lowQualScore : 2222222222222222222222222222222222222222222222222222222222222222222222222222222222 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111 11111111111111111111111111111111111111 111111111111111111111
lowQualScore : 1 88888888888888 2 111111 11 2222 1 2222222222 77777777 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 1 1 44444444 11 4444444 22 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 2 111111 66666 1 2 1 22 11 1 222 1 5555 2 2 22 222 1 1 1 1 11 222 11111111111111 22222 1 1 11 1111 1 222 1111 44444 55555 22222222222222 1 3 1 444444444444444444 111 11 1 1 111 1 11 11 1 1 444444444444 33333333333333333333333333333333333333 2222 222222222222222222222 1 11 33 1 4444444 1 2222 11 1 4444444444444444 1 2222222 111 3333333 33333333333333 1 2222 555555555555555 1 111 222222 22 1 11 111 222222222 1111 5555555555555555 5555555555555 1111 1 1 33 1 2222 999999999999999999999999999999 1 222222 111 44444444444 22222 1 22222 11 111 111 1 1 11111 222 999999999 333333 88888888888888888888888888888888 1 2 11 22222 4444 444444 333333333333333333333 333333 1 1 1 4444444444444444444 1 2222
lowQualScore : 5 88888888888888 3 6 0 666666 6 22 6 0000 3 0 3 3333333333 00000000 7 5 3 9999999999999999999999999999999999999999999999999999999999999999999999999999999999 3 0 3 8 3 88888888 6 1 22 4444444 00 1 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 6 000 0 555555 44444 7 0 7 77 6 22 6 5 6 000 5 6 6 4444 4 3 99 111 7 3 6 2 6 5 6 6 88 77 777 7 0 99 33333333333333 0 6 0 88888 7 3 6 55 0 6 7 9 8 0 5555 0 6 6 5 333 6 7777 0 6 55555 3 88888 3 6 66666666666666 8 7 1 2 8 7 4 7 8 8 8 44 8 666666666666666666 8 3 888 6 8 44 8 5 99 4 1 111 1 1 1 6 44 33 33 6 99 0 3 6 0 2 0 2 111111111111 0 22222222222222222222222222222222222222 6 0 6 9999 555555555555555555555 2 9 7 88 00 3 3333333 3 8888 44 3 0000000000000000 0 3 6666666 33 777 2222222 44444444444444 77 0 1111 2 3 0 333333333333333 33 4 0 777 1 333333 66 0 33 6 777 8 8 000000000 7777 0000000000000000 0000000000000 9999 3 6 5 55 3 2 6666 6 6 4 888888888888888888888888888888 0 1 3 8 888888 555 0 2 77777777777 55555 55 5 7 77777 66 44 0 5 444 4 6 88 99 444 1 6 7 8 0 66 3 33333 777 3 333333333 0 222222 4 55555555555555555555555555555555 9 444 5 6 6 1 0 0 33 8 8 33333 0 6 11 0000 6 1 000000 666666666666666666666 333333 5 1 9 1 3 2 6 6666666666666666666 6 6 5 9999 6 2 2 2
lowQualScore : . .............. . . . ...... . .. . .... . . . .......... ........ . . . .................................................................................. . . . . . ........ . . .. ....... .. . ............................................................................................................................... . . ... . ...... ..... . . . .. . .. . . . ... . . . .... . . .. ... . . . . . . . . .. .. ... . . .. .............. . . . ..... . . . .. . . . . . . .... . . . . ... . .... . . ..... . ..... . . .............. . . . . . . . . . . . .. . .................. . . ... . . .. . . .. . . ... . . . . .. .. .. . .. . . . . . . . ............ . ...................................... . . . .... ..................... . . . .. .. . ....... . .... .. . ................ . . ....... .. ... ....... .............. .. . .... . . . ............... .. . . ... . ...... .. . .. . ... . . ......... .... ................ ............. .... . . . .. . . .... . . . .............................. . . . . ...... ... . . ........... ..... .. . . ..... .. .. . . ... . . .. .. ... . . . . . .. . ..... ... . ......... . ...... . ................................ . ... . . . . . . .. . . ..... . . .. .... . . ...... ..................... ...... . . . . . . . ................... . . . .... . . . .
lowQualScore : 0 00000000000000 0 0 0 555555 0 00 0 0000 7 7 3 0000000000 33333333 0 5 2 3333333333333333333333333333333333333333333333333333333333333333333333333333333333 3 7 3 3 3 33333333 0 0 77 3333333 00 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 0 555 0 555555 55555 0 0 0 55 0 00 0 0 0 555 0 0 0 0000 7 3 77 000 0 3 7 0 7 0 0 0 33 77 000 0 7 33 77777777777777 7 7 7 77777 0 3 0 77 7 0 3 0 3 7 7777 7 0 0 0 333 0 7777 7 0 00000 0 33333 7 0 66666666666666 0 0 8 0 0 8 6 0 0 0 2 66 0 000000000000000000 0 2 333 0 0 44 0 2 22 2 3 777 7 0 7 0 33 88 33 5 22 7 3 7 2 8 2 5 555555555555 2 44444444444444444444444444444444444444 7 7 0 0000 333333333333333333333 0 7 3 33 77 3 3333333 3 3333 33 3 0000000000000000 0 2 0000000 22 555 0000000 22222222222222 88 0 8888 2 2 2 000000000000000 00 0 0 555 2 555555 00 0 88 0 555 0 0 888888888 0000 3333333333333333 3333333333333 0000 3 0 7 33 3 5 2222 0 0 0 222222222222222222222222222222 0 2 5 2 888888 888 2 5 55555555555 00000 22 0 8 22222 00 22 2 0 000 6 0 88 00 000 4 6 8 0 0 00 0 00000 888 0 000000000 8 666666 8 55555555555555555555555555555555 0 888 0 0 0 2 8 2 88 2 2 11111 7 0 77 0000 0 0 000000 000000000000000000000 777777 0 0 0 0 3 0 0 7777777777777777777 0 0 0 5555 0 5 5 5
consensus : TATTTAGCCCATATGCAACCTTGTTT--GTCCAANCTTTTANGTATTGAGGAAGAGGGATAAGCATGGCGTACACAGCGCAGATATTCTGTCAANCGCGGNTCTATTTT-CAACATCAAAC-ATTCNTCT-CTTGTCTCTGC---C--NNTTTTTGAGAGCTTCAAGTCCATGTG-----------A--TCCA-ANCGAA-----CTTTTCT------------------TCTTGGCAAATCA------TA------TGTGTCTGAGG-GTTG-AACATG-TGGTCT--------TAGGCTGCACACAAGTTCCATTG------TAGAGCA-GCTAACCTG--TG-TA---GTCTGAGAGTTGAACACGTGGTCTTATAAGCGCTNCAA------CACAAGTTCAA--TTGTAGAGCAGCTAACCTGTTAGAGTCCGCCTNNAGCGATCNCNNNAGANCATTAGAACTGGTTCAATNNNTTCACATATGCCGNTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGTC-TCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCAA--AGTACCCTCAACTTCCACAATAAACACTAGGAAAG------T----AAATCAGACCAGAATAAAT-AGCTGAGAAAGTAACTGCT-CAAGGCATGGCATTCTTTCCGAAACGTCAGGATGATGGTATCACGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCTTGNAGACNTTCTCATAGCCAGGC--GGGGGNGGGGGGGTTACCCA---CAGC-CTTGA-AATTCATGGAGGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT--GAAGGGAACTT-NG--GGT-CCAAAAA---CTGCAGAAA-AGGTGA-TGGCTGGAAA--GTCGTACGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAATT-TCATGACTGAAAAGAATCCTGACCTGAAGAAAGAATTNCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCGTGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT--GGTGGGA-ATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAGAG-ATGGTCTCCG-GAACCTTCAT--CTN---CAT-----ATGT-TTCAGTGC--A----TGCCG---CCAT-A-----TTTCACGAGAT---A----CAACNGGATCAA-CTACG--CTCGCTGGGGGAC-A----------TT-TATCTTNG-TG---AAATGTA-C--ACAGTTGCCA-GAGGC--AGTCAA---ACAG-GAGTTT-GA--AGC-T--GGTAAC---TTTGTGGTCAAGCG----CTCCGC-CATCGCTTCAATTAGGTGTCCC--TATTT-N-CTCAA-AGTGGA-TCAATGGTCTTGGCA-AAAA-GGAGAAGGCGTCATTGGAATCGCATGGACCGCGTC---AGCCCTTNGCAGGTGGACACTGT--------CT--T-------CG-----GTCCCACC-TCGCTAGGGAAACAAGGATATCCTNTGGTCTTGGATCTGGTGATGA------CAGGATCCACG--ACGAGACCANC-----------AAAGGC-----AGAAATAAAATTGATNTGCGAGATGAAGATNC----ACTGCTGTCTG-TTCTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCAGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGCT-GC-AAAANAGGGACGAGATCAGCTGGATGAAT--T--TTTTNAGGAGACTACTGCCGCGTGAGGAGAG-AAAATTGCTTTC-AGGGACACCCTGCCAAAGAA-------------CAA-AT-------------ATTTGACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAGTAAA-CATAGTCAAGGCAGATAGAAA-CATCCCGCAACGCCTCATTGC-----TGCATATGAAGC-TGGAA--CCAG--------TCAA---TC-TCAATAACATTCCGATTCATGAACTGTTTGTGGCACCTTT-AGCCCTTGCAGAGGTGAATGG--AG-TG-GGACAGG---CAAAGGCAGTCCTTGCTGAGGTCTTGACTGCTGATGTNTCTTGTNCTGACCACNTGGATNCAACAG
Reference ( gi|1 ) : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGC--TT--TTTTTTTTAGAGCTTCAAGTACATGTG-----------A--TCAA-ATTGAA-----CTTTTCT------------------TCTT---------------TA------TGTGTCTGAGG-GCTG-AACTTG-TGGTCT--------TAGGCTGTATACAGCTTCCATTG------CAGAGCA-CCTAACTT---T--TA---GTCTGA------AACACG-------A-AAGAAC-ACAA------CACTGGTCCAANATTGCAGAGCACCTAACTT-TTAG-------CTTGAA-A--CACGAAAGAACAC-AACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGTC-TCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTAA--AGTACCACCGGGTTCAACAACAAACATAAGGAAAAAGTGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGCT-CAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAGTCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCAAACTACT---AAGACTTTCTCATAGCCACCCGGGGGGGGGGGGGGGCTACCCA---GAGC-CT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-AGAAGGGAACTG-GG--GGT-CCAAAAA---CTACAGAAA-AGACGA-TGGCTGTGAA--GTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACGAAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATTTTGGTGGGA-ATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAGAA-ATGGTCTCTG-GAACCTTCAT--CTA---CAT-----ATGT-TTCAGTGC--A----TGCTG---CCAT-A-----TTTCATGAGAT---A----CAAGTAGATCAA-CTATT--CTTGCTGGGGGAC-A----------TT-TATTTTAG-TG---AAATGTA-C--ACAGTT-TCA-GAGGC--AGCCAA---ACAG-GAGTTT-GA--CGC-T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTCCCCCTACTT-G-CTCAAGAGGGGA-TCAGTTGTCTTGGCACCAAA-GGAGAAGGCATCATTGGAATCACATGAACGGCGTG---AGTCTTTTGCAGATGAACAC-----------CT--T-------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGATAA------CAGGATCCACG--ACGAGACCACC-----------AAAGGC-----AAAAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTG-CTCTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGCT-GC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--T--TTATGAGGAAACTACTGCCACGT---------AAAATTGCTTTT-TGAAACACCCTGCCAAAAAA-------------GAA-AT-------------ATTTGAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAAA-C--CCTGTAATGCCTCATTGC-----TGCATATGAAGG-TG--------G--------TCAA---TT-TCAAGAACATTCTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAATGGGTAGCTGCGGACAGGAA-CAAAGGCAGTCCTTACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AGTTTT-AGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAATT--GGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGC--ACAGCCTTTTTGAGAGCTTCAAACTCATGTGAACCACACCTTA--TCAA-GT--AATCATTCTTTTCT------------------TCTTGGCAAATCA------TATCATTCTGTGCTTGGGG-GCTG-AACTTG-TGGTCT--------AAGGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTACATG-TA---GTCTGA------AACACG-------A-AAGCGCTCCAA------CATCGTTCGAACA
gi|3 : caGTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGCT--TTTGTTTGAGAGCTTCAAGTCC-TGTG-----------AAATCCA-CACGAA-----CTTTTCTGTCCTTAACAAAATCATATCTT---------------TA------TGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCA-GCTAACCTG--T--TA---G
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGC------AGTTTTTTAGAGCTTCAAATCCATGTG-----------A--TGTA-AGTAAA-----CTagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|7 : aAGAGCTTCAAGTCCATGTG-----------A--TCCACACCGAA-----CTTTTCT------------------TCTTAACAAATCATATCTTTA------TGTGTCTGAGA-GTTG-AACATG-TGGTCT--------TAGGCTGCACACAAGTTCCATTG------TAGAGCA-GCTAACCT---TGNTATGTGTCTGAGAGTTGAACATGTGGTCTTATAAG--C-ATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCT-T--G-------TTAGAGCG--CTCCAAA-ATCATTAGAACTGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAG
gi|3 : A------CACAAGTTCAA--TTGTAGAGCAGCTAACCTGTTAGAGTCCGCCTCCAA-AATCATATTAGAAC--------TG-TTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|7 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGTC-TCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCAA--AGTACCCTCAACTTCCACAATAAACACTAGGA--------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGTT-CAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaGGGAACATGATGAT-TAAAGACTTAAAAACCTTC--AGAGAGGATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTTC-AGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAAA------T------ACCAGAT--GAATAAG----CTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTGAA-CGTCAGGATGATGGTATCATTAAGGCGG-CTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGg
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaAAA-CCTTCAGAGAG-GAATGTCTTCATGTC-TCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCAA--AGTACCACCAACTTCAACAACAAACATAAGGAAAGAAAGGTTCAAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGCT-CAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|6 : CAAATTACC---TAGACTTTCTCATAGTCAGGCTTGGGGGAGGGGTGGCTACCCA---CAAC-CTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT--GAAGGGAACTT-GG--TGCGTCATAAA---CTGCAGAAA-AGGTGA-TGGCTAGAAG--GTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAGAAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGA-CCCATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACATT---GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATA----ATGT-TTCAGTGC--AGAGTTG--G---CCATCACTGGTTCTCATGAGATGACA----CAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTT-GATTCTTG-TGAAAAAAGGTA-CAAACAGTTACCA-GAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|3 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaCAAATTACCTTGAAGACGTTCTCATAGCCA-----GGCTGTGTGGATGT---------GAG---T-GACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAATT-TCAG-ATTACAGGAAACATGGTGTT--GAAGGAAACTACTG--GGT-CCAACAA---CTGCAGAAA-TG-TTA-TGGCTGTGAA--GTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|2 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcGGGGGGGGGGGGGAGCTACCGA---CAGT-CTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT--GAAGGGATTTT-GGTTGGT-CCAAAAAAAACTGCAGAAT-AGGTGA-TAGCTGGAAA--GTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAGAAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAAC----GCCT--------------G-CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATTT-GGTGGGG-GTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAGAG-ATGGTCTCTG-GAACCTTCAT--CTC---CGT-----ATGT-GTCAGTGC--A----TGCCG---TTAT-A-----TTTCATGAGAT---A----CAACTGGGTCAA-CTATG--CTTAC-GGGGGAC-A----------TT-TATCTTAG-TG---AAATGTA-C--ACAGTT-CCA-GAGGC--AGTCAA---ACAG-GAGTTT-GA--AGC-T--GGTGTC---TTTGTGGTCAAGTG----C----------GCTTCAATTAGTTGTCCC--TATTTCG-CTCAATAGTGGA-TCAATGGTCTTGGCAAAAAA-TAAGAAGGGATCATTGCAATTACATGAACGGCGTC---ATCCCTTTGCAGATGGACAC-----------CT--G-------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGATGA------TAGGATCTACA--ACGAGATCAAC-----------AAAGGC-----AGAAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGCT-GC-AAAGTAGGGAAATGATCAGCTGAATGAAT--T--TT---AGGAGACTACTGCCGCGT---------AAAATTGCTTTC-AGAAACACCCTGCCAAAGAA-------------CAA-AT-------------ATTTGGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAAA-CATCCTGCAATGCCTCATTGC-----TGCATAAGAAGC-TGGAACACCAG--------TCAA---CC-TCAACAGCATTCCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATTGGTAGATGCGGACAGGAT-CAAAGGCAGTCCTTGCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGctta
gi|15 : ggggggggggggggggggggGGAGGTTTACATA---CAGCACT-GA-GCTTCTTGAAGGTCA-TTGGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTCGAGAGCAGCACAT-TA--GGC-CCCAAAA---CTGCGGAatatcaaagacctgctacttattgatggacacacact
gi|4 : cttcctgatagtgagacttGGGGTAACTCAAAAGAGC-CTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT-TGCA----------G--GAT-CC-AAAA---CTGCAGAAA-AGGCGA-TGGCTGGAAA--GTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAgcatgtcctgttgggcaagtcctatga
gi|12 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctAAAAAT--CTGCAGAGAGAGAGTACTGGCTG-GAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTT---GAAACAGAAAATTGAGGAGGCA-----------GACgaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|7 : ataactaccgtatatattatctttaaatcaattggcaaacactttgaatcaacagtcctgctagaattatggactgacagttatttgcttggcaaAA--ATCAGACCAGAATG-AATA---AG--CTGAGAAAGTAACTGTTCAAGGCATG----G-CATTCTT
gi|4 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaGAATAGAATCCTGGCCTGA-------------AGAGAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGTGGTGGGA-ATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAGAG-ATGGTCTCCG-AAAACTTCAT--TTC---AAT-----GCGT-TTCAGTGC--A----TGCTG---CCAT-A-----TTTCACGAAAT---tctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|11 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgagga--CTA---CATCTTGCATGCATTCAG-GCTGA----TGCTGGGCCTTT-C-----TTTCATGAGGT---ATTTACCACTTG--CAA-TTTTG--CTCGATGGGGTAC-A----------GAATACCTCAGGTG---AGATGAA-T---CAGCTGCCATGAAGC--TGTGCA---ACAA--AGTTT-GA--CGA-G--GACAAT---ATCGT-GTCAAG
gi|5 : TTCACGAAAT---A----CATCAAGACCAA-CTACC--CTCGCTGGAGGACCA----------TC-TATCGTTG-TG---AAATGCATC--A-AGTT-CCA-AAGGC--AGTCAA---ACAG-GTGTTT-GA--AGC-T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC-----ACAT-A--TCAA---GTGATTCAATAGTATTGGAATAAAA-GGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGT--------CT--TTAACCTGCG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGAAGA------CAGGATCCACA--ACGAAACCACC-----------CAAGGC-----AAAACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGCT-AC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGGGAGGAAAATTGC-TTC-AGGGACA-CCTGCCAAAGAA-------------CAG-AT-------------ATTTGACC---TCGTCATTGT-TACAGTCAA--GTGGGAAGACGGT----CACAGTCAAGGCAGACATAAA-CATCTTGCAACACCTCATTGCTGCAGTGCATATGAAGC-TGGAAACCCAG--------TCAA---TT-TCAATAATATTCTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAATG-----------------------GACAGTCCTTGCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAGagattcagagaacaagtttaaaccagggtggaatccttatcagagccaggaagatggaatggccaggcaaagagtggtgcgatcgttgcatctcaaagacatcatcagcttgagcaggtgggctctctccttc
gi|8 : AG-GAGTTA-GA--AGA-T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCCTATTT-TTCTGAAGAGTGAA-TCTATGGTCTTGGCA--AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGTC---AGCCCTTTGTAGATGGACGC-----------CT--T-------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGATGA------CAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTG-TTCTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAGatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|14 : GGACCGCGTC---AGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCT-------CGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGC-----AGAAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTG-CTCTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGG
gi|13 : aaGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------CT-GCAAAAAAAGGGACGAGATCAGGTGGATGAAT--T--TT-TTAGGAGACTACTCCCACATGAGGAGAGAAAAATTGCTTTC-AAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGAa
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--T--TTTTGAGGAGACTACTGCCACGT---------AAAATTGCTTTC-AG-AACACGCTGCCAAACAA-------------tc
gi|20 : CTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGACT-Gtg
gi|10 : cgcGATTAACTGAATGAGTGGT--GTTTTAAAAAACTACTGTCACATGAGAAGGA-AAAATTGCTCTCATGA--CACCTTGC--AGAGA-------------CAA-AT-------------ATTCGACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAAAAC--CCCGCAACGCCTCACTG------TGCATATAAAAGCTG--------GAAGACCAGTCAAACCTCATCAATAACATTCTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGACTGGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTt
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111 111111111111111111
lowQualScore : 2222 11 2 11 1 222 11 33333333 1 11 11 33333333333333333333 11 6666666666666666666666666666666 1 1 1 33333333 222222 1 444444444 3333333 1 666666666666666666 1 11 22 333333333333333333333333333 2 11 2 33 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 1 1 1 11 000000000000000000000 3333 1 11 111 1 3333 111 111 111 1 33333333333333333333 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 22222 3333333 1 2222 1 1 222222 2222 2222222 111 1 11111 444444444444 111 1 11 3 11 111 111111 111 44444444444 11 22 4444444444 111 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 66666666666 444444444444 555555555555555 11 11111 222222 1 33333 222222 1 1 000000000000000000 1
lowQualScore : 3 9999 33 11 3 7 0 7 0 0 33 1 0 666 3 1 00 66666666 0 00 0 11 44444444444444444444 33 1111111111111111111111111111111 0 0 4 0 66666666 2 888888 0 000000000 9999999 0 333333333333333333 44 5 88 00 888888888888888888888888888 7 6 333 3 0 1 7 88 3 00 7 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3 0 3 0 2 6 2 2 33 2 2 4 000000000000000000000 2 1111 0 0 2 3 1 4 11 777 0 5555 1 444 666 1 99 1 2 66 2 111 3 2 6 5 5 22 0 1 5 1 5 00000000000000000000 000 5 5 5 7 3 1 111 1 6 6 77 3 0 2 8 3 3 3333 00000000000000000000000000000000000000 7 2 7 0 2222 0 1 0 3 33 88888 2222222 0 1111 0 2 0 0 1 888888 1111 66 6666666 444 1 0 55555 3 444444444444 0 1 777 0 33 2 1 33 777 8 8 666666 444 2 33333333333 3 33 33 1111111111 0 777 0 2 2 5 444 1 11111111111111111111111 8 4 1 333333 11 1 88888888888 00000 1 1 7777 1 1 8 2 111 0 6 111 6 1 8 5 99 3 9 99 0 55555555555 666 111111111111 000000000000000 8 11 00000 666 2 777777 0 2 88888 000000 0 2 1 0 2 0 444444444444444444 0 1 1 1 0 11
lowQualScore : . .... .. .. . . . . . . .. . . ... . . .. ........ . .. . .. .................... .. ............................... . . . . ........ . ...... . ......... ....... . .................. .. . .. .. ........................... . . ... . . . . .. . .. . ................................................................................................................................................. . . . . . . . . .. . . . ..................... . .... . . . . . . .. ... . .... . ... ... . .. . . .. . ... . . . . . .. . . . . . .................... ... . . . . . . ... . . . .. . . . . . . .... ...................................... . . . . .... . . . . .. ..... ....... . .... . . . . . ...... .... .. ....... ... . . ..... . ............ . . ... . .. . . .. ... . . ...... ... . ........... . .. .. .......... . ... . . . . ... . ....................... . . . ...... .. . ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... ... ............ ............... . .. ..... ... . ...... . . ..... ...... . . . . . . .................. . . . . . ..
lowQualScore : 0 0000 00 77 7 3 7 3 7 7 00 0 0 222 2 0 88 00000000 0 55 8 00 66666666666666666666 88 5555555555555555555555555555555 0 0 0 0 22222222 5 888888 0 222222222 0000000 0 222222222222222222 22 5 33 00 000000000000000000000000000 3 7 000 7 7 0 3 33 3 33 3 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 5 5 0 888888888888888888888 5 0000 0 2 0 2 2 0 22 555 0 0000 0 000 000 0 22 0 5 22 5 777 2 2 6 7 7 44 7 9 7 4 7 00000000000000000000 000 7 7 7 6 7 3 777 7 0 7 77 2 0 5 0 8 2 2222 00000000000000000000000000000000000000 0 0 0 2 8888 0 0 2 2 88 55555 5555555 0 2222 0 0 0 2 0 888888 2222 88 0000000 000 0 0 55555 2 888888888888 8 0 555 0 88 5 5 88 555 0 0 000000 000 0 88888888888 5 88 88 5555555555 2 000 0 0 0 0 000 0 88888888888888888888888 0 6 0 000000 00 0 00000000000 00000 0 0 0000 0 8 0 5 777 3 7 777 7 0 0 0 22 5 8 22 7 88888888888 888 000000000000 000000000000000 0 00 44444 555 0 555555 0 5 22222 222222 8 0 2 0 5 0 555555555555555555 0 0 0 0 7 77
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTG-TTTTCAACATCAAA-C-ATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTN-AGAGCTTCAAGTCCATGTG--ATCCAC-----ANCGAA--------CTTTTC--TTCTTAAC-AAATCA------TA------T------GTGTCTGAGG-GCTG-AACNTG-TGGTCT--------TAGGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAGCATAAGCTGCAACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAG--CGCCTC-A---ATCAC--AAGA-CATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G------T-A------AAACCAGACCAGAATGAATCAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGCCA---GGC--GGGGGNGG--GGGGGCTACCCACA---GCCTTGAAATTCATGGAAGTCANTGGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TGG--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACAT--TT-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-ATN-CTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCA-A-AAAG-GAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGCAAAATA-GGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--GGAG-G-AAAATTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTC-A--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAAACATCCTGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGAA-A--CCAGTCAA---TC-TCAATAACATTCTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-TGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCAACCTTGTTT--GTCCAANCTTTTANGTATTGAGGAAGAGGGATAAGCATGGCGTACACAGCGCAGATATTCTGTCAANCGCGGNTCTA-TTTTCAACATCAAA-C-ATTCNTCT-CTTGTCTCTGC--C--NNTT-TTTG-AGAGCTTCAAGTCCATGTG--ATCCA------ANCGAA--------CTTTTC--TTCTTGGC-AAATCA------TA------T------GTGTCTGAGG-GTTG-AACATG-TGGTCT--------TAGGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCT----GTGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAGC----GCTNCAACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAGTCCGCCTNNAGCGATCNCNNNAGANCATTAGAACTGGTTCAATNNNTTCACATATGCCGNTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGAAA--G------T--------AAATCAGACCAGAATAAAT-AGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCTTTCCGAAACGTCAGGATGATGGTATCACGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGATAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCTTGNAGACNTTCTCATAGCCA---GGC--GGGGGNGG--GGGGGTTACCCACA---GCCTTGAAATTCATGGAGGTCANTGGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TNG--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTACGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAATT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTNCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCGTGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACAT--T--GGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCCG-GAACCTTCATCTNCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-ACG-CTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTTGCCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGCG----CTCCGC-CATCGCTTCAATTAGGTGTC--CC--TATTT-N-CTCAA-AGTGGATCAATGGTCTTGGCA-A-AAAG-GAGAAGGCGTCATTGGAATCGCATGGACCGCGT---CAGCCCTTNGCAGGTGGACACTGTCTT----------CG-----GTCCCACC-TCGCTAGGGAAACAAGGATATCCTNTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCANC-----------AAAGGCAG-----AAATAAAATTGATNTGCGAGATGAAGATNC----ACTGCTGTCTGTT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCAGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGCAAAANA-GGGACGAGATCAGCTGGATGAAT--TTTTTNAGGAGA--CTACTGCCGCGTGA--GGAGAG-AAAATTGCTTTCAGGGACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTC-A--GCTGTCAGACAGTAAA-CATAGTCAAGGCAGATAGAAACATCCCGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGA--A--CCAGTCAA---TC-TCAATAACATTCCGATTCATGAACTGTTTGTGGCACCTTT-AGCCCTTGCAGAGGTGAA-TGG--AG-TG-GGACAGG---CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTNTCTTGTNCTGACCACNTGGATNCAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTG-TTTTCAACATCAAA-CCATTCGTCC-CTTGTCTCTGC--T--TTTT-TTTTTAGAGCTTCAAGTACATGTG--ATCAA------ATTGAA--------CTTTTC--TTCTT----------------TA------T------GTGTCTGAGG-GCTG-AACTTG-TGGTCT--------TAGGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGA----AC-ACAACACTGGTCCAANATTGCAGAGCACCTAACTT--TTAG-------CTTGA---AACACGAAAGAACAC-AACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTACT---AAGACTTTCTCATAGCCACCCGG---GGGGGGGG--GGGGGCTACCCAGA---GCCT-GAAATACATGGAAGTCA-TGGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GGG--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACAT--TTTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-ATT-CTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCA-CCAAAG-GAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGCAAAGTA-GGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAATTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTC-A--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAAAC--CCTGTAATGCCTCATTGC-----TGCATAT-GAAGGTG----------GTCAA---TT-TCAAGAACATTCTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGTAGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--GAAGGA-AAAATTGCTCTCATG-ACACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTT-ATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAAA-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAAGA--CCAGTCAAACCTCATCAATAACATTCTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-TGGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : ATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TGG-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttaaatcaGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGACCTG-----------CAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAATTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTC-A--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaG--GAGGTTTACATACA---GCACTGAGCTTCTTGAAGGTCATTGGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TTA--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : cttcctgatagtgagacttTCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGCAAAATA-GGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAATTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTG-TTTTCAACATCAAACC-ATTCTTCT-CTTGTCTGTG---C--AGTT-TTTT-AGAGCTTCAAATCCATGTG--ATGTA------AGTAAA--------CTtg
gi|2 : a---GGG--GGGGGGGG--GGGAGCTACCGACA---GTCTTGAAATTCATGCAAGTCACTGGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TGGTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACAT--TT-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-ATG-CTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCA-A-AAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGCAAAGTA-GGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAATTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTC-A--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAAACATCCTGCAATGCCTCATTGC-----TGCATAA-GAAGCTGGAACA--CCAGTCAA---CC-TCAACAGCATTCCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATTGGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAG
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAA-A-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTG-AGAGCTTCAAGTCC-TGTGAAATCCA------CACGAA--------CTTTTCTGTCCTTAACAAAATCATATCTTTA------T------GTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCA-CACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAGTCCGCCTCCAA-AATCAT--------ATTAGAACTG-TTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A------T----------ACCAGAT--GAATA----AGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC--TGTG-TGGATGTGAGTGAC---------------AATTCATGGAGGTCACTGGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACTG--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTCAAG----AAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA----------ACTCAAAAGAGCCTTGAAATTCATGGAAGTTAATGGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTTTGC-AGG--A---------------T-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAA-AAAAGAACTTCATATTGT--GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-ACC-CTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TATC--------A-AGTGATTCAATAGTATTGGAATA-AAAG-GAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TACAAAAAA-GGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGGGAG-G-AAAATTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCAA--GTGGGAAGACGGT----CACAGTCAAGGCAGACATAAACATCTTGCAACACCTCATTGCTGCAGTGCATAT-GAAGCTGGA--AACCCAGTCAA---TT-TCAATAATATTCTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-TGG--A---------------------CAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT---AGACTTTCTCATAGTCA---GGCTTGGGGGAGG--GGTGGCTACCCACA---ACCTTGAAATTCATGGACGTCAATGGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TGG--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACAT--T--GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaaga-AGAGCTTCAAGTCCATGTG--ATCCAC-----ACCGAA--------CTTTTC--TTCTTAAC-AAATCA------TA------TCTTTATGTGTCTGAGA-GTTG-AACATG-TGGTCT--------TAGGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAGCATAAGCTGCA-CACAAGTTCAA--TTGTAGAGCAGCTAACCTTGTTAGAG--CGC---------TCC---AAAATCATTAGAACTGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA--------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-A-AATG-GAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAAT--TGGATCTA-TTTTCAATATCAAA-CAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTG-AGAGCTTCAAACTCATGTG--AACCACACCTTATCAAGTAATCATTCTTTTC--TTCTTGGC-AAATCA------TATCATTCT------GTGCTTGGGG-GCTG-AACTTG-TGGTCT--------AAGGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG--------A-AAGC----GCTCCAACA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 3 11 2222 1 11 444444444444444444 11 1111 555555555555555555555 1 1 1 33333333 222222 1 333333333 3333333 1 222 2 11 22 88888888888888888888888888 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 999999999999999 1 111 1 11 111 1111 111 22222222222222222222222 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 1111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11111 1 22222 2 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 44444444 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 0 3 0 00 4444 0 77 0 11 2 444444444444444444 33 4444 999999999999999999999 0 0 1 0 66666666 1 888888 0 444444444 9999999 0 444 7 7 3 88 00 88888888888888888888888888 7 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 3 444444444444444 3 2 0 0 3 1 1 99 777 0 6 88 7 111 8888 33 1 1 5 22 2 111 1 6 6 5 5 5 6 44 5 5 5 11111111111111111111111 000 6666 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 4444 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 77777 0 22222 3 0 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 22222222 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . .................. .. .... ..................... . . . . ........ . ...... . ......... ....... . ... . . . .. .. .......................... . . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . . ............... . . . . . . . .. ... . . .. . ... .... .. . . . .. . ... . . . . . . . .. . . . ....................... ... .... . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. .... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . ..... . ..... . . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ........ ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 0 2 2 88 0000 0 88 8 00 5 222222222222222222 88 0000 222222222222222222222 0 0 0 0 22222222 0 888888 0 444444444 0000000 0 333 3 3 7 33 00 33333333333333333333333333 3 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 2 000000000000000 2 5 0 2 2 2 0 88 555 0 7 33 3 777 3333 55 0 0 2 00 5 777 0 7 6 7 7 7 6 99 7 7 7 44444444444444444444444 000 6666 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2222 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 55555 0 88888 2 2 0 0 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 88888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTG-TTTTCAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTG--ATCCACACC-------G-AA-----CTTTTC--TTCTTAAC-AAATCA------TA------T------GTGTCTGAGG-GCTG-AACNTG-TGGTCT--------TAGGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAGCATAAGCTGCA-CACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAG--CGCTTC---AA-C-----AGA-CATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--GTAA--C--GA--AACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGT--C--CC-TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCACAAAAG-GAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGAAG-----A-CCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTG-TTTTCAACATCAAAC-ATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTNAGAGCTTCAAGTCCATGTG--ATCCACANC-------G-AA-----CTTTTC--TTCTTAAC-AAATCA------TA------T------GTGTCTGAGG-GCTG-AACNTG-TGGTCT--------TAGGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAGCATAAGCTGCAACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAG--CGCCTC---AATCAC--AAGA-CATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--GTAA---------AACCAGACCAGAATGAATCAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGCCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGT--C--CC-TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCA-AAAAG-GAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGAA------A-CCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTG-TTTTCAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTG--ATCAA-ATT-------G-AA-----CTTTTC--TTCTT----------------TA------T------GTGTCTGAGG-GCTG-AACTTG-TGGTCT--------TAGGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACA-----CAACACTGGTCCAANATTGCAGAGCACCTAACTT--TTAG------CTTG---AAACACGAAAGAACAC-AACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAGTGATTCAAGA--AACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT--GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATTT-TGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTCCC--CC-TACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAG-GAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTT--CAGCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATAT-GAAGGTG--------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAAG-----A-CCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT--TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTT--CAGTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA--TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTG-TTTTCAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTG--ATtg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT--TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGT--C--CC-TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCA-AAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAA-GAAGCTGGAAC-----A-CCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACA-C-------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTA------T------GTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCA-CACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAGTCCGCCTCCAAAATC-------A-TATTAGAACT-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACAT-GAAACAGGAAGTGGTGA-CCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--AT------------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC--TGTG-TGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAATT-TCAG-ATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACTG--G--G-T-CCAACAA---CTGCAGAAA--T-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTCAAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT-------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATA-TTGTGGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGT--C--ACATAT-------CAAG--TGATTCAATAGTATTGGAATAAAAG-GAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--T--CAA--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATAT-GAAGCTGGAA------ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA--T-TGAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTG--ATCCACACC-------G-AA-----CTTTTC--TTCTTAAC-AAATCA------TA------TCTTTATGTGTCTGAGA-GTTG-AACATG-TGGTCT--------TAGGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAGCATAAGCTGCA-CACAAGTTCAA--TTGTAGAGCAGCTAACCTTGTTAGAG--CGCTCC---AA-------AAT-CATTAGAACTGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGG-------AA---------AATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGT--CTCCC-TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATG-GAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTA-TTTTCAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTG--AACCACACCTTATCAAGTAATCATTCTTTTC--TTCTTGGC-AAATCA------TATCATTCT------GTGCTTGGGG-GCTG-AACTTG-TGGTCT--------AAGGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 7777777777777 1 1 1 33333333 222222 1 333333333 3333333 1 222 11 11 1 7777777777777777777777777 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 999999999999999999 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 7777777777777 0 0 1 0 66666666 1 888888 0 444444444 9999999 0 444 7 88 6 88 3 6 2222222222222222222222222 7 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 999999999999999999 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 2 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . ............. . . . . ........ . ...... . ......... ....... . ... . .. . .. . . ......................... . . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . .................. . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 2222222222222 0 0 0 0 22222222 0 888888 0 444444444 0000000 0 333 3 33 7 33 3 7 3333333333333333333333333 3 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 000000000000000000 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATA------TCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAG--CGCTT------CGAAAA--A-CATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--GTGA----C----GAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATA------T------GTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAG--CGCTT------CAACAG--A-CATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--GTAA----C----GAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCACAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------TA------T------GTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGCAGAGCACCTAACT-T-TTAG------CTTGAAACACGAAAG--AACAC-AACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAGTGA----TTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATA------TCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAGTCCGCCT------CCAAAATCA-TATTAGAACT-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--AT--------------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTCAA--GAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATA------TCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCTTGTTAGAG--CGCTC------CAA-AA--T-CATTAGAACTGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCT------GTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 3333333 1 222 11 11 1 44444444444444444 2222 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 99999999999999999999 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 444444444 9999999 0 444 7 88 6 88 3 6 66666666666666666 2222 7 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 44444444444444444444 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ....... . ... . .. . .. . . ................. .... . . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . .................... . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 444444444 0000000 0 333 3 33 7 33 3 7 00000000000000000 7777 3 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 55555555555555555555 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAG--CGCTT------C-AAA-A--ACATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G------T-A-----GAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAG--CGCTT------CGAAA-A--ACATTAGAACTGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G------TGAC----GAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGCAGAGCACCTAACT-T-TTAG------CTTGAAACACGAAAGA--ACAC-AACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACC-TGTTAGAGTCCGCCT------CCAAA-ATCATATTAGAACT-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTCAA----GAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCTTGTTAGAG--CGCTC------C-AAA-A--TCATTAGAACTGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA--------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 3333333 1 222 11 11 22 3333333 11 4444444 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 99999999999999999999 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 444444444 9999999 0 444 7 88 6 88 00 4444444 1 88 3333333 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 88888888888888888888 0 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ....... . ... . .. . .. .. ....... . .. ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . .................... . . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 444444444 0000000 0 333 3 33 7 33 00 0000000 0 33 3333333 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 00000000000000000000 2 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAG--CG-CTCCAAAA--ACGTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G------T-A----AGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAG--CG-CTTCAAAA--ACATTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G------T------AGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGCAGAGCACCTAACTT--TTAG-------CTTGAAAC--ACGAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCT-GTTAGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTCA----AGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGTAGAGCAGCTAACCTTGTTAGAG--CG-CTCCAAAA--TCATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A------T------------CAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 222222 111 111 111 11 222222 1 2222 5555555555555555555555555 111 3333333 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 888888888888888888888 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 666666666 555555 8 333 555 666 0 2 2 33 888888 0 1111 0 2222222222222222222222222 777 2222222 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 777777777777777777777 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ...... . ... ... ... . . . .. ...... . .... . ......................... ... ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . ..................... . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 000000000 888888 0 555 555 222 8 5 5 88 888888 0 2222 2 8888888888888888888888888 888 5555555 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 222222222222222222222 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAA--NCGTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAA--ACGTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGC------AGAGCACC-TA----ACTT--T--T----------AG-------CTTGAAAC--ACGAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG-------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A-------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTC-----AAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCTTGT--T----------AGAG--CG-CTCCAAAA--TCATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA---------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
gi|9 : caTGT-GCTTGGG-GGCTGAA-CTTGT-GGTCT---AAG-------GCTTCATACAGTTTCCA--TTGTAGATCTAGAGCAGCTTAAATTACAT-GTAGTCTGAAACACGAAAG--CG-CTCCAACA--TCGTTCGAAC-------aaagcgctccaacatcgttcgaaca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 222222 111 111 111 11 222222 1 2222 5555555555555555555555555 11 3333333 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 888888888888888888888 1 111 1 11 111 1111 111 22222222222222222222222 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 1111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11111 1 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 666666666 555555 8 333 555 666 0 2 2 33 888888 0 1111 0 2222222222222222222222222 1 33 2222222 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 777777777777777777777 3 1 0 0 3 1 1 99 777 0 6 88 7 111 8888 33 1 1 5 22 2 111 1 6 6 5 5 5 6 44 5 5 5 11111111111111111111111 000 6666 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 4444 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 77777 0 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ...... . ... ... ... . . . .. ...... . .... . ......................... . .. ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . ..................... . . . . . . . .. ... . . .. . ... .... .. . . . .. . ... . . . . . . . .. . . . ....................... ... .... . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. .... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . ..... . ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 000000000 888888 0 555 555 222 8 5 5 88 888888 0 2222 2 8888888888888888888888888 0 88 5555555 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 222222222222222222222 2 0 0 2 2 2 0 88 555 0 7 33 3 777 3333 55 0 0 2 00 5 777 0 7 6 7 7 7 6 99 7 7 7 44444444444444444444444 000 6666 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2222 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 55555 0 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGT--C--CC-TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAANC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGT--C--CC-TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGC------AGAGCACC-TA----ACTT--T--T----------AG-------CTTGAAACAC--GAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG-------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT--GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATTT-TGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTCCC--CC-TACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT--TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA--TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT--TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACA-TT-TGGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGT--C--CC-TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A-------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC--TGTG-TGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAATT-TCAG-ATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACTG--G--G-T-CCAACAA---CTGCAGAAA--T-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTC-----AAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT-------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATA-TTGTGGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGT--C--ACATAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT--TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA--T-TGAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCTTGT--T----------AGAG--CG-CTCCAAAATC--ATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA---------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGT--CTCCC-TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
gi|9 : caTGT-GCTTGGG-GGCTGAA-CTTGT-GGTCT---AAG-------GCTTCATACAGTTTCCA--TTGTAGATCTAGAGCAGCTTAAATTACAT-GTAGTCTGAAACACGAAAG--CG-CTCCAACATC--GTTCGAAC-------aaagcgctccaacatcgttcgaaca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 222222 111 111 111 11 222222 1 2222 5555555555555555555555555 11 3333333 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 888888888888888888888 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 666666666 555555 8 333 555 666 0 2 2 33 888888 0 1111 0 2222222222222222222222222 33 2222222 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 777777777777777777777 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ...... . ... ... ... . . . .. ...... . .... . ......................... .. ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . ..................... . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 000000000 888888 0 555 555 222 8 5 5 88 888888 0 2222 2 8888888888888888888888888 88 5555555 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 222222222222222222222 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGC------AGAGCACC-TA----ACTT--T--T----------AG-------CTTGAAACAC--GAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG-------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A-------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTC-----AAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCTTGT--T----------AGAG--CG-CTCCAAAATC--ATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA---------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
gi|9 : caTGT-GCTTGGG-GGCTGAA-CTTGT-GGTCT---AAG-------GCTTCATACAGTTTCCA--TTGTAGATCTAGAGCAGCTTAAATTACAT-GTAGTCTGAAACACGAAAG--CG-CTCCAACATC--GTTCGAAC-------aaagcgctccaacatcgttcgaaca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 333333333 222222 111 111 111 11 222222 1 2222 5555555555555555555555555 11 3333333 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 888888888888888888888 1 111 1 11 111 2222 111 1111111111111111111111 222 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 666666666 555555 8 333 555 666 0 2 2 33 888888 0 1111 0 2222222222222222222222222 33 2222222 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 777777777777777777777 3 1 0 0 3 1 1 99 777 0 6 88 7 111 2222 1 1 1 5 22 2 111 1 6 6 5 5 5 22 0 1 5 5 5 7777777777777777777777 000 5 5 5 7 1 111 1 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 3333333 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . ......... ...... . ... ... ... . . . .. ...... . .... . ......................... .. ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . ..................... . . . . . . . .. ... . . .. . ... .... . . . . .. . ... . . . . . . .. . . . . . ...................... ... . . . . . ... . . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 000000000 888888 0 555 555 222 8 5 5 88 888888 0 2222 2 8888888888888888888888888 88 5555555 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 222222222222222222222 2 0 0 2 2 2 0 88 555 0 7 33 3 777 5555 0 0 0 2 00 5 777 0 7 6 7 7 7 44 7 9 7 7 7 9999999999999999999999 000 7 7 7 6 3 777 7 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 8888888 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT-----T-TAGTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTGC------AGAGCACC-TA----ACTT--T--T----------AG-------CTTGAAACAC--GAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG-------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGG--GA---ACT-GG--G--GGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATG---AGAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTTCA--GCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATATGAA-GGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGT--TATTTGCT-TG--G-------CAAAAAAATCTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATG---AGAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTTCA--GTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGC---ACA-TT--A--GGC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGG--GA---TTT-TG--GTTGGT-CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATG---AGAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAAGAA-GCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GT-TAGt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACATGAA-ACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A-------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC---TGTGTGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAAT-TTCA-GATTACAGGAAACATGGTGTT-GA-AGG--AA---ACTACT--G--GGT-CCAACAA---CTGCAG-AA-AT-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCAC-AGGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTC-----AAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------------TGCAG--GAT-CCAAAA----CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATG---AGAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--TCA--A--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATATGAA-GCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--TGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATG---AGAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAG-AGTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTGT------AGAGCAGC-TA----ACCTTGT--T----------AGAG--CG-CTCCAAAATC--ATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA---------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
gi|9 : caTGT-GCTTGGG-GGCTGAA-CTTGT-GGTCT---AAG-------GCTTCATACAGTTTCCA--TTGTAGATCTAGAGCAGCTTAAATTACAT-GTAGTCTGAAACACGAAAG--CG-CTCCAACATC--GTTCGAAC-------aaagcgctccaacatcgttcgaaca
blockSeqs : A GT TC A A T AC T C T GA CAG G TG AA C CTTATCAAGTAATCATT GT AA A T A A A T TAAGCATA G TAGATC T TGNTATGT GGAGTT A TTA TAT C G G . AGATCT T AATT GTAGTCTGAAACACGAAAGCG AT . G T T . C GA T . . A C G C A C AC C C T AAGAAAGGTTCAAG A A T A T T AT CAG A C TG A . CTTG T A G T AT C AGA C C A T G T CA C T . C CAGCACATTAGGC AAT G A A C G GAA A C A AA T A C C G A TCCT CACAATAGCACCACAG T A AGA A A T AA T GT TCTTAAA C GTAC A T CGCATA GAGT CC CACTGGT GAC T G A GA T AGATATTATTC A AAA T AA C A AA AAG T A GCATTG TAA ATTAC T A T TC A TTCG A A GAC A TGTCTTATGATCTGCTCGCAGCT C T TCATAG TA ATGCACAATTA TTTAA T A AAGT A C T T ATT A G CGG T A A GG T T GG GAGGAGAGA A T TTTGACATTTTG GACATTTTGAAATTT TA C T C G C CTGCAG A GTGGTGA ACCTCA A A C G TT G A C A CAT C
blockSeqs : . G . . . . . A T T GC . TG . C CGAA . AA . T . . A . . G . . ACATGTA GAGTT . TG TAT C G G . . . . GTTAGAGTCCGC . . . . . . . . . . . A . G T G C . A A A AAAT A C . A A A CG . . C . . . GG G G A C CG C . T . T . . . CG T . . . GATTTTGGTTGGT AAA . . . A T . A T . G C . C . A G TGCT CACAGTAGTACCACAT T A AGG . C T . T T . . . . . . . CT A . A . . G T CA T . . . C . . . . . T . C C T T . . TTTT A T . T TGTCTTTAACCTGCG . A . . . . A T . T T . G . G . . . . T . T G . GATGGGAGG . A . . . T T . . T C . GA CC . T . C T G . A C AT .
blockSeqs : . . . T G . . . C GAA . GG . A . . T . . T . . GTTA GGGCT . TG . . G T . . . . TGTTAGAGCG . . . . . . . A . . C C T . . A . . T T C . . . CT T T T C TC A . C . C . . . CC T . . . AAACTACTGGGT . . . . G T . G A . C C . . . A G T CACAATAGCACCACAG . . . . T . . . T . . . . . . . . A . G . . C . A T . . . . . . . . . T . . . . . . . . . . . A CTGTG . T . . . . A A . T T . G . T . . . . T . T G . GAGAAGG . G . . . C T . . C . . CA CC . T . G T . . . . . .
blockSeqs : . ATGT . . . C T G G . CC C . C . C . . . AT A . . . GAACTTGGTGCG . . . . G . . A T . A . . . . . . . . T . . T CTTCG . G . . . . T C . . . . G . A . . . . A . T . . . . G . . . . C . . . . . AC TT .
blockSeqs : . C A . . . . . . . . A . . . CC A . . . TATTTGCTTGG . . . . A . . . . . G . . A . . . . . . . . . . .
blockSeqs : A . . . T A . . . TGCAGGAT . . . . .
blockSeqCons : ATGT***** GGGCT* *** NANCTGCTGGTGC********* C***** NA*****
originalCons : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGTAGTCTGAG-AGTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGG--GA---ACT-TG--G--GGT-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
finalCons : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCTATGT-----GTCTGAGGGCT-GAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTGT------AGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGGNANCTGCTGGTGC---------CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATG---AGAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTTCA--GCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATATGAA-GCTGGAANA-----CCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT
Alignments
lowQualScore : 2222 11 1 11 1 11 2222 1 11 44444444444444444 11 1 1 1 1 33333333 222222 1 2222 222222 1111111111 111 11 222222 1 2222 5555555555555555555555555 11 3333333 1 11 1 11 88888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1 1 11 888888888888888888888 1 111 1 11 111 1111 111 22222222222 111 1 111 1 1111 99999999999999999999999999999999999999 2222 1 11 111 3333333 1 2222 1 1 222222 2222 2222222 111 1 1 11 444444444444 111 1 11 1 11 111 111111 111 22222 11 22 22222 1 111 77777777777777777777777 222222 11 33333333333 22222 1111 111 111 55555555555 444444444444 555555555555555 11 222222 2222222 111111 1 111 1 111 1
lowQualScore : 1 8888 33 3 7 7 0 11 0 0 8 3 0 00 4444 0 55 0 11 2 66666666666666666 33 77 0 3 0 0 1 0 66666666 1 888888 0 8888 88 888888 8 5555555555 666 0 2 2 33 888888 0 1111 0 2222222222222222222222222 33 2222222 6 3 0 7 88 3 88 0 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 3 0 2 6 2 2 33 1 1 1 777777777777777777777 3 1 0 0 3 1 1 99 777 0 6 88 7 111 8888 33 1 1 5 22 2 111 1 6 6 5 5 5 6 44 5 5 5 3 666 66666666666 0 777 6666 5 7 1 111 6 6 77 3 0 2 8 3 3 1111 00000000000000000000000000000000000000 7 7 0 2222 0 1 0 3 33 3 111 2222222 0 1111 0 0 0 888888 1111 66 6666666 444 1 0 0 11 3 444444444444 0 1 777 0 33 2 0 33 777 8 8 666666 444 33333 4 3 3 33 33 22222 3 0 0 444 1 11111111111111111111111 8 1 333333 11 88888888888 00000 1 1 7777 1 1 8 2 111 2 6 111 6 8 1 0 99 3 6 99 0 44444444444 6 5 111111111111 000000000000000 11 3 1 8 8 0 6 0 555555 8 4444444 555555 8 4 0 1 111 2 0 2 2 666 0
lowQualScore : . .... .. . . . . .. . . . . . .. .... . .. . .. . ................. .. .. . . . . . . ........ . ...... . .... .. ...... . .......... ... . . . .. ...... . .... . ......................... .. ....... . . . . .. . .. . . ................................................................................ . . . . . . . . .. . . . ..................... . . . . . . . .. ... . . .. . ... .... .. . . . .. . ... . . . . . . . .. . . . . ... ........... . ... .... . . . ... . . .. . . . . . . .... ...................................... . . . .... . . . . .. . ... ....... . .... . . . ...... .... .. ....... ... . . . .. . ............ . . ... . .. . . .. ... . . ...... ... ..... . . . .. .. ..... . . . ... . ....................... . . ...... .. ........... ..... . . .... . . . . ... . . ... . . . . .. . . .. . ........... . . ............ ............... .. . . . . . . . ...... . ....... ...... . . . . ... . . . . ... .
lowQualScore : 0 7777 00 3 3 3 7 00 2 0 8 2 2 88 0000 0 88 8 00 5 00000000000000000 88 88 0 5 0 0 0 0 22222222 0 888888 0 0000 88 222222 0 5555555555 222 8 5 5 88 888888 0 2222 2 8888888888888888888888888 88 5555555 7 3 7 3 33 3 33 7 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000 3 0 2 0 5 5 0 5 88 0 0 0 222222222222222222222 2 0 0 2 2 2 0 88 555 0 7 33 3 777 3333 55 0 0 2 00 5 777 0 7 6 7 7 7 6 99 7 7 7 0 999 33333333333 7 999 6666 7 6 3 777 0 7 77 2 0 5 0 8 2 6666 00000000000000000000000000000000000000 0 0 2 8888 0 0 2 2 88 2 000 5555555 0 2222 0 0 2 888888 2222 88 0000000 000 0 0 0 00 2 888888888888 8 0 555 0 88 5 0 88 555 0 0 000000 000 88888 2 5 5 88 88 88888 2 2 8 000 4 88888888888888888888888 0 0 000000 00 00000000000 00000 4 0 0000 0 4 0 5 777 2 7 777 7 0 4 6 22 5 7 22 7 77777777777 7 2 000000000000 000000000000000 00 2 7 0 0 8 4 8 000000 0 4444444 444444 0 2 0 0 000 5 0 5 5 555 0
consensus : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGT-GTCTGAGG-GTTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTG------TAGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGGGANC-T--GCTGGTGC-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATGA---GAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGAA-----GACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
Reference ( family-5939 ) : TATTTAGCCCATATGCNACCTTGTTT--GCCCAANCTTTTATATATTG-GGAAGAGAGATAAACATGGCGTACACAGCGCAGATATTCTGTCAAACGCGGCTCTGTTTT-CAACATCAAACCATTCGTCT-CTTGTCTCTGCA-C--TTTT-TTTGAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGG-GCTGAA-CNTGT-GGTCTTA--------GGCTGCACACAGNTTCCATTG------TAGAGCAGC-TAACCT----ATGT-GTCTGAGG-GCTGAA-CACGT-GGTCTTATAAG--CATAAGCTGCACACAGGTTCAA--TTG------TAGAGCAGC-TA----ACCT-GT--T----------AGAG--CG-CTCCAAAATC--GTTAGAAC-------TGGTTCAATCTTTTCACA-ATGCCGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTG-ACACAGTCATGGCAG--AGAAGACGTTGCAGACCTCGGATCATGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTCCGGCTGGAGTTGTTGAGGGCA--AAGTACCNCCAACTTCNACAACAAACACNAGGAAA--G-------T-----AAGAAACCAGACCAGAATGAATNAGCTGAGAAAGTAACTGC-TCAAGGCATGGCATTCCTTCTGAAACGTCAGGATGATGGTANCACGAAGGNGGGCTGGACAAGCTTCAATCAAACTGAAAGAAATGA---GGCACCAG-AGATGACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATTACCT--AAGACTTTCTCATAGTCA---GGC--GGGGGNGGGGGGGCTACCCACA---GCCTTGA-AATTCATGGAAGTCANT-GGCAAACACG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGGNANC-T--GCTGGTGC-CCAAAAA---CTGCAGAAA-AG-GTGATGGCTGG-AAAGTCGTATGACAATGGAATGA---GAACTCACAAGGTCACTCTTCAAGCTATG-TGAG-NATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCTCATGACAACGCTAGCATCAGAAGAGTTTG-GG-CA-GTCAGAGAANACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCAT------ATGTTTCAGTGCA----TGCCGCCAT-A-----TTTCACGAGAT---ACAACNGGATCAA-CT-AT-NCTCGCTGGGGGAC-A----------TTTATCTTNGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTAAC---TTTGTGGTCAAGTG----CTCCGCTCATCGCTTCAATTAGGTGTC--CC--TATTT-G-CTCAAGAGTGGATCAATGGTCTTGGCANAAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---CAGCCCTTTGCAGATGAACACTGTCTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TGACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAAGATNC----ACTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGACTCTACAAAA-CATTGCAAGCAAAG---AACTAGTCACTCAACAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAATAGGGAAAAGATCAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCGCGTGA--G--GAGGAAAA-TTGCTTTCAGGAACACCCTGCCAAAGAACA------------AATATTT---------------GACCTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATGAA-CACAGTCAAGGCAGGTAGAA-ACATCCTGCAACGCCTCATTGC-----TGCATAT-GAAGCTGGAA-----NACCAGTCAA---TC-TCAATAACATT-CTGATTCATGAACTGTTTGCGGCACCTTT-AGCCCTTNCAGAGGTGAA-T-GGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGAATGTAACAG
gi|1 : TATTTAGCCCATATGCCACCTTGTTTTGGCCCAAATTCTCATATACTG-GGAAGAGAAATAAACATGGCATACACAGTGCAGATGCTTTGTCAAATGCGGCTCTGTTTT-CAACATCAAACCATTCGTCC-CTTGTCTCTGCT-T--TTTT-TTTTAGAGCTTCAAGTACATGTGA--TCAA-ATT-------G-AA-----CTTTTCT--TCTT----------------TATGTGTCTGAGG-GCTGAA-CTTGT-GGTCTTA--------GGCTGTATACAGCTTCCATTG------CAGAGCACC-TAACTT----TTA--GTCTGA-------AA-CACG--------A-AAGAACACAA------CACTGGTCCAANATTG------CAGAGCACC-TA----ACTT--T--T----------AG-------CTTGAAACAC--GAAAGAACACAACACTGGTCCAATCTTTTCACA-ATGTTGGTAATGTTATCAGTTATCACAGACTGCTTCAAGTTG-ACACAGACATGGCAG--AGAAAACGCTGCAGGCATTGGATCCTGAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTTGGATGGAAATAAAATATACAGTTTCACACTACGCAGGTGGTCCGGGCAGGTGGCCAACTGGCAGCATGGTGATATTGAGACTTAAAATCCTTCCGAGAAAGAATTTATTCAAGT-CTCTGATGTGATGGAAGAAATCTTTCCAGCTGTAGTTGTTAAGGGTA--AAGTACCACCGGGTTCAACAACAAACATAAGGAAAAAG-------TGATTCAAGAAACCAGACCAGAATGAGTCACCTGAGAATGTAACTGC-TCAAGGCGTGATATTCCTTCTAAAACGTCAGGATGATGGCAACACGAAGGAGGGCTGGGCAAGTTTCAATAAAACTGAAAGAAATGA---GGTACAAG-AGATGACAAG
gi|1 : CAAACTAC-T--AAGACTTTCTCATAGCCACCCGG---GGGGGGGGGGGGGCTACCCAGA---GCCT-GA-AATACATGGAAGTCA-T-GGTAAGCTCG-TCC-AATCCTCAGGATTACAGGAAGCATGG-GTTAGA-AGGGAAC-T--G--GGGGT-CCAAAAA---CTACAGAAA-AG-ACGATGGCTGT-GAAGTCATATGACAATGGAATGA---GAACTCACAAAGTAACTCTTCAAGCTATG-TGAG-CATACTTCTTCTACAGCTGCTGAACT-TCATGACTGAAAACAATCCTGACCTGACG-AAATAATAGCTGGAGAAAGCA-----------CACA-----------G-----------AAGACCCCATGACAGCACTGGCATCAGAAAAGTTTG-GG-CA-GACAGAGAAGACTTCCTCAAAACCAATGACAATTCAAG--CTTCACATT-TTGGTGGGAATACTTGCAGATGGTTCACATCCTGC-------TACTATTCACTCG-TG----CTCAGAG-AAATGGTCTCTG-GAACCTTCATCTACAT------ATGTTTCAGTGCA----TGCTGCCAT-A-----TTTCATGAGAT---ACAAGTAGATCAA-CT-AT-TCTTGCTGGGGGAC-A----------TTTATTTTAGTG---AAATGTA-C--ACAGTT-TCAGAGGC--AGCCAA---ACAG-GAGTTT-GACGC---T--GGTAAT---TTTGTGGTCAAGTG----CTCTGCTCAACACTTCAATTAGGTGTC--CCCCTACTT-G-CTCAAGAGGGGATCAGTTGTCTTGGCACCAAAGGAGAAGGCATCATTGGAATCACATGAACGGCGT---GAGTCTTTTGCAGATGAACAC---CTT----------CG-----GTCTCACC-TTGCTAGGGAAACAAGGATATCCTTTGGTCTTGGATCTGGTGA------TAACAGGATCCACG--ACGAGACCACC-----------AAAGGCAA-----AAATAAAATTGATTTGCGAGATGAATATTC----GCTGCTGTCTGCT-CTGCAGAGGTTTGGTCGATTCTCAGACGATGCAC---CCCGGGCTCTACAAAA-CATTGCAAATAAAG---AACTAGTCTCTCAGCAAATTGAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAAAGATCAGCTGAATGAAT--TTTATGAGGAAA--CTACTGCCACGT-----------AAAA-TTGCTTTTTGAAACACCCTGCCAAAAAAGA------------AATATTT---------------GAACTTTTCTTTATCGTGTGAGGTT--CAGCCGCCAGACAATGAA-CACAATCAAGGCAAGTAGAA-AC--CCTGTAATGCCTCATTGC-----TGCATAT-GAAGGTG-------------GTCAA---TT-TCAAGAACATT-CTGATTTATGAACTGTTTGCGGTACCTTT-AGCCCTTTCAGAGGCGAA-TGGGT-AGCTGCGGACAGGAA-CAAAGGCAGTCCTT-ACCGAGGTCTTGCCTGCTGATAGCCCTTATGCTGACCACCTGAATGTAACAGtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactcaaactactaagactttctcatagccacccgggggggggggggggctacccagagcctgaaatacatggaagtcatggtaagctcgtccaatcctcaggattacaggaagcatgggttagaagggaactgggggtccaaaaactacagaaaagacgatggctgtgaagtcatatgacaatggaatgagaactcacaaagtaactcttcaagctatgtgagcatacttcttctacagctgctgaacttcatgactgaaaacaatcctgacctgacgaaataatagctggagaaagcacacagaagaccccatgacagcactggcatcagaaaagtttgggcagacagagaagacttcctcaaaaccaatgacaattcaagcttcacattttggtgggaatacttgcagatggttcacatcctgctactattcactcgtgctcagagaaatggtctctggaaccttcatctacatatgtttcagtgcatgctgccatatttcatgagatacaagtagatcaactattcttgctgggggacatttattttagtgaaatgtacacagtttcagaggcagccaaacaggagtttgacgctggtaattttgtggtcaagtgctctgctcaacacttcaattaggtgtccccctacttgctcaagaggggatcagttgtcttggcaccaaaggagaaggcatcattggaatcacatgaacggcgtgagtcttttgcagatgaacaccttcggtctcaccttgctagggaaacaaggatatcctttggtcttggatctggtgataacaggatccacgacgagaccaccaaaggcaaaaataaaattgatttgcgagatgaatattcgctgctgtctgctctgcagaggtttggtcgattctcagacgatgcaccccgggctctacaaaacattgcaaataaagaactagtctctcagcaaattgaagatgacctgttgctggctgcaaagtagggaaaagatcagctgaatgaattttatgaggaaactactgccacgtaaaattgctttttgaaacaccctgccaaaaaagaaatatttgaacttttctttatcgtgtgaggttcagccgccagacaatgaacacaatcaaggcaagtagaaaccctgtaatgcctcattgctgcatatgaaggtggtcaatttcaagaacattctgatttatgaactgtttgcggtacctttagccctttcagaggcgaatgggtagctgcggacaggaacaaaggcagtccttaccgaggtcttgcctgctgatagcccttatgctgaccacctgaatgtaacag
gi|10 : tatttagcccatatgccaccttgttttggcccaaattctcatatactgggaagagaaataaacatggcatacacagtgcagatgctttgtcaaatgcggctctgttttcaacatcaaaccattcgtcccttgtctctgcttttttttttagagcttcaagtacatgtgatcaaattgaacttttcttctttatgtgtctgagggctgaacttgtggtcttaggctgtatacagcttccattgcagagcacctaacttttagtctgaaacacgaaagaacacaacactggtccaanattgcagagcacctaacttttagcttgaaacacgaaagaacacaacactggtccaatcttttcacaatgttggtaatgttatcagttatcacagactgcttcaagttgacacagacatggcagagaaaacgctgcaggcattggatcctgaaacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgcttggatggaaataaaatatacagtttcacactacgcaggtggtccgggcaggtggccaactggcagcatggtgatattgagacttaaaatccttccgagaaagaatttattcaagtctctgatgtgatggaagaaatctttccagctgtagttgttaagggtaaagtaccaccgggttcaacaacaaacataaggaaaaagtgattcaagaaaccagaccagaatgagtcacctgagaatgtaactgctcaaggcgtgatattccttctaaaacgtcaggatgatggcaacacgaaggagggctgggcaagtttcaataaaactgaaagaaatgaggtacaagagatgacaagtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactGATTAACTGAATGAGTGGTGTTTTAAAAAA--CTACTGTCACATGA--G--AAGGAAAAATTGCTCTCATGA-CACCTTGC-AGAGA-CA------------AATATTC---------------GACCTTCTCGTCGTTGTTTGAGGTTTATAGCTGTCAAACAG-AAA-CATAGGCAAGGCAGATAGAA-A-ACCCCGCAACGCCTCACTG------TGCATATAAAAGCTGGAA-----GACCAGTCAAACCTCATCAATAACATT-CTGATCCATTAACTGTTTGAGACACCTTTCAGCCCTTGCAGAGGTGAC-T-GGTAAGCTGAGGACAGGCATCAAAGGCAGTCCTTCGCT
gi|12 : AAATCAATTGGCAAACACT-TTG-AATCAACAGTCCTGCTAGAATTATGG-ACT-GACAGTTATT-T--GCT--TGG-CAAAAAAAT-CTGCAGAGAGAGAGTACTGGCTGGAAAAGAC-TATGAAAGGGGAATGA---GAGCTTACAAAATTACATTCCAAACATTG-TGGGAAATCCTATTACCACAACTGATGGATTATCTTGA-TCAGAATAATCTTGAGTTGAAACAGAAAATT----GAGGAGGCA-----------GACcatgttatg
gi|13 : ataactaccgtatatattatctttGATTCACATTCTCAGACTTTACAAA--CATTGCAAGCAAAGCGGAACTAGTCAATCAACAAATTGAAGATGAC----------C-TGCAAAAAAAGGGACGAGATCAGGTGGATGAAT--TTTTT-AGGAGA--CTACTCCCACATGA--GGAGAGAAAAA-TTGCTTTCAAGGACACCTTGTCAAAGAACATTTGACATTTTGAACATTTGACATTTTGAAATTTGACCTTTTCGTCATTGTTTGGGGTT--CAGTTGTCAGACAATGA
gi|14 : GGACCGCGT---CAGCCCTCAGCAAGTGAACACTGTCTTATGATCTGCTCGCAGCTGTCTCATT-TCGCCAAGGAAACAAGGATATCCTTTGGTCTTGGATATAGTGATCATAGTGGCAGGATCCATGTAACGAGACCAGCATGCACAATTAAAAGGCAG-----AAATACAATTAATTTGCGAAGTGAAGATACAAGTACTGCAGTCTGCT-CTGCAAAGGTTTGGTCGATTCTCAGATGAT--AC---CCCGGAtc
gi|15 : aaCTTCCTGATAGTGA---GAC-------TTGGAGGTTTACATACA---GCACTGA-GCTTCTTGAAGGTCATT-GGGAAACACG-TTC-AGTCGTCTGGTCTCCTGGATGCATGG-GTC-GA-GAGCAGCAC--ATTAG-GC-CCCAAAA---CTGCGGAGC-AT-GTCCTGTTGGG-CAAGTCCTATGA
gi|16 : TCTACAAAA-CATTGCAAGCAAAG---AACTTGTCACTCACCAAATTGAAGATGGCCTGTTGCTGGCTTGC-AAAATAGGGAAAAGATGAGCTGGATGAAT--TTTTTGAGGAGA--CTACTGCCACGT-----------AAAA-TTGCTTTCA-GAACACGCTGCCAAACAA
gi|18 : GTTCTGTTTT-CAACATCAAACCATTCTTCT-CTTGTCTGTGCA-G--TTTT-TT--AGAGCTTCAAATCCATGTGA--Ttg
gi|2 : a---GGG--GGGGGGGGGGGAGCTACCGACA---GTCTTGA-AATTCATGCAAGTCACT-GGCAAACACT-TCC-AATCCTCAGATTTAGAGGAAGCATGG-GTT-GA-AGGGATT-TTGGTTGGT---CCAAAAAAAACTGCAGAAT-AG-GTGATAGCTGG-AAAGTCATATGACAATGGAATGA---GAACTCACAAGGTCACTCT------------GAG-GATACTTCTTCCCCAGCTGCTGAATT-TCATGACTAAAAGGAATCCTGATCTGAAG-AAAGAATTCCTGGAGAAAGCA-----------CACAATAGCACCACAG-----------AAGACCTCGTGACAACGCC---------------TG----CA-GTCAGAGAAAACTTCCTCAAAGCCAATGACAATTCAAG--CTTCACATT-T-GGTGGGGGTACTTGCAGATGGTTCACATCCTGC-------TACTATTCACCCG-TA----CTCAGAG-AGATGGTCTCTG-GAACCTTCATCTCCGT------ATGTGTCAGTGCA----TGCCGTTAT-A-----TTTCATGAGAT---ACAACTGGGTCAA-CT-AT-GCTTAC-GGGGGAC-A----------TTTATCTTAGTG---AAATGTA-C--ACAGTT-CCAGAGGC--AGTCAA---ACAG-GAGTTT-GAAGC---T--GGTGTC---TTTGTGGTCAAGTG--------------CGCTTCAATTAGTTGTC--CC--TATTTCG-CTCAATAGTGGATCAATGGTCTTGGCAAAAAATAAGAAGGGATCATTGCAATTACATGAACGGCGT---CATCCCTTTGCAGATGGACAC---CTG----------TG-----GTCTCATC-TAGCTAGGGCAACAAGGATATCCTATGGTCTTGAATCTGGTGA------TGATAGGATCTACA--ACGAGATCAAC-----------AAAGGCAG-----AAATAAAATGGATATGCGAGATGATGATTC----ACTG----------CTGCAGAGGTTTGGTCGATTCTCAAACGATGCAC---CTCTGACTCTACAAAA-CATTGTAAACACAG---AACTAGTCACTCAACAAATTCAAGATGACCTGTTGCTGGC-TGC-AAAGTAGGGAAATGATCAGCTGAATGAAT--TTT---AGGAGA--CTACTGCCGCGT-----------AAAA-TTGCTTTCAGAAACACCCTGCCAAAGAACA------------AATATTT---------------GGACTTCTCGTCATTGTTTGAGGTT--CAGCTGTCAGACAATAAACCATAGTCAAGGCAAGTAGAA-ACATCCTGCAATGCCTCATTGC-----TGCATAA-GAAGCTGGAA-----CACCAGTCAA---CC-TCAACAGCATT-CCGATTCATGAATTGTTTGTTGTACCTTT-AGCACTTCCAGAGGTGAATT-GGT-AGATGCGGACAGGAT-CAAAGGCAGTCCTT-GCTGAGGTCTTGACTGCTGATGTCTCTTGTGCTGACCACCTGGATGTAATAGgtaagtaaact
gi|20 : gggggggggggggggggggCTATAAAAGCATTGCAGGCAAAT---AACTAGG-----AACAAATTGAATATGACCTGTTGCTGAC-TGatatcaaagacctgctacttattgatggacacacact
gi|3 : cgc--GTCCAATCTTTTATGTATTG-GGAAAAGGGA-AAACATGGCGTACATAGCACAGATATTCTGTCAAACGCAGCTCTATTTTTCAACATCAAAA-A--CGTAGACTTGTTTCTGCAGC--TTTTGTTTGAGAGCTTCAAGTCC-TGTGAAATCCACAC--------G-AA-----CTTTTCTGTCCTTAACAAAATCATATCTTTATGTGTCTGAGGAGTTGAAACATGTTAGTCTTATAAGCATAAGCTGCACACAAGTTCAATTG------TAGAGCAGC-TAACCT----GTt
gi|3 : T----ATGT-GTCTGAGGAGTTGAAACATGTTAGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTG------TAGAGCAGC-TA----ACCT-GT--T----------AGAGTCCGCCTCCAAAATCATATTAGAAC-------T-GTTCAATATATTCACATATGCCTTTCATGTTATCAG--A--ACAGTCTGCTTCAAGTTGCACACAGTCATGGCAGGAAGAAGACATTGCAGACCTCGGA-CATGAAACAGtagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatcttTGCA-CACAGTCATGGCAGGAAGAAGACAT--TGCAG-ACCTC-----------GGACAT-GAAACAGGAAGTGGTGACCAATTTA---CC-TTCATCACCTGACAGATTCATgaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagtGGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-G-ATGTCTTCATGTCCTCTGATGTGATGGAAGAAATCTTT-CAGCTGGAGTGTTTGAGGGCAACAAGTACCCTCAACTTCCACAATAAACACTAGGAAA--A-------T----------ACCAG------ATGAATAAGCTGAGAAAGTAACTGCTTCAAGGCATGGAATTCTTTCTG-AACGTCAGGATGATGGTATCATTAAGGC-GGCTAGACAAGCTTCAATCAAACTGAAAGAAATGACAGGGCACCAGAAGATGATAGGttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|3 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgaCAAATTACCTTGAAGACGTTCTCATAGCCA---GGC--TGTG-TGGATGTG--------A---G---TGACAATTCATGGAGGTCACT-GGCAAGCACG-TCCTAATT-TCAG-ATTACAGGAAACATGGTGTT-GA-AGGAAAC-T--ACTGG-GT-CCAACAA---CTGCAGAAA--T-GTTATGGCTGT-GAAGTCGTATGACAA-GGAATGGAAGGAACTCACA-GGTCACTCTTCAAGCTATA-TGGG-CGTACTT-TTCTCctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagccaaattaccttgaagacgttctcatagccaggctgtgtggatgtgagtgacaattcatggaggtcactggcaagcacgtcctaatttcagattacaggaaacatggtgttgaaggaaactactgggtccaacaactgcagaaatgttatggctgtgaagtcgtatgacaaggaatggaaggaactcacaggtcactcttcaagctatatgggcgtacttttctctta
gi|4 : gtccaatcttttatgtattgggaaaagggaaaacatggcgtacatagcacagatattctgtcaaacgcagctctatttttcaacatcaaaaacgtagacttgtttctgcagcttttgtttgagagcttcaagtcctgtgaaatccacacgaacttttctgtccttaacaaaatcatatctttatgtgtctgaggagttgaaacatgttagtcttataagcataagctgcacacaagttcaattgtagagcagctaacctgttagagtccgcctccaaaatcatattagaactgttcaatatattcacatatgcctttcatgttatcagaacagtctgcttcaagttgcacacagtcatggcaggaagaagacattgcagacctcggacatgaaacaggaagtggtgaccaatttaccttcatcacctgacagattcatttcactttaatgtgacagctttgattcgagcctgatgaaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggatgtcttcatgtcctctgatgtgatggaagaaatctttcagctggagtgtttgagggcaacaagtaccctcaacttccacaataaacactaggaaaataccagatgaataagctgagaaagtaactgcttcaaggcatggaattctttctgaacgtcaggatgatggtatcattaaggcggctagacaagcttcaatcaaactgaaagaaatgacagggcaccagaagatgataggctttattacacgcctattattcagccatctgcacatgagtttaaacacagttgtaagcaacacatcagaacaaactggaataaattcattatattggtctcaaagttgatgaaggcactgttttgcaaattgaatggagctcaattggcaaagcAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGGA-AAATCTTTCTGG-TGGAGTTGTTGAGGGCA--AAGTACCACCAACTTCAACAACAAACATAAGGAAA--GAAAGGTTC-----AAGAAATCACACCAGAATAAATCAGCTAAGAAAGCAACTGC-TCAAGAAATGGCATTCCTTTCGAAACGTCAGGATGATGAAAACACGAAGGATCACTGAACAAGCTTCAATCAAACTGCAAGTAATGA---GGCACCAG-AGATGACAAGtta
gi|4 : TCATAGTCA---GGC--TGGGGTA--------ACTCAAAAGAGCCTTGA-AATTCATGGAAGTTAAT-GGCAATCACGGTCC-AATATTCATGATTACAGAAAGCATGG-GTT------------T--GCAGGATC-C--AAAA---CTGCAGAAA-AG-GCGATGGCTGG-AAAGTCGTACGACAA-GGAATGA---GAGCTCACGAGGTCGCTCTATAAGGTATGAGGAG-AATAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggagaatagaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|4 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaGAATAGAATCCTGGCCTGAAG-A-------------GAAAGCA-----------CACA-----------GTAGTACCACATACGACCTGATGACAACGTTAGCATCAGAAGAGTTTG-AGACAAGTCAGAGAACACTTCCTCAAAGCCAATGATAAA-AAAGAACTTCATATTGT-GGTGGGAATACTTACAGATTATTCACATCCTGC-------TACTATTCACTAT-TG----CTCAGAG-AGATGGTCTCCG-AAAACTTCATTTCAAT------GCGTTTCAGTGCA----TGCTGCCAT-A-----TTTCACGAAAT---gaatcctggcctgaagagaaagcacacagtagtaccacatacgacctgatgacaacgttagcatcagaagagtttgagacaagtcagagaacacttcctcaaagccaatgataaaaaagaacttcatattgtggtgggaatacttacagattattcacatcctgctactattcactattgctcagagagatggtctccgaaaacttcatttcaatgcgtttcagtgcatgctgccatatttcacgaaat
gi|5 : aaaccttcagagaggaatgtcttcatgtctctgatgtgatgggaaaatctttctggtggagttgttgagggcaaagtaccaccaacttcaacaacaaacataaggaaagaaaggttcaagaaatcacaccagaataaatcagctaagaaagcaactgctcaagaaatggcattcctttcgaaacgtcaggatgatgaaaacacgaaggatcactgaacaagcttcaatcaaactgcaagtaatgaggcaccagagatgacaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatcatagtcaggctggggtaactcaaaagagccttgaaattcatggaagttaatggcaatcacggtccaatattcatgattacagaaagcatgggtttgcaggatccaaaactgcagaaaaggcgatggctggaaagtcgtacgacaaggaatgagagctcacgaggtcgctctataaggtatgaggaTTCACGAAAT---ACATCAAGACCAA-CT-AC-CCTCGCTGGAGGACCA----------TCTATCGTTGTG---AAATGCATC--A-AGTT-CCAAAGGC--AGTCAA---ACAG-GTGTTT-GAAGC---T--GGCAAC---TTTGTGATCAAGCG----CTCTGCACATCGCTTTAATCAAGTGTC--ACA-TAT-------CAAG--TGATTCAATAGTATTGGAATAAAAGGAGGAGGCATCAATGGGATCACAAGGACCATGTGACCAGCCCGTACCAGGTAAGCACTGTCTTTAACCTG---CG-----ATACCACC-TTGCTGAGGAAACAAGGATATCCTTTGGTCTAGGATCTGGTGA------AGACAGGATCCACA--ACGAAACCACC-----------CAAGGCAA-----AACGAAAATTGAAATGCGAGATGAAGACAC----ACTACTGTCTGTTTCTGCAGAGGTCTGTTTTATTTTCAGACGATGCAC---CCCAAACTATACAAAA-CATTGCAAGCAAAG---ACCTTGTCACTCAACAAATTGAAGATTACCTGTTTCTGGC-TAC-AAAAAAGGGACGAGATCAGCTGGATGAAT--TTATTGCGGAGAGGCTGTTGCGGTGTGATGG--GAGGAAAA-TTGC-TTCAGGGACA-CCTGCCAAAGAACA------------GATATTT---------------GAC---CTCGTCATTGTTACAG--T--CAA--GTGGGAAGACGGT-CACAGTCAAGGCAGACATAA-ACATCTTGCAACACCTCATTGCTGCAGTGCATAT-GAAGCTGGAA-----ACCCAGTCAA---TT-TCAATAATATT-CTGATTTTTGAACTGTTTGTGGCACCTTT-AGTCCTTGCAGAGGTGAA-T-G-----------------------GACAGTCCTT-GCTGAGGTCTTGACTGCTGATGTATCTTGTCCTGACCACATGAATTCAACAG
gi|6 : CAAATTACCT--A-GACTTTCTCATAGTCA---GGCTTGGGGGAGGGGTGGCTACCCACA---ACCTTGA-AATTCATGGACGTCAAT-GGCAAACACA-ACC-AATCCTCAGGATTACAGGAAGCATGG-GTT-GA-AGGGAAC-T----TGGTGCGTCATAAA---CTGCAGAAA-AG-GTGATGGCTAG-AAGGTCATATGACAATGGAATGA---GAATTCAGAAGGTTACTCTTCAAGCTATG-TGAG-GATACTTCTTCCCCAGCTGCTGAACT-TCATGACTGAAAAGAATCCTGACCTGAAG-AAAGAATTGCTGGAGAAAGCACACAATAGCACCACA-----------G-----------AAGACC-CATGACAACGCTAGCATCAGAAGAGTTTGAGG-CA-GTCAGAGAATACTCCCCCAAATCCAATGACAATTCAAG--CTTCACA-T-T-GAGGGAGATACTTGCAGATGGTTCACATCCTGCTCTTAAATGCTATTCACTCGCTGGTACCTCAAAGAAGATGGTCTCTATGAACCTTCATGGCCATCGCATAATGTTTCAGTGCAGAGTTG--GCCATCACTGGTTCTCATGAGATGACACAACGGGATCAAGCTAATGACTCGCTCGGGAGC-AGATATTATTCTTGATTCTTGTGAAAAAAGGTA-CAAACAGTTACCAGAGGCAAAGTCAAAAGACAATGAGTTTAGAAGCGCATTGGGTAACTAATTTGTGGTCAatctcgaagaaaatccacttcttatcagtgagggacaggcact
gi|7 : attatgttggtcttacacttttgcaaattgatgaatctcaaatgggcaaagaAGAGCTTCAAGTCCATGTGA--TCCACACC-------G-AA-----CTTTTCT--TCTTAACAAA-TCATATCTTTATGTGTCTGAGA-GTTGAA-CATGT-GGTCTTA--------GGCTGCACACAAGTTCCATTG------TAGAGCAGC-TAACCTTGNTATGT-GTCTGAGA-GTTGAA-CATGT-GGTCTTATAAG--CATAAGCTGCACACAAGTTCAA--TTG------TAGAGCAGC-TA----ACCTTGT--T----------AGAG--CG-CTCCAAAATC--ATTAGAAC-------TGGTTCAATCATTTCACA-ATGCTGGTCATGTTATCAGTTA--ACAGTCTGCTTCAAGTTA-ACACAGTCATGGCAG--AGAAGACATTGCAGACCTCGGATCATGAAACAGnnnnnnnnnnnnnnnnnnnnnnnnngcaggagttag
gi|7 : GGGAACATGATGAT-TAAAGACTTAAAAACCTTCAGAGAG-GAATGTCTTCATGT-CTCTGATGTGATGGAAGAAATCTTTTCAGCTGGAGTTGTTGAGGGCA--AAGTACCCTCAACTTCCACAATAAACACTAGGA---------------------AAATCAGACCAGAATGAATAAGCTGAGAAAGTAACTGT-TCAAGGCATGGCATTCTTTCTGAAACGTCAGGATGATGGTATCATGAAGGCGGGCTAGACAAGCTTCAATCAAACTGAAAGAAATGA---AGCACCAT-AGATGATAGgagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgagggaacatgatgattaaagacttaaaaaccttcagagaggaatgtcttcatgtctctgatgtgatggaagaaatcttttcagctggagttgttgagggcaaagtaccctcaacttccacaataaacactaggaaaatcagaccagaatgaataagctgagaaagtaactgttcaaggcatggcattctttctgaaacgtcaggatgatggtatcatgaaggcgggctagacaagcttcaatcaaactgaaagaaatgaagcaccatagatgatag
gi|8 : agagcttcaagtccatgtgatccacaccgaacttttcttcttaacaaatcatatctttatgtgtctgagagttgaacatgtggtcttaggctgcacacaagttccattgtagagcagctaaccttgntatgtgtctgagagttgaacatgtggtcttataagcataagctgcacacaagttcaattgtagagcagctaaccttgttagagcgctccaaaatcattagaactggttcaatcatttcacaatgctggtcatgttatcagttaacagtctgcttcaagttaacacagtcatggcagagaagacattgcagacctcggatcatgaaacaggagtggtgaccccatttaccttcatccctgacagattcattcactttaattgtgacagcattgattcgagcctggatggaaagaacggctggcaatgtggttctgaAG-GAGTTA-GAAGA---T--GGTAAC---TTTGTGGTCAAATAATTACTCCGCTCATCGCTTCAATTAGGTGTCTCCC--TATTT-TTCTGAAGAGTGAATCTATGGTCTTGGCA-AAATGGAGAAGGCGTCATTGGAATCGCATAAACGGCGT---CAGCCCTTTGTAGATGGACGC---CTT----------CG-----GTCCCACCCTTGCTAGGGAAACAAGGGTATCCTGTGGTCTTGGATCTGGTGA------TGACAGGATCCACA--ACGATACCACC-----------AAAGGCAATTTAAAAATAAAATTGACTTGCGAGATGAAGATCC----ACTGCTGTCTGTT-CTGCAGAAGTTTGGTCAATTCTCAGACGATGCAT---CCCAG
gi|9 : TATTTAGCCCATATGCAACCTTGTTT-------AG-TTTTAGATATTGAGGAAG-GAGATAAGCATAACGTACACAGTGCAGATATTCTGTCAA--TTGGATCTATTTT-CAATATCAAACAATTTATCT-CTTGTCTCTGCA-CAGCCTT-TTTGAGAGCTTCAAACTCATGTGA--ACCACACCTTATCAAGTAATCATTCTTTTCT--TCTTGGCAAA-TCATATCATTCTGTGCTTGGGG-GCTGAA-CTTGT-GGTCTAA--------GGCTTCATACAGTTTCCATTGTAGATCTAGAGCAGCTTAAATTAC--ATGTAGTCTGA-------AA-CACG
gi|9 : caTGT-GCTTGGGG-GCTGAA-CTTGT-GGTC---TAAG-------GCTTCATACAGTTTCCA--TTGTAGATCTAGAGCAGCTTAAATTACAT-GTAGTCTGAAACACGAAAG--CG-CTCCAACATC--GTTCGAAC-------aaagcgctccaacatcgttcgaaca
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): CTACATCTTGCATGCATTCAGGCTGATGCTGGGCCTTTCTTTCATGAGGTATTTACCACTTGCAATTTTGCTCGATGGGGTACAGAATACCTCAGGTGAGATGAATCAGCTGCCATGAAGCTGTGCAACAAAGTTTGACGAGGACAATATCGTGTCAAGAGATTCAGAGAACAAGTTTAAACCAGGGTGGAATCCTTATCAGAGCCAGGAAGATGGAATGGCCAGGCAAAGAGTGGTGCGATCGTTGCATCTCAAAGACATCATCAGCTTGAGCAGGTGGGCTCTCTCCTTC
Unaligned ( gi|17 ): CAACTACCTCACATGAATTCTAATCTGAAAGCAATTGGCAAACACTTTGGAATAAAGCCAGGCCTGGCAATACGATACTATGGACCCGCAGAGTAATGTTGTCGTTGCCACTGACAAAACTGCCGTGGAGAGAGTACT
Unaligned ( gi|19 ): GGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGCCGTCTACGACAGTCTTAAATAAATCTTACAATCACT