lowQualScore : 111111111111111111111111 11111111111111
lowQualScore : 111 3333333 1111111111 11111 111 1111 1 000000000000000000000000 1111111 1111111111 555555555555555555555555555555555555555 111111 11 11 333333333 33333 22 222 222222222 11 2222 11 11 5555555555555555 11 111 22222 11 111 2222 11 1111 1111 11 1 8888888888888888888888888888888888888888888888888888888 1 1 1 11 2222 1111 1 111 11 22222222222 222222 1 22222222 111 1 11 111 1 333 1 5555555555555555 11 1 111111 1 11 1 111 111 1 1 1 11 1111 1 111 1 11 1 2 22 2 4444 11 2 1 44444444 2 00000000000000
lowQualScore : 6 000 3 2222222 77 1 5555555555 5 44444 5 5 5 5 5 000 7777 5 5 1 5 1 333333333333333333333333 0000000 7777777777 3 5 77 5 88 5 5 5 5 7 999999999999999999999999999999999999999 77 6 3 66 5 5 5 77 222222 6 9999 6 44 33 6 99 66 6 6 777777777 6 11111 77 000 8 555555555 11 5555 11 8 0 8 0 8 6 8 1 8 8 77 3 8 6666666666666666 77 0 1 0 2 8 88 444 88 88 0 22222 11 6 6 2 9 6 1 6 6 444 0 1111 3 11 7777 7777 99 8 0 6666666666666666666666666666666666666666666666666666666 0 2 0 0 99 7777 4444 8 111 5 33 3 44444444444 888888 0 0 99999999 777 2 0 33 2 777 0 222 0 0 3 1111111111111111 8 3 9 66 0 555555 8 8 0 8 11 0 444 0 777 0 3 0 3 0 33 1 2 7777 0 111 0 11 0 3 6 6 8 2 3 0 2 2 55 0 2222 33 0 88 0 44444444 0 44444444444444
lowQualScore : . ... . ....... .. . .......... . ..... . . . . . ... .... . . . . . ........................ ....... .......... . . .. . .. . . . . . ....................................... .. . . .. . . . .. ...... . .... . .. .. . .. .. . . ......... . ..... .. ... . ......... .. .... .. . . . . . . . . . . .. . . ................ .. . . . . . .. ... .. .. . ..... .. . . . . . . . . ... . .... . .. .... .... .. . . ....................................................... . . . . .. .... .... . ... . .. . ........... ...... . . ........ ... . . .. . ... . ... . . . ................ . . . .. . ...... . . . . .. . ... . ... . . . . . .. . . .... . ... . .. . . . . . . . . . . .. . .... .. . .. . ........ . ..............
lowQualScore : 7 000 0 6666666 99 4 9999999999 7 33333 7 7 7 7 7 000 6666 4 7 4 7 9 777777777777777777777777 7777777 3333333333 9 7 99 7 77 7 7 7 7 0 999999999999999999999999999999999999999 99 7 5 44 7 7 7 99 333333 7 3333 7 33 77 7 22 55 7 7 333333333 7 00000 00 666 0 444444444 00 0000 00 2 8 0 8 0 8 0 4 0 0 00 0 0 8888888888888888 00 8 4 8 8 0 88 000 66 88 8 88888 22 7 7 5 0 7 0 7 7 000 8 0000 8 00 0000 0000 00 0 0 6666666666666666666666666666666666666666666666666666666 0 2 0 0 88 8888 8888 8 000 0 88 5 22222222222 888888 0 8 22222222 555 5 0 00 0 555 0 888 0 2 2 2222222222222222 8 2 2 55 0 888888 0 0 2 0 00 4 000 8 222 0 2 0 2 0 22 2 5 0000 0 000 0 00 8 3 7 7 0 0 0 0 2 0 55 0 5555 88 0 00 0 22222222 0 00000000000000
consensus : TTG-CAGGGG---TGGTGT-GT--TGT--TTGTAG-TAGA-----AA-TAAC-----C-AA-CTCC-TGGC-T-AA---GG-N--TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A--TAT------TGGA-A-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAANT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATA-TT----AAGT--ATA--ACAAAAGGC-AATATA------TTTTAAT--TACC----TA--TCTATG-GGACAA-GGCCCAATTCCCCAA-GCAAT-A-AAAT-TGCTACCTGGATGTTTCT-TACCTAAAT-T--ATTT--ATAAGCAAATATTACATTACAG-TAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAANAACTTTCAAA-GTGGT-ATTT-AC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTT-GA-AATT-AGCTAA---TA--TA-TATGA-AGAT-A-TAT-GTTGAGTAAA-ATTA---GTACTT--ACT-GTCAGG-TCTGGA-TC-TAAGGTCT-C--AA-A--GTCTTT-TCAAATTCAA-A-TATTCGA--TATNCA--AAAACTN--CTCAA------CGTA-AAATCACT-GC-----CAA---CCTGACCAAAA-ACTTG-CGAGATTCTAA---CTGAATA-AAACTC-CAGA-TCTACAGCCAA--TG-AAATG-----ACCGTTTTCACTCACCCATAAC-ACT--TA-NGAAATAAA-GGGG-TGGATCCGG-GA--ATTTGGCNTAA---ATAATAAA-AT-ATACCTTTAATCTAAT-ATG-CAC-AAATTATGTTTATTAGAA----TATG-GC-A-TTAAAT-ATATATACAA--GTTAAAAA-CACACTGC-T-ACA-TTCCTCCCCCTCTCTGAAAAATNACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTNNT-TACATGAAACAATTAAAATATCCATCTNTCATCATAAAATATGTACAGAATTCACTTA
Reference ( gi|6 ) : TTG-CAGGGG---TGGTGT-GT--TGT--TTGTAG-CAGA-----AA-TAAC-----C-AA-CTCC-TGGC-T-AA---GG-G--TTCATTAT-CGTCAATTTATT-AACAT-------AGGCA--TAT------TGGA-A-A--TAT-----ATA-TGGTCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAATCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATA-T-----AAGT--ATA--GCAAAAGGC-AATATA------TTTTAAT--TACC----TA--TCGATG-GGACAA-GGCCCAATTCTCCAA-GCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAATGT--ATTT--ATAAG-AAATATTACATTACGG-TAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTCTAAA-GTGGT-ATTT-AC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGT--GA-AATT-AGCTAAATGTACATATTATGA-AGAT-A-TAT-GTT-AGTAAA-ATTA---GTACTT--GCT-GTTAGG-TCTGGA-TC-TAAGGTCT-C--AA-A--GTCTTTATCAAATTCAA-A-TATTTGA--TATTCA--AAAACTT--CTCAA------CATA-AAATCACT-GC-----CAA---CCTGACCAAAA-ACTTG-AGAGATTCCAA---CTGAATA-AAACT--AAGA-TCTACAGCCAA--TG-AAAT------ACCGTTTTCACTCACCTATAAC-ACT--TA-GGAAATAAA-GGGG-TGGATCCTG-GA--ATTTGGCTTAA---ATAATATA-AT-ATACCTTTAATCTAAT-ATG-CAC-AAATTATGTTTATTAGAA----TATG-GC-A-TTAAAT-ATATATACAA--GTTAAAAA-CACACTGC-T-ACA-TTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGA-ATGTACAA-GTATA----TAC--AAAATG-ATCTATT-TACATGTAA-AA--AAAAT-TCCATCTGT------------TGTACAGAATTCACTTA
gi|8 : TTG-CAGGGGATGTGATGT-GT---AT--TGGTA--TACATTTTTAA-TAAT-----C-AA-CTCC-TGGC-T-AA---GG-T--ATCATTAT-TATCAATTTATT-AACAT------------------------GGA-G-A---AT-----ATA-TAGCCC-TAAAAGA--CA-AAATAT-TAACAATAAAT-A-TCACAGC-GATTTA-CAATGAA-------AA---G-----------A-A------------TG--TAC-AT---TTCAATATTTAAG-AGTT-AT-CT-CCCTTAA--AACGAA---TTCCACTTTACT-CAATA-T--ACTCAAAATAC-GTCATATCT-G--CATTACAAAT-AATGTA-A-CAC--T----ATAAAAATATG-TTT---AAGT--ATATAACAAAAGGC-AATATA------TTTTAAT--TACC----TA--TCTATG-GGACAA-GGCCCATTTCCCCAA-GCATT-A-AAAA-TGCTACCTGGATGCTTCT-TACCTA--------TTT--ATAAG-AAATATTACATTACAG-TAC-TATA---TA-CAC-TATAATACTTAT--ATAAG-CA-TATAT-CGAGGCGAAAGAACTTTCAAA-GTGGT-ATTT-AC---TACTT-T--TAATGT--TT----AAACTTTCACTCT----TCTCTCAAACAAT--GA-AATT-AGCTAAA--------------------------ATT-AGTA-------------CTT--ACT-GTCAGG-TCTGGA-TC-TAAGGTCC-T--AA-A--TTCTTTTTAAAATTCAA-A-TATTCTA--TATTCG--A----TTGACTCAA------AGTA-AAAGCACT-GC-----CAA---CCTGACCAAAA-ACTTG-CAAGATTCTAA---CTGAATA-AAACT--CAGA-TCTACAGCCAT--TG-AAATATCTAAACCTTTTTCACTCACCCATAAC-ACT--TA-TGAAATAAA-GGGG-TGGATCTGG-GA--ATTTGGC-TAA---ATAATAAA-AT-ACACCTTTAATCTAAT-A-A-CAC--AATTATGTTTATTA-AA----TA
gi|11 : tTTG-CAGGGG---TGGTG--GT---GT--TTATGG-TTGA-----AA-TAAC-----C-AA-TTCC-TGGC-T-AA---GG-G--TTCAT-AT-CGTCAATTTATT-AATATGTAGAATAGAAAACTAT------TGGA-A-A--TAT-----AT---GGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATCAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-TCCTTAA--ATCAAA---TTACACTTCACT-CAATA-T--ACTCAAAATAC-GTTACAGCT-A--CATTACAAAT-AATGTA-A-CAC--T----ATGAAAATATATT-----AAGT--ATA--ACAAAAGGC-AATATA------TTCCAAT--TACC----TA--TCTATG-GGACAA-GGCCCAATTCCCCAA-GCATT-A-AAA--TGCTGCCTGGGTGCTTCT-TAT----ACCT--ATTT--ATAAG-TAATATTTCATTACAG-TAC---CA---TA-AAC-TATG----TT-------AA-CA-TACAC-TGAAATGAAATAACCTTTAAA-GTGGT-ATTT-g
gi|12 : TTG-CAGGGG---TGGTG--GT--TGTGTTTGTAG-TAAA-----AAGCGAC-----C-AAACGCC-TGTC-TTAA---GG-T--TTCA--AT-TATCA--TTATT-AATAT------------------------GGAGA-A--TAT-----GTAATGGCCCCTAAAAGA--CA-AAATAGAGAACAATAAATCA-TCACATG-AATTTACCAATAAA-------TACCTGAATGAAATATTA-A------------TG--TAC-ATAATTTCCATCTTTAA--AGTT-AT-CTCCCCTTAA--ATCAAA---TTCCAC-TTACTCCAATA-TCAACTGAAAATAA-GTTATAAAT-G--CATTACAAAT--ATGT--A-CAC--TATTGA-AAAAATATA-TTAAAGAAGTA-ATA----AAAAGGC-AATA-A------TTGTAAT--TACCG---CA--TCTATG-GGACAAGGGCCCAAATCTCCAA-GCAATAA-AAAT-TGCTA
gi|9 : ttgTTGTCAGGGG---TGGTGT-GTGCTGT--T-GTAG--AAC-----AT-TCACACCTCC-CA-CTCC-TGTC-T-CACACGG-A--GTCATTAT-CGTT--TTTA------AT-------AGAGA------------GAA-G-A--TCT-----TTAATGGCCC-TAAAAGGACCACAAATAA-TAACAATACAT-AATGACAGTTGATG-A-CAATAGAACGTTCATG---G-----------A-AAACTACTATAATTGGTTAC-ATTATTTCCACCTTTTAT-AGT--AT-C--CCCTTAACAAGCAAAATTCTCCACTTTACT-CAATAAT--ACTGAAAATAAAGTTATAAAT-GTCCATTACAAATTAATGTATA-CAC--TTAT-G-AGAAATATA-T-----AAGAGAATA--ATAAAAGGC-AATAT-------TATTGATAATACCCGAGTA--CTAA-G-GGACAA-GGCCAAACTC-CCAATGCAAT-ACAAACATGCTACTGGAATCTATCT-TAT-----TAT--ACTCTAATAAGCCAATA-TAC-TTACAG-TACTTATACAGTA-AAC---TAATACGT-----TAAGCCG-TATACTTGAGCTGAAAGAACTTTCGAACGTGGTCATTT-AC---TACTT-T--T-ATAT--TTAAGAAAGCTTTCCCCCTCGTGTCTCTCAAACAGTTGAA-AATTAAGCTAA
gi|13 : tgTTG-CAGGGT---TGTTG--GT---AT--TTATAGGTAGA-----GA-TAAC-----C-AA-CTCC-TGGC-T-AA---GG-A--TTCAT-AT-CATCAATTTATC-ATCAT-------A-------AT------GGGA-A-C--TATGGAGAATG-TGACCC-TAAAAGA--CA-AATTAG-TACCAATAAAT-A-TCACAAT-GATTT--CAATCAA-------TA---T-----------A-A------------TG--TAC-ATAATTTCACCCTTTTAG-AGTT-AT-CT-ACTTTAA--ATCAAA---TTACACTT
gi|17 : TTG-CAGGGG---TGGTG--GT---GT--GTATGG-TAGA-----AA-TAAC-----CCAA-CTCA-TGGC-T-AA---GG-A--TTCAT-AT-CGTGAATTTATT-ATCATCATA---AGAAA--TATGGAGAGTGGA-A-A--AAT-----ACA---GCCC-TAAAAGA--CG-AAATGG-TAACAATAAAT-A-TCACAGC-GATTTA-CAAT-AA-------TG---T-----------A-A------------TG--T
gi|4 : gAGGGG---TG-TGTCGT--TGT--TTGTAG-CAGA-----AA-TAAC-----C-AA-CTCCATGGCAT-AA---GGCGCTTTCATTATACGTCAATTTATTTAACAT-------AGCCA--TAT------TGGA-ACAGTTAT-----ATA-TGGTCT-AAAAGGA--CA-AAATA--TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------ACA------------TG--TACCATAATTTCAATCTTTAAGCAGTTTATTCT-CCCTTAA--ATCAAA---T-CCACTTTACT-CAATA-T--ACGGAAAATACCGTTATAAATCG--CATTACAAATTAATGTA-AACAC--T----G-AAAAATATA-T-----AAGTT-ATA--GCAAAAGGCCAAT-TACTACTCTTTTAAT--TACC----TAATCCGATGCGGAC---GGCCCAATTCTCCAA-GCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAATGTGTATTT--ATAAGCAAATATTACATTACGGGTAC-TATA---TACAACATATAATACTTAT--ATAA--CACTATAC-TGAGATGAAAGAACTTTCAAA-GTTGG-ATTTTAC---TACTT-T--TAATAT--TT----AAACTTCCACTCT----TCTCTCAAACAGTT-GACAATT-AGCTAA-TGTAGATATTATGACAGATTA-TAT-GTTGAGTAAACATTA---GTACTTTTGCT-GTTAGG-TCTGGA-TCGTAAGGTCT-CC-AA-A--GTCTTTATCAAATTCAA-ACTATTTGA--TATTCACAAAAACTT--CTCAA------CATATAAATCACTCGC-----CAA---CCTGACCAAAAGACTTG-AGAGATTCCAAAAACTGAATAGAAACTTAAGGA-TCTACAGCCAAATTGGAAAT------ACCGTTTTCACTCACCTTGAACCACT--TAAGGAAATAAA-GGGGGTGGATCCGGCGA--ATTTGGCTTAA---ATA-TATACAT-ATACCTTAAATCTAAT-ATG-CACCAAATTATGTTTAGTAGGAAGTGTATG-GCGA-TTAAAT-ATATATACAAATGTTAAAAA-CACA-TGC-T-ACAGTTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGATATGTACAA-GCATA----TACAAAAAATG-ATCTATTGTACATGT-A-AA--AAAAT-TCCATC
gi|19 : tCTTTAAG-AGTT-AT-CT-CCCTT-A--ATTAAA-------ATTTTATG-TAGCA-C--TCT-AAGGTAT--TTACAGTT-G--CATTACAAGT-CGCGCA-A-CACTAT----G-AATACTATA-
gi|14 : cATTTTTTTATACCTAA--------CC--ATACA-AAATGTTTCACTAAAA-TAA-TATT---TT-CGC-TATGATACCTATCGATAAG-CA-TACAC-TGAAATGAGATAATTCATAAA-TAAGT-ATTT-ACGCGT-CTT-CG-TAACAG--TT----AAGATTTCACTTT----TCTCTCAAACAGT--GA-
gi|15 : catttgtttgaacaatcaaaagtcaatcagt-TATAT-TGAGATGAGATAACTTATAAA-ATTGT-ATTT-AC---CATTCATCGTGATATAGTT----CAATTTTCAGTTG----TCTCTCAAACAGT--GA-TATA-GGCTA----TAC-TAGTATAT-ACAT-ATTGT-GTT-ACTGAG-ATTA---ATA------CA-GTCAGA-TCTGGACTC-AAATGTCTAC--AA-AATGTCTTCGTC
gi|10 : TATGA-AGAT-A-TATAGCTAAGTAAA-ATTATAGGTACTT--ACTGGTCAGGTTCTGGA-TA--AAGGTCT-CGGAACA--GTCTTT-TCAAATTCAATA-TATTAGACTCATAAA--CAAACTG--CTCAAAAAGGTCAAA-AATTTACT-TTCCTCACAACGGCCTGAC--AAA-ACTTGAAGAGGTTCTAA---CTGAATA-AAACTC-CAGATTTTACAGACCA--TG-AAATG-----ACCGTTTTC-CTCACC-ATGAC-ATTTGTA-GGAAATAAAGGGGG-TGGAT-CTG-GATTAGTTGGCGTAA---ATAATA-A-ACAATACCTTTAATCTAATAATGATAC-AAATTATGTTATTTAGAA----TATGTGC-ATTTATATAATACACACAA--GTTAAAAATCACACTGCTT-ACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATGAAACAATTAAAATATCCATCT
gi|16 : aTTT-TCAAACTCAA-A-TATTCGA--TATGCA--AAA-CTG--CTCAA------CGTA-AAACCACT-AC-----CGA---CCTGACCAAAA-ACTCT-CAAGATTCTGA---CTGAATA-AGACT--CAGA-TATTC--CTAG---------------ACC-TTT-----------TAAC-ACT--CG-TGAAATAAA-AGGG-TGGATCTGG-GA--ATTTGGCTTAA---ATAATAa
gi|18 : taATAAA-GGGG-TGGATCTGG-GA--ATTTGGCGTAATTTATAATAAA-AT-ATATCTAT--TCTAAT-ATG-CAC-AAATTGTGTTCATTAGAA----TATG-AC-A-TTAAAT-ATATATACAA--GTT-AAAA-CACACTGC-T-ACA-T
gi|20 : ----TACG-GC-A-TCAAAT-ATATATACAA--GTTAAAAA-CACACTGC-T-ACaca
gi|1 : AA--GTTAAAAATCACACTGC-TTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATGAAACAATTAAAATATCCATCTAT------------
gi|2 : AAAA-CACACAGC-T-ACA-TTCTTCCTCTTCTCTGAAAAATTACGTCCTCGT-CATTCTCTACAAAGA-ATGTACAA-ATATA----TAC--AAAATG-ATATATT-TACAAGAAA-AAT-AAAAT-ACCATCTTTCATCATAAAATATGTACAGAATTCACTTAttttatccatgaaaataaaaagtcgagaattcgacttaatacttgacaaaggtcccttgttctgaaatacacactcggatcgtcacatttctagggagctccttaaaatccattcatttctttcaaaaccctggcatctctgtccttgcagaatgttttagaagaacatgattggcctttcttcatcggaccacagttgcggtcatggttccctattcatcttacacaaagttttcacccgtaaacattcaggctctcgttctagtcgctggttaataaggcgtgtatgcatacaggtgaactcgtatcagtctgtctctgactgtcagcgtgcgctgctggctttagtttcagtgtctggaatcttctgcttgtggcgacaggttctttgcatctggcgagaatctcctactcatagcagtcatttcctaagagtgtttctctccaagcatgagcagcgtcctcaacttgttgaccatgtgcatcgctcgtattcagttgccaggaaacacaattactgggtgaatgatgtcgtgttcctactggaatctcaatgaagactgtgcttccttcctcattccgagtctaatagggtttacttgcaagttgactgagtgtcaagagcgctgtcttcaccctttcagtctctttctgggtttttggtttgtgccaggacgattaggtggaactggtttgcggaagtactaacttttttggttggaattgctgcaacctgtcaattggtgaaagtagagtttctggcagaatccctcactgctatcgcaacagccaatcttccatctgtatttgtaaacaaagaaagtgtctgtgatttgggctggctcacactatatacgacttcttcccatcttccgctaacttgtgacgatccatgcaagcaggctactaatcggtgttagtctaagacactcgatctgccctcttccagtaacagacttcctctggacttgagatcatagtctgtctttttttgtcgctccgcctgctttacgtgtaagctcctgagtgctaactggatagggaatttcttcaaatcgctactttaagggttgtctatgtgatcttatggtaagggaaatacttgatgttcgttcgttcggtctaaaatcaaattctgattctatggc
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|3 ): ACTATACAAAGGTCCTTGTTGATATACATATCGTCTTCTTCACAACTTTCTAGGAGAGTCTTTAAAATCTCATTTCTTTCAAAACCCTGCAATGCTCGTCTTGCAGAATGTTTGTAAGAAATTTGGCTCTCTCGGACGCAATGCGGTCAGTGGTTCCCTGTTGCATCTTACAAAGTTCCACTCCGTAACCATTCAGGCTTCTCTTCTAGTCCTGGTTGATCGGCGTGGAGCATAACAGAGTGAACTCGTATCATCTGTCTCTGATTTCAGCGTCAGCTTGGTTTCAGTTTCCAGGCATCGTCTGTTGGCCCACGATTCCTTGTGAGGCTCTATCCATATCAGCAAGTCCTCCTCTTCTGCATCATGCTTCTAATGTTCGGTACACCATATGCTTCATGCGAGCCTTGCCCTCAAGTTTGGGAAAATCGACCCTCGTTGCAGTTCAATTCATCTTAATTTGATTATCAAGGCAACTACAAAAACTAAGGGGAACTATTTCATGGTTTCTTACCTGTTTGACGTTGAACAAAGACTGCGTCATGTGATTTGCGTGGATATCTAGTATTTTCGTGAAGACTGCTTCTCTTCATCCGAGATCTATAGTGGTACCATATATACTTTGGATACGTGATTACAGGTGTCACTGTCTTCCCCTCTCTCTCATATAGTCTCCTCTTCTGTAGTATATAATTAGATTTGTCTGCCGCATTTCTCGATAGGAATGGGTGGGATCATGTTTTGCGTATTTGAATACTGCAACATAGTCCATTCCATAATTCCCGTGTAAAAGTTAAGTTTCTTGGTGTCAGACATCCTCACTCTCCAACATCCATCTACCCTCTGTACTGCTTGAAACAGGATATCTTTGATGGCCTGGTTCGAAATCAACGAAGGTAACGTCGCACAGAGGATCCTCTCCCTACTTGTCCGCTAACTTTGTGACACTGACTCCATCAAGGGTCATTCCTACTTATCTTCACAATACTAGCACCTATCTCCCCTTCCGAGAGACAATCCTCCTGTCTGACAATACGGTTCGTCTTTTTTGTCGCTTCCTTAGTGCGTTTACGATGTAGGGACTACTAGGAATTGCTAACTGGAGAT
Unaligned ( gi|5 ): ATAAAATATGTACAGAATTACTTAATACTTACAAATGGTCCCTTGTGTGAAAATTTGAACTCAGGTCTTCTTCACAATTTCTAGGAGAGTCTTTAAATCTCATTTCTTTCAAAACCCTGGCAATGCTCGTCTTGCAGGATGTTTGAAAGAAATTTGGCTCTCTCGGACCAAGCGGGTCAATGGTTCCCTGTTGCATCTTCACAAAGTTTCCACTCCGTAACCATTCAGGCTCTCGTCTAGTCCTGGTTGATCGGCGTGGAGCAATAACAGGTGAACTCGTATCATCTGTCTCTGATTCAGCGTCAGCTGCTGGTTCAGTTTCAGTGTCTTCTGCTTGTGGCGCAGGTCCTTTATTGCAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCCTCGACTCCAGTTTCAGGTAACACAATATAGGGACATCAGGTGATGAATGTCGTGTTCCTCCGGAATGTCAATGAAGACTGCTTCCTCCTCATCCGAGTCTAATAGGGTTTTGCAGTTGACTGAGTGTCACTGTCTTCCCTTTCCTTAGTCTCTTTCTGGGTTTTGGTTTGGCCGCATTGGTGGAACTGGTTTGGGATCCATTTTTGGTTGGAATTCTGCAACATGTCCAATTGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTTTCCAATACCATCTTCCCTCTGTATTTTGTAAACAGGAATGTCTTGATTTGGCTGGCTCATACAATATACGGATCCTCTTCCCACTTGTCCGCTAACTTGTGACGTTCCATCAAAGGCTACTACTTTGACAAGCCTCGATCTCCCTCTTCCAGTACAACTCCTCTGGACTTGAGATTCATAGTTGTCTTTTTGTCGCTCCTGTGCTTTACGTGTAGCTTCTGATGCTAATGGTAGATTCCTCAATCGCTCCTTTAAGTTGTCTATGTACTTGTAAGGGATCTTGATGTTTCGTTCGGCCTCTCTAATCCAAATTCTATGTCTATTGG
Unaligned ( gi|7 ): ATGAAGTCAGGTCTTCTTCACAATTTCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCTAGCCCTGGTTGATCTGCGTGGAGCAGTAACAGGTGAACTCGTATCGTCGGTCTCTGATTCAGCGTTAGCTGCTGGTTCAGTTTCAGGATCATCTGCTTGTGGCGCAGGTTCCATGATCACAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCATCGATTCCAGTTTCAGGCAACACAATACTAGGGGACATCAGGGTGATGATGTCGTGTTCCTCTAGGAATCTCAATGAAGACTGCTTCCTCTTCATCCGAGTCTAATAGGGTTTCTGCATTTGACTGAGTGTCACTGTCTCCCCCCTTTCCTTAGTCTCTTTCTGGGTTTAGATTTTGGCCGCATTGGTGGAATTGGTTTGGGATCCATCTTTGGTTTGAATTCTGCAACATGTCCAATCGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTCTTCCAACACCATCTTCCCTCTGTACTTTGTAAACAGGAATATCTTGATTTGGCTGTTTAATCACAATATACGGATCCTCTTCCCCCTTGTCCGCTAACTTGTGACGTCCACCAAAGGCTACTACTTTAACTAGCACTCTATCTCCCTCTTCCAGTACAACTTCTCTGGACTTGCTGAAGATCATAGTTGATCTTTTGATCGCTTCCTGTGCTTATACGGTGTAGCTTCTGAATGCAACTGGATAGGATTTCTGAATCGCTCCTTTAGATTAGTCTATTACTACTGGTAAG
Alignments
lowQualScore : 333333333 11111111111 1 7777777777777777777777777 1111 111111 1 444444444444444444444444444444444444444 1 11 333333 11 111111 2222 1 11 33333333 22 111 1111 111 1111 1111 1111 1 77777777777777777777777777777777777777 111 111 11 2222 1 11 111 111 11 22222 111 11 111 2 111111 333333 11 11 111 111 1111 1111 1 1 2 11 2 3333 11 2 22222 11 1111 2222222222222222 11
lowQualScore : 5 888 1 000000000 0 5 77777777777 5 66 5 5 5 5 5 888 9999 2 5 0 5 2222222222222222222222222 2222 444444 0 5 66 5 66 5 5 5 5 5 666666666666666666666666666666666666666 66 5 1 5 5 5 5 66 888 0 5 5 77 4 1 1 5 77 22 5 5 77 000000 00 6 6 99 99 6 6 999999 99 0000 6 6 6 6 1 5 33 2 6 22 22222222 00 6 6 111 6 6 5555 77 5 5 1 5 5 5 5 5 111 6666 1 99 4444 4444 5 8 8 8 22222222222222222222222222222222222222 8 444 111 8 8 8 44 0000 8 3 6 8 8 1 11 222 11 0 99 444 11 8 8 8 00000 444 8 33 444 8 3 8 8 0 666666 333333 5 0 5 22 8 99 1 6 6 0 6 111 7 111 6 0 0000 8 0 4444 8 8 8 8 99 1 1 6 1 0 88 0 6666 11 0 22 8 8 77777 11 7777 1 8888888888888888 22
lowQualScore : . ... . ......... . . ........... . .. . . . . . ... .... . . . . ......................... .... ...... . . .. . .. . . . . . ....................................... .. . . . . . . .. ... . . . .. . . . . .. .. . . .. ...... .. . . .. .. . . ...... .. .... . . . . . . .. . . .. ........ .. . . ... . . .... .. . . . . . . . . ... .... . .. .... .... . . . . ...................................... . ... ... . . . .. .... . . . . . . .. ... .. . .. ... .. . . . ..... ... . .. ... . . . . . ...... ...... . . . .. . .. . . . . . ... . ... . . .... . . .... . . . . .. . . . . . .. . .... .. . .. . . ..... .. .... . ................ ..
lowQualScore : 7 888 4 888888888 1 0 99999999999 0 99 0 0 0 0 0 888 8888 4 0 1 0 1111111111111111111111111 0000 888888 0 0 99 0 44 0 0 0 0 0 666666666666666666666666666666666666666 99 7 7 0 0 0 0 99 888 1 7 7 99 3 4 0 7 99 99 7 7 99 444444 22 7 7 22 22 7 7 222222 22 8888 7 7 7 7 4 7 00 2 7 00 22222222 77 7 7 777 7 7 5555 77 7 7 0 7 7 7 7 7 777 0000 7 22 2222 2222 5 0 0 0 22222222222222222222222222222222222222 0 000 888 0 0 0 00 2222 0 3 7 0 0 4 00 000 44 8 00 000 00 0 0 0 00000 000 0 00 000 0 2 0 0 8 666666 222222 0 8 6 44 0 00 0 7 7 7 7 777 5 777 7 8 0000 0 8 2222 0 0 0 0 22 4 4 7 0 0 66 4 2222 00 4 00 0 0 66666 44 0000 0 2222222222222222 55
consensus : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAAN-TGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATG----TA-ATATTATGA-AGA-TA-TAT-GTT-AGTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACT-CA-GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
Reference ( family-739 ) : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAANT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAAT-TGCTACCTGGATGTTTCT-TACCTAAAT---TATTTATAAGCAAATATTACATTAC-AGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAANAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATA----TA-----TATGA-AGA-TA-TAT-GTTGAGTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGC-GAGATTCT---AACTGAATA-AAACTCCA-GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCCATAA-CACTT--ANGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCNTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCCTCCCCCTCTCTGAAAAATNACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTNNT-TACATG-AAACAATTAAAATATCCATC----TNTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|1 : AA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAGA--TGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATCTATTTTTTATCCATGAAAATAAAAAGTCGAGAATTCGACTTA
gi|10 : A-----TATGA-AGA-TA-TATAGCTAAGTAAA-ATTATAGGTAC--TTACTGGTCAGGTTCTGGA-TA--AAGGTCT-CGGAACAGTCTTT-TC-AAATTCAATA-TATTAGACTCAT--AAACAAACT-GCTCAAAAAGGTCAA-AAATTTACT-TTCCTCACAACGGCCTGAC--AAA-ACTTGAAGAGGTTCT---AACTGAATA-AAACTCCA-GATTTTACAGAC-CAT--GAAAT-----GACCGTTTTC-CTCACC-ATGA-CATTTGTAGGAAATAAA-GGGGGTGGATCTGG---ATTAGTTGGCGTAA---ATAATA-AACAATACCTTTAATCTAATAATGATA-CAAATTATGTTATTTAGAA----TATGTGC-ATTTATATAATACACACAA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAGA--TGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATC----Tatacttgacaaaggtcccttgttctgaaatacacactcggatcgtcacatttctagggagctccttaaaatccattcatttctttcaaaaccctggcatctctgtccttgcagaatgttttagaagaacatgattggcctttcttcatcggaccacagttgcggtcatggttccctattcatcttacacaaagttttcacccgtaaacattcaggctctcgttctagtcgctggttaataaggcgtgtatgcatacaggtgaactcgtatcagtctgtctctgactgtcagcgtgcgctgctggctttagtttcagtgtctggaatcttctgcttgtggcgacaggttctttgcatctggcgagaatctcctactcatagcagtcatttcctaagagtgtttctctccaagcatgagcagcgtcctcaacttgttgaccatgtgcatcgctcgtattcagttgccaggaaacacaattactgggtgaatgatgtcgtgttcctactggaatctcaatgaagactgtgcttccttcctcattccgagtctaatagggtttacttgcaagttgactgagtgtcaagagcgctgtcttcaccctttcagtctctttctgggtttttggtttgtgccaggacgattaggtggaactggtttgcggaagtactaacttttttggttggaattgctgcaacctgtcaattggtgaaagtagagtttctggcagaatccctcactgctatcgcaacagccaatcttccatctgtatttgtaaacaaagaaagtgtctgtgatttgggctggctcacactatatacgacttcttcccatcttccgctaacttgtgacgatccatgcaagcaggctactaatcggtgttagtctaagacactcgatctgccctcttccagtaacagacttcctctggacttgagatcatagtctgtctttttttgtcgctccgcctgctttacgtgtaagctcctgagtgctaactggatagggaatttcttcaaatcgctactttaagggttgtctatgtgatcttatggtaagggaaatacttgatgttcgttcgttcggtctaaaatcaaattctgattctatggc
gi|11 : TTG-CAGGGG---TGGTG----GT---GTTTATGG-TTGA-----A-----A-TAAC--C-AA-TTCC-TGGC-T-AA---GGG---TTCAT-AT-CGTCAATTTATT-AATATGTAGAATAGA-AAACTAT------TGGAA-A--TAT-------A-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATCAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-TCCTTAA--ATCAAA---TTACACTTCACT-CAATA-T--ACTCAAAATAC-GTTACAGCT-A--CATTACAAAT-AATGTA-A-CAC--T----ATGAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTCCAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCATT-A-AAA--TGCTGCCTGGGTGCTTCT-TAT---ACC---TATTTATAAGT-AATATTTCATTAC-AGTAC---CA---TA-AAC-TATG----TT-------AA-CA-TACAC-TGAAATGAAATAACCTTTA-AA-GTG-GT-A-TTTa
gi|12 : TTG-CAGGGG---TGGTGGTT-GT---GTTTGTAG-TAAA-----A-----AGCGAC--C-AAACGCC-TGTC-TTAA---GGT---TTCA--AT-TATCA--TTATT-AATAT-------GGA-G----------------A-A--TAT-----GTAATGGCCCCTAAAAGA--CA-AAATAGAGAACAATAAATCA-TCACATG-AATTTACCAATAAA-------TACCTGAATGAAATATTA-A------------TG--TAC-ATAATTTCCATCTTTAA--AGTT-AT-CTCCCCTTAA--ATCAAA---TTCCAC-TTACTCCAATA-TCAACTGAAAATAA-GTTATAAAT-G--CATTACAAAT--ATGT--A-CAC--TATTGA-AAAAATATATT-A-AAG-AAGTA--ATAAAAAGGC-AATA-A------TTGTAAT--TACCG---CA-TCT-ATG-GGACAAGGGCCCAAATCTCCAAGCAATAA-AAAT-TGCTA
gi|13 : ttgTTG-CAGGGT---TGTTG----GT---ATTTATAGGTAGA-----G-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGA---TTCAT-AT-CATCAATTTATC-ATCAT-------A--------AT------GGGAA-C--TATGGAGAATG-TGACCC-TAAAAGA--CA-AATTAG-TACCAATAAAT-A-TCACAAT-GATTT--CAATCAA-------TA---T-----------A-A------------TG--TAC-ATAATTTCACCCTTTTAG-AGTT-AT-CT-ACTTTAA--ATCAAA---TTACACTT
gi|14 : AACAATCA-AAAG-T-CAATCAGTATTTTTTTATACCTAA-C---CAT--ACAA---AATGTTTCACTAA-AATAA-TATT---TT-CGC-TATGATACCTATCGATAAG-CA-TACAC-TGAAATGAGATAA--TTCATAA-ATAAGT-A-TTTACGCGT-CTT-CG-TAACAG--TT----AAGATTTCACTTT----TCTCTCAAACAGT
gi|15 : catttgtttg-TATAT-TGAGATGAGATAACTTATA-AA-ATT-GT-A-TTTAC---CATTCATCGTGATATAGTT----CAATTTTCAGTTG----TCTCTCAAACAG-TG-A-TATA-GGCT--ATACTAGTA-----TAT---ACA-TATTGT-GTT-ACTGAG-ATTA---ATAC----A--G-TCAGAT-CTGGACTC-AAATGTCTAC--AA-AATGTCT-TC-ga
gi|16 : TTT-TC-AAACTCAA-A-TATTCGAT--AT--GCAAAA-CT-GCTCAAC---GT--A-AAACC-ACT-ACC-----GAC---CTGACCAAAA-ACTCTC-AAGATTCT---GACTGAATA-AGACT-CA-GATAT-TC--CT-A--------------GACC-TTT-----------TAA-CACTC--GTGAAATAAA-AGGG-TGGATCTGG-GAATT---TGGCTTAA---ATAATA-gtc
gi|17 : taTTG-CAGGGG---TGGTG----GT---GTGTATGG-TAGA-----A-----A-TAAC--CCAA-CTCA-TGGC-T-AA---GGA---TTCAT-AT-CGTGAATTTATT-ATCATCATA---AGA-AA--TATGGAGAGTGGAA-A--AAT-----ACA---GCCC-TAAAAGA--CG-AAATGG-TAACAATAAAT-A-TCACAGC-GATTTA-CAAT-AA-------TG---T-----------A-A------------TG--T
gi|18 : gATAAA-GGGG-TGGATCTGG-GAATT---TGGCGTAATTTATAATA-AAATATATCTAT--TCTAATA-TG-CA-CAAATTGTGTTCATTAGAA----TATG-AC-ATTAA-ATA-TATATACAA--GTT-AAAA-CACACTGCT-ACA-T
gi|19 : CCTTTAAG-AGTT-AT-CT-CCCTT-A--ATTAAA-------ATTTTATG-TAGCA-C--TCT-AAGGTAT--TTACAGTT-G--CATTACAAGT-CGCGCA-A-CACTAT----G-AATACTATAaca
gi|2 : AAAA-CACACAGCT-ACA-TTCTTCCTCTTCTCTGAAAAATTACGTCCTCGT-CATTCTCTACAAAGA-ATGTACAA-ATATA----TAC--AAAATG-ATATATT-TACAAG-AAA-AA-TAAAATA-CCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|20 : agt----TACG-GC-ATCAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACatacttacaatgttcccttgtgtgaaatatgaactcaggtcttcttaacaatttctaggaaagtctttaaaatctcatttctttcaaaaccttggcaatgttcgtcttgcagaatgttgtgaagaaatttggctctctcagactaatgcaggtcagtggttctctgttgcatcctcacaaagtttccactccgtagcaattctggctctcttctagccctagcgtggagcagtaacaggtgaactcgtatcgtcggtctctgattcagcgtaagctgctggttcagtttcaggatcatatgcttgtggcacaggttccatgatcgcattctcctcttctgcatcatcttctagatgttatccaacatgatgagcgtcctcaactgatggaaaatctgcatcctcgattccggtttcaggcaacataatactagggacatcagagtgatgatgtcgtgttcctctgggaatctcaatgaagattgcttcctcctcatccgagtctattaggctttctacagttgaccgaatgtcactgtcttcccttatccttagtctcattctaggtttaggttttgaccgcattggtggaactggtttggaattcatttttggttgaaatttccttcaacatgtccaattggtaaaagtaggtttctgtacagaatcctcactcttccaacaccatcttccctctgtatattgtaaacttgaatgttttgatttggctgtttcatcacaatgtacgggtttcattcccatttttccgctaacttgtgacgtccatcgaaggctactactttaattagcactcggtatccctcttccagtacaacttctctggacttgagatcatagttgtctttttgtctttcctgtgctttacgtgtagcttctgatgctaactggtaggatttcctcaatcactcctttaggatttttatgtacttggtaagagatcttaatctttcgtttggtctatctaatccaaattctatgtct
gi|4 : AGGGG---TG-TG--TCGT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCCATGGCAT-AA---GGCGCTTTCATTATACGTCAATTTATTTAACAT-------AGCCA---TAT------TGGAACAGTTAT-----ATA-TGGTCT-AAAAGGA--CA-AAATA--TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------ACA------------TG--TACCATAATTTCAATCTTTAAGCAGTTTATTCT-CCCTTAA--ATCAAA---T-CCACTTTACT-CAATA-T--ACGGAAAATACCGTTATAAATCG--CATTACAAATTAATGTA-AACAC--T----G-AAAAATATAT--A-AGTTA--TA--GC-AAAAGGCCAAT-TACTACTCTTTTAAT--TACC----TAATCCGATGCGGAC---GGCCCAATTCTCCAAGCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAATGTGTATTTATAAGCAAATATTACATTACGGGTAC-TATA---TACAACATATAATACTTAT--ATAA--CACTATAC-TGAGATGAAAGAACTTTCA-AA-GTT-GG-ATTTTAC---TACTT-T--TAATAT--TT----AAACTTCCACTCT----TCTCTCAAACAGTTG-ACAATT-AGCT-AATG----TAGATATTATGACAGATTA-TAT-GTTGAGTAAACATTA---GTACTTTTGCTG-TTAGGT-CTGGA-TCGTAAGGTCTCC--AA-AGTCTTTATC-AAATTCAA-ACTATTTGAT--ATTCACAAAAACT-TCTCAAC---AT--ATAAATC-ACTCGCC-----AAC---CTGACCAAAAGACTTGA-GAGATTCCAAAAACTGAATAGAAACTTAAGGATCT-ACAGCCAAATTGGAAAT------ACCGTTTTCACTCACCTTGAACCACTTA-AGGAAATAAAGGGGG-TGGATCCGGCGAATT---TGGCTTAA---AT-ATATACATATACCTTAAATCTAATA-TG-CACCAAATTATGTTTAGTAGGAAGTGTATG-GCGATTAA-ATA-TATATACAAATGTTAAAAA-CACA-TGCT-ACAGTTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGATATGTACAA-GCATA----TACAAAAAATG-ATCTATTGTACATGTAAA-----AAAAT-TCCATC----
gi|5 : tAT-AAAAT---ATGTACAGAATT--ACTTA
gi|6 : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGG---TTCATTAT-CGTCAATTTATT-AACAT-------AGGCA---TAT------TGGAA-A--TAT-----ATA-TGGTCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAATCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATA-T-A-AGT-A--TA--GC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCG-ATG-GGACAA-GGCCCAATTCTCCAAGCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAATG--TATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTCTA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAG-TG-A-AATT-AGCTAAATG----TACATATTATGA-AGA-TA-TAT-GTT-AGTAAA-ATTA---GTAC--TTGCTG-TTAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTTATC-AAATTCAA-A-TATTTGAT--AT--TCAAAAACT-TCTCAAC---AT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCC---AACTGAATA-AAACT-AA-GATCT-ACAGCC-AAT--GAAAT------ACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCTG-GAATT---TGGCTTAA---ATAATA-TAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGA-ATGTACAA-GTATA----TAC--AAAATG-ATCTATT-TACATG-TAA-AA--AAAAT-TCCATC----TGT-----------------TGTACAGAATTC-ACTTAatacttacaaatggtcccttgtgtgaaaatttgaactcaggtcttcttcacaatttctaggagagtctttaaatctcatttctttcaaaaccctggcaatgctcgtcttgcaggatgtttgaaagaaatttggctctctcggaccaagcgggtcaatggttccctgttgcatcttcacaaagtttccactccgtaaccattcaggctctcgtctagtcctggttgatcggcgtggagcaataacaggtgaactcgtatcatctgtctctgattcagcgtcagctgctggttcagtttcagtgtcttctgcttgtggcgcaggtcctttattgcagtctcctcttctgcatcatcttctagatgttctccaacatgatgagcgtcctcaactgttggaaaatctgcatcctcgactccagtttcaggtaacacaatatagggacatcaggtgatgaatgtcgtgttcctccggaatgtcaatgaagactgcttcctcctcatccgagtctaatagggttttgcagttgactgagtgtcactgtcttccctttccttagtctctttctgggttttggtttggccgcattggtggaactggtttgggatccatttttggttggaattctgcaacatgtccaattggtaaaagtaagtttctgtgcagaatcctcactttccaataccatcttccctctgtattttgtaaacaggaatgtcttgatttggctggctcatacaatatacggatcctcttcccacttgtccgctaacttgtgacgttccatcaaaggctactactttgacaagcctcgatctccctcttccagtacaactcctctggacttgagattcatagttgtctttttgtcgctcctgtgctttacgtgtagcttctgatgctaatggtagattcctcaatcgctcctttaagttgtctatgtacttgtaagggatcttgatgtttcgttcggcctctctaatccaaattctatgtctattgg
gi|8 : TTG-CAGGGGATGTGATG--T-GT---ATTGGTA--TACATTTTTA-----A-TAAT--C-AA-CTCC-TGGC-T-AA---GGT---ATCATTAT-TATCAATTTATT-AACAT-------GGA----------------GAA------T-----ATA-TAGCCC-TAAAAGA--CA-AAATAT-TAACAATAAAT-A-TCACAGC-GATTTA-CAATGAA-------AA---G-----------A-A------------TG--TAC-AT---TTCAATATTTAAG-AGTT-AT-CT-CCCTTAA--AACGAA---TTCCACTTTACT-CAATA-T--ACTCAAAATAC-GTCATATCT-G--CATTACAAAT-AATGTA-A-CAC--T----ATAAAAATATGTTTA-AGT-A--TATAAC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCATTTCCCCAAGCATT-A-AAAA-TGCTACCTGGATGCTTCT-TACCTA--------TTTATAAG-AAATATTACATTAC-AGTAC-TATA---TA-CAC-TATAATACTTAT--ATAAG-CA-TATAT-CGAGGCGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATGT--TT----AAACTTTCACTCT----TCTCTCAAACAA-TG-A-AATT-AGC----------------------------------------TAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCC-T--AA-ATTCTTT-TTAAAATTCAA-A-TATTCTAT--AT--TC---GATTGACTCAAA---GT--A-AAAGC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGC-AAGATTCT---AACTGAATA-AAACT-CA-GATCT-ACAGCC-ATT--GAAATATCTAAACCTTTTTCACTCACCCATAA-CACTT--ATGAAATAAA-GGGG-TGGATCTGG-GAATT---TGGC-TAA---ATAATA-AAATACACCTTTAATCTAATA--A-CA-C-AATTATGTTTATTA-AA----TA
gi|9 : tTTGTCAGGGG---TGGTG--T-GTGCTGTT----G-TAGA-----ACATTCA-CACCTCC-CA-CTCC-TGTC-T-CACACGGA---GTCATTAT-CGT----TT-TT-AATAG-------AGA---------------GAAG-A--TCT-----TTAATGGCCC-TAAAAGGACCACAAATAA-TAACAATACAT-AATGACAGTTGATG-A-CAATAGAACGTTCATG---G-----------A-AAACTACTATAATTGGTTAC-ATTATTTCCACCTTTTAT-AGT--AT-C--CCCTTAACAAGCAAAATTCTCCACTTTACT-CAATAAT--ACTGAAAATAAAGTTATAAAT-GTCCATTACAAATTAATGTATA-CAC--TTAT-G-AGAAATATATA-AGAGA-A--TA--AT-AAAAGGC-AATAT-------TATTGATAATACCCGAGTA--CT-AAG-GGACAA-GGCCAAACTCCCAATGCAAT-ACAAACATGCTACTGGAATCTATCT-TA-TTATAC---T-CTAATAAGCCAATA-TAC-TTAC-AGTACTTATACAGTA-AAC---TAATACGT-----TAAGCCG-TATACTTGAGCTGAAAGAACTTTCG-AACGTG-GTCA-TTTAC---TACTT-T--T-ATAT--TTAAGAAAGCTTTCCCCCTCGTGTCTCTCAAACAGTTGAA-AATTAAGCT-AAg
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|3 ): ACTATACAAAGGTCCTTGTTGATATACATATCGTCTTCTTCACAACTTTCTAGGAGAGTCTTTAAAATCTCATTTCTTTCAAAACCCTGCAATGCTCGTCTTGCAGAATGTTTGTAAGAAATTTGGCTCTCTCGGACGCAATGCGGTCAGTGGTTCCCTGTTGCATCTTACAAAGTTCCACTCCGTAACCATTCAGGCTTCTCTTCTAGTCCTGGTTGATCGGCGTGGAGCATAACAGAGTGAACTCGTATCATCTGTCTCTGATTTCAGCGTCAGCTTGGTTTCAGTTTCCAGGCATCGTCTGTTGGCCCACGATTCCTTGTGAGGCTCTATCCATATCAGCAAGTCCTCCTCTTCTGCATCATGCTTCTAATGTTCGGTACACCATATGCTTCATGCGAGCCTTGCCCTCAAGTTTGGGAAAATCGACCCTCGTTGCAGTTCAATTCATCTTAATTTGATTATCAAGGCAACTACAAAAACTAAGGGGAACTATTTCATGGTTTCTTACCTGTTTGACGTTGAACAAAGACTGCGTCATGTGATTTGCGTGGATATCTAGTATTTTCGTGAAGACTGCTTCTCTTCATCCGAGATCTATAGTGGTACCATATATACTTTGGATACGTGATTACAGGTGTCACTGTCTTCCCCTCTCTCTCATATAGTCTCCTCTTCTGTAGTATATAATTAGATTTGTCTGCCGCATTTCTCGATAGGAATGGGTGGGATCATGTTTTGCGTATTTGAATACTGCAACATAGTCCATTCCATAATTCCCGTGTAAAAGTTAAGTTTCTTGGTGTCAGACATCCTCACTCTCCAACATCCATCTACCCTCTGTACTGCTTGAAACAGGATATCTTTGATGGCCTGGTTCGAAATCAACGAAGGTAACGTCGCACAGAGGATCCTCTCCCTACTTGTCCGCTAACTTTGTGACACTGACTCCATCAAGGGTCATTCCTACTTATCTTCACAATACTAGCACCTATCTCCCCTTCCGAGAGACAATCCTCCTGTCTGACAATACGGTTCGTCTTTTTTGTCGCTTCCTTAGTGCGTTTACGATGTAGGGACTACTAGGAATTGCTAACTGGAGAT
Unaligned ( gi|7 ): ATGAAGTCAGGTCTTCTTCACAATTTCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCTAGCCCTGGTTGATCTGCGTGGAGCAGTAACAGGTGAACTCGTATCGTCGGTCTCTGATTCAGCGTTAGCTGCTGGTTCAGTTTCAGGATCATCTGCTTGTGGCGCAGGTTCCATGATCACAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCATCGATTCCAGTTTCAGGCAACACAATACTAGGGGACATCAGGGTGATGATGTCGTGTTCCTCTAGGAATCTCAATGAAGACTGCTTCCTCTTCATCCGAGTCTAATAGGGTTTCTGCATTTGACTGAGTGTCACTGTCTCCCCCCTTTCCTTAGTCTCTTTCTGGGTTTAGATTTTGGCCGCATTGGTGGAATTGGTTTGGGATCCATCTTTGGTTTGAATTCTGCAACATGTCCAATCGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTCTTCCAACACCATCTTCCCTCTGTACTTTGTAAACAGGAATATCTTGATTTGGCTGTTTAATCACAATATACGGATCCTCTTCCCCCTTGTCCGCTAACTTGTGACGTCCACCAAAGGCTACTACTTTAACTAGCACTCTATCTCCCTCTTCCAGTACAACTTCTCTGGACTTGCTGAAGATCATAGTTGATCTTTTGATCGCTTCCTGTGCTTATACGGTGTAGCTTCTGAATGCAACTGGATAGGATTTCTGAATCGCTCCTTTAGATTAGTCTATTACTACTGGTAAG
Alignments
lowQualScore : 333333333 11111111111 1 7777777777777777777777777 1111 111111 1 444444444444444444444444444444444444444 1 11 333333 11 111111 2222 1 11 22222222 22 111 1111 111 1111 1111 1111 1 22222222 111 111 11 2222 1 11 111 111 11 22222 111 111 11 111111 333333 11 111 111 1111 1111 1 1 2 11 2 3333 11 2 22222 11 1111 2222222222222222 11
lowQualScore : 5 888 1 000000000 0 5 77777777777 5 66 5 5 5 5 5 888 9999 2 5 0 5 2222222222222222222222222 2222 444444 0 5 66 5 66 5 5 5 5 5 666666666666666666666666666666666666666 66 5 1 5 5 5 5 66 888 0 5 5 77 4 1 1 5 77 22 5 5 77 000000 00 6 6 99 99 6 6 999999 99 0000 6 6 6 6 1 5 22 0 6 22 99999999 00 77 6 111 6 6 5555 77 5 5 0 5 5 5 5 5 111 6666 1 99 4444 4444 5 8 8 8 8 00000000 3 99 8 8 8 8 8 0 8 444 111 8 8 8 44 0000 8 3 6 8 8 1 11 222 11 0 99 444 11 8 8 8 00000 444 8 88 444 8 8 11 8 0 666666 333333 5 0 5 99 8 99 6 6 0 6 111 7 111 6 0 0000 8 0 4444 8 8 8 8 99 1 1 6 0 0 88 0 6666 11 0 22 8 8 77777 11 7777 8888888888888888 22
lowQualScore : . ... . ......... . . ........... . .. . . . . . ... .... . . . . ......................... .... ...... . . .. . .. . . . . . ....................................... .. . . . . . . .. ... . . . .. . . . . .. .. . . .. ...... .. . . .. .. . . ...... .. .... . . . . . . .. . . .. ........ .. .. . ... . . .... .. . . . . . . . . ... .... . .. .... .... . . . . . ........ . .. . . . . . . . ... ... . . . .. .... . . . . . . .. ... .. . .. ... .. . . . ..... ... . .. ... . . .. . . ...... ...... . . . .. . .. . . . . ... . ... . . .... . . .... . . . . .. . . . . . .. . .... .. . .. . . ..... .. .... ................ ..
lowQualScore : 7 888 4 888888888 1 0 99999999999 0 99 0 0 0 0 0 888 8888 4 0 1 0 1111111111111111111111111 0000 888888 0 0 99 0 44 0 0 0 0 0 666666666666666666666666666666666666666 99 7 7 0 0 0 0 99 888 1 7 7 99 3 4 6 7 99 99 7 7 99 444444 22 7 7 22 22 7 7 222222 22 8888 7 7 7 7 4 7 33 3 7 00 22222222 77 33 7 777 7 7 5555 77 7 7 7 7 7 7 7 7 777 0000 7 22 2222 2222 5 0 0 0 0 88888888 0 00 0 0 0 0 0 8 0 000 888 0 0 0 00 2222 0 3 7 0 0 4 00 000 44 8 00 000 00 0 0 0 00000 000 0 66 000 0 0 00 0 8 666666 222222 0 8 6 66 0 00 7 7 7 7 777 2 777 7 8 0000 0 8 2222 0 0 0 0 22 4 4 7 6 0 66 4 2222 00 4 88 0 0 66666 44 0000 2222222222222222 55
consensus : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAA-NTGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
Reference ( family-739 ) : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAA-NTGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|1 : AA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATCTATTTTTTATCCATGAAAATAAAAAGTCGAGAATTCGACTTA
gi|10 : TATGA-AGA-TA-TATAGCT-AAGTAAA-ATTATAGGTAC--TTACTGGTCAGGTTCTGGA-TA--AAGGTCT-CGGAACAGTCTTT-TC-AAATTCAATA-TATTAGACTCAT--AAACAAACT-GCTCAAAAAGGTCAA-AAATTTACT-TTCCTCACAACGGCCTGAC--AAA-ACTTGAAGAGGTTCT---AACTGAATA-AAACTCCA--GATTTTACAGAC-CAT--GAAAT-----GACCGTTTTC-CTCACC-ATGA-CATTTGTAGGAAATAAA-GGGGGTGGATCTGG---ATTAGTTGGCGTAA---ATAATA-AACAATACCTTTAATCTAATAATGATA-CAAATTATGTTATTTAGAA----TATGTGC-ATTTATATAATACACACAA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATC----Tatacttgacaaaggtcccttgttctgaaatacacactcggatcgtcacatttctagggagctccttaaaatccattcatttctttcaaaaccctggcatctctgtccttgcagaatgttttagaagaacatgattggcctttcttcatcggaccacagttgcggtcatggttccctattcatcttacacaaagttttcacccgtaaacattcaggctctcgttctagtcgctggttaataaggcgtgtatgcatacaggtgaactcgtatcagtctgtctctgactgtcagcgtgcgctgctggctttagtttcagtgtctggaatcttctgcttgtggcgacaggttctttgcatctggcgagaatctcctactcatagcagtcatttcctaagagtgtttctctccaagcatgagcagcgtcctcaacttgttgaccatgtgcatcgctcgtattcagttgccaggaaacacaattactgggtgaatgatgtcgtgttcctactggaatctcaatgaagactgtgcttccttcctcattccgagtctaatagggtttacttgcaagttgactgagtgtcaagagcgctgtcttcaccctttcagtctctttctgggtttttggtttgtgccaggacgattaggtggaactggtttgcggaagtactaacttttttggttggaattgctgcaacctgtcaattggtgaaagtagagtttctggcagaatccctcactgctatcgcaacagccaatcttccatctgtatttgtaaacaaagaaagtgtctgtgatttgggctggctcacactatatacgacttcttcccatcttccgctaacttgtgacgatccatgcaagcaggctactaatcggtgttagtctaagacactcgatctgccctcttccagtaacagacttcctctggacttgagatcatagtctgtctttttttgtcgctccgcctgctttacgtgtaagctcctgagtgctaactggatagggaatttcttcaaatcgctactttaagggttgtctatgtgatcttatggtaagggaaatacttgatgttcgttcgttcggtctaaaatcaaattctgattctatggc
gi|11 : aTTG-CAGGGG---TGGTG----GT---GTTTATGG-TTGA-----A-----A-TAAC--C-AA-TTCC-TGGC-T-AA---GGG---TTCAT-AT-CGTCAATTTATT-AATATGTAGAATAGA-AAACTAT------TGGAA-A--TAT-------A-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATCAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-TCCTTAA--ATCAAA---TTACACTTCACT-CAATA-T--ACTCAAAATAC-GTTACAGCT-A--CATTACAAAT-AATGTA-A-CAC--T----ATGAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTCCAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCATT-A-AAA--TGCTGCCTGGGTGCTTCT-TAT---ACC---TATTTATAAGT-AATATTTCATTAC-AGTAC---CA---TA-AAC-TATG----TT-------AA-CA-TACAC-TGAAATGAAATAACCTTTA-AA-GTG-GT-A-TTTa
gi|12 : TTG-CAGGGG---TGGTGGTT-GT---GTTTGTAG-TAAA-----A-----AGCGAC--C-AAACGCC-TGTC-TTAA---GGT---TTCA--AT-TATCA--TTATT-AATAT-------GGA-G----------------A-A--TAT-----GTAATGGCCCCTAAAAGA--CA-AAATAGAGAACAATAAATCA-TCACATG-AATTTACCAATAAA-------TACCTGAATGAAATATTA-A------------TG--TAC-ATAATTTCCATCTTTAA--AGTT-AT-CTCCCCTTAA--ATCAAA---TTCCAC-TTACTCCAATA-TCAACTGAAAATAA-GTTATAAAT-G--CATTACAAAT--ATGT--A-CAC--TATTGA-AAAAATATATT-A-AAG-AAGTA--ATAAAAAGGC-AATA-A------TTGTAAT--TACCG---CA-TCT-ATG-GGACAAGGGCCCAAATCTCCAAGCAATAA-AAA-TTGCTA
gi|13 : ttgTTG-CAGGGT---TGTTG----GT---ATTTATAGGTAGA-----G-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGA---TTCAT-AT-CATCAATTTATC-ATCAT-------A--------AT------GGGAA-C--TATGGAGAATG-TGACCC-TAAAAGA--CA-AATTAG-TACCAATAAAT-A-TCACAAT-GATTT--CAATCAA-------TA---T-----------A-A------------TG--TAC-ATAATTTCACCCTTTTAG-AGTT-AT-CT-ACTTTAA--ATCAAA---TTACACTT
gi|14 : AACAATCA-AAA-GT-CAATCAGTATTTTTTTATACCTAA-C---CAT--ACAA---AATGTTTCACTAA-AATAA-TATT---TT-CGC-TATGATACCTATCGATAAG-CA-TACAC-TGAAATGAGATAA--TTCATAA-ATAAGT-A-TTTACGCGT-CTT-CG-TAACAG--TT----AAGATTTCACTTT----TCTCTCAAACAGT
gi|15 : catttgtttg-TATAT-TGAGATGAGATAACTTATA-AA-ATT-GT-A-TTTAC---CATTCATCGTGATATAGTT----CAATTTTCAGTTG----TCTCTCAAACAG-TG-A-TATA-GGCT-A---TA-CTAGTATAT-ACA-TATTGT-GTT-A-CTGAG-ATTA---ATAC----A--G-TCAGAT-CTGGACTC-AAATGTCTAC--AA-AATGTCT-TC-ga
gi|16 : TTT-TC-AAACTCAA-A-TATTCGAT--AT--GCAAAA-CT-GCTCAAC---GT--A-AAACC-ACT-ACC-----GAC---CTGACCAAAA-ACTCTC-AAGATTCT---GACTGAATA-AGACTC-A--GATAT-TC--CT-A--------------GACC-TTT-----------TAA-CACTC--GTGAAATAAA-AGGG-TGGATCTGG-GAATT---TGGCTTAA---ATAATA-gtc
gi|17 : taTTG-CAGGGG---TGGTG----GT---GTGTATGG-TAGA-----A-----A-TAAC--CCAA-CTCA-TGGC-T-AA---GGA---TTCAT-AT-CGTGAATTTATT-ATCATCATA---AGA-AA--TATGGAGAGTGGAA-A--AAT-----ACA---GCCC-TAAAAGA--CG-AAATGG-TAACAATAAAT-A-TCACAGC-GATTTA-CAAT-AA-------TG---T-----------A-A------------TG--T
gi|18 : gATAAA-GGGG-TGGATCTGG-GAATT---TGGCGTAATTTATAATA-AAATATATCTAT--TCTAATA-TG-CA-CAAATTGTGTTCATTAGAA----TATG-AC-ATTAA-ATA-TATATACAA--GTT-AAAA-CACACTGCT-ACA-T
gi|19 : CCTTTAAG-AGTT-AT-CT-CCCTT-A--ATTAAA-------ATTTTATG-TAGCA-C--TCT-AAGGTAT--TTACAGTT-G--CATTACAAGT-CGCGCA-A-CACTAT----G-AATACTATAaca
gi|2 : AAAA-CACACAGCT-ACA-TTCTTCCTCTTCTCTGAAAAATTACGTCCTCGT-CATTCTCTACAAAGA-ATGTACAA-ATATA----TAC--AAAATG-ATATATT-TACAAG-AAA-AA-TAAAATA-CCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|20 : agt----TACG-GC-ATCAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACatacttacaatgttcccttgtgtgaaatatgaactcaggtcttcttaacaatttctaggaaagtctttaaaatctcatttctttcaaaaccttggcaatgttcgtcttgcagaatgttgtgaagaaatttggctctctcagactaatgcaggtcagtggttctctgttgcatcctcacaaagtttccactccgtagcaattctggctctcttctagccctagcgtggagcagtaacaggtgaactcgtatcgtcggtctctgattcagcgtaagctgctggttcagtttcaggatcatatgcttgtggcacaggttccatgatcgcattctcctcttctgcatcatcttctagatgttatccaacatgatgagcgtcctcaactgatggaaaatctgcatcctcgattccggtttcaggcaacataatactagggacatcagagtgatgatgtcgtgttcctctgggaatctcaatgaagattgcttcctcctcatccgagtctattaggctttctacagttgaccgaatgtcactgtcttcccttatccttagtctcattctaggtttaggttttgaccgcattggtggaactggtttggaattcatttttggttgaaatttccttcaacatgtccaattggtaaaagtaggtttctgtacagaatcctcactcttccaacaccatcttccctctgtatattgtaaacttgaatgttttgatttggctgtttcatcacaatgtacgggtttcattcccatttttccgctaacttgtgacgtccatcgaaggctactactttaattagcactcggtatccctcttccagtacaacttctctggacttgagatcatagttgtctttttgtctttcctgtgctttacgtgtagcttctgatgctaactggtaggatttcctcaatcactcctttaggatttttatgtacttggtaagagatcttaatctttcgtttggtctatctaatccaaattctatgtct
gi|4 : AGGGG---TG-TG--TCGT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCCATGGCAT-AA---GGCGCTTTCATTATACGTCAATTTATTTAACAT-------AGCCA---TAT------TGGAACAGTTAT-----ATA-TGGTCT-AAAAGGA--CA-AAATA--TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------ACA------------TG--TACCATAATTTCAATCTTTAAGCAGTTTATTCT-CCCTTAA--ATCAAA---T-CCACTTTACT-CAATA-T--ACGGAAAATACCGTTATAAATCG--CATTACAAATTAATGTA-AACAC--T----G-AAAAATATAT--A-AGTTA--TA--GC-AAAAGGCCAAT-TACTACTCTTTTAAT--TACC----TAATCCGATGCGGAC---GGCCCAATTCTCCAAGCAAT-A-AAA-TTGTTACCTGAATGTTTCT-TACCTAAATGTGTATTTATAAGCAAATATTACATTACGGGTAC-TATA---TACAACATATAATACTTAT--ATAA--CACTATAC-TGAGATGAAAGAACTTTCA-AA-GTT-GG-ATTTTAC---TACTT-T--TAATAT--TT----AAACTTCCACTCT----TCTCTCAAACAGTTG-ACAATT-AGCT-AATGTAGATATTATGACAGATTA-TAT-GTTGA-GTAAACATTA---GTACTTTTGCTG-TTAGGT-CTGGA-TCGTAAGGTCTCC--AA-AGTCTTTATC-AAATTCAA-ACTATTTGAT--ATTCACAAAAACT-TCTCAAC---AT--ATAAATC-ACTCGCC-----AAC---CTGACCAAAAGACTTGA-GAGATTCCAAAAACTGAATAGAAACTT-AAGGATCT-ACAGCCAAATTGGAAAT------ACCGTTTTCACTCACCTTGAACCACTTA-AGGAAATAAAGGGGG-TGGATCCGGCGAATT---TGGCTTAA---AT-ATATACATATACCTTAAATCTAATA-TG-CACCAAATTATGTTTAGTAGGAAGTGTATG-GCGATTAA-ATA-TATATACAAATGTTAAAAA-CACA-TGCT-ACAGTTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGATATGTACAA-GCATA----TACAAAAAATG-ATCTATTGTACATGTAAA-----AAAAT-TCCATC----
gi|5 : tAT-AAAAT---ATGTACAGAATT--ACTTA
gi|6 : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGG---TTCATTAT-CGTCAATTTATT-AACAT-------AGGCA---TAT------TGGAA-A--TAT-----ATA-TGGTCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAATCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATA-T-A-AGT-A--TA--GC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCG-ATG-GGACAA-GGCCCAATTCTCCAAGCAAT-A-AAA-TTGTTACCTGAATGTTTCT-TACCTAAATG--TATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTCTA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAG-TG-A-AATT-AGCTAAATGTACATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTGCTG-TTAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTTATC-AAATTCAA-A-TATTTGAT--AT--TCAAAAACT-TCTCAAC---AT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCC---AACTGAATA-AAACTA-A--GATCT-ACAGCC-AAT--GAAAT------ACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCTG-GAATT---TGGCTTAA---ATAATA-TAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGA-ATGTACAA-GTATA----TAC--AAAATG-ATCTATT-TACATG-TAA-AA--AAAAT-TCCATC----TGT-----------------TGTACAGAATTC-ACTTAatacttacaaatggtcccttgtgtgaaaatttgaactcaggtcttcttcacaatttctaggagagtctttaaatctcatttctttcaaaaccctggcaatgctcgtcttgcaggatgtttgaaagaaatttggctctctcggaccaagcgggtcaatggttccctgttgcatcttcacaaagtttccactccgtaaccattcaggctctcgtctagtcctggttgatcggcgtggagcaataacaggtgaactcgtatcatctgtctctgattcagcgtcagctgctggttcagtttcagtgtcttctgcttgtggcgcaggtcctttattgcagtctcctcttctgcatcatcttctagatgttctccaacatgatgagcgtcctcaactgttggaaaatctgcatcctcgactccagtttcaggtaacacaatatagggacatcaggtgatgaatgtcgtgttcctccggaatgtcaatgaagactgcttcctcctcatccgagtctaatagggttttgcagttgactgagtgtcactgtcttccctttccttagtctctttctgggttttggtttggccgcattggtggaactggtttgggatccatttttggttggaattctgcaacatgtccaattggtaaaagtaagtttctgtgcagaatcctcactttccaataccatcttccctctgtattttgtaaacaggaatgtcttgatttggctggctcatacaatatacggatcctcttcccacttgtccgctaacttgtgacgttccatcaaaggctactactttgacaagcctcgatctccctcttccagtacaactcctctggacttgagattcatagttgtctttttgtcgctcctgtgctttacgtgtagcttctgatgctaatggtagattcctcaatcgctcctttaagttgtctatgtacttgtaagggatcttgatgtttcgttcggcctctctaatccaaattctatgtctattgg
gi|8 : TTG-CAGGGGATGTGATG--T-GT---ATTGGTA--TACATTTTTA-----A-TAAT--C-AA-CTCC-TGGC-T-AA---GGT---ATCATTAT-TATCAATTTATT-AACAT-------GGA----------------GAA------T-----ATA-TAGCCC-TAAAAGA--CA-AAATAT-TAACAATAAAT-A-TCACAGC-GATTTA-CAATGAA-------AA---G-----------A-A------------TG--TAC-AT---TTCAATATTTAAG-AGTT-AT-CT-CCCTTAA--AACGAA---TTCCACTTTACT-CAATA-T--ACTCAAAATAC-GTCATATCT-G--CATTACAAAT-AATGTA-A-CAC--T----ATAAAAATATGTTTA-AGT-A--TATAAC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCATTTCCCCAAGCATT-A-AAA-ATGCTACCTGGATGCTTCT-TACCTA--------TTTATAAG-AAATATTACATTAC-AGTAC-TATA---TA-CAC-TATAATACTTAT--ATAAG-CA-TATAT-CGAGGCGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATGT--TT----AAACTTTCACTCT----TCTCTCAAACAA-TG-A-AATT-AGCT-AA---A-A---------------------TT-A-G-------------TAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCC-T--AA-ATTCTTT-TTAAAATTCAA-A-TATTCTAT--AT--TC---GATTGACTCAAA---GT--A-AAAGC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGC-AAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-ATT--GAAATATCTAAACCTTTTTCACTCACCCATAA-CACTT--ATGAAATAAA-GGGG-TGGATCTGG-GAATT---TGGC-TAA---ATAATA-AAATACACCTTTAATCTAATA--A-CA-C-AATTATGTTTATTA-AA----TA
gi|9 : tTTGTCAGGGG---TGGTG--T-GTGCTGTT----G-TAGA-----ACATTCA-CACCTCC-CA-CTCC-TGTC-T-CACACGGA---GTCATTAT-CGT----TT-TT-AATAG-------AGA---------------GAAG-A--TCT-----TTAATGGCCC-TAAAAGGACCACAAATAA-TAACAATACAT-AATGACAGTTGATG-A-CAATAGAACGTTCATG---G-----------A-AAACTACTATAATTGGTTAC-ATTATTTCCACCTTTTAT-AGT--AT-C--CCCTTAACAAGCAAAATTCTCCACTTTACT-CAATAAT--ACTGAAAATAAAGTTATAAAT-GTCCATTACAAATTAATGTATA-CAC--TTAT-G-AGAAATATATA-AGAGA-A--TA--AT-AAAAGGC-AATAT-------TATTGATAATACCCGAGTA--CT-AAG-GGACAA-GGCCAAACTCCCAATGCAAT-ACAAACATGCTACTGGAATCTATCT-TA-TTATAC---T-CTAATAAGCCAATA-TAC-TTAC-AGTACTTATACAGTA-AAC---TAATACGT-----TAAGCCG-TATACTTGAGCTGAAAGAACTTTCG-AACGTG-GTCA-TTTAC---TACTT-T--T-ATAT--TTAAGAAAGCTTTCCCCCTCGTGTCTCTCAAACAGTTGAA-AATTAAGCT-AAg
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|3 ): ACTATACAAAGGTCCTTGTTGATATACATATCGTCTTCTTCACAACTTTCTAGGAGAGTCTTTAAAATCTCATTTCTTTCAAAACCCTGCAATGCTCGTCTTGCAGAATGTTTGTAAGAAATTTGGCTCTCTCGGACGCAATGCGGTCAGTGGTTCCCTGTTGCATCTTACAAAGTTCCACTCCGTAACCATTCAGGCTTCTCTTCTAGTCCTGGTTGATCGGCGTGGAGCATAACAGAGTGAACTCGTATCATCTGTCTCTGATTTCAGCGTCAGCTTGGTTTCAGTTTCCAGGCATCGTCTGTTGGCCCACGATTCCTTGTGAGGCTCTATCCATATCAGCAAGTCCTCCTCTTCTGCATCATGCTTCTAATGTTCGGTACACCATATGCTTCATGCGAGCCTTGCCCTCAAGTTTGGGAAAATCGACCCTCGTTGCAGTTCAATTCATCTTAATTTGATTATCAAGGCAACTACAAAAACTAAGGGGAACTATTTCATGGTTTCTTACCTGTTTGACGTTGAACAAAGACTGCGTCATGTGATTTGCGTGGATATCTAGTATTTTCGTGAAGACTGCTTCTCTTCATCCGAGATCTATAGTGGTACCATATATACTTTGGATACGTGATTACAGGTGTCACTGTCTTCCCCTCTCTCTCATATAGTCTCCTCTTCTGTAGTATATAATTAGATTTGTCTGCCGCATTTCTCGATAGGAATGGGTGGGATCATGTTTTGCGTATTTGAATACTGCAACATAGTCCATTCCATAATTCCCGTGTAAAAGTTAAGTTTCTTGGTGTCAGACATCCTCACTCTCCAACATCCATCTACCCTCTGTACTGCTTGAAACAGGATATCTTTGATGGCCTGGTTCGAAATCAACGAAGGTAACGTCGCACAGAGGATCCTCTCCCTACTTGTCCGCTAACTTTGTGACACTGACTCCATCAAGGGTCATTCCTACTTATCTTCACAATACTAGCACCTATCTCCCCTTCCGAGAGACAATCCTCCTGTCTGACAATACGGTTCGTCTTTTTTGTCGCTTCCTTAGTGCGTTTACGATGTAGGGACTACTAGGAATTGCTAACTGGAGAT
Unaligned ( gi|7 ): ATGAAGTCAGGTCTTCTTCACAATTTCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCTAGCCCTGGTTGATCTGCGTGGAGCAGTAACAGGTGAACTCGTATCGTCGGTCTCTGATTCAGCGTTAGCTGCTGGTTCAGTTTCAGGATCATCTGCTTGTGGCGCAGGTTCCATGATCACAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCATCGATTCCAGTTTCAGGCAACACAATACTAGGGGACATCAGGGTGATGATGTCGTGTTCCTCTAGGAATCTCAATGAAGACTGCTTCCTCTTCATCCGAGTCTAATAGGGTTTCTGCATTTGACTGAGTGTCACTGTCTCCCCCCTTTCCTTAGTCTCTTTCTGGGTTTAGATTTTGGCCGCATTGGTGGAATTGGTTTGGGATCCATCTTTGGTTTGAATTCTGCAACATGTCCAATCGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTCTTCCAACACCATCTTCCCTCTGTACTTTGTAAACAGGAATATCTTGATTTGGCTGTTTAATCACAATATACGGATCCTCTTCCCCCTTGTCCGCTAACTTGTGACGTCCACCAAAGGCTACTACTTTAACTAGCACTCTATCTCCCTCTTCCAGTACAACTTCTCTGGACTTGCTGAAGATCATAGTTGATCTTTTGATCGCTTCCTGTGCTTATACGGTGTAGCTTCTGAATGCAACTGGATAGGATTTCTGAATCGCTCCTTTAGATTAGTCTATTACTACTGGTAAG
Alignments
lowQualScore : 333333333 11111111111 1 7777777777777777777777777 1111 111111 1 444444444444444444444444444444444444444 1 11 333333 11 111111 2222 1 11 22222222 22 111 1111 111 1111 1111 1111 1 22222222 111 111 11 2222 1 11 111 111 11 22222 111 111 11 111111 333333 11 111 111 1111 1111 1 1 2 11 2 3333 11 2 22222 11 1111 2222222222222222 11
lowQualScore : 5 888 1 000000000 0 5 77777777777 5 66 5 5 5 5 5 888 9999 2 5 0 5 2222222222222222222222222 2222 444444 0 5 66 5 66 5 5 5 5 5 666666666666666666666666666666666666666 66 5 1 5 5 5 5 66 888 0 5 5 77 4 1 1 5 77 22 5 5 77 000000 00 6 6 99 99 6 6 999999 99 0000 6 6 6 6 1 5 22 0 6 22 99999999 00 77 6 111 6 6 5555 77 5 5 0 5 5 5 5 5 111 6666 1 99 4444 4444 5 8 8 8 8 00000000 3 99 8 8 8 8 8 0 8 444 111 8 8 8 44 0000 8 3 6 8 8 1 11 222 11 0 99 444 11 8 8 8 00000 444 8 88 444 8 8 11 8 0 666666 333333 5 0 5 99 8 99 6 6 0 6 111 7 111 6 0 0000 8 0 4444 8 8 8 8 99 1 1 6 0 0 88 0 6666 11 0 22 8 8 77777 11 7777 8888888888888888 22
lowQualScore : . ... . ......... . . ........... . .. . . . . . ... .... . . . . ......................... .... ...... . . .. . .. . . . . . ....................................... .. . . . . . . .. ... . . . .. . . . . .. .. . . .. ...... .. . . .. .. . . ...... .. .... . . . . . . .. . . .. ........ .. .. . ... . . .... .. . . . . . . . . ... .... . .. .... .... . . . . . ........ . .. . . . . . . . ... ... . . . .. .... . . . . . . .. ... .. . .. ... .. . . . ..... ... . .. ... . . .. . . ...... ...... . . . .. . .. . . . . ... . ... . . .... . . .... . . . . .. . . . . . .. . .... .. . .. . . ..... .. .... ................ ..
lowQualScore : 7 888 4 888888888 1 0 99999999999 0 99 0 0 0 0 0 888 8888 4 0 1 0 1111111111111111111111111 0000 888888 0 0 99 0 44 0 0 0 0 0 666666666666666666666666666666666666666 99 7 7 0 0 0 0 99 888 1 7 7 99 3 4 6 7 99 99 7 7 99 444444 22 7 7 22 22 7 7 222222 22 8888 7 7 7 7 4 7 33 3 7 00 22222222 77 33 7 777 7 7 5555 77 7 7 7 7 7 7 7 7 777 0000 7 22 2222 2222 5 0 0 0 0 88888888 0 00 0 0 0 0 0 8 0 000 888 0 0 0 00 2222 0 3 7 0 0 4 00 000 44 8 00 000 00 0 0 0 00000 000 0 66 000 0 0 00 0 8 666666 222222 0 8 6 66 0 00 7 7 7 7 777 2 777 7 8 0000 0 8 2222 0 0 0 0 22 4 4 7 6 0 66 4 2222 00 4 88 0 0 66666 44 0000 2222222222222222 55
consensus : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAA-NTGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
Reference ( family-739 ) : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAA-NTGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|1 : AA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATCTATTTTTTATCCATGAAAATAAAAAGTCGAGAATTCGACTTA
gi|10 : TATGA-AGA-TA-TATAGCT-AAGTAAA-ATTATAGGTAC--TTACTGGTCAGGTTCTGGA-TA--AAGGTCT-CGGAACAGTCTTT-TC-AAATTCAATA-TATTAGACTCAT--AAACAAACT-GCTCAAAAAGGTCAA-AAATTTACT-TTCCTCACAACGGCCTGAC--AAA-ACTTGAAGAGGTTCT---AACTGAATA-AAACTCCA--GATTTTACAGAC-CAT--GAAAT-----GACCGTTTTC-CTCACC-ATGA-CATTTGTAGGAAATAAA-GGGGGTGGATCTGG---ATTAGTTGGCGTAA---ATAATA-AACAATACCTTTAATCTAATAATGATA-CAAATTATGTTATTTAGAA----TATGTGC-ATTTATATAATACACACAA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATC----Tatacttgacaaaggtcccttgttctgaaatacacactcggatcgtcacatttctagggagctccttaaaatccattcatttctttcaaaaccctggcatctctgtccttgcagaatgttttagaagaacatgattggcctttcttcatcggaccacagttgcggtcatggttccctattcatcttacacaaagttttcacccgtaaacattcaggctctcgttctagtcgctggttaataaggcgtgtatgcatacaggtgaactcgtatcagtctgtctctgactgtcagcgtgcgctgctggctttagtttcagtgtctggaatcttctgcttgtggcgacaggttctttgcatctggcgagaatctcctactcatagcagtcatttcctaagagtgtttctctccaagcatgagcagcgtcctcaacttgttgaccatgtgcatcgctcgtattcagttgccaggaaacacaattactgggtgaatgatgtcgtgttcctactggaatctcaatgaagactgtgcttccttcctcattccgagtctaatagggtttacttgcaagttgactgagtgtcaagagcgctgtcttcaccctttcagtctctttctgggtttttggtttgtgccaggacgattaggtggaactggtttgcggaagtactaacttttttggttggaattgctgcaacctgtcaattggtgaaagtagagtttctggcagaatccctcactgctatcgcaacagccaatcttccatctgtatttgtaaacaaagaaagtgtctgtgatttgggctggctcacactatatacgacttcttcccatcttccgctaacttgtgacgatccatgcaagcaggctactaatcggtgttagtctaagacactcgatctgccctcttccagtaacagacttcctctggacttgagatcatagtctgtctttttttgtcgctccgcctgctttacgtgtaagctcctgagtgctaactggatagggaatttcttcaaatcgctactttaagggttgtctatgtgatcttatggtaagggaaatacttgatgttcgttcgttcggtctaaaatcaaattctgattctatggc
gi|11 : aTTG-CAGGGG---TGGTG----GT---GTTTATGG-TTGA-----A-----A-TAAC--C-AA-TTCC-TGGC-T-AA---GGG---TTCAT-AT-CGTCAATTTATT-AATATGTAGAATAGA-AAACTAT------TGGAA-A--TAT-------A-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATCAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-TCCTTAA--ATCAAA---TTACACTTCACT-CAATA-T--ACTCAAAATAC-GTTACAGCT-A--CATTACAAAT-AATGTA-A-CAC--T----ATGAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTCCAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCATT-A-AAA--TGCTGCCTGGGTGCTTCT-TAT---ACC---TATTTATAAGT-AATATTTCATTAC-AGTAC---CA---TA-AAC-TATG----TT-------AA-CA-TACAC-TGAAATGAAATAACCTTTA-AA-GTG-GT-A-TTTa
gi|12 : TTG-CAGGGG---TGGTGGTT-GT---GTTTGTAG-TAAA-----A-----AGCGAC--C-AAACGCC-TGTC-TTAA---GGT---TTCA--AT-TATCA--TTATT-AATAT-------GGA-G----------------A-A--TAT-----GTAATGGCCCCTAAAAGA--CA-AAATAGAGAACAATAAATCA-TCACATG-AATTTACCAATAAA-------TACCTGAATGAAATATTA-A------------TG--TAC-ATAATTTCCATCTTTAA--AGTT-AT-CTCCCCTTAA--ATCAAA---TTCCAC-TTACTCCAATA-TCAACTGAAAATAA-GTTATAAAT-G--CATTACAAAT--ATGT--A-CAC--TATTGA-AAAAATATATT-A-AAG-AAGTA--ATAAAAAGGC-AATA-A------TTGTAAT--TACCG---CA-TCT-ATG-GGACAAGGGCCCAAATCTCCAAGCAATAA-AAA-TTGCTA
gi|13 : ttgTTG-CAGGGT---TGTTG----GT---ATTTATAGGTAGA-----G-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGA---TTCAT-AT-CATCAATTTATC-ATCAT-------A--------AT------GGGAA-C--TATGGAGAATG-TGACCC-TAAAAGA--CA-AATTAG-TACCAATAAAT-A-TCACAAT-GATTT--CAATCAA-------TA---T-----------A-A------------TG--TAC-ATAATTTCACCCTTTTAG-AGTT-AT-CT-ACTTTAA--ATCAAA---TTACACTT
gi|14 : AACAATCA-AAA-GT-CAATCAGTATTTTTTTATACCTAA-C---CAT--ACAA---AATGTTTCACTAA-AATAA-TATT---TT-CGC-TATGATACCTATCGATAAG-CA-TACAC-TGAAATGAGATAA--TTCATAA-ATAAGT-A-TTTACGCGT-CTT-CG-TAACAG--TT----AAGATTTCACTTT----TCTCTCAAACAGT
gi|15 : catttgtttg-TATAT-TGAGATGAGATAACTTATA-AA-ATT-GT-A-TTTAC---CATTCATCGTGATATAGTT----CAATTTTCAGTTG----TCTCTCAAACAG-TG-A-TATA-GGCT-A---TA-CTAGTATAT-ACA-TATTGT-GTT-A-CTGAG-ATTA---ATAC----A--G-TCAGAT-CTGGACTC-AAATGTCTAC--AA-AATGTCT-TC-ga
gi|16 : TTT-TC-AAACTCAA-A-TATTCGAT--AT--GCAAAA-CT-GCTCAAC---GT--A-AAACC-ACT-ACC-----GAC---CTGACCAAAA-ACTCTC-AAGATTCT---GACTGAATA-AGACTC-A--GATAT-TC--CT-A--------------GACC-TTT-----------TAA-CACTC--GTGAAATAAA-AGGG-TGGATCTGG-GAATT---TGGCTTAA---ATAATA-gtc
gi|17 : taTTG-CAGGGG---TGGTG----GT---GTGTATGG-TAGA-----A-----A-TAAC--CCAA-CTCA-TGGC-T-AA---GGA---TTCAT-AT-CGTGAATTTATT-ATCATCATA---AGA-AA--TATGGAGAGTGGAA-A--AAT-----ACA---GCCC-TAAAAGA--CG-AAATGG-TAACAATAAAT-A-TCACAGC-GATTTA-CAAT-AA-------TG---T-----------A-A------------TG--T
gi|18 : gATAAA-GGGG-TGGATCTGG-GAATT---TGGCGTAATTTATAATA-AAATATATCTAT--TCTAATA-TG-CA-CAAATTGTGTTCATTAGAA----TATG-AC-ATTAA-ATA-TATATACAA--GTT-AAAA-CACACTGCT-ACA-T
gi|19 : CCTTTAAG-AGTT-AT-CT-CCCTT-A--ATTAAA-------ATTTTATG-TAGCA-C--TCT-AAGGTAT--TTACAGTT-G--CATTACAAGT-CGCGCA-A-CACTAT----G-AATACTATAaca
gi|2 : AAAA-CACACAGCT-ACA-TTCTTCCTCTTCTCTGAAAAATTACGTCCTCGT-CATTCTCTACAAAGA-ATGTACAA-ATATA----TAC--AAAATG-ATATATT-TACAAG-AAA-AA-TAAAATA-CCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|20 : agt----TACG-GC-ATCAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACatacttacaatgttcccttgtgtgaaatatgaactcaggtcttcttaacaatttctaggaaagtctttaaaatctcatttctttcaaaaccttggcaatgttcgtcttgcagaatgttgtgaagaaatttggctctctcagactaatgcaggtcagtggttctctgttgcatcctcacaaagtttccactccgtagcaattctggctctcttctagccctagcgtggagcagtaacaggtgaactcgtatcgtcggtctctgattcagcgtaagctgctggttcagtttcaggatcatatgcttgtggcacaggttccatgatcgcattctcctcttctgcatcatcttctagatgttatccaacatgatgagcgtcctcaactgatggaaaatctgcatcctcgattccggtttcaggcaacataatactagggacatcagagtgatgatgtcgtgttcctctgggaatctcaatgaagattgcttcctcctcatccgagtctattaggctttctacagttgaccgaatgtcactgtcttcccttatccttagtctcattctaggtttaggttttgaccgcattggtggaactggtttggaattcatttttggttgaaatttccttcaacatgtccaattggtaaaagtaggtttctgtacagaatcctcactcttccaacaccatcttccctctgtatattgtaaacttgaatgttttgatttggctgtttcatcacaatgtacgggtttcattcccatttttccgctaacttgtgacgtccatcgaaggctactactttaattagcactcggtatccctcttccagtacaacttctctggacttgagatcatagttgtctttttgtctttcctgtgctttacgtgtagcttctgatgctaactggtaggatttcctcaatcactcctttaggatttttatgtacttggtaagagatcttaatctttcgtttggtctatctaatccaaattctatgtct
gi|4 : AGGGG---TG-TG--TCGT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCCATGGCAT-AA---GGCGCTTTCATTATACGTCAATTTATTTAACAT-------AGCCA---TAT------TGGAACAGTTAT-----ATA-TGGTCT-AAAAGGA--CA-AAATA--TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------ACA------------TG--TACCATAATTTCAATCTTTAAGCAGTTTATTCT-CCCTTAA--ATCAAA---T-CCACTTTACT-CAATA-T--ACGGAAAATACCGTTATAAATCG--CATTACAAATTAATGTA-AACAC--T----G-AAAAATATAT--A-AGTTA--TA--GC-AAAAGGCCAAT-TACTACTCTTTTAAT--TACC----TAATCCGATGCGGAC---GGCCCAATTCTCCAAGCAAT-A-AAA-TTGTTACCTGAATGTTTCT-TACCTAAATGTGTATTTATAAGCAAATATTACATTACGGGTAC-TATA---TACAACATATAATACTTAT--ATAA--CACTATAC-TGAGATGAAAGAACTTTCA-AA-GTT-GG-ATTTTAC---TACTT-T--TAATAT--TT----AAACTTCCACTCT----TCTCTCAAACAGTTG-ACAATT-AGCT-AATGTAGATATTATGACAGATTA-TAT-GTTGA-GTAAACATTA---GTACTTTTGCTG-TTAGGT-CTGGA-TCGTAAGGTCTCC--AA-AGTCTTTATC-AAATTCAA-ACTATTTGAT--ATTCACAAAAACT-TCTCAAC---AT--ATAAATC-ACTCGCC-----AAC---CTGACCAAAAGACTTGA-GAGATTCCAAAAACTGAATAGAAACTT-AAGGATCT-ACAGCCAAATTGGAAAT------ACCGTTTTCACTCACCTTGAACCACTTA-AGGAAATAAAGGGGG-TGGATCCGGCGAATT---TGGCTTAA---AT-ATATACATATACCTTAAATCTAATA-TG-CACCAAATTATGTTTAGTAGGAAGTGTATG-GCGATTAA-ATA-TATATACAAATGTTAAAAA-CACA-TGCT-ACAGTTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGATATGTACAA-GCATA----TACAAAAAATG-ATCTATTGTACATGTAAA-----AAAAT-TCCATC----
gi|5 : tAT-AAAAT---ATGTACAGAATT--ACTTA
gi|6 : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGG---TTCATTAT-CGTCAATTTATT-AACAT-------AGGCA---TAT------TGGAA-A--TAT-----ATA-TGGTCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAATCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATA-T-A-AGT-A--TA--GC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCG-ATG-GGACAA-GGCCCAATTCTCCAAGCAAT-A-AAA-TTGTTACCTGAATGTTTCT-TACCTAAATG--TATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTCTA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAG-TG-A-AATT-AGCTAAATGTACATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTGCTG-TTAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTTATC-AAATTCAA-A-TATTTGAT--AT--TCAAAAACT-TCTCAAC---AT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCC---AACTGAATA-AAACTA-A--GATCT-ACAGCC-AAT--GAAAT------ACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCTG-GAATT---TGGCTTAA---ATAATA-TAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGA-ATGTACAA-GTATA----TAC--AAAATG-ATCTATT-TACATG-TAA-AA--AAAAT-TCCATC----TGT-----------------TGTACAGAATTC-ACTTAatacttacaaatggtcccttgtgtgaaaatttgaactcaggtcttcttcacaatttctaggagagtctttaaatctcatttctttcaaaaccctggcaatgctcgtcttgcaggatgtttgaaagaaatttggctctctcggaccaagcgggtcaatggttccctgttgcatcttcacaaagtttccactccgtaaccattcaggctctcgtctagtcctggttgatcggcgtggagcaataacaggtgaactcgtatcatctgtctctgattcagcgtcagctgctggttcagtttcagtgtcttctgcttgtggcgcaggtcctttattgcagtctcctcttctgcatcatcttctagatgttctccaacatgatgagcgtcctcaactgttggaaaatctgcatcctcgactccagtttcaggtaacacaatatagggacatcaggtgatgaatgtcgtgttcctccggaatgtcaatgaagactgcttcctcctcatccgagtctaatagggttttgcagttgactgagtgtcactgtcttccctttccttagtctctttctgggttttggtttggccgcattggtggaactggtttgggatccatttttggttggaattctgcaacatgtccaattggtaaaagtaagtttctgtgcagaatcctcactttccaataccatcttccctctgtattttgtaaacaggaatgtcttgatttggctggctcatacaatatacggatcctcttcccacttgtccgctaacttgtgacgttccatcaaaggctactactttgacaagcctcgatctccctcttccagtacaactcctctggacttgagattcatagttgtctttttgtcgctcctgtgctttacgtgtagcttctgatgctaatggtagattcctcaatcgctcctttaagttgtctatgtacttgtaagggatcttgatgtttcgttcggcctctctaatccaaattctatgtctattgg
gi|8 : TTG-CAGGGGATGTGATG--T-GT---ATTGGTA--TACATTTTTA-----A-TAAT--C-AA-CTCC-TGGC-T-AA---GGT---ATCATTAT-TATCAATTTATT-AACAT-------GGA----------------GAA------T-----ATA-TAGCCC-TAAAAGA--CA-AAATAT-TAACAATAAAT-A-TCACAGC-GATTTA-CAATGAA-------AA---G-----------A-A------------TG--TAC-AT---TTCAATATTTAAG-AGTT-AT-CT-CCCTTAA--AACGAA---TTCCACTTTACT-CAATA-T--ACTCAAAATAC-GTCATATCT-G--CATTACAAAT-AATGTA-A-CAC--T----ATAAAAATATGTTTA-AGT-A--TATAAC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCATTTCCCCAAGCATT-A-AAA-ATGCTACCTGGATGCTTCT-TACCTA--------TTTATAAG-AAATATTACATTAC-AGTAC-TATA---TA-CAC-TATAATACTTAT--ATAAG-CA-TATAT-CGAGGCGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATGT--TT----AAACTTTCACTCT----TCTCTCAAACAA-TG-A-AATT-AGCT-AA---A-A---------------------TT-A-G-------------TAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCC-T--AA-ATTCTTT-TTAAAATTCAA-A-TATTCTAT--AT--TC---GATTGACTCAAA---GT--A-AAAGC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGC-AAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-ATT--GAAATATCTAAACCTTTTTCACTCACCCATAA-CACTT--ATGAAATAAA-GGGG-TGGATCTGG-GAATT---TGGC-TAA---ATAATA-AAATACACCTTTAATCTAATA--A-CA-C-AATTATGTTTATTA-AA----TA
gi|9 : tTTGTCAGGGG---TGGTG--T-GTGCTGTT----G-TAGA-----ACATTCA-CACCTCC-CA-CTCC-TGTC-T-CACACGGA---GTCATTAT-CGT----TT-TT-AATAG-------AGA---------------GAAG-A--TCT-----TTAATGGCCC-TAAAAGGACCACAAATAA-TAACAATACAT-AATGACAGTTGATG-A-CAATAGAACGTTCATG---G-----------A-AAACTACTATAATTGGTTAC-ATTATTTCCACCTTTTAT-AGT--AT-C--CCCTTAACAAGCAAAATTCTCCACTTTACT-CAATAAT--ACTGAAAATAAAGTTATAAAT-GTCCATTACAAATTAATGTATA-CAC--TTAT-G-AGAAATATATA-AGAGA-A--TA--AT-AAAAGGC-AATAT-------TATTGATAATACCCGAGTA--CT-AAG-GGACAA-GGCCAAACTCCCAATGCAAT-ACAAACATGCTACTGGAATCTATCT-TA-TTATAC---T-CTAATAAGCCAATA-TAC-TTAC-AGTACTTATACAGTA-AAC---TAATACGT-----TAAGCCG-TATACTTGAGCTGAAAGAACTTTCG-AACGTG-GTCA-TTTAC---TACTT-T--T-ATAT--TTAAGAAAGCTTTCCCCCTCGTGTCTCTCAAACAGTTGAA-AATTAAGCT-AAg
blockSeqs : T ATG G TGTGCT G TTTTTA G TC C A A A T CAC CGCT T A T CATAAGAAATATGGAGAGT CAGT GGAGAA A C AC C GA C A T C A ACGTTCATGGAAAACTACTATAAT GT C A C T T C CA ATT C A CA G C A C TC TA T A TA ATTGA TT G T AG TA A C CTACTC AA CGAG A G C G A C CA A CC AATGTGTA CA GG T CAG C A ATCG GC C T T C A C T . ATCG G AG AAGA CGTG T A C A A ATGTAGAT T AC T T . G . C . TTT . . C GT AC . A A . C C . TCA AA GA . . T . C . . G C AAA G . AG . AAATTG ATCTAA G A TT C A G . C . T TTT T TG C AGTG . G . . AT T T G G AT T ATCT AA T TA G T CAATT AT . CATCATAAAAT C
blockSeqs : . . T GTTGT . ACATTC . . . . . . . . T T . . AGCCATATT A G A . . . G . . . . C TACCTGAATGAAATATTAA . . A . . . . . . . . . G A T . . TA . . . TATG T . . . . . . . . G . . . . C . T . CC AATGTA CC A . . . . AT G . . . . . . . . T A . . . T . . . . ATGTACAT T T . . . . . . . T . . . A CC . A . . . T . G AA G . . . . . . . . A . . . . . AAT G G A TA . . . . . . G . . TG . . . . . . . . . . . A . . . . AT . . AAT A . . C
blockSeqs : . . G TCGTT . A . . . . . . . . A T . . AGGCATATT C A . . . . G . . . . A TAGACA . . A . . . . . . . . . G . A . . C . . . AT T . . . . . . . . . . . . . . . G . CC ACCA A G . . . . AT G . . . . . . . . T A . . . . . . . . AAA . A . . . . . . . T . . . T C . . . . . T . T AA T . . . . . . . . A . . . . . ATT . T A CA . . . . . . T . . TG . . . . . . . . . . . A . . . . AT . . AA T . .
blockSeqs : . . G TGTT . G . . . . . . . . A T . . GGAG A A . . . . G . . . . A TATAA . . A . . . . . . . . . C . A . . A . . . G A . . . . . . . . . . . . . . . T . CC TACT A A . . . . AT G . . . . . . . . T A . . . . . . . . . . . . . . . . . . . . T T . . . . . C . T . T . . . . . . . . C . . . . . A . . . . . . . . . . T . . A . . . . . . . . . . . . . . . . AT . . . T .
blockSeqs : . . A TGT . A . . . . . . . . G . . . AATG A A . . . . T . . . . G TGTAA . . T . . . . . . . . . G . C . . A . . . G . . . . . . . . . . . . . . . . T . T . . A . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . .
blockSeqs : . . G GT . A . . . . . . . . T . . . GGA A A . . . . A . . . . A TAGAA . . . . . . . . . . . . . . A . . . . . . G . . A . . . . . . . . .
blockSeqs : . . GT . A . . . . . . . . A . . . AGA . T . . . . . . . . . . AAGAA . . . . . . .
blockSeqCons : AGAAT******************** A***** TG**** T* CC ATNCA*** A* AT** *** T*** *** T* C*** ** *** ** ***** *** N* G***** TA ** *** TG** A* **** T* ****
originalCons : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT-------AGA-A---TAT------TGGAA-A--TAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAA-NTGCTACCTGAATGTTTCT-TACCTAAAC---TATTTATAAGCAAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
finalCons : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACATAGAAT--------------------GGAA-A--TATA-----TA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--TTG----AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAAT-TGCTACCTGAATGTTTCT-TACCTAATNCA---TTTATAAGA-AATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTTT---TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCT-AATGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TCT-AAGGTCTC---AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGN-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAATG-----ACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATATG--CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATA----TAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATT-CCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|3 ): ACTATACAAAGGTCCTTGTTGATATACATATCGTCTTCTTCACAACTTTCTAGGAGAGTCTTTAAAATCTCATTTCTTTCAAAACCCTGCAATGCTCGTCTTGCAGAATGTTTGTAAGAAATTTGGCTCTCTCGGACGCAATGCGGTCAGTGGTTCCCTGTTGCATCTTACAAAGTTCCACTCCGTAACCATTCAGGCTTCTCTTCTAGTCCTGGTTGATCGGCGTGGAGCATAACAGAGTGAACTCGTATCATCTGTCTCTGATTTCAGCGTCAGCTTGGTTTCAGTTTCCAGGCATCGTCTGTTGGCCCACGATTCCTTGTGAGGCTCTATCCATATCAGCAAGTCCTCCTCTTCTGCATCATGCTTCTAATGTTCGGTACACCATATGCTTCATGCGAGCCTTGCCCTCAAGTTTGGGAAAATCGACCCTCGTTGCAGTTCAATTCATCTTAATTTGATTATCAAGGCAACTACAAAAACTAAGGGGAACTATTTCATGGTTTCTTACCTGTTTGACGTTGAACAAAGACTGCGTCATGTGATTTGCGTGGATATCTAGTATTTTCGTGAAGACTGCTTCTCTTCATCCGAGATCTATAGTGGTACCATATATACTTTGGATACGTGATTACAGGTGTCACTGTCTTCCCCTCTCTCTCATATAGTCTCCTCTTCTGTAGTATATAATTAGATTTGTCTGCCGCATTTCTCGATAGGAATGGGTGGGATCATGTTTTGCGTATTTGAATACTGCAACATAGTCCATTCCATAATTCCCGTGTAAAAGTTAAGTTTCTTGGTGTCAGACATCCTCACTCTCCAACATCCATCTACCCTCTGTACTGCTTGAAACAGGATATCTTTGATGGCCTGGTTCGAAATCAACGAAGGTAACGTCGCACAGAGGATCCTCTCCCTACTTGTCCGCTAACTTTGTGACACTGACTCCATCAAGGGTCATTCCTACTTATCTTCACAATACTAGCACCTATCTCCCCTTCCGAGAGACAATCCTCCTGTCTGACAATACGGTTCGTCTTTTTTGTCGCTTCCTTAGTGCGTTTACGATGTAGGGACTACTAGGAATTGCTAACTGGAGAT
Unaligned ( gi|7 ): ATGAAGTCAGGTCTTCTTCACAATTTCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCTAGCCCTGGTTGATCTGCGTGGAGCAGTAACAGGTGAACTCGTATCGTCGGTCTCTGATTCAGCGTTAGCTGCTGGTTCAGTTTCAGGATCATCTGCTTGTGGCGCAGGTTCCATGATCACAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCATCGATTCCAGTTTCAGGCAACACAATACTAGGGGACATCAGGGTGATGATGTCGTGTTCCTCTAGGAATCTCAATGAAGACTGCTTCCTCTTCATCCGAGTCTAATAGGGTTTCTGCATTTGACTGAGTGTCACTGTCTCCCCCCTTTCCTTAGTCTCTTTCTGGGTTTAGATTTTGGCCGCATTGGTGGAATTGGTTTGGGATCCATCTTTGGTTTGAATTCTGCAACATGTCCAATCGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTCTTCCAACACCATCTTCCCTCTGTACTTTGTAAACAGGAATATCTTGATTTGGCTGTTTAATCACAATATACGGATCCTCTTCCCCCTTGTCCGCTAACTTGTGACGTCCACCAAAGGCTACTACTTTAACTAGCACTCTATCTCCCTCTTCCAGTACAACTTCTCTGGACTTGCTGAAGATCATAGTTGATCTTTTGATCGCTTCCTGTGCTTATACGGTGTAGCTTCTGAATGCAACTGGATAGGATTTCTGAATCGCTCCTTTAGATTAGTCTATTACTACTGGTAAG
Alignments
lowQualScore : 333333333 11111111111 1 7777777777777777777777777777777777777777777777 1 444444444444444444444444444444444444444 1 11 2222 11 111111 2222 1 11 3333333 1 111 1111 111 1111 1111 1111 222222222 111 111 11 2222 1 11 111 111 11 22222 111 111 11 111111 333333 11 111 111 1111 1111 1 1 2 11 2 3333 11 2 22222 1 1111 2222222222222222 11
lowQualScore : 5 888 1 000000000 0 5 77777777777 5 66 5 5 5 5 5 888 9999 2 5 0 5 0 2222222222222222222222222222222222222222222222 0 5 66 5 66 5 5 5 5 5 666666666666666666666666666666666666666 66 5 1 5 5 5 5 66 888 0 5 5 77 4 1 1 5 77 22 5 5 77 8888 5 88 6 6 99 99 6 6 999999 99 0000 6 6 6 6 1 5 33 0 6 33 5555555 3 77 6 111 6 6 5555 77 5 5 0 5 5 5 5 5 111 6666 1 99 4444 4444 88 8 8 8 888888888 3 99 8 8 8 8 8 0 8 444 111 8 8 8 44 0000 8 3 6 8 8 1 11 222 11 0 99 444 11 8 8 8 00000 444 8 99 444 8 8 11 8 0 666666 333333 5 0 5 99 8 99 6 6 0 6 111 7 111 6 0 0000 8 0 4444 8 8 8 8 99 1 1 6 0 0 88 0 4444 11 0 22 8 8 77777 6 7777 8888888888888888 22
lowQualScore : . ... . ......... . . ........... . .. . . . . . ... .... . . . . . .............................................. . . .. . .. . . . . . ....................................... .. . . . . . . .. ... . . . .. . . . . .. .. . . .. .... . .. . . .. .. . . ...... .. .... . . . . . . .. . . .. ....... . .. . ... . . .... .. . . . . . . . . ... .... . .. .... .... .. . . . ......... . .. . . . . . . . ... ... . . . .. .... . . . . . . .. ... .. . .. ... .. . . . ..... ... . .. ... . . .. . . ...... ...... . . . .. . .. . . . . ... . ... . . .... . . .... . . . . .. . . . . . .. . .... .. . .. . . ..... . .... ................ ..
lowQualScore : 7 888 4 888888888 1 0 99999999999 0 99 0 0 0 0 0 888 8888 4 0 1 0 5 1111111111111111111111111111111111111111111111 0 0 99 0 44 0 0 0 0 0 666666666666666666666666666666666666666 99 7 7 0 0 0 0 99 888 1 7 7 99 3 4 6 7 99 99 7 7 99 0000 7 33 7 7 22 22 7 7 222222 22 8888 7 7 7 7 4 7 00 3 7 55 5555555 3 33 7 777 7 7 5555 77 7 7 7 7 7 7 7 7 777 0000 7 22 2222 2222 11 0 0 0 888888888 0 00 0 0 0 0 0 8 0 000 888 0 0 0 00 2222 0 3 7 0 0 4 00 000 44 8 00 000 00 0 0 0 00000 000 0 00 000 0 0 00 0 8 666666 222222 0 8 6 66 0 00 7 7 7 7 777 2 777 7 8 0000 0 8 2222 0 0 0 0 22 4 4 7 6 0 66 4 0000 00 4 88 0 0 66666 0 0000 2222222222222222 55
consensus : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT--------------AG----AGTGGAA-A-----T----AT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T-T--G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAAN-TGCTACCTGAATGTTTCT-TACCTAA---CGTATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCTAA-TGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATAATCTTAC--AAAATGTATCTATT-TACATG-AAACAATTAAAATATCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
Reference ( family-739 ) : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-TAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGN---TTCATTAT-CGTCAATTTATT-AACAT--------------AG----AATGGAA-A-----T----AT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T-T--G-AAAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCAAT-A-AAAT-TGCTACCTGAATGTTTCT-TACCTAA---TNCATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGTTG-A-AATT-AGCTAA-TGTA-ATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTT-TC-AAATTCAA-A-TATTCGAT--AT--NCAAAAACT-NCTCAAC---GT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGN-GAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-AAT--GAAAT-----GACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCGG-GAATT---TGGCTTAA---ATAATA-AAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTTCTCTGAAAAATTACGTCCTCGTGCATTCTCTACGAAGA-ATGTACAATGTATA----TAC--AAAATGTATCTATT-TACATG-AAACAATTAAAAT-TCCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|1 : AA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATCTATTTTTTATCCATGAAAATAAAAAGTCGAGAATTCGACTTA
gi|10 : TATGA-AGA-TA-TATAGCT-AAGTAAA-ATTATAGGTAC--TTACTGGTCAGGTTCTGGA-TA--AAGGTCT-CGGAACAGTCTTT-TC-AAATTCAATA-TATTAGACTCAT--AAACAAACT-GCTCAAAAAGGTCAA-AAATTTACT-TTCCTCACAACGGCCTGAC--AAA-ACTTGAAGAGGTTCT---AACTGAATA-AAACTCCA--GATTTTACAGAC-CAT--GAAAT-----GACCGTTTTC-CTCACC-ATGA-CATTTGTAGGAAATAAA-GGGGGTGGATCTGG---ATTAGTTGGCGTAA---ATAATA-AACAATACCTTTAATCTAATAATGATA-CAAATTATGTTATTTAGAA----TATGTGC-ATTTATATAATACACACAA--GTTAAAAATCACACTGCTTACA-TTCCTCCCTCTCTCTGAAAAATGACGTCCTCGTGCATTCTCTACGAAG--ATGTACAATGTATAATCTTAC--AAAATGTATCTTAT-TACATG-AAACAATTAAAATATCCATC----Tatacttgacaaaggtcccttgttctgaaatacacactcggatcgtcacatttctagggagctccttaaaatccattcatttctttcaaaaccctggcatctctgtccttgcagaatgttttagaagaacatgattggcctttcttcatcggaccacagttgcggtcatggttccctattcatcttacacaaagttttcacccgtaaacattcaggctctcgttctagtcgctggttaataaggcgtgtatgcatacaggtgaactcgtatcagtctgtctctgactgtcagcgtgcgctgctggctttagtttcagtgtctggaatcttctgcttgtggcgacaggttctttgcatctggcgagaatctcctactcatagcagtcatttcctaagagtgtttctctccaagcatgagcagcgtcctcaacttgttgaccatgtgcatcgctcgtattcagttgccaggaaacacaattactgggtgaatgatgtcgtgttcctactggaatctcaatgaagactgtgcttccttcctcattccgagtctaatagggtttacttgcaagttgactgagtgtcaagagcgctgtcttcaccctttcagtctctttctgggtttttggtttgtgccaggacgattaggtggaactggtttgcggaagtactaacttttttggttggaattgctgcaacctgtcaattggtgaaagtagagtttctggcagaatccctcactgctatcgcaacagccaatcttccatctgtatttgtaaacaaagaaagtgtctgtgatttgggctggctcacactatatacgacttcttcccatcttccgctaacttgtgacgatccatgcaagcaggctactaatcggtgttagtctaagacactcgatctgccctcttccagtaacagacttcctctggacttgagatcatagtctgtctttttttgtcgctccgcctgctttacgtgtaagctcctgagtgctaactggatagggaatttcttcaaatcgctactttaagggttgtctatgtgatcttatggtaagggaaatacttgatgttcgttcgttcggtctaaaatcaaattctgattctatggc
gi|11 : aTTG-CAGGGG---TGGTG----GT---GTTTATGG-TTGA-----A-----A-TAAC--C-AA-TTCC-TGGC-T-AA---GGG---TTCAT-AT-CGTCAATTTATT-AATATGT------------AG----AATAGAA-AACTATTGGAAAT-----ATA-TGGCCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATCAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAACCTTTAAG-AGTT-AT-CT-TCCTTAA--ATCAAA---TTACACTTCACT-CAATA-T--ACTCAAAATAC-GTTACAGCT-A--CATTACAAAT-AATGTA-A-CAC--TAT--G--AAAATATATT-A-AGT-A--TA--AC-AAAAGGC-AATATA------TTCCAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCAATTCCCCAAGCATT-A-AAA--TGCTGCCTGGGTGCTTCT-TAT---A---CCTATTTATAAG-TAATATTTCATTAC-AGTAC---CA---TA-AAC-TATG----TT-------AA-CA-TACAC-TGAAATGAAATAACCTTTA-AA-GTG-GT-A-TTTa
gi|12 : TTG-CAGGGG---TGGTGGTT-GT---GTTTGTAG-TAAA-----A-----AGCGAC--C-AAACGCC-TGTC-TTAA---GGT---TTCA--AT-TATCA--TTATT-AATAT--------------GG----AG----A-A-----T----AT-----GTAATGGCCCCTAAAAGA--CA-AAATAGAGAACAATAAATCA-TCACATG-AATTTACCAATAAA-------TACCTGAATGAAATATTA-A------------TG--TAC-ATAATTTCCATCTTTAA--AGTT-AT-CTCCCCTTAA--ATCAAA---TTCCAC-TTACTCCAATA-TCAACTGAAAATAA-GTTATAAAT-G--CATTACAAAT--ATGT--A-CACTAT-T--GAAAAAATATATT-A-AAG-AAGTA--ATAAAAAGGC-AATA-A------TTGTAAT--TACCG---CA-TCT-ATG-GGACAAGGGCCCAAATCTCCAAGCAATAA-AAAT-TGCTA
gi|13 : ttgTTG-CAGGGT---TGTTG----GT---ATTTATAGGTAGA-----G-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGA---TTCAT-AT-CATCAATTTATC-ATCAT--------------A------ATGGGA-AC----T----ATGGAGAATG-TGACCC-TAAAAGA--CA-AATTAG-TACCAATAAAT-A-TCACAAT-GATTT--CAATCAA-------TA---T-----------A-A------------TG--TAC-ATAATTTCACCCTTTTAG-AGTT-AT-CT-ACTTTAA--ATCAAA---TTACACTT
gi|14 : AACAATCA-AAAG-T-CAATCAGTATTTTTTTATACCTAA---CC-----ATACA-AAATGTTTCACTAA-AATAA-TATT---TT-CGC-TATGATACCTATCGATAAG-CA-TACAC-TGAAATGAGATAA--TTCATAA-ATAAGT-A-TTTACGCGT-CTT-CG-TAACAG--TT----AAGATTTCACTTT----TCTCTCAAACAGT
gi|15 : catttgtttg-TATAT-TGAGATGAGATAACTTATA-AA-ATT-GT-A-TTTAC---CATTCATCGTGATATAGTT----CAATTTTCAGTTG----TCTCTCAAACAG-TG-A-TATA-GGCTA----TA-CTAGTATAT-ACA-TATTGT-GTT-A-CTGAG-ATTA---ATAC----A--G-TCAGAT-CTGGACTC-AAATGTCTAC--AA-AATGTCT-TC-ga
gi|16 : TTT-TC-AAACTCAA-A-TATTCGAT--AT--GCAAAA-CT-GCTCAAC---GT--A-AAACC-ACT-ACC-----GAC---CTGACCAAAA-ACTCTC-AAGATTCT---GACTGAATA-AGACTC-A--GATAT-TC--CT-A--------------GACC-TTT-----------TAA-CACTC--GTGAAATAAA-AGGG-TGGATCTGG-GAATT---TGGCTTAA---ATAATA-gtc
gi|17 : taTTG-CAGGGG---TGGTG----GT---GTGTATGG-TAGA-----A-----A-TAAC--CCAA-CTCA-TGGC-T-AA---GGA---TTCAT-AT-CGTGAATTTATT-ATCATCATAAGAAATATGGAG----AGTGGAA-A-----A----AT-----ACA---GCCC-TAAAAGA--CG-AAATGG-TAACAATAAAT-A-TCACAGC-GATTTA-CAAT-AA-------TG---T-----------A-A------------TG--T
gi|18 : gATAAA-GGGG-TGGATCTGG-GAATT---TGGCGTAATTTATAATA-AAATATATCTAT--TCTAATA-TG-CA-CAAATTGTGTTCATTAGAA----TATG-AC-ATTAA-ATA-TATATACAA--GTT-AAAA-CACACTGCT-ACA-T
gi|19 : CCTTTAAG-AGTT-AT-CT-CCCTT-A--ATTAAA-------ATTTTATG-TAGCA-C--TCT-AAGGTAT--TTACAGTT-G--CATTACAAGT-CGCGCA-A-CAC--TAT--G-AATACTATAaca
gi|2 : AAAA-CACACAGCT-ACA-TTCTTCCTCTTCTCTGAAAAATTACGTCCTCGT-CATTCTCTACAAAGA-ATGTACAA-ATATA----TAC--AAAATG-ATATATT-TACAAG-AAA-AA-TAAAAT-ACCATC----TTTCAT-CAT-AAAAT---ATGTACAGAATTC-ACTTA
gi|20 : agt----TACG-GC-ATCAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACatacttacaatgttcccttgtgtgaaatatgaactcaggtcttcttaacaatttctaggaaagtctttaaaatctcatttctttcaaaaccttggcaatgttcgtcttgcagaatgttgtgaagaaatttggctctctcagactaatgcaggtcagtggttctctgttgcatcctcacaaagtttccactccgtagcaattctggctctcttctagccctagcgtggagcagtaacaggtgaactcgtatcgtcggtctctgattcagcgtaagctgctggttcagtttcaggatcatatgcttgtggcacaggttccatgatcgcattctcctcttctgcatcatcttctagatgttatccaacatgatgagcgtcctcaactgatggaaaatctgcatcctcgattccggtttcaggcaacataatactagggacatcagagtgatgatgtcgtgttcctctgggaatctcaatgaagattgcttcctcctcatccgagtctattaggctttctacagttgaccgaatgtcactgtcttcccttatccttagtctcattctaggtttaggttttgaccgcattggtggaactggtttggaattcatttttggttgaaatttccttcaacatgtccaattggtaaaagtaggtttctgtacagaatcctcactcttccaacaccatcttccctctgtatattgtaaacttgaatgttttgatttggctgtttcatcacaatgtacgggtttcattcccatttttccgctaacttgtgacgtccatcgaaggctactactttaattagcactcggtatccctcttccagtacaacttctctggacttgagatcatagttgtctttttgtctttcctgtgctttacgtgtagcttctgatgctaactggtaggatttcctcaatcactcctttaggatttttatgtacttggtaagagatcttaatctttcgtttggtctatctaatccaaattctatgtct
gi|4 : AGGGG---TG-TG--TCGT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCCATGGCAT-AA---GGCGCTTTCATTATACGTCAATTTATTTAACAT--------------AGCCATATTGGAACAGT---T----AT-----ATA-TGGTCT-AAAAGGA--CA-AAATA--TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------ACA------------TG--TACCATAATTTCAATCTTTAAGCAGTTTATTCT-CCCTTAA--ATCAAA---T-CCACTTTACT-CAATA-T--ACGGAAAATACCGTTATAAATCG--CATTACAAATTAATGTA-AACAC--T----G-AAAAATATAT--A-AGTTA--TA--GC-AAAAGGCCAAT-TACTACTCTTTTAAT--TACC----TAATCCGATGCGGAC---GGCCCAATTCTCCAAGCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAATGTGTATTTATAAGCAAATATTACATTACGGGTAC-TATA---TACAACATATAATACTTAT--ATAA--CACTATAC-TGAGATGAAAGAACTTTCA-AA-GTT-GG-ATTTTAC---TACTT-T--TAATAT--TT----AAACTTCCACTCT----TCTCTCAAACAGTTG-ACAATT-AGCTAA-TGTAGATATTATGACAGATTA-TAT-GTTGA-GTAAACATTA---GTACTTTTGCTG-TTAGGT-CTGGA-TCGTAAGGTCTCC--AA-AGTCTTTATC-AAATTCAA-ACTATTTGAT--ATTCACAAAAACT-TCTCAAC---AT--ATAAATC-ACTCGCC-----AAC---CTGACCAAAAGACTTGA-GAGATTCCAAAAACTGAATAGAAACTT-AAGGATCT-ACAGCCAAATTGGAAAT------ACCGTTTTCACTCACCTTGAACCACTTA-AGGAAATAAAGGGGG-TGGATCCGGCGAATT---TGGCTTAA---AT-ATATACATATACCTTAAATCTAATA-TG-CACCAAATTATGTTTAGTAGGAAGTGTATG-GCGATTAA-ATA-TATATACAAATGTTAAAAA-CACA-TGCT-ACAGTTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGATATGTACAA-GCATA----TACAAAAAATG-ATCTATTGTACATGTAAA-----AAAAT-TCCATC----
gi|5 : tAT-AAAAT---ATGTACAGAATT--ACTTA
gi|6 : TTG-CAGGGG---TGGTG--T-GT--TGTTTGTAG-CAGA-----A-----A-TAAC--C-AA-CTCC-TGGC-T-AA---GGG---TTCATTAT-CGTCAATTTATT-AACAT--------------AGGCATATTGGAA-A-----T----AT-----ATA-TGGTCC-TAAAAGA--CA-AAATAG-TAACAATAAAT-A-TCACAGC-GATTTA-CAATAAA-------TA---G-----------A-A------------TG--TAC-ATAATTTCAATCTTTAAG-AGTT-AT-CT-CCCTTAA--ATCAAA---TTCCACTTTACT-CAATA-T--ACTGAAAATAC-GTTATAAAT-G--CATTACAAAT-AATGTA-A-CAC--T----G-AAAAATATAT--A-AGT-A--TA--GC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCG-ATG-GGACAA-GGCCCAATTCTCCAAGCAAT-A-AAAT-TGTTACCTGAATGTTTCT-TACCTAAA--TGTATTTATAAG-AAATATTACATTAC-GGTAC-TATA---TA-AAC-TATAATACTTAT--ATAAG-CA-TATAC-TGAGATGAAAGAACTTCTA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATAT--TT----AAACTTTCACTCT----TCTCTCAAACAGT-G-A-AATT-AGCTAAATGTACATATTATGA-AGA-TA-TAT-GTT-A-GTAAA-ATTA---GTAC--TTGCTG-TTAGGT-CTGGA-TC-TAAGGTCT-C--AA-AGTCTTTATC-AAATTCAA-A-TATTTGAT--AT--TCAAAAACT-TCTCAAC---AT--A-AAATC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGA-GAGATTCC---AACTGAATA-AAACTA-A--GATCT-ACAGCC-AAT--GAAAT------ACCGTTTTCACTCACCTATAA-CACTT--AGGAAATAAA-GGGG-TGGATCCTG-GAATT---TGGCTTAA---ATAATA-TAATATACCTTTAATCTAATA-TG-CA-CAAATTATGTTTATTAGAA----TATG-GC-ATTAA-ATA-TATATACAA--GTTAAAAA-CACACTGCT-ACA-TTCTTCCCCTCCTCTGAAAAATTACGTCCTCGT-CATTTTCCACGAAGA-ATGTACAA-GTATA----TAC--AAAATG-ATCTATT-TACATG-TAA-AA--AAAAT-TCCATC----TGT-----------------TGTACAGAATTC-ACTTAatacttacaaatggtcccttgtgtgaaaatttgaactcaggtcttcttcacaatttctaggagagtctttaaatctcatttctttcaaaaccctggcaatgctcgtcttgcaggatgtttgaaagaaatttggctctctcggaccaagcgggtcaatggttccctgttgcatcttcacaaagtttccactccgtaaccattcaggctctcgtctagtcctggttgatcggcgtggagcaataacaggtgaactcgtatcatctgtctctgattcagcgtcagctgctggttcagtttcagtgtcttctgcttgtggcgcaggtcctttattgcagtctcctcttctgcatcatcttctagatgttctccaacatgatgagcgtcctcaactgttggaaaatctgcatcctcgactccagtttcaggtaacacaatatagggacatcaggtgatgaatgtcgtgttcctccggaatgtcaatgaagactgcttcctcctcatccgagtctaatagggttttgcagttgactgagtgtcactgtcttccctttccttagtctctttctgggttttggtttggccgcattggtggaactggtttgggatccatttttggttggaattctgcaacatgtccaattggtaaaagtaagtttctgtgcagaatcctcactttccaataccatcttccctctgtattttgtaaacaggaatgtcttgatttggctggctcatacaatatacggatcctcttcccacttgtccgctaacttgtgacgttccatcaaaggctactactttgacaagcctcgatctccctcttccagtacaactcctctggacttgagattcatagttgtctttttgtcgctcctgtgctttacgtgtagcttctgatgctaatggtagattcctcaatcgctcctttaagttgtctatgtacttgtaagggatcttgatgtttcgttcggcctctctaatccaaattctatgtctattgg
gi|8 : TTG-CAGGGGATGTGATG--T-GT---ATTGGTA--TACATTTTTA-----A-TAAT--C-AA-CTCC-TGGC-T-AA---GGT---ATCATTAT-TATCAATTTATT-AACAT--------------GG----A---GAA-------------T-----ATA-TAGCCC-TAAAAGA--CA-AAATAT-TAACAATAAAT-A-TCACAGC-GATTTA-CAATGAA-------AA---G-----------A-A------------TG--TAC-AT---TTCAATATTTAAG-AGTT-AT-CT-CCCTTAA--AACGAA---TTCCACTTTACT-CAATA-T--ACTCAAAATAC-GTCATATCT-G--CATTACAAAT-AATGTA-A-CAC--T-A--T-AAAAATATGTTTA-AGT-A--TATAAC-AAAAGGC-AATATA------TTTTAAT--TACC----TA-TCT-ATG-GGACAA-GGCCCATTTCCCCAAGCATT-A-AAAA-TGCTACCTGGATGCTTCT-TACCTA--------TTTATAAG-AAATATTACATTAC-AGTAC-TATA---TA-CAC-TATAATACTTAT--ATAAG-CA-TATAT-CGAGGCGAAAGAACTTTCA-AA-GTG-GT-A-TTTAC---TACTT-T--TAATGT--TT----AAACTTTCACTCT----TCTCTCAAACAA-TG-A-AATT-AGCTAA----A-A---------------------TT-A-G-------------TAC--TTACTG-TCAGGT-CTGGA-TC-TAAGGTCC-T--AA-ATTCTTT-TTAAAATTCAA-A-TATTCTAT--AT--TC---GATTGACTCAAA---GT--A-AAAGC-ACT-GCC-----AAC---CTGACCAAAA-ACTTGC-AAGATTCT---AACTGAATA-AAACTC-A--GATCT-ACAGCC-ATT--GAAATATCTAAACCTTTTTCACTCACCCATAA-CACTT--ATGAAATAAA-GGGG-TGGATCTGG-GAATT---TGGC-TAA---ATAATA-AAATACACCTTTAATCTAATA--A-CA-C-AATTATGTTTATTA-AA----TA
gi|9 : tTTGTCAGGGG---TGGTG--T-GTGCTGTT----G-TAGA-----ACATTCA-CACCTCC-CA-CTCC-TGTC-T-CACACGGA---GTCATTAT-CGTT--TTTA------AT--------------AG----AGAGAAG-A-----T----CT-----TTAATGGCCC-TAAAAGGACCACAAATAA-TAACAATACAT-AATGACAGTTGATG-A-CAATAGAACGTTCATG---G-----------A-AAACTACTATAATTGGTTAC-ATTATTTCCACCTTTTAT-AGT--AT-C--CCCTTAACAAGCAAAATTCTCCACTTTACT-CAATAAT--ACTGAAAATAAAGTTATAAAT-GTCCATTACAAATTAATGTATA-CAC--T-TATG-AGAAATATATA-AGAGA-A--TA--AT-AAAAGGC-AATAT-------TATTGATAATACCCGAGTA--CT-AAG-GGACAA-GGCCAAACTCCCAATGCAAT-ACAAACATGCTACTGGAATCTATCT-TA--TTA---TACTCTAATAAGCCAATA-TAC-TTAC-AGTACTTATACAGTA-AAC---TAATACGT-----TAAGCCG-TATACTTGAGCTGAAAGAACTTTCG-AACGTG-GTCA-TTTAC---TACTT-T--T-ATAT--TTAAGAAAGCTTTCCCCCTCGTGTCTCTCAAACAGTTGAA-AATTAAGCTAA-g
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|3 ): ACTATACAAAGGTCCTTGTTGATATACATATCGTCTTCTTCACAACTTTCTAGGAGAGTCTTTAAAATCTCATTTCTTTCAAAACCCTGCAATGCTCGTCTTGCAGAATGTTTGTAAGAAATTTGGCTCTCTCGGACGCAATGCGGTCAGTGGTTCCCTGTTGCATCTTACAAAGTTCCACTCCGTAACCATTCAGGCTTCTCTTCTAGTCCTGGTTGATCGGCGTGGAGCATAACAGAGTGAACTCGTATCATCTGTCTCTGATTTCAGCGTCAGCTTGGTTTCAGTTTCCAGGCATCGTCTGTTGGCCCACGATTCCTTGTGAGGCTCTATCCATATCAGCAAGTCCTCCTCTTCTGCATCATGCTTCTAATGTTCGGTACACCATATGCTTCATGCGAGCCTTGCCCTCAAGTTTGGGAAAATCGACCCTCGTTGCAGTTCAATTCATCTTAATTTGATTATCAAGGCAACTACAAAAACTAAGGGGAACTATTTCATGGTTTCTTACCTGTTTGACGTTGAACAAAGACTGCGTCATGTGATTTGCGTGGATATCTAGTATTTTCGTGAAGACTGCTTCTCTTCATCCGAGATCTATAGTGGTACCATATATACTTTGGATACGTGATTACAGGTGTCACTGTCTTCCCCTCTCTCTCATATAGTCTCCTCTTCTGTAGTATATAATTAGATTTGTCTGCCGCATTTCTCGATAGGAATGGGTGGGATCATGTTTTGCGTATTTGAATACTGCAACATAGTCCATTCCATAATTCCCGTGTAAAAGTTAAGTTTCTTGGTGTCAGACATCCTCACTCTCCAACATCCATCTACCCTCTGTACTGCTTGAAACAGGATATCTTTGATGGCCTGGTTCGAAATCAACGAAGGTAACGTCGCACAGAGGATCCTCTCCCTACTTGTCCGCTAACTTTGTGACACTGACTCCATCAAGGGTCATTCCTACTTATCTTCACAATACTAGCACCTATCTCCCCTTCCGAGAGACAATCCTCCTGTCTGACAATACGGTTCGTCTTTTTTGTCGCTTCCTTAGTGCGTTTACGATGTAGGGACTACTAGGAATTGCTAACTGGAGAT
Unaligned ( gi|7 ): ATGAAGTCAGGTCTTCTTCACAATTTCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCTAGCCCTGGTTGATCTGCGTGGAGCAGTAACAGGTGAACTCGTATCGTCGGTCTCTGATTCAGCGTTAGCTGCTGGTTCAGTTTCAGGATCATCTGCTTGTGGCGCAGGTTCCATGATCACAGTCTCCTCTTCTGCATCATCTTCTAGATGTTCTCCAACATGATGAGCGTCCTCAACTGTTGGAAAATCTGCATCATCGATTCCAGTTTCAGGCAACACAATACTAGGGGACATCAGGGTGATGATGTCGTGTTCCTCTAGGAATCTCAATGAAGACTGCTTCCTCTTCATCCGAGTCTAATAGGGTTTCTGCATTTGACTGAGTGTCACTGTCTCCCCCCTTTCCTTAGTCTCTTTCTGGGTTTAGATTTTGGCCGCATTGGTGGAATTGGTTTGGGATCCATCTTTGGTTTGAATTCTGCAACATGTCCAATCGGTAAAAGTAAGTTTCTGTGCAGAATCCTCACTCTTCCAACACCATCTTCCCTCTGTACTTTGTAAACAGGAATATCTTGATTTGGCTGTTTAATCACAATATACGGATCCTCTTCCCCCTTGTCCGCTAACTTGTGACGTCCACCAAAGGCTACTACTTTAACTAGCACTCTATCTCCCTCTTCCAGTACAACTTCTCTGGACTTGCTGAAGATCATAGTTGATCTTTTGATCGCTTCCTGTGCTTATACGGTGTAGCTTCTGAATGCAACTGGATAGGATTTCTGAATCGCTCCTTTAGATTAGTCTATTACTACTGGTAAG