGAAAAAAAGGGG-G-GGGGCGAGCATA-C----TCG-----ACAAGAG---TAATTATTAAC------------AATATGTCAGACAAA-------------TA-TAATGT-AGGAAG------GAATAGCGACCAGCAT-------CCTTTAAATTAAACTAGTC--T-TGTTCTC--AAAA--TC--AATGTTGTTA-C-ATTTGTATTTCATTC---TAAAGACTT-TGAAATTG-GTGGGAAC--GGA-AAAATAATAG-AATATTGTCAAA--TTTTT---AAAATT-AAGA----AATTGTctc
gi|9 : aca-A--ATCTTGAT-ACGAGCGGT---GGGGAA---TTTTAACAT--AA------ACGG-GGAAATTA-AC--C-ACAT------------------TGGTAGAAAATT-C------G-CT-------------TTG--TT-----------ATG-----------AAGGATTGCT---ATT---CGG--ACAA--ACG--TC---------A-GA-C-T---CA-T-GTAC---ACAATAA-GAA--G-GACTTCC--------GGTTACTA--AAG--AAA--GGGGGGAGGGGTAAGCA-----------------CCAGC-AGAT-------AT-A------ATAAAA-CT-AAT-----------CTAC------TA-TAATTCTAG-T-TAAAGT--GCACAA-ATACT-AAGTG--ATA--TAAT------AGTTACA-TAT--T-GTC--A-----A-GATGA--GGACAAAGCGT--GAAC-------AC--A--GACA---------------------AAAATTA----CAATACAGAAAATGGCTA-----------TCTACATTTACAAA-AAG-CGC-AT------ATT-GGA-CG--------------------TG-TAACT-TAACAAA--C-----ATTGCACGTA-CG--GA----A-TTTAGT-TATGACAA-TGAAAACCGA---TAAA--C--AT----GGAATAGCGT-TATCTATAG-AAATTGTAATT-CTG-CC-GCT-TT----ACA----AAGAAACTATAA------Ta
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TCTGTAAAAGGTTTGAAACATGCGGCTGGCACAATAAACTAAATGCCGCTATGGACACCTTTTAAAACAACAGTTACATGTTTGATTACAGATTCAAACAGTATTAAAAACAGATACTGGTACAAAAAGCATGTGTTGCAAGGACACCTTTAATTTACTTACATTACAACACCAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
Unaligned ( gi|22 ): TCCGGAGAAGCTACGTACAGACAAAATTTAATCACCGAAATCCAACTCTCCTGTAAAGTTTTAAACTTGCAGTGCACATAATTACAGTGCATGACAACATCAAAAATATTCAGTTATTACAATTCAACAGATTAAAAACAGACACAACAAACAGGTGCAAGGCAAACC