lowQualScore : 2222222222222222222222222222222222222222222222222222222222222222222222222222 3333333333333333333333333333333333333333333333333333333333333333333333333333333333 11111111111111111111 1111111111111111111111111111111111111111111111 111111111111111111111111 1111111111
lowQualScore : 2222222222222222222222222222222222222222222222222222222222222222222222222222 222222 333 1 1 2 33 33333 555555555 111 333 22 333 1 8888888888888888888888 11 444444444444444444444 1 11 11 9999999999999999999999999999999999999999999999999999999999999999999999999999999999 33 1 1 11 2 11 11 1 22222 22 1 2222222222222 3333333333 11 11 444 1 2 1 222 7777777777777777777777777 6666 4444444 1 444444 4 1 4 55 77777777777777777 33 33333333333333333333 666666 4 333333333 2 44444 22 11 1 1 2222 5555555555555555555555555555555555555555555555 1 333333 22 1 3333 2 7777777777777777 2 2 2 666666666666666666666666 2 11 3333 9999999999999999999 2 2 77777777 222222222222222 2 22 2 2 2 222 3333333 555555555555555555 1 333333333 44444 1 2222 11 1 1111 44444 11 1 1 33 11 11 1 2 888888888888888888888888888888888888888888 1 1 11 22 4 2 22 2 1 1 4444 222 222 22 6666 2 6666 1 1 22 66666666666666 2 44444444444 333333 2 2 1 1 2 4444 4444444 22 2 222 2 777 22 4 22 1 11 11 1 44444 1 1 1 22 111111 5555555555555555555 1 11111 44444444444444444 22 1 777777777777777777777777777 2 666666666666 1 1 11 222222222222 2 0000000000 1
lowQualScore : 3333333333333333333333333333333333333333333333333333333333333333333333333333 444444 555 3 3 6 66 6 77777 111111111 0 111 000 33 333 0 3333333333333333333333 7 44 777777777777777777777 4 3 88 88 8888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 2 3 33 6 44 0 3 0 00 2 33 0 55555 3 2 6 44 0 8888888888888 4444444444 1 11 00 6 0 111 3 3 7 777 4444444444444444444444444 6 1111 6 8888888 5 222222 6 0 5 0 55 6 99999999999999999 00 88888888888888888888 666666 0 888888888 3 0 7 3 66666 00 88 6 0 6 0 6 0 0 0000 0000000000000000000000000000000000000000000000 3 444444 1 44 0 11 0 3 4444 0 4444444444444444 0 0 0 2 4 555555555555555555555555 0 4 99 5555 2 6666666666666666666 0 8 44444444 555555555555555 0 66 4 0 3 4 0 0 111 8888888 3 333333333333333333 2 5 111111111 3 88888 0 4 0000 1 88 3 9999 8 11111 8 6 2 6 2 44 22 0 0 33 33 2 2 00 0 0 222222222222222222222222222222222222222222 1 3 7 7 3 1 8 3 77 77 0 0 22 2 0 5 5 6666 888 000 6 77 2222 4 0 6 66 3 1111 5 5 4 77 77777777777777 0 66666666666 4 3 444444 4 0 0 0 5 8 2222 3 3 5555555 77 888 2 0 2 000 0 000 11 6 0 44 2 3 44 33 7 00 4 0 2 2 55555 0 0 0 33 555555 9999999999999999999 0 44444 88888888888888888 11 3 444444444444444444444444444 55 2 4 0 88 999999999999 5 5 88 666666666666 0 3333333333 7
lowQualScore : ............................................................................ ...... ... . . . .. . ..... ......... . ... ... .. ... . ...................... . .. ..................... . . .. .. .................................................................................. .. . . .. . .. . . . .. . .. . ..... . . . .. . ............. .......... . .. .. . . ... . . . ... ......................... . .... . ....... . ...... . . . . .. . ................. .. .................... ...... . ......... . . . . ..... .. .. . . . . . . . .... .............................................. . ...... . .. . .. . . .... . ................ . . . . . ........................ . . .. .... . ................... . . ........ ............... . .. . . . . . . ... ....... . .................. . . ......... . ..... . . .... . .. . .... . ..... . . . . . .. .. . . .. .. . . .. . . .......................................... . . . . . . . . .. .. . . .. . . . . .... ... ... . .. .... . . . .. . .... . . . .. .............. . ........... . . ...... . . . . . . .... . . ....... .. ... . . . ... . ... .. . . .. . . .. .. . .. . . . . ..... . . . .. ...... ................... . ..... ................. .. . ........................... .. . . . .. ............ . . .. ............ . .......... .
lowQualScore : 0000000000000000000000000000000000000000000000000000000000000000000000000000 000000 000 3 3 7 77 7 00000 888888888 2 000 000 88 000 0 8888888888888888888888 3 77 777777777777777777777 0 3 33 33 5555555555555555555555555555555555555555555555555555555555555555555555555555555555 55 0 3 00 0 88 0 2 2 00 5 88 0 00000 2 5 5 88 0 3333333333333 7777777777 0 00 33 7 7 333 3 3 3 000 0000000000000000000000000 0 0000 0 0000000 0 000000 0 0 0 0 00 0 00000000000000000 00 00000000000000000000 000000 0 555555555 0 0 3 7 33333 77 33 7 0 5 2 5 2 0 2222 0000000000000000000000000000000000000000000000 3 000000 0 33 7 77 7 3 0000 0 5555555555555555 0 0 0 5 0 555555555555555555555555 0 0 55 0000 5 0000000000000000000 0 5 00000000 000000000000000 0 00 0 0 0 0 0 0 000 0000000 0 555555555555555555 5 0 555555555 0 00000 5 0 3333 0 33 3 3333 3 33333 3 7 5 8 0 55 22 0 0 88 88 2 5 77 0 0 222222222222222222222222222222222222222222 0 7 3 3 3 0 3 3 00 55 0 0 00 5 0 0 5 0000 555 555 0 55 0000 0 0 0 55 0 0000 5 0 0 55 00000000000000 0 00000000000 0 0 000000 0 0 0 5 5 5 5555 0 0 0000000 55 555 5 0 5 555 0 000 00 0 0 00 3 2 00 22 2 55 0 0 5 5 55555 0 0 0 22 555555 5555555555555555555 0 33333 77777777777777777 00 3 000000000000000000000000000 55 5 0 0 00 555555555555 0 5 55 000000000000 0 0000000000 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGG-TAGATGANNAAATTGTTTNCCGGATTTT-----ACTTTGCATGTCACATTTA--TAATTTAATCATGGCTTTC--ATTCATTCATTTCTTCCATCCTTTTT-ATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATA---T---ACAAAGGGTA-A-CTATAA--TTTTACCATTATCGAGTG-AC-----ATAC-AAATAC---AC-ATAGAACATGAATTAAAATAAATGATAG------ATTATA---T-CT-CTCANA-AA--CAAGAA--GGTAAAAGAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGCTTT-CGGATTGTGACACACAAGGAAAAAACACACTTAATAGTG-GAAAAGGAN-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTTG-TAGA-GTGCACAAGAGGTGAC--TA-TGTGCCT-TAGCGTTTAGTT-CC-TG-AATCGATNATTTCNNAACGCGATAGAAC-TGTC-AGCGT-GGGACGTCCGAGAAGGGTAANNAATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTT-GCAAACGTAATATTTAAGGTTCTGAATTTCGCCCGAGNGAGCTTTGCAGACTGCCACATNT-A-A-TTGGTTT-AGAGAT--GCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGG-TTGGTTCGGT-G-T--TTG-CGT--AN-----GANTT--GGTTTG--GT-TTT-GTACA-CGGA----AGAGCGAACTATAGTCTTTNAGGATGATTTCGG-AGGAAAT-GATCCGGCNGGNAGCCAGGTTATGNTAGATGNTACCGAGTACAGGTTGGTAAGATCTGCAGTGAGAGANANGACATCAGGAATGGAGCCCATTTTGAACTTCCGAGANAGCTGANACAGATANTAGANAACTAAGGAAAACTTTAGTGNAGATGGCAAAAATCTTTTAAGGAAGGTGCATGTAGCTGNTGTACANTGCGGCAAAGTCCTGCCAAGGAANAGAATGTNTCCNTAGTGTCCGATTTCAGCTGCAANNACTGGTAGGGNATTCAAGAATTTGGTTCTACGTCAGATATATNTGATCTGGTGACTGCTTGGTGAGNTTGAAAATTNNTTNATANTTCCGCGTT-NAAGTGTGTT--AAGACG-TCTTATA-TCTTCTTTATTAGC--TAATTCCAAAGTTCACAGNCGTAACGAACGGACGA-CAC-AACAACTG-TTC-TGCA--CAGATGAGNCATT-GTCATGGCGTTTAACTC-GG-ATATGTCCATG-TCGGAT-----GCGT--AAA-CGATTTCCANCCCTTTTGAA-CAGGCGTTAGAG-ATTCG-AGAGCTTGGA-TTGGTATTTGCTGTGAATNAGAATCCGAAGGTGGTCGTAAACTTGTCCATAATCCTGTAATTTGGGNATTCCCCCAAAGTTATGCGTCT-TA-TTGCNGGACTGTCTTTNNCCTTTNGCGTGGGACGATAAAGACACNGGATTTAGAATAGCGTTCNATATCGGAGCACGCCACTTGCAAGCGTATCTGGTAAGCCAAGCGCATGCTCATCATCGNTTGNAGGGCGGAAGTGGGATANGGGCTGATGCAAGCCAATGNCATCTGCTAGAGCTGGAGGATGGTAAAAAATTNTTGTCGANCACCACAGGGNGTAGTTAGAATNNNTAGGANTATGNAGTCNGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTNCGACAAAAC-NCCACCTTGCCGNACGCCTTGTNGG-ACNGGAAACC-AN-NTG-ACTT-GG-TTTGATTGACAACTAC-TNCACTGGTTC-GGTA-TC-GTAG-TGACAG-TCGTCAATGATATT-CCAAATT-TTGCC-TC------TAATACC-NAATC-GTGCGACTTCATAAAAAGACCATTTAGCCCCTCGCATNNCCANACNGTAGTCGANNGCTTTTACTCGAAATGTCTATAAAATGCTTANNTANACGTTGCTGCCTCATTTCTAATGT---TGA-ACAAGGTT
Reference ( gi|1 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGGCTTTGTATATCATATGGACCTAGTTT--TC-TA--TTTCTAATTCATTCATTCATTCTATC---TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATA---A---ACAAAGGGTA-A-CTATAA--ATTTACCATTATGGAGTG-AC-----A----AAATGC---AC-ATAGAACATGAATTAAAATAAATGATAG------ATTATA---T-CT-CTCAAA-AA--CAAGAA--GGTA-----GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATACCAGG------TACACTTA-TAGTG-GAAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AATT-G-----CATAGTCTGTTGTTAGA-GTGCACAAGAGGTGAC--TA-TGTGCCT-TAGCGTTTAGTTTTC-TGAAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTGGGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGTC-GAGTGAGTTT-GCAGACTGCCACATGTTGTA-TTGGTTT-AGAGAT--GCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATG-TTGGTTCGATG-----TTG-CGT--AG-----GAGT---GGTTTG--GAATAT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG-TGGGAAT-GATCCGGTACAAAGCCAGGT-ATG--AGATAAT-C--AG-ACAG-TTGGTAAG-TCTGCAG-GAGAGAGATGACATCCGGAATGA--------------TTTCG-GAAAGCTGATACAAA-AA-AGAGAAC------AAAC----GT-T-GATG-CAAAAATCTTTTTAGGAAGGTG-----AGCT-GTGTCCATT-CGGTAAAGTC-TGCCAAAGAATAGAA-GTTTTCTT-GTATC-GATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T--GTTC-AC---AA--ATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAATTTGTTTGATAATTCCATGCT-GAAGTGTATT--AAGACG-TCTTATA-TCTTCTTTAATGGTGTTTATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTG-TT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACAC-AG-ATATGTCCATG-TCAGAT--AGTGCGT--AAA-CGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--T-TGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGTGG-AC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAA-CAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAAG-GGA--AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCAC-GGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAG-TTGATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAACCTAG-GTG-ATTT-GG-TTTGGGTGACAATTAC-CGCACT--TTC-AGTA-TT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-T-TTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGT-ATCAAATGC-CTTAC-TG---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGG--AGATGATAAAATTA-TTCCCGGATTTT
gi|4 : tttttttttgggggggggTAG-TAAGT----TGTTTGC--AATTT------ACTTTGCATGTCACATTTA--TAATTTAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTT-ATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAA---T---ACAAAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGAC-----ATATCAAATAC---ACCATAGAACATGA--TAAAATAAATGATAG------ATTA-A---TACT-CTCAGATAA--CAAGAA--GGTA------TTGGGAA-------TA---AT------GTA--------ATA-----CTTT----------ATACACAAGGAAAAAATACACTTAATA-TG-AAAAAGGATACCAAACTAG-ACAG-GCTTT-ACATTTGAT--AATTTG-----CA-AGTCTTTAAGTAGAAGTGCACAAGAGGTGAC--TAATGTGCTTGTAGCGTTTAGTTATC-TGAAATTGATG--TTCGGACCGCGATAGAG-GTGTCAAGCGT-GGGACGTCC-AGAAGGGTAgcagactataagttgtatcacagacctatgttataatatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|15 : TTC-ATC---TTTTATT-TCCTCTATTATACAGAGATTAATGA-T--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA--TCTTA-CATAAT-GAGTG-ACATACAA----AAA------AC-ATAGCACATGA
gi|13 : TT-GTTATCC-TTATTATTCA-----TAATACA---ATACATGTA----------CAAAGGTAA-A-CTATAA--TTTTAC-ATTGTTG-GTG-AC-----AT---ACACACTATAC-ATAAATCATGAATTAAAA-ACGTGATTG------ATTATA---C-CT--TCACA-AA--CAACAA--G
gi|5 : TATA---T---ACATAGGATA-AACTATGA---TTTAACATTATCG-GTG-AC-----ATACAAAATAG---ACGACAAAACATGAATTAGA-TAAAGTATAGACCTATATTGTACAGT-GTACATAAA-AATACAAGAATGGGTAAAAGAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGTT---CGGATTGTGAC-------G------CATACTT--TAATGAGAAAAGGAG-CTAGACTAGGGCAGTCCCTTTACG--TGATTAAATT-GTCGCTCATA-TTTTTTG-TAGA-GTGCATAAGAATTGAC--TA-GGT-CCT-TAGAGTTTAATTCCC-TG-AATCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCGACGCCTGAAAAGGANAAagaaaaggagat
gi|17 : aGTG-GAAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AATT-G-----CATAGTCTGTTG-TAGA-GTG
gi|10 : AAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT-------TT-G-----TATGGCCTATTGT-AAA-GTGTACAAGAGGTGACGATA-TTTA-CG-TAGCGATTA-----CATG---TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGT-GGGACGTCCGAGCACGGTA
gi|2 : gaaaaaggaaatgtgatgctgacAATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTT-GCAAACGTAATATTTAAGATTCTGA-T-TCGTCCGAGTGAGTTTTGCAGACTGCCACATGT-ATAGTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCA-TGATTGTTCCGGT------TTGTCTT--AAACGGTGAGTT--GGTTTGTGGTATATTGTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGGTA-GAAGCCAGGTTATGTTAGATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACATCAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAA-AATAGAGAAC------AAAC----AT-AAGATGGTAAAAATCTTTT-AGGAAG-TGT----AGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTAT-GGTAGAGTATTCAAGAA-TTGGTTCTACGTCAA--ATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTTTTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATGGTTGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTG-TTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATGTCCATGATCAGATCAAGTGCGTAGAAA-CGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATC-TGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA--ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAG-GGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCAC-GGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAA-CGAC-GGG-ATTTGGG-TTTGTTGGACAATTACGCGCACT--TTCAAGTA-TG-ATGAGTGACAATTCGTTAATGATATT-CCCAATT-TTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|9 : agAAGGTTCTGAATTTTACT-GAGGGAGCTT-GCAGAATGCCAC-TTTCAGG-TTGGTTT-AGAGGT--G-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGA-TCGGTTCGGTTAATTCTTG-CGT---T-----GATT---AGTTTG--ATTTTT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA-AGGAAAT-GATTCG
gi|16 : CTGCCACATACAG-A-TTGGTTT--GAGAT--GCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGA-TTG
gi|3 : AAG-ATGACATTGAAG--------ATCCGG-ATCAAGG-TTGGTTCG-TGGTT--TTA-CGTTGAG-----AAATTAGGGCTT------TTT-GTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG-AGGAAAT-GATCTAGCTGATAGCCAGGT-ATGA-AGATGCTAC--A--ATAG-TTGGTAAG-TCTACAG-GAGAAACAAGACA---------G--------------TTCTA-GAAAGCTGAT-TAGATAT-AGACAACTAAGGAAAACTTTAGTGT-GATG-CAAAAATCTTTTAAAGAAGGTACATGTAGTTGGTATATATT-GAACAAAGTC-TGCCAAGGAAAAGAA-GTGTCCAT-GTGTC-AATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT--GTTC-AC---AGATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAA---AGTTAACAGTTCCGCGTA-CAAGTGTGTT--AAGACG-TCTT-TAGTCTTCCTTATTA----TAATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTG-TTC-TGCA--CAGACGA
gi|6 : gTGATTCTATGTT-TAAGTGTGTT--AAGACG-TCTTAAA-TCTTCTTTATTAGCG-TAATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT--TATATCTAGATGAGTCATT-GTCATGGCGTTTAaacgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|3 : taacCACAGACGAAACGAACGGACGA-CAC-AACAACTG-TTC-TACA--CAGATGAGGCATT-GCCATGG-TTTT-ACTC-GG-G-AT-TAC----TCGG------------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAAC--ctcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgCATT-GTCATGGCGTTTA-CTC-GGGATATATCCATG-CCGGAT-----GCAT--AAAACGTTTCCCACTCCTTT-GAA-CAGGCGTTAGAG-ATTCC-AG
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacA-TTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATA--TCTGTAATTTG--CATTTTCCCAAAGTTAT--attactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|8 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgTGCTGA-TTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGAGC--GCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA--ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCACAAAGT--AGTTAG--TGTTTAGGATT-TGAAGTTTG-TCT-AACA
gi|14 : ATAGAAAAG-ACGACAAA-C-TCCACCCTG-------CCTTGTAAA-ACCGGAAACC-AA-TTG-GCCT-GGGTTTGATTTACAAC-AA-TGCACTAGTT---GTA-TTTGTA--TGACAG-TCGTCAATAAT
gi|12 : TGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACACC-AGTATG-ATTT-AG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TC-ATAG-TGACAG-TCGCCAATGACCCT-CCAAATT-TTGCC-TCTACCGGTAATACCTAAATT-GTGCAAtgaccagagattc
gi|7 : AAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAACCCA--TTGAACTG-GG-TTTGATTGACAACAAT-TTCACTGGTT---GCATTT-GTA--TGACAA-TCGTCAATAA-ATGACCAGA-GATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCA-T--GTCTC---CATGGCCAAACTGT-GTCGAAAGC-TTT---CGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCC-
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 1 1 333333 22 11 22222 22 33 1 33 11111 222222 111 2 111 1 333333333333 1 2222 11 333333 22222 3333333333333333333333 333 4444444444 11 111 1 11 22222 1 111111 222222 2222 11 1 1 1 11 2 1 2 2 1 2 1 2 2 1 1 2 11 333 1 2 1 222 11 11 2 11 1 2 1 3333333333 1 11 7777777777777777777777777777777777777777777777 222222 111 11111 11 22 55555555555 2 2 00000000000000000000000000000 333 8888888888888888888 11 1 33333 22 11 11 11 2 2 11 3333333 3333 5555555555 22 2 1111 1 11 1 1 333333333 11 11 1 2 1111 1 5555555555555 1 1 11 11 2 1 2 555 1 11 2222 11 22 11 2222 11 666666666 22 222 2 11 1 4444 333333 33 2 1 333 1 222 1 11111 1 3333333 111111111 1 1 222222 11 11 77777777 4444 11 111 33333 2 1 333 2
lowQualScore : 55 5 22 2 88 1 888 444444 66 77 88 22222 77 2 0 00 0 55 55 2 88888 6 1 333333 8 8 222 0 5 888 8 0 8 8 88 3 8 8 3 66 0 3 333333333333 1 0 1111 33 777777 1 55555 9999999999999999999999 4 888 4 0 0000000000 2 66 8 222 99 5 5 11 8 00000 0 1 8 8 8 0 333333 888888 0000 44 22 3 00 0 0 0 6 22 3 77 0 5 0 0 3 5 0 5 0 2 0 5 5 3 0 88 111 5 2 0 55 5 111 88 88 0 88 5 0 7 0 3 1 2 7 4444444444 0 3 33 2 8 3 3 8 6666666666666666666666666666666666666666666666 222222 2 1 555 88888 44 99 11 44444444444 3 3 1 1 33333333333333333333333333333 1 88 0 444 1 3333333333333333333 33 6 11111 00 1 33 33 11 1 3 1 0 1 3 0 33 7 6666666 0 1 6666 9999999999 1 6 3 44 3 1 3333 1 1 44 0 1 33 0 3 0 4 666666666 3 1 5 8 8 44 11 44 8 5 5 1 999 8 0 7777 0 0 6666666666666 3 44 7 0 4 0 00 88 0 5 3 1 3 0 0 0 7 111 2 1 6 0 77 2222 1 44 22 1 6 6 7 6 1 22 44 44 6 4444 0 0 0 33 111111111 0 0 1 1 0 22 000 3 33 1 7 6 0 4444 1 1 111111 00 333 1 3 1 11 7 5 000 3 5 000 0 0 99 3 1 8 1 33333 8 6 6 8 1 4444444 999999999 8 3 0 9 0 888888 11 22 2 22222222 7 7 3 0000 22 1 1 99 0 22 000 66666 6 7 7 3 999 1 7 0 7 5 555 0 4
lowQualScore : .. . .. . .. . ... ...... .. .. .. ..... .. . . .. . .. .. . ..... . . ...... . . ... . . ... . . . . .. . . . . .. . . ............ . . .... .. ...... . ..... ...................... . ... . . .......... . .. . ... .. . . .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . .. . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . . . .......... . . .. . . . . . .............................................. ...... . . ... ..... .. .. .. ........... . . . . ............................. . .. . ... . ................... .. . ..... .. . .. .. .. . . . . . . . .. . ....... . . .... .......... . . . .. . . .... . . .. . . .. . . . . ......... . . . . . .. .. .. . . . . ... . . .... . . ............. . .. . . . . .. .. . . . . . . . . . ... . . . . .. .... . .. .. . . . . . . .. .. .. . .... . . . .. ......... . . . . . .. ... . .. . . . . .... . . ...... .. ... . . . .. . . ... . . ... . . .. . . . . ..... . . . . . ....... ......... . . . . . ...... .. .. . ........ . . . .... .. . . .. . .. ... ..... . . . . ... . . . . . ... . .
lowQualScore : 55 5 00 3 00 0 777 333333 00 55 55 00000 55 5 7 33 0 88 55 5 88888 0 0 000000 0 0 222 8 0 888 0 8 0 0 88 2 0 0 2 55 0 2 555555555555 0 0 2222 88 000000 0 55555 5555555555555555555555 0 000 0 7 4444444444 5 22 2 444 00 4 6 00 0 00000 8 0 0 0 0 0 888888 555555 2222 22 00 0 22 0 0 0 5 00 0 55 0 0 0 0 0 5 0 5 0 5 0 5 0 0 0 55 000 5 5 0 55 5 000 55 55 0 55 5 7 3 7 3 0 0 3 0000000000 0 2 88 5 0 2 2 0 0000000000000000000000000000000000000000000000 222222 5 0 000 33333 77 33 77 33333333333 7 7 0 0 77777777777777777777777777777 0 33 7 000 0 7777777777777777777 33 0 33333 77 0 33 33 00 0 7 0 7 0 7 7 33 3 3333333 7 0 7777 3333333333 0 7 7 00 7 0 0000 0 0 00 0 0 88 0 2 0 0 555555555 0 0 0 0 0 44 00 77 0 0 6 4 222 0 8 2222 8 0 2222222222222 2 00 0 0 0 0 22 55 0 5 7 0 7 7 7 7 3 000 0 0 7 7 55 0000 0 00 00 0 7 7 3 7 0 77 77 77 7 3333 7 7 7 33 333333333 7 7 0 0 7 00 333 7 33 0 3 0 7 7777 0 0 777777 77 000 0 7 0 77 3 0 000 0 5 333 5 8 00 8 0 0 0 88888 0 0 0 0 0 6666666 222222222 0 8 0 2 0 888888 00 00 0 33333333 3 3 7 7777 00 0 0 33 7 00 777 77777 7 3 3 7 333 0 3 7 3 5 000 0 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----GCTTTGCATGTCACATNNACCTAGTTTAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTA-CATTAT-GAGT-GACATA-CA-AA-TANA-C-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACACAAGGAAAAAGTACACTTAATAGTG-G-AAAAGGA-NCCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGTC-GAGTGAGCTTTGCAGACTGCCACA--TACAG-G-TTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GT--TTG-CGT--A-----NGAGTTGGTT--TGGN-T-T-TTGTAC----A-CGGAAGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGGTTATG--AGATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATC-GGAATG------ATTTTG--------AGAAAGCTGATACAAA-A-TAGAGAAC------AAACGTT------GATGGCAAAAATCTTTT-AGGAAGGTG--TGTAGCTG-TGTACATTGCGGCAAAGTCCTGCCAAGGAATAGAA-GTTTTCTT-GTATCCGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT--GTTC-AC---AGA-ATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAATT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTC-G-G-ATATG---TCCATG-TCGGAT-G--TGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCG-AGATGATCGTAAACTTGTCCATA---CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGAA-AGCGTTNAATATCGGAGCA-GCCATTTGCAAGCGTATTTGGTAAGC--AAC----GTTCATCATCGATTGTAGAGCGGAAG-GGGATAAGGGC-GATGCAAGCCAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCAC-GGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAACC-AGT-TGA-TTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGT-AG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCCCTC-C-TCTCCACACAGTAGTCGAATGCTTTTACTCG--GTGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTTTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGGTAGATGANNAAATTGTTTNCCGGATTTT-----ACTTTGCATGTCACATTTA--TAATTTAATCATGGCTTTC--ATTCATTCATTTCTTCCATCCTTTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTACCATTATCGAGT-GACATA-CA-AA-TACA-C-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGCT-TTCGGATTGTGACACACAAGGAAAAAACACACTTAATAGTG-G-AAAAGGA-NCCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATNATTTCNNAACGCGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAANNAATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTT-GCAAACGTAATATTTAAGGTTCTGAATTTCGCCCGAGNGAGCTTTGCAGACTGCCACA--TNTA--A-TTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGGTTGGTTCG--GT--GT--TTG-CGT--A-----NGANTTGGTT--TGG--T-T-TTGTAC----A-CGGAAGAGCGAACTATAGTCTTTNAGGATGATTTCGG--AGGAAATGATCCGGCNGGNAGCCAGGTTATGNTAGATGNTACCGAGTACAGGTTGGTAAGATCTGCAGTGAGAGANANGACATCAGGAATGGAGCCCATTTTGAACTTCCGAGANAGCTGANACAGATANTAGANAACTAAGGAAAACTTTAGTGNAGATGGCAAAAATCTTTTAAGGAAGGTGCATGTAGCTGNTGTACANTGCGGCAAAGTCCTGCCAAGGAANAGAATGTNTCCNTAGTGTCCGATTTCAGCTGCAANNACTGGTAGGGNATTCAAGAATTTGGTTCTACGTCAGATATATNTGATCTGGTGACTGCTTGGTGAGNTTGAAAATTNNTTNATANTTCCGCG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTATTA--GC-TA--ATTCCAAAGTTCACAGNCGTAACGAACGGACGA-CAC-AACAACTGTTC-TGCA--CAGATGAGNCATT-GTCATGGCGTTTAACTC-G-G-ATATG---TCCATG-TCGGA-----TGCGT--AAACGATTTCCANCCCTTTTGAA-CAGGCGTTAGAG-ATTCG-AGAGCTTGGA-TTGGTATTTGCTGTGAATNAGAATCCGAAGGTGGTCGTAAACTTGTCCATAATCCTGTAATTTGGGNATTCCCCCAAAGTTATGCGTCT-TA-TTGCNGGACTGTCTTTNNCCTTTNGCGTGGGACGATAAAGACACNGGATTTAGAATAGCGTTCNATATCGGAGCACGCCACTTGCAAGCGTATCTGGTAAGCCAAGCGCATGCTCATCATCGNTTGNAGGGCGGAAGTGGGATANGGGCTGATGCAAGCCAATGNCATCTGCTAGAGCTGGAGGATGGTAAAAAATTNTTGTCGANCACCACAGGGNGTAGTTAGAATNNNTAGGANTATGNAGTCNGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTNCGACAAAAC-NCCACCTTGCCGNACGCCTTGTNGG-ACNGGAAACC-ANN-TGA-CTT-GGTTTGATTGACAACTAC-TNCACTGGTTC-GGTA-TCGT-AG-TGACAG-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATC-GTGCGACTTCATAAAAAGACCATTTAGCCCCTCGCATNNCCANACNGTAGTCGANNGCTTTTACTCGAAATGTCTATAAAATGCTTANNTANACGTTGCTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGGCTTTGTATATCATATGGACCTAGTTT--TC-TA--TTTCTAATTCATTCATTCATTCTATC---TTTATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGT-GACA----A-AA-TGCA-C-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CAAA-AA----CAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATACCAGG------TACACTTA-TAGTG-G-AAAAGGA-TCCAGATTAGGACAG-CCTTTTACATTTGAT--AA-TTG-----CATAGTCTGT-TGTTAG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGTC-GAGTGAG-TTTGCAGACTGCCACA--TGTTGTA-TTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--G---TTG-CGT--A-----GGAG-TGGTT--TGGA-A-T-ATGTAC----A-CGGAAGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--AGATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCCGGAATG------ATTTCG---------GAAAGCTGATACAAAAA--AGAGAAC------AAACGTT------GAT-GCAAAAATCTTTTTAGGAAGGTG-----AGCTG-TGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAAT---GTTC-AC-----AAATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAATTTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACAC-A-G-ATATG---TCCATG-TCAGATAG--TGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCG-AGATGATCATACACTTGTCCATA---TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATC-GAACAAGCCATTTGCAAGCATATTT-GTAAGC--AAC----GTTCATCATTGATTGTAGAGCGGAA--GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCAC-GGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAACCTAGG-TGA-TTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTA-TTAT-AGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTCT----TCTCCACACAGTA-TCAAATGC-CTTACT----GTGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : gGAAAAAGGAAATGTGATGCTG-ACAAAAGGA-GCCAGACTGGGGCAGTCCTTTTGTGCGT--------TTG-----TATGGCCTAT-TGT-AA-AGTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTA-TTCCCGGATTTT-----GC
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACACC-AGTATGA-TTT-AGTCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCAT-AG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAagactataagttgtatcacagacctatgttataatatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTA-CATTGTTG-GT-GACATA-CACAC-TATA-C-ATAAATCATGAATTAAAA-ACGTGATTGAT-TATAC-C------T-T-CACA-AA----CAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAG-ACGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAACC-AAT-TGG-CCTGGGTTTGATTTACAAC-AA-TGCACTAGTT---GTATTTGT-A--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTA-CATAAT-GAGT-GACATA-CA-AA--AAA-C-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACA--TACAG-A-TTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTG-G-AAAAGGA-TCCAGACTAGGGCAG-CCTTTTAGATTTGAT--AA-TTG-----CATAGTCTGT-TGT-AG-AGTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTT-GCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA--G-TTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GT--TTGTCTT--AAACGGTGAGTTGGTTTGTGG--TATATTGTTC----AGCGGAA-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTAGATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACATCAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAA-AATAGAGAAC------AAACAT-----AAGATGGTAAAAATCTTTT-AGGAAG-----TGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAA-TTGGTTCTACGTCAA--ATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTTTTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACAC-GAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCG-AGATGATCATAAACTTG-CCATAAT-CTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA--ACGCCATTTGCAAGCATATCTGGTAAGCCAAGC----GTTCATCATTGATTGTAGGGCGGAAG-GGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCAC-GGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACG-ACG-GGA-TTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTA-TGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---T--TTA-CGTTGA-----GAAATTAG-----GGCTT-T-TTGTAT----A-CAGACGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGGT-ATGA-AGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA---------------GTTCT---------AGAAAGCTGAT-TAGATA-TAGACAACTAAGGAAAACTTTAGTGT-GATG-CAAAAATCTTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGTC-TGCCAAGGAAAAGAA-GTGTCCAT-GTGTC-AATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT--GTTC-AC---AGATATATATGATCTGGTGACT-CTTGG--AGGTTGAAAA---GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATG--GTTTTACTC-G-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----ACTTTGCATGTCACATTTA--TAATTTAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTA-CATTAT-GAGTGGACATATCA-AA-TACACC-ATAGAACATGA--TAAAATAAATGATAGAT-TA-ATAC------TCT-CAGATAA----CAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TG-A-AAAAGGATACCAAACTA-GACAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TT-AACATTATCG-GT-GACATA-CA-AAATAGA-CGACAAAACATGAATTAGA-TAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAG---TTCGGATTGTGACGCATA-------------CTT--TAATGAG-AAAAGGA-GCTAGACTAGGGCAGTCCCTTTACGT--GATTAAA-TTGTCGCTCATA-TTTTT-TGT-AG-AGTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTC-G-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCGG-G-ATATA---TCCATG-CCGGA-----TGCATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATA--TCTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAACC-CAT-TGAACTG-GGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGT-A--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCATGT-----CTC-CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCT
gi|8 : TGCTG-ATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGAA--GCATTCTAT-TCGGAGC--GCCACTTGCAAGTGTATTTG-TAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGAAT--GAGC-GATGCAAGC-AATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCACA--AAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTgaatgccattttctgtgaatg
gi|9 : AAGGTTCTGAATTTTACT-GAGGGAGCTT-GCAGAATGCCACT--TTCA--GGTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTT--TGAT-T-T-TTGTACACGGA-CGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
Alignments
lowQualScore : 1 1 77777777777777777 1 111 1 1 22222 11 11 1 33 11111 222222 111 1 1 333333333333 1 2222 11 333333 22222 3333333333333333333333 222 33333333333 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 2 2222 33333333333 1 1 9999999999999999999999999 111 111 1 333333 1 33333 1 1 222 1 11 11 11 1 1 11 111111 1 1 33333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 222 11 222 2 3333333 22 1 2 2 2222 11 1 1 222 1 11 11111111 4444444 11 11 1 1 222222 11 1 44444444 2222 222 11 111 4444 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 0 444 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 8 8 88 1 6 3 66 0 3 333333333333 1 0 1111 33 777777 1 55555 9999999999999999999999 1 000 1 55555555555 3 3 99 8 99 5 5 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 444444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 8888888888888888888888888 555 666 3 888888 3 3 55555 3 3 6 555 3 33 33 11 3 3 33 7 888888 7 3 3 44444 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 888 1 44 0 555 0 3 7777777 0 22 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 22 88 8 3 0 9 0 888888 11 0 2 88888888 7 7777 777 99 0 000 5555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . . . .. . . . .. . . ............ . . .... .. ...... . ..... ...................... . ... . ........... . . .. . .. . . .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . ...... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... ... ... . ...... . . ..... . . . ... . .. .. .. . . .. . ...... . . . ..... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . ... . .. . ... . . ....... . .. . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . .. .. . . . . . ...... .. . . ........ . .... ... .. . ... .... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 7 000 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 0 0 88 0 0 2 55 0 2 555555555555 0 0 2222 88 000000 0 55555 5555555555555555555555 0 555 0 00000000000 2 2 00 0 00 4 6 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 555555 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 7 7777 77777777777 3 3 7777777777777777777777777 000 000 3 333333 7 3 00000 3 3 7 777 3 33 33 00 3 3 33 3 777777 3 3 3 77777 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 000 0 77 7 777 7 3 7777777 7 77 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 88 00 0 8 0 2 0 888888 00 0 0 33333333 3 3333 333 33 7 777 3333 7 3 3 3 3 3 3 3 3 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACAT-GACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC-AGGAAAAAGTACACTTAATGGTGG-AAAAGGA-NCCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGGT-ATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTTAG-GAAGGTG--TGTAGCTG-TGTACATTGCGGCAAAGTCCTGCCAAGGAATAGAA-GTTTTCTT-GTATCCGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-ACG--GA-ATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAG-A-AGCGTTNAATATCGAANC-GCCATTTGCAAGCGTATTT-GTAAGC--A----ACGTTCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAG--CCTC-T-TCTCCACACAGTAGTCGAATGCTTTTACTC---GTGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATGTCACATNNACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACACAAGGAAAAAGTACACTTAATAGTGG-AAAAGGA-NCCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATACA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGGTTATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTTGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTTAG-GAAGGTG--TGTAGCTG-TGTACATTGCGGCAAAGTCCTGCCAAGGAATAGAA-GTTTTCTT-GTATCCGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-ACA--GA-ATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGAA-AGCGTTNAATATCGGAGCAGCCATTTGCAAGCGTATTTGGTAAGC--A----ACGTTCATCATCGATTGTAGAGCGGAAGGGGATAAGGGC-GATGCAAGCCAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCCCTC-C-TCTCCACACAGTAGTCGAATGCTTTTACTCG--GTGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTTTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA----A-AA-TGCAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CAAA-AA----CAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATACCAGG------TACACTTA-TAGTGG-AAAAGGA-TCCAGATTAGGACAG-CCTTTTACATTTGAT--AA-TTG-----CATAGTCTGT-TGTTAG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGGT-ATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTTAG-GAAGGTG-----AGCTG-TGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-ACA---A-ATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAG-A-AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--A----ACGTTCATCATTGATTGTAGAGCGGAAGGGA--AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAG--CCTC-T-TCTCCACACAGTA-TCAAATGC-CTTACT----GTGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : gGAAAAAGGAAATGTGATGCTGACAAAAGGA-GCCAGACTGGGGCAGTCCTTTTGTGCGT--------TTG-----TATGGCCTAT-TGT-AA-AGTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTATT-CCCGGATTTT-----GCAGACTATAAGTTG--TATCACA--GACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-CACAC-TATAC-ATAAATCATGAATTAAAA-ACGTGATTGAT-TATAC-C------T-T-CACA-AA----CAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATTTGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-CA-AA--AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGA-TCCAGACTAGGGCAG-CCTTTTAGATTTGAT--AA-TTG-----CATAGTCTGT-TGT-AG-AGTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTTAG-GAA---G--TGTAGCTT-TGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTACGTCAA-ATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAAAC-GCCATTTGCAAGCATATCTGGTAAGCCAA----GCGTTCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTT---GTGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGGT-ATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----------G--------------TTCT-AGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGTC-TGCCAAGGAAAAGAA-GTGTCCAT-GTGTC-AATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACA--GATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATCA-AA-TACACCATAGAACATGA--TAAAATAAATGATAGAT-TA-ATAC------TCT-CAGATAA----CAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TGA-AAAAGGATACCAAACTA-GACAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CA-AAATAGACGACAAAACATGAATTAGA-TAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGTT---CGGATTGTGACGCA-----------TAC-TTTAATGA--G-AAAAGGA-GCTAGACTAGGGCAGTCCCTTTACGT--GATTAAA-TTGTCGCTCATA-TTTTT-TGT-AG-AGTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCATGT-----CTC-CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAG-A-AGCATTCTAT-TCGGAGC-GCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 1 1 77777777777777777 1 333 1 1 22222 11 11 1 33 11111 222222 111 1 1 333333333333 1 2222 11 333333 22222 3333333333333333333333 222 44444444444 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 1 2222 33333333333 1 1 0000000000000000000000000 111 1 333333 1 33333 1 1 2222222 1 11 2 11 1 1 2 111111 1 1 333333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 11 11 11 1 11 2222 1 1 1 2 2222 11 1 1 222 1 11 11111111 4444444 11 11 1 1 222222 11 1 44444444 11 33333 11 111 22222 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 222 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 8 8 88 1 6 3 66 0 3 333333333333 1 0 1111 33 777777 1 55555 9999999999999999999999 1 000 1 88888888888 3 3 99 8 99 3 5 5 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 0 444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 1111111111111111111111111 7 666 3 888888 3 3 55555 3 3 5555555 3 33 3 11 3 3 3 7 888888 7 3 3 555555 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 88 1 44 44 0 3 88 8888 0 6 3 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 22 88 8 3 0 9 0 888888 11 0 2 88888888 44 22222 99 0 000 55555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . . . .. . . . .. . . ............ . . .... .. ...... . ..... ...................... . ... . ........... . . .. . .. . . . .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . ... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... . ... . ...... . . ..... . . ....... . .. . .. . . . . ...... . . . ...... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . .. . .. .. . . .. .... . . . . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . .. .. . . . . . ...... .. . . ........ .. ..... .. . ... ..... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 333 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 0 0 88 0 0 2 55 0 2 555555555555 0 0 2222 88 000000 0 55555 5555555555555555555555 0 555 0 44444444444 2 2 00 0 00 2 4 6 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 2 000 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 3 7777 77777777777 3 3 7777777777777777777777777 3 000 3 333333 7 3 00000 3 3 0000000 3 33 3 00 3 3 3 3 777777 3 3 3 333333 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 33 0 77 33 7 3 33 3333 7 7 3 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 88 00 0 8 0 2 0 888888 00 0 0 33333333 77 77777 33 7 777 33333 7 3 3 3 3 3 3 3 0 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC--GGAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-ACG--AA-ATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACACA-GGAAAAAGTACACTTAATGGTGG-AAAAGGAN-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGTCCTGCCAAGGAATAGAA-GTTTTCTT-GTATCCGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-ACG--GA-ATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-NCGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA----A-AA-TGCAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CAAA-AA----CAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATACC-AG-----GTACACTTA-TAGTGG-AAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AATT-G-----CATAGTCTGTT-GTTAGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTT-AGGAAGGT--G---AGCT-GTGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-AC---AA-ATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAA-GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGTA-TCAAATGC-CTTACT-G---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : gGAAAAAGGAAATGTGATGCTGACAAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT-------TT-G-----TATGGCCTATT-GT-AAA-GTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTA-TTCCCGGATTTT-----GCAGACTATAAGTTG--TATCACA-G-ACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-CACAC-TATAC-ATAAATCATGAATTAAAA-ACGTGATTGAT-TATAC-C------T-T-CACA-AA----CAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATTTGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-CA-AA--AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AATT-G-----CATAGTCTGTT-GT-AGA-GTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTT-AGGAA-----GTGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTACGTCAA-ATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA-ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGG-TATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----G---------------------TTCTAGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGT-CTGCCAAGGAAAAGAA-GTGTCCAT-GTGT-CAATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACA--GATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATCA-AA-TACACCATAGAACATGA--TAAAATAAATGATAGAT-TA-ATAC------TCT-CAGATAA----CAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TGA-AAAAGGATACCAAACTAGA-CAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CA-AAATAGACGACAAAACATGAATTAGA-TAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGTT---CGGATTGTGACGCA-----------TAC-TTTAATGA--G-AAAAGGAG-CTAGACTAGGGCAGTCCCTTTACGT--GATTAAATT-GTCGCTCATA-TTTTTT-GT-AGA-GTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCAT---GTCTC---CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGA-GCGCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 1 1 77777777777777777 1 333 1 1 22222 11 11 1 33 11111 222222 111 1 1 333333333333 1 2222 11 333333 22222 3333333333333333333333 222 44444444 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 1 2222 33333333333 1 1 0000000000000000000000000 111 1 333333 1 33333 1 1 2222222 1 11 1 11 1 1 1 111111 1 1 3333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 11 11 1 1 11 2222 1 1 1 2 2222 11 1 1 222 1 11 11111111 4444444 11 11 1 1 222222 11 1 44444444 11 33333 11 111 22222 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 222 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 8 8 88 1 6 3 66 0 3 333333333333 1 0 1111 33 777777 1 55555 9999999999999999999999 1 000 1 99999999 11 3 3 888 8 88 5 44 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 0 444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 1111111111111111111111111 7 666 3 888888 3 3 55555 3 3 5555555 3 33 3 11 3 3 3 7 888888 7 3 3 8888 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 88 1 44 3 0 3 88 8888 0 6 3 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 22 88 8 3 0 9 0 888888 11 0 2 88888888 44 22222 99 0 000 55555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . . . .. . . . .. . . ............ . . .... .. ...... . ..... ...................... . ... . ........ .. . . ... . .. . .. .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . ... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... . ... . ...... . . ..... . . ....... . .. . .. . . . . ...... . . . .... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . .. . .. . . . .. .... . . . . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . .. .. . . . . . ...... .. . . ........ .. ..... .. . ... ..... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 333 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 0 0 88 0 0 2 55 0 2 555555555555 0 0 2222 88 000000 0 55555 5555555555555555555555 0 555 0 44444444 00 2 2 777 0 66 4 44 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 2 000 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 3 7777 77777777777 3 3 7777777777777777777777777 3 000 3 333333 7 3 00000 3 3 0000000 3 33 3 00 3 3 3 3 777777 3 3 3 3333 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 33 0 77 3 7 3 33 3333 7 7 3 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 88 00 0 8 0 2 0 888888 00 0 0 33333333 77 77777 33 7 777 33333 7 3 3 3 3 3 3 3 0 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-CA-AA-TANAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CANA-AA----CAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC--GGAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AA-TTG-----CATAGTCTNT-TGT-AG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA----A-AA-TGCAC-ATAGAACATGAATTAAAATAAATGATAGAT-TATAT-C------TCT-CAAA-AA----CAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATAC--C----AGGTACACTTA-TAGTGG-AAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AA-TTG-----CATAGTCTGT-TGTTAG-AGTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTT-AGGAAGGT--G---AGCT-GTGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-AC----AAATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAA-GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGTA-TCAAATGC-CTTACT-G---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : gGAAAAAGGAAATGTGATGCTGACAAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT--------TTG-----TATGGCCTAT-TGT-AA-AGTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTA-TTCCCGGATTTT-----GCAGACTATAAGTTG--TATCACA-G-ACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-CACAC-TATAC-ATAAATCATGAATTAAAA-ACGTGATTGAT-TATAC-C------T-T-CACA-AA----CAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATTTGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-CA-AA--AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AA-TTG-----CATAGTCTGT-TGT-AG-AGTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTT-AGGAA-----GTGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTAC-GTCAAATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA-ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGG-TATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----G---------------------TTCTAGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGT-CTGCCAAGGAAAAGAA-GTGTCCAT-GTGT-CAATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACAG--ATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATCA-AA-TACACCATAGAACATGA--TAAAATAAATGATAGAT-TA-ATAC------TCT-CAGATAA----CAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAAT-ATGA-AAAAGGATACCAAACTA-GACAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CA-AAATAGACGACAAAACATGAATTAGA-TAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGAGTT---CGGATTGTGACGCA-----------TAC-TTTAATGA--G-AAAAGGAG-CTAGACTAGGGCAGTCCCTTTACG--TGATTAAA-TTGTCGCTCATA-TTTTT-TGT-AG-AGTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCAT---GTCTC---CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGA-GCGCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 1 1 77777777777777777 1 333 1 1 22222 11 11 1 33 11111 222222 111 111 1 1 333333333333 222222 11 333333 22222 3333333333333333333333 222 33333333333 1 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 1 2222 33333333333 1 1 0000000000000000000000000 111 1 333333 1 33333 1 1 2222222 1 11 1 11 1 1 1 111111 1 1 3333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 11 11 1 1 11 2222 1 1 1 2 2222 11 1 1 222 1 11 11111111 4444444 11 11 1 1 222222 11 1 44444444 11 33333 11 111 22222 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 222 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 111 8 0 1 6 3 3 3 0 3 333333333333 1 222222 33 777777 1 55555 9999999999999999999999 1 000 1 99999999999 3 3 5 8 88 3 5 44 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 0 444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 1111111111111111111111111 7 666 3 888888 3 3 55555 3 3 5555555 3 33 3 11 3 3 3 7 888888 7 3 3 8888 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 88 1 44 3 0 3 88 8888 0 6 3 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 22 88 8 3 0 9 0 888888 11 0 2 88888888 44 22222 99 0 000 55555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . ... . . . . . . . . . ............ . ...... .. ...... . ..... ...................... . ... . ........... . . . . .. . . .. .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . ... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... . ... . ...... . . ..... . . ....... . .. . .. . . . . ...... . . . .... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . .. . .. . . . .. .... . . . . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . .. .. . . . . . ...... .. . . ........ .. ..... .. . ... ..... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 333 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 000 0 8 0 0 2 2 2 0 2 555555555555 0 222222 88 000000 0 55555 5555555555555555555555 0 555 0 99999999999 2 2 0 0 66 2 4 44 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 2 000 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 3 7777 77777777777 3 3 7777777777777777777777777 3 000 3 333333 7 3 00000 3 3 0000000 3 33 3 00 3 3 3 3 777777 3 3 3 3333 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 33 0 77 3 7 3 33 3333 7 7 3 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 88 00 0 8 0 2 0 888888 00 0 0 33333333 77 77777 33 7 777 33333 7 3 3 3 3 3 3 3 0 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA-----A-AATGCAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CAAA-A----ACAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATAC---CAG---GTACACTTA-TAGTGG-AAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AATT-G-----CATAGTCTGTT-GTTAGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTT-AGGAAGGT--G---AGCT-GTGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-AC----AAATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAA-GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGTA-TCAAATGC-CTTACT-G---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : g---GAAAAAGGAAATGTGATGCTGACAAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT-------TT-G-----TATGGCCTATT-GT-AAA-GTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTA-TTCCCGGATTTT-----GCAGACTATAAGTTG--TATCACA-G-ACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-C-ACACTATAC-ATAAATCATGAATTAAAA-ACGTGATTGA-TTATAC-C------T-T-CACA-A----ACAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATTTGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-C-A-AA-AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AATT-G-----CATAGTCTGTT-GT-AGA-GTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTT-AGGAA-----GTGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTAC-GTCAAATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA-ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGG-TATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----G---------------------TTCTAGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGT-CTGCCAAGGAAAAGAA-GTGTCCAT-GTGT-CAATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACAG--ATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATC-A-AATACACCATAGAACATGA--TAAAATAAATGATAGA-TTA-ATAC------TCT-CAGATA----ACAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TGA-AAAAGGATACCAAACTAGA-CAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CAA-AATAGACGACAAAACATGAATT-AGATAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGA---GTTCGGATTGTGACGCA-----------TAC-TTTAATG--AG-AAAAGGAG-CTAGACTAGGGCAGTCCCTTTACG--TGATTAAATT-GTCGCTCATA-TTTTTT-GT-AGA-GTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCAT---GTCTC---CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGA-GCGCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 1 1 77777777777777777 1 333 1 1 22222 11 11 1 33 11111 222222 111 111 1 1 333333333333 222222 11 333333 22222 3333333333333333333333 222 33333333333 1 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 1 2222 33333333333 1 1 0000000000000000000000000 111 1 333333 1 33333 1 1 2222222 1 11 1 11 1 1 1 111111 1 1 3333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 11 11 1 1 11 2222 1 1 1 2 2222 11 1 1 222 1 11 11111111 4444444 11 11 1 1 222222 11 1 44444444 11 33333 11 111 22222 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 222 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 111 8 0 1 6 3 3 3 0 3 333333333333 1 222222 33 777777 1 55555 9999999999999999999999 1 000 1 99999999999 3 3 5 8 88 3 5 44 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 0 444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 1111111111111111111111111 7 666 3 888888 3 3 55555 3 3 5555555 3 33 3 11 3 3 3 7 888888 7 3 3 8888 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 88 1 44 3 0 3 88 8888 0 6 3 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 22 88 8 3 0 9 0 888888 11 0 2 88888888 44 22222 99 0 000 55555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . ... . . . . . . . . . ............ . ...... .. ...... . ..... ...................... . ... . ........... . . . . .. . . .. .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . ... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... . ... . ...... . . ..... . . ....... . .. . .. . . . . ...... . . . .... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . .. . .. . . . .. .... . . . . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . .. .. . . . . . ...... .. . . ........ .. ..... .. . ... ..... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 333 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 000 0 8 0 0 2 2 2 0 2 555555555555 0 222222 88 000000 0 55555 5555555555555555555555 0 555 0 99999999999 2 2 0 0 66 2 4 44 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 2 000 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 3 7777 77777777777 3 3 7777777777777777777777777 3 000 3 333333 7 3 00000 3 3 0000000 3 33 3 00 3 3 3 3 777777 3 3 3 3333 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 33 0 77 3 7 3 33 3333 7 7 3 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 88 00 0 8 0 2 0 888888 00 0 0 33333333 77 77777 33 7 777 33333 7 3 3 3 3 3 3 3 0 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA-----A-AATGCAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CAAA-A----ACAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATAC---CAG---GTACACTTA-TAGTGG-AAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AATT-G-----CATAGTCTGTT-GTTAGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTT-AGGAAGGT--G---AGCT-GTGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-AC----AAATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAA-GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT-ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGTA-TCAAATGC-CTTACT-G---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : g---GAAAAAGGAAATGTGATGCTGACAAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT-------TT-G-----TATGGCCTATT-GT-AAA-GTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTA-TTCCCGGATTTT-----GCAGACTATAAGTTG--TATCACA-G-ACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-TCATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-C-ACACTATAC-ATAAATCATGAATTAAAA-ACGTGATTGA-TTATAC-C------T-T-CACA-A----ACAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATTTGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-C-A-AA-AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AATT-G-----CATAGTCTGTT-GT-AGA-GTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTT-AGGAA-----GTGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTAC-GTCAAATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA-ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG-TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGG-TATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----G---------------------TTCTAGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGT-CTGCCAAGGAAAAGAA-GTGTCCAT-GTGT-CAATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACAG--ATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATC-A-AATACACCATAGAACATGA--TAAAATAAATGATAGA-TTA-ATAC------TCT-CAGATA----ACAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TGA-AAAAGGATACCAAACTAGA-CAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CAA-AATAGACGACAAAACATGAATT-AGATAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGA---GTTCGGATTGTGACGCA-----------TAC-TTTAATG--AG-AAAAGGAG-CTAGACTAGGGCAGTCCCTTTACG--TGATTAAATT-GTCGCTCATA-TTTTTT-GT-AGA-GTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATTTGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCAT---GTCTC---CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGA-GCGCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca
blockSeqs : GG A A T CGG GCAGACTATAAG C TTT C T A A ATGGC . C CT T A TC TT G GATTA T T TTTACA T A GTA . . G TC C T C A A T C T TGTACAGTGTA C AAAAT TG AAAGGA A GTGGG TTTATTCTAGGGTACTTTGGAA T . T CAAGGAAAAAA A A C C TA G T CG TA T TCGCT A A . A A TTACG GTTAT AAA TA CT A C A T . G T CC . G . . A T . T . C . A C T . AA T T G . CA T TTC TA AA . AA T A C T T TA T A AT C C G T C GTTTGTCTTAAACGGT G T T TGGTATA T G CGGA G CTG CTG T TTA TCGAGTACAG A T TCAGGAATGAAGCCCATTTTGAAC A ACA T TAAGGA A A GTGAT . A GGTACAT G GC C AG T A C T AATGAC T G T GTC C T G G T TTT T C G TA G A G A GTTGTT C G T A TG TC TC G T . A A C GTTT A ATCAAGTGCGTAG A AT T G T T GA TT . T G A T AT A C GC . . A G G A G AT T A . G CA ATGC G T T C C T A AAAA G G AA A A T G G T T TT T AA G T C CAGTA A T G TTCAA CA G T C A T G TACCGG TA A A CATAAAAA TT TCGT AA TTT CGAAA C T A T T T T T C . A
blockSeqs : G . . ACT . G . . . A . T . TC TA G CA A T . . . T . . . CA . A G A A T . T ACTCT G TA . AAAGA T . A A G . G G G TT . . . G . . . . GCTTG ATTCC AA AA GG C G . . . G . . C . G . A . C . G C . TGGTTTTACGTTGAG A T T GCTT . . . G A TA . AA ACAATA . . G A T . . T . G . . GT . G . . . . . . GTA T . . AG . C . . . . A . C . . A . T GCGTA A C . . C . AA . C . T . G G . ATGCATA A CA C . A . A A . . T . . A G G . . . C T . . . . G . . . G . . . . G . . T T C C A A A . GACGG G T . TTCG TG G . T . T . . T . A . T CA G TT TG . . . . . . T T .
blockSeqs : T . T . . AT T T . . . T . . . C . C . . . . . . CTT T A . . A . A . . T G T TT . . . T . . . . CCT C . G TA A C . . . . G . . . . . A C . GTTAATTCTTGCGTT . T . ATTT . . . . A . T . . . . T TA A C . . C . GG . C . T . . A . . . CA . . A . C . T T T . CAAT G C . AGTT AT . . T . G . . C . G
blockSeqs : . . . . . T . . . C . G . . . G . . . . . . T . . . . . . . A . . T . GT . . . T . . . T . A . CCAT G . . GGTT TG . . .
blockSeqs : AT
blockSeqCons : C** C* CAGT**** CG **
originalCons : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
finalCons : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATAC--A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAACCAGT----TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATTCGTA--TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Alignments
lowQualScore : 1111111111111111111111111
lowQualScore : 1 1 77777777777777777 1 333 1 1 22222 11 11 1 33 11111 222222 111 111 1 1 333333333333 222222 11 333333 22222 3333333333333333333333 222 33333333333 1 1 11 22222 1 111111 222222 2222 11 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 1 222 11 11 1 11 1 1 1 111 1 11 66666666666666666666666666 1111111 1 1 2222 111 111 1 2222 33333333333 1 1 0000000000000000000000000 111 1 333333 1 33333 1 1 2222222 1 11 1 11 1 1 1 111111 1 1 3333 1 1 3333 1 11 1 1 333333333 11 11 1 1 1111 1 4444444444444 1 1 11 11 1 1 1 33 1 11 1 1 11 11 1 1 11 2222 1 1 1 2 2222 11 1 1 222 1 11 11111111 4444444 2222222 1 1 222222 11 1 44444444 11 33333 11 111 22222 1 1 1
lowQualScore : 22 5 2 7 888 11111111111111111 2 222 6 3 3 7 22222 88 1 88 3 0 55 55 2 88888 6 1 333333 8 8 222 8 8 8 0 111 8 0 1 6 3 3 3 0 3 333333333333 1 222222 33 777777 1 55555 9999999999999999999999 1 000 1 99999999999 3 3 5 8 88 3 5 44 11 8 00000 0 1 8 8 8 0 333333 888888 0000 33 11 1 00 0 0 0 6 1 77 5 5 5 5 1 5 5 5 5 1 5 5 5 1 5 88 111 5 1 5 22 5 111 88 88 5 88 5 7 3 2 7 0 444 0 3 33 2 8 3 3 8 00000000000000000000000000 6 3 3 3333333 0 0 1111 2 0 555 222 3 2222 00000000000 3 3 1111111111111111111111111 7 666 3 888888 3 3 55555 3 3 5555555 3 33 3 11 3 3 3 7 888888 7 3 3 8888 6 1 3 6 3 3333 1 0 0 1 33 0 3 0 1 333333333 1 1 8 8 44 11 22 8 3 8 1 8 6 0 7777 0 0 8888888888888 3 22 7 0 1 0 00 88 5 5 1 3 0 7 11 2 6 77 5 5 7 6 6 7 6 88 1 44 3 0 3 88 8888 0 6 3 3 3 1 7 6 8888 6 6 88 3 3 7 5 111 1 5 99 7 0 99 4 1 8 77777777 3 3 8 2222222 0 3333333 8 3 0 9 0 888888 11 0 2 88888888 44 22222 99 0 000 55555 6 7 7 3 7 7 7 7 2 5 1
lowQualScore : .. . . . ... ................. . ... . . . . ..... .. . .. . . .. .. . ..... . . ...... . . ... . . . . ... . . . . . . . . . ............ . ...... .. ...... . ..... ...................... . ... . ........... . . . . .. . . .. .. . ..... . . . . . . ...... ...... .... .. .. . .. . . . . . .. . . . . . . . . . . . . . . . .. ... . . . .. . ... .. .. . .. . . . . . . ... . . .. . . . . . .......................... . . . ....... . . .... . . ... ... . .... ........... . . ......................... . ... . ...... . . ..... . . ....... . .. . .. . . . . ...... . . . .... . . . . . .... . . . . .. . . . . ......... . . . . .. .. .. . . . . . . . .... . . ............. . .. . . . . .. .. . . . . . . .. . . .. . . . . . . . .. . .. . . . .. .... . . . . . . . . .... . . .. . . . . ... . . .. . . .. . . . ........ . . . ....... . ....... . . . . . ...... .. . . ........ .. ..... .. . ... ..... . . . . . . . . . . .
lowQualScore : 00 5 0 3 777 33333333333333333 0 333 7 3 3 3 00000 55 0 33 2 0 88 55 5 88888 0 0 000000 0 0 222 0 0 0 8 000 0 8 0 0 2 2 2 0 2 555555555555 0 222222 88 000000 0 55555 5555555555555555555555 0 555 0 99999999999 2 2 0 0 66 2 4 44 00 0 00000 8 0 0 0 0 0 888888 555555 2222 55 22 0 22 0 0 0 5 0 55 0 0 5 0 0 5 0 5 0 0 0 5 0 0 0 55 000 5 0 0 00 5 000 55 55 5 55 5 3 3 0 3 2 000 0 2 88 5 0 2 2 0 88888888888888888888888888 5 2 2 5555555 0 0 2222 5 2 000 777 3 7777 77777777777 3 3 7777777777777777777777777 3 000 3 333333 7 3 00000 3 3 0000000 3 33 3 00 3 3 3 3 777777 3 3 3 3333 7 0 3 7 3 0000 0 8 0 0 88 0 2 0 0 000000000 0 0 0 0 44 00 00 0 2 0 4 0 0 8 2222 8 0 5555555555555 2 00 0 0 0 0 22 55 5 5 0 3 7 3 77 0 7 55 5 5 3 7 7 3 7 33 0 77 3 7 3 33 3333 7 7 3 3 3 0 3 7 3333 7 7 33 3 7 3 0 000 0 5 33 0 8 44 0 4 0 88888888 2 8 0 4444444 8 2222222 0 8 0 2 0 888888 00 0 0 33333333 77 77777 33 7 777 33333 7 3 3 3 3 3 3 3 0 5 0
consensus : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATT-CGTAG-TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
Reference ( family-753 ) : GGGGGGGGGGGGGGGGGGGGGGGGGGNNAGATGAGAAAGTTATTTCCCGGATTTT-----G----CT-----TTGCATATCACATG-ACCTA-GTT-TAATCATGGCTTTCTAATTCATTCATTCNTTTCATC--TTTTATT-TCCTCTATTAT-CAGAGATTAATGNAT--ATACATGTATATACA------AAGGGTA-A-CTATAA-T-TTTAC-ATTATG-AGTG-ACATA-C-A-AATANAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CANA-A----ACAAGAA--GGTAAAA-GAGNTGGGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACANTGAGCTGTCCGGANTGTGATACAC---GAAAAAGTACACTTAATGGTGG-AAAAGGAT-CCAGACTAGGGCAGTCCTTTTACGTTTGAT--AATT-G-----CATAGTCTNTT-GT-AGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-C-CTG-AA-TCGATGATTTCNGANCGCGATAGAGC-TGTC-AGCGTG-GG-ACGTCCGAGAAGGGTAAGAAATAGNCCATATTCCCTGGCAGAGGCGCAAAGTTCAGNCTCCAGGTGTACGCTGAATAGTGTTGGATATNGAGTTCCACCAAGTAGTCTGCTGNTTTGTAAGAAACGGACAGGAAAATTGCTGCGTGGGAAAAAACGTCTGTGATATATANGACCGCACAGAGCACATACANNTGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAGTTTGCAAACGTAATATTTAAGATTCTGAATTTCGT-CGAGTGAGCTTTGCAGACTGCCACATGCA-G-GTTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAAGATTGGTTCG--GT--GTT--TG-CGT--A-----NGAGTTGGTTTG-GNT-T-TT-GTACA-CGGA----AGAGCGAACTATAGTCTTCCAGGATGATTTCGG--AGGAAATGATCCGGCTNAAAGCCAGG-TATG--A-GATAAT-C--AGTACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACAT-C-GGAATGA--------------TTTCGAGAAAGCTGATAC-AAA-ATAGAGAAC------AAACGT-TGATG----GCAAAAATC-TTTT-AGGAAGGT--GTGTAGCT-GTGTACATTGCGGCAAAGT-CTGCCAAGGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGACTGGTAGAGTATTCAAGAATT-GTTC-AC-G--AAATATCTGATCTGGTGANT-TTTGG-GAGTTTGAAAA-TT-TTTNATAATTCCATG-TTNAAGTGTGTT--AAGAC-GTCTTATA-TCTTCTTTANTG--GT-TA--ATTCCANAGTTCACAGCCGTAANGAACGGACGA-CAC-AACAACTGTTC-TGTA--TAGATGANNCATT-GTCATGGCGTTT-ACTCG-G-ATATG---TCCATG-TCGGAT---GTGCGTA-AAACGATTTCCNNCCCTTTTGAA-CAGGCGTTNGAG-ATTCG-AGAGCTTGGATTTGGTATTTGCTGTNAATCAGAATCCGA-GATGATCGTAAACTTGTCCATA--CTGTAATTTGGGAATTCCCCCAAAATTATGCGTCTATATTTGCAGGACTGTCTTTGACCTTTTGCGTGGGACGATAAAGACACAGGATTTAGA--AGCGTTNAATATCGAA-ACGCCATTTGCAAGCGTATTT-GTAAGC--AACGT----TCATCATCGATTGTAGAGCGGAAGGGGA-AAGGGC-GATGCAAG-CAATGNCATCTGCTAGAGCTGG-GAATGGT----AATTTTTGTCGAACACCACGGGAGTAGTTAG--TTGTTAGGAGT-TGCAGTTCGTTCTGAGCAGGCTGTTGATNGAGAACAAGATTATAGAAAAGTTCGATAAAAC-ACCACCTTGCCGAACGCCTTGTTGG-ACGGGAAAC--C-AGT-TGATTTGGGTTTGATTGACAATTAC-CGCACT-GTTC-GGTATT-CGTA--TGACAA-TCGTCAATGATATT-CCAAATTTTGCC-TC------TAATACC-NAATT-GTGCGACTT--------GACCATTTAGCCTC---T-TCTCCACACAGTAGTCGAATGCTTTTACTCG---TGTCTATAAAATGC-TATGTATACGTTACTGCCTCATTTCTAATGTCTGTGATACANGGTT
gi|1 : GGGGGGGGGGGGGGGGGGGGGGGGGGCTAG-TAAGAAA--TATTTCCCGAATTTTTTTTGG----CT-----TTGTATATCATATGGACCTA-GTT-T--TC-TA--TTTCTAATTCATTCATTCATTCTATC--TTT-ATT-TCC-CTATTA--CAGAGATTAATGAAT--ATACATGTATAAACA------AAGGGTA-A-CTATAA-A-TTTACCATTATGGAGTG-ACA-----A-AATGCAC-ATAGAACATGAATTAAAATAAATGATAGA-TTATAT-C------TCT-CAAA-A----ACAAGAA--GGTA------GTTGGGAA-----AATA---AT------GTA--------ATAATGAGCTGTCCAGAATGTGATATAC---CAG---GTACACTTA-TAGTGG-AAAAGGAT-CCAGATTAGGACAG-CCTTTTACATTTGAT--AATT-G-----CATAGTCTGTT-GTTAGA-GTGCACAAGAGGTGACT-ATGTGC-CT-TAGCGTTTAGTT-TTCTG-AAATTGATGATTTCGGACCGCGATAGAGTGTGTC-AGCGTG-GGGACGTCCAAGAAGGGTAAGAAATAAGTCATATTC--TGGCAGAG-CGCAAAGTTCAGCTTCCAGGTG-ACGCTAAATAA-GTTGGATATAGAGTTCCACCA-GTAGTCTG-TGGTTTGTAAGAAACGGACAGGAA--TTGCTGCGTGGAAAAAAACGTCTGTGATATA-ATGACCGCACAGAGCACATACAACTGGA-ATTT---CTAA--GGGT--TTGGACGCAATAAGTTTGCA--CGTAA-ATTTAAGATTCTGAATATCGT-CGAGTGAG-TTTGCAGACTGCCACATGTT-GTATTGG-TTTAGAG--ATGCAAAAG-ATGGCGTTGAAGCGGAAGAAGTCCGG-ATCAATGTTGGTTCG--AT--GTT---G-CGT--A-----GGAGT-GGTTTG-GAA-T-AT-GTACA-CGGA----AGAGCGAACTATAGTTTTCCAGGATGATTTCGG--TGGGAATGATCCGGTACAAAGCCAGG-TATG--A-GATAAT-C--AG-ACA-GTTGGTAAG-TCTGCAG-GAGAGAGATGACATCC-GGAATGA--------------TTTCG-GAAAGCTGATAC-AAA-AAAGAGAAC------AAACGT-TGAT-----GCAAAAATCTTTTT-AGGAAGGT--G---AGCT-GTGTCCATT-CGGTAAAGT-CTGCCAAAGAATAGAA-GTTTTCTT-GTAT-CGATTTCAGCTGT--TGATTGGTAGAGTATTCAAGAA-T-GTTC-AC----AAATATCTGATCTGGTGAGT-TTTGG-GAGTTTGAAAT-TTGTTTGATAATTCCATG-CTGAAGTGTATT--AAGAC-GTCTTATA-TCTTCTTTAATGGTGT-TT--ATTCCACAGTTCACAGCCATAAAGGATAGACGA-TAC-AACAACTGTT--TGTA--TAAATGATCCATT-GTCATGG-GTTTAACACA-G-ATATG---TCCATG-TCAGATA--GTGCGT--AAACGATTTTCACCCCTTTTGAA-CAGGCATTTGAG-ATTCG-AGAGC--GGATTTGGTA-TTGCTGTTGATCAGAATCCGA-GATGATCATACACTTGTCCATA--TTGTAATTTGGAAATTCCCCCAAGATTAT--GTCTATATTTGCAGG-CTGTTTTTGACCTTTTGCGT-GGAC-ATAAAGACACAGGATTTAGA--AGCGTTGAATATCGAACAAGCCATTTGCAAGCATATTT-GTAAGC--AACGT----TCATCATTGATTGTAGAGCGGAA-GGGA-AAGGGC-GATGCAAG-CAATGTCATCTGCTAGAGCTGGTGAATGGT----AATTTTTGTCGAACACCACGGGA--AGTTAG--TTGTTAGGAGT-TGCAGTTCG-TCT-AGCAGGCTGTTGATGAAGAACAAGA-TATAGAAAAGTT-GATAAAAC-ACCACCTTGTCGAACGCCTTGTTGG-ACGGGAAAC--CTAGG-TGATTT-GGTTTGGGTGACAATTAC-CGCACT--TTC-AGTATT--ATAGTTGACAA-TCGTCAATGATATT-CCAAA-TTTGCC-TC------TAATACC-AAATT-GTGCAACTT--------GACCA-TTAGCCTC---T-TCTCCACACAGTA-TCAAATGC-CTTACT-G---TGTCTATAAAATGC-TATGTATACGTTACTGCC-CATTTCTAA-GTTTGTGATACATGGTT
gi|10 : g---GAAAAAGGAAATGTGATGCTGACAAAAGGAG-CCAGACTGGGGCAGTCCTTTTGTGCGT-------TT-G-----TATGGCCTATT-GT-AAA-GTGTACAAGAGGTGACG-ATATTTACG-TAGCGATTA----C-ATG----TCGATTATTTCCTAATGTGATAGAAC-TGTC-AGCGTG-GG-ACGTCCGAGCACGGTA
gi|11 : GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGATGATAAAATTATT-CCCGGATTTT-----GCAGACTATAAGTTG--TATCACA-G-ACCTATGTTATAAT
gi|12 : tttttttttggggggggGATAAAAC-ACTACCTCGCCGGATGCCTTGTTGG-AAGGGACAC--C-AGTATGATTTAG-TCTGATTGACAATTAC-TCCACT--TTC-GTTA-T-CATAG-TGACAG-TCGCCAATGACCCT-CCAAATTTTGCC-TCTACCGGTAATACCTAAATT-GTGCAAatatagtatttatatttgttgtatatatttttataatacaatgtcatatttgaacaa
gi|13 : tTTGTTATCCT-TATTATTCA-----TAATACA---ATACATGTA----CA------AAGGTAA-A-CTATAA-T-TTTAC-ATTGTT-GGTG-ACATA-C-ACACTATAC-ATAAATCATGAATTAAAA-ACGTGATTGA-TTATAC-C------T-T-CACA-A----ACAACAA--GAGAAAAGGAGAT
gi|14 : ATAGAAAAGA-CGACAAA-C-TCCACCCTGCC-------TTGTAAA-ACCGGAAAC--C-AAT-TGGCCTGGGTTTGATTTACAA-CAA-TGCACTAGTT---GTATT-TGTA--TGACAG-TCGTCAATAAT
gi|15 : TTCATC--TTTTATT-TCCTCTATTATACAGAGATTAATG-AT--ATACATGTATATACATTTACAAAGGGTA-A-CTATAA-T-CTTAC-ATAATG-AGTG-ACATA-C-A-AA-AAAC-ATAGCACATGAtgaccagagattc
gi|16 : CTGCCACATACA-G-ATTGG-TTT-GAG--ATGCAAAAG-ATGGCGTTGAAGTGGAAGAAGTCCGG-ATCAAGATTG
gi|17 : GTGG-AAAAGGAT-CCAGACTAGGGCAG-CCTTTTAGATTTGAT--AATT-G-----CATAGTCTGTT-GT-AGA-GTG
gi|2 : AATAGTCCATATTCCCTGG-AGAGGCGCAA-GTT-AGACTCCAAGTGTAC-CTGAATAGTGTTG-ATATCGAGTTC-ACCAAGTAATCTGCTGTTTTGTAAGAAACG-ACAGGAAAATTGCTGCGTGGGAAAAAACGTCT-T-ATATATAGGACCA-ACAGAGCACATACACATGGATATTCTTCCTAATAGGGCAATTGGACGCAATAAG-TTGCAAACGTAATATTTAAGATTCTGA--TTCGTCCGAGTGAGTTTTGCAGACTGCCACATGTATA-GTTGGTTTTAGAGATATGCAAAAGCATGGCGTTGAAGCGGAAGAAGTCCGGCATCATGATTGTTCCG------GTT--TGTCTT--AAACGGTGAGTTGGTTTGTGGTATATT-GTTCAGCGGA----A-AGCGAACTATAGTTTTTCCGGATGATTTCGGCTGGGAATCGATCCGG-TAGAAGCCAGGTTATGTTA-GATAAT-TCGAGTACAGGTTGATAAGATCTGCAGTGAGAGAGATGACAT-CAGGAATGAAGCCCATTTTGAACTTTCGAGATAGCTGAAACAAAA-ATAGAGAAC------AAACATAAGATG----GTAAAAATC-TTTT-AGGAA-----GTGTAGCT-TTGTACAGTGCGGCAAAGTCCTGCCA--GAATAGAATGTTTTCTTAGTATCCGATTTCAGCTGT--GTA-TGGTAGAGTATTCAAGAATTGGTTCTAC-GTCAAATATCTGAT-TGGTGATTGTTTGGTGAGTTTGAAAATTT-TTTTATACATCCATGCTTGAAGTGTACTTAAAAACGGTCTTATC-TCTTCTTTAATG--GT-TGTTATTCCACAGTTCACAGCCATGAGAGATAGACGATTACAAACAACTGTTTGTGTA--TAAAT-ATCCATTGGTCATTG-GTTT-ACACGAG-ATATG---TCCATGATCAGATCAAGTGCGTAGAAACGATTTCCATCCC--TTGAAGCAGGCATTTGAGTATTCGAAGAGCTTGGA-TTGGTATTTGCTGTGAATCAGAATCCGA-GATGATCATAAACTTG-CCATAATCTGTAATTTAGGAATTCCC---AAATTATGCGTCT-TA-TTGTAGGACTGTCTTTTACTTTTGGCGTGGAACGAT-AAGACACAGGATTTAGAATAGCGTTTAA-ATCGAA-ACGCCATTTGCAAGCATATCTGGTAAGCCAAGCGT----TCATCATTGATTGTAGGGCGGAAGGGGATAAGGGCTGATGCAAGCCAATGCCA-CTGCTAGAGCTGG-GAATGATAAAAAATTTTTGTCGACCACCACGGGGGTAATTAGAATTGGTAGGAGTATGCAGTCAGTTCTGAGCAGGC-G-TGATTGAAAACAAGATTATAGAAAAGTTTGA-AGAACAACCAACTT-TCGAACGCCTTGTTGGCACGGGAAACGAC-GG---GATTTGGGTTTGTTGGACAATTACGCGCACT--TTCAAGTATGATGAG--TGACAATTCGTTAATGATATT-CCCAATTTTGCCGTC------TAATACC-TAAAC-GTGCAACTT--------GACCATTTAGCCCCTCGT-TCTCCACACAGTAATCAATTGCTTTTACTTG---TGT-TA-AAAATGC-TATG-ATAAG-TACTGCCTCATTTCTAATGT---TGA-ACAAGGTT
gi|3 : agAAG-ATGACATTGAAG--------ATCCGG-ATCAAGGTTGGTTCGTGGT---TT--TA-CGTTGA-----GAAATTAG---G-GCT-T-TTTGTATA-CAGA----CGAGCAAACTATAGACTTTAAGTATGATTTCAG--AGGAAATGATCTAGCTGATAGCCAGG-TATG--AAGATGCTAC--AATA---GTTGGTAAG-TCTACAG-GAGAAACAAGACA----G---------------------TTCTAGAAAGCTGAT-T-AGATATAGACAACTAAGGAAAACTT-TAGTGTGATGCAAAAATC-TTTTAAAGAAGGTACATGTAGTTGGTATATATTG-AACAAAGT-CTGCCAAGGAAAAGAA-GTGTCCAT-GTGT-CAATT---ACTGCAATGACTGGTAAGGGATTTAAGAATT-GTTC-ACAG--ATATATATGATCTGGTGACT-CTT-G-GAGGTTGAAAA----GTTAACAGTTCCGCG-TACAAGTGTGTT--AAGAC-GTCTT-TAGTCTTCCTTATTA-----TA--ATTCAAAAGTTCACAGACGTAACGAGCGGACGA-CAC-AAAAACTGTTC-TGCA--CAGACGAAAC
gi|3 : gCACAGACGAAACGAACGGACGA-CAC-AACAACTGTTC-TACA--CAGATGAGGCATT-GCCATGGT-TTT-ACTCG-G-G-AT----TAC----TCGG-----------------GATTTTCCACCCTTTTGAA-CATATGTTAAAG-ATTCA-AGAACgaacggacgacacaacaactgttctacacagatgaggcattgccatggttttactcgggattactcgggattttccacccttttgaacatatgttaaagattcaagaac
gi|4 : gaagatgacattgaagatccggatcaaggttggttcgtggttttacgttgagaaattagggctttttgtatacagacgagcaaactatagactttaagtatgatttcagaggaaatgatctagctgatagccaggtatgaagatgctacaatagttggtaagtctacaggagaaacaagacagttctagaaagctgattagatatagacaactaaggaaaactttagtgtgatgcaaaaatcttttaaagaaggtacatgtagttggtatatattgaacaaagtctgccaaggaaaagaagtgtccatgtgtcaattactgcaatgactggtaagggatttaagaattgttcacagatatatatgatctggtgactcttggaggttgaaaagttaacagttccgcgtacaagtgtgttaagacgtctttagtcttccttattataattcaaaagttcacagacgtaacgagcggacgacacaaaaactgttctgAGTAAGTTGTTTGC---AATTT-----A----CT-----TTGCATGTCACATTTA--TA-ATT-TAATCATGGCTTTC--ATTCATTCATTTCTTTCATCCTTTTTATT-TCCTCTATTA--CAGAGATTAATGGATTAATCCATGTAAATACA------AAGGGTATA-CTCCAAGTATTTAC-ATTATG-AGTGGACATATC-A-AATACACCATAGAACATGA--TAAAATAAATGATAGA-TTA-ATAC------TCT-CAGATA----ACAAGAA--GGTA-------TTGGGAA
gi|4 : tATACACAAGGAAAAAATACACTTAATA-TGA-AAAAGGATACCAAACTAGA-CAGGC--TTTACATTTGAT--AATTTG-----CA-AGTCTTTAAGT-AGAAGTGCACAAGAGGTGACTAATGTGC-TTGTAGCGTTTAGTTAT-CTGAAA-TTGATG--TTCGGACCGCGATAGAGG-TGTCAAGCGTG-GG-ACGTCC-AGAAGGGTAtaatgtaatactttatacacaaggaaaaaatacacttaatatgaaaaaggataccaaactagacaggctttacatttgataatttgcaagtctttaagtagaagtgcacaagaggtgactaatgtgcttgtagcgtttagttatctgaaattgatgttcggaccgcgatagaggtgtcaagcgtgggacgtccagaagggta
gi|5 : tagtaagttgtttgcaatttactttgcatgtcacatttataatttaatcatggctttcattcattcatttctttcatcctttttatttcctctattacagagattaatggattaatccatgtaaatacaaagggtatactccaagtatttacattatgagtggacatatcaaatacaccatagaacatgataaaataaatgatagattaatactctcagataacaagaaggtattgggaataatgtaatactttTATATACA------TAGGATA-AACTATGA-T-TTAAC-ATTATC-GGTG-ACATA-CAA-AATAGACGACAAAACATGAATT-AGATAAAGTATAGACCTATAT-TGTACAGTGTACATA-AAAATACAAGAATGGGTAAAA-GAGATGAGAAGTGGGAACATTTATTCTAGGGTACTTTGGAAACATTGA---GTTCGGATTGTGACGCA-----------TAC-TTTAATG--AG-AAAAGGAG-CTAGACTAGGGCAGTCCCTTTACG--TGATTAAATT-GTCGCTCATA-TTTTTT-GT-AGA-GTGCATAAGAATTGACT-AGGT-C-CT-TAGAGTTTAATTCC-CTG-AA-TCTAGAATTTCTAAACGTTATACAAC-TGTC-ATCGTGTCG-ACGCCTGAAAAGGANAA
gi|6 : aTGATTCTATG-TTTAAGTGTGTT--AAGAC-GTCTTAAA-TCTTCTTTATTA--GCGTA--ATTCCAAAGTTCCTAGCCATAGAAAACGGACGG-CAC-AACAAATGTTT-TATATCTAGATGAGTCATT-GTCATGGCGTTT-ACTCG-GCATACGTTTTCCAT
gi|6 : taacAATCATT-GTCATGGCGTTT-ACTCG-GGATATA---TCCATG-CCGGAT---G--CATA-AAACG-TTTCCCACTCCTTTGAA-CAGGCGTTAGAG-ATTCC-AGtcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgattactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|6 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacTTACTGTAAATAAGAATTCAAAGGTGGTCGTAAACTTGTCCATAT-CTGTAATTT--GCATTTTCCCAAAGTTATactgtaaataagaattcaaaggtggtcgtaaacttgtccatatctgtaatttgcattttcccaaagttat
gi|7 : taactgattctatgtttaagtgtgttaagacgtcttaaatcttctttattagcgtaattccaaagttcctagccatagaaaacggacggcacaacaaatgttttatatctagatgagtcattgtcatggcgtttactcggcatacgttttccattcctttatatggtattatacctggaatctctaacgcctgttcaaaggagtgggaaacgttttatgcatccggcatggatatatcccgagtaaacgccatgacaatgaAAAC-TCCACCTTGCCGTACACCCCGTAAA-ACTGGAAAC--C-CAT-TGAACTGGGTTTGATTGACAACAAT-TTCACTGGTT---GCATT-TGTA--TGACAA-TCGTCAATAA-ATGACCAGAGATTCCA-TG------TAATACC-CATTTAATATGATTTCATAAAAAGACCAT---GTCTC---CATGGCCAAACTGT-GTCGAAAGCTT----TCGAAATGTCTATAAA--GCTTAACTAAACATTGCTGCCTGAATGCCATTTTCTGTGA
gi|8 : GATTGTCTTTGTCCTTTTGCATGGGACGATAAA-ATACTGGATTTAGA--AGCATTCTAT-TCGGA-GCGCCACTTGCAAGTGTATTT-GTAAGC--AATGCATGCTCATCATCGTTTGGAGAGCGGAAGTAGA-ATGAGC-GATGCAAG-CAATGGCATCTGCTAGAGCTGGAGGATGGT----AATTGTTGTCGAACACCAC-AAAGTAGTTAG--TGTTTAGGATT-TGAAGTTTGTatg
gi|9 : tgctAAGGTTCTGAATTTTAC-TGAGGGAGCTT-GCAGAATGCCACTTTCA-G-GTTGG-TTTAGAG--GTG-------ATG---TTGAAGCGGAAGAATTCCGG-ATCAAGATCGGTTCG--GTTAATTCTTG-CGT--------TGA-TTAGTTTG-ATT-T-TT-GTACA-CGGACGGAAGAGAGAACTAGAGTCCTCTAGGATGATTTCAA--AGGAAATGATTCGctaaca