lowQualScore : 1111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 2 33 555555 88888888888888888888 2222222222222222222222222222222222222222222222 2 3333 22222222222222222222222222222222222222222222222222222222222 1 1 666666666666666 111111 111111 77777777777777777777777777777 22222222 11 22 2222222222222222 111 111111111 11 22 11111111 7777777777777777777777777777777777777777777777777777777777777777777777777777 222222222222222222 6666666666666666666666666666666666666666666666666666666666666666666666666666666 111111 11 1 2222222222 1 11
lowQualScore : 6 2 0 0 00 3 999999 4 11111111111111111111 4 2 7777777777777777777777777777777777777777777777 4 3 2 0 7777 99999999999999999999999999999999999999999999999999999999999 6 5 9 3 0 0 3 3 66 1 444444444444444 1 3 5 3 99 11 999999 111111 1 99999999999999999999999999999 22222222 5 77 11 11 99999 8888888888888888 7 888 66 444 444444444 4 33 77 99999999 7 7777777777777777777777777777777777777777777777777777777777777777777777777777 5 666666666666666666 1 5 5 33 8888888888888888888888888888888888888888888888888888888888888888888888888888888 5 3 444444 5 11 0 1111111111 5 0 5 11
lowQualScore : . . . . .. . ...... . .................... . . .............................................. . . . . .... ........................................................... . . . . . . . . .. . ............... . . . . .. .. ...... ...... . ............................. ........ . .. .. .. ..... ................ . ... .. ... ......... . .. .. ........ . ............................................................................ . .................. . . . .. ............................................................................... . . ...... . .. . .......... . . . ..
lowQualScore : 0 5 0 0 55 0 000000 0 55555555555555555555 0 5 0000000000000000000000000000000000000000000000 0 0 5 0 5555 55555555555555555555555555555555555555555555555555555555555 7 0 7 3 7 7 2 2 22 0 777777777777777 0 2 2 7 22 77 222222 777777 4 99999999999999999999999999999 11111111 7 99 99 22 88888 1111111111111111 4 888 99 999 555555555 5 88 44 66666666 0 9999999999999999999999999999999999999999999999999999999999999999999999999999 7 444444444444444444 4 7 1 44 6666666666666666666666666666666666666666666666666666666666666666666666666666666 0 1 444444 0 99 0 9999999999 0 1 5 00
consensus : NNNNNNNNNNNNTATATGTGTTTTGTNAGTCTACACCAGTGAATATTTTNTCCTCT--AATTTGACCGGTTAGGCTGAGCGCTTATTTNTCGTATTTTCTTTGTCGGTCAGTCCTATGGAAAACGAACTNTTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTANATTTTCACTCTGCCTTGAANTGTATCATTGGNGGTGGGGGGTTAANACATTGGTATTTTAAATTGTCATTTT-------NTTTTTA--A----A-TACTGT-----A-----GCTCGTTCGT-CCCTAACTGTAGA-ATTTCGTATCGTAAATGTACATTTTTTT---TT--AGTA----ATTCTGGTCTTTTATTTTGGGTAAACTTT--ACAT------TCTCCTCT-GATTAAAT----TGT-----TTCAT-GTTCATT----GAAAACTTT--NTA-TTTGTT--ATCAAC--TATTCTT-AA--CC-ATAT------GT--ACTTATGCTNTAATAAATTT---GTA--AACTT-NACA---GA----TCTTTTCA-TTTCAAACAAGAGTGTN--G--A-GCATAATCTGGGA---A--TCAC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG----TA--GT---GTG-TTTCA-----TAA-AGT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC----TA--TTGACAGTGA-TGAGTTC-TT---A-TA----C-------------T--TTGTG-----C-----------TTT-GGGA------GAA-GC--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGC--TTCTTGTTACG
Reference ( gi|1 ) : TACTGATACATGTACATGTATTTTGTCAGTCTAC-CC-GTACATATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCGTCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGT---GACATTGG-------------TATTTT-------TTTTTTA--A----A-TACTGT-----A-----GCTCGTTTGTGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTTTTTTTTT--AGTA----ATTCTGGTCTTTTATTTTGGGTAAACTTT--ACGT------TCTCCTTT-GGTTAAAT----TGT-----TTCAT-ATTCACTAC-AGAAAACTTT--GTA-TTTGTT--ATCAAC--TATTCTTTAA--TC-ATAT------GT--ACTTAGGCTATAATAAATTT---GTA--AATTT-AACA---AA----TCTTTTCC-TTTCAAACAAGAGTGTA--G--A-GCATAATCTAGGA---A--TGAC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---GAG----TAT-GT---GTG-TTTCA-----TAA-AGT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACAC----TATTTTGACAGTGACTGAGTTT-TT---A-TA----C-------------T--TTGTG-----C-----------TTT-GAGA------GAA-GC--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATAC--TTCTTGTTACGTT
gi|14 : TATATGTATTTTGTCAGTCTACACCAGTA--TATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG--------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTC
gi|2 : cactgaATGTGTTTTGTAAGTCTAC-CC-GTGAATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCGGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGT---GACATTGG-------------CATTTTAAATGTGTTTTTTA--A----AATACTGT-----ATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACATTTTTTT-------AGTA----ATTCTGGTCTTTTATTTTGGGTAAACTTT--ACAT------TCTCCTTTTGGTTAAAT----TGC-----TTCAT-ATTCACTAC-AGAAAACTTT--GTA-TTTGTT--ATCAAC--TATTGTTTAA--TC-ATAT------GT--ACTT-GGCTATAATAAATTT---GTA--AATTT-AAGA---AA----TCTTTTCC-TTTCAAACAAG-GTGTA--G--A-GCATAATCTTGGA---A--TGAC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---TAG----TAT-GT---GTG-TTTCA-----TAA-AGT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACAC----TATATTGACAGTGACTGAGTTT-TC---A-TA----C-------------T--TTGTG-----C-----------TTT-GAGA------GAA-GC--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGC--TTCTT
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAATTGTTATTTT-------CTTTTTATCA----A-TACTGTATGGAA-----G-TCGTTTGATCCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACAGGTTTTT--------GTA----ATTCTAGCCTTTCATTTTGGGTAAACTTT--ACGT------TCTCC
gi|7 : ATTCT-------GTTTTTG--ATCGTG-TATTGA-----A-----GCTCGATCGT-TCCTAACTTTAGATCTTTCTTATGATG---GTACAT----------------A----ATTTTA---TTTTGTCTTGCTTGAA-TTT--A-AT------TCT------GGTTAAAT----T---------------------------AA--TT--G-A-TTT-TC--GTC--T--TATTCTTAAA--CC-ATAT------TT--ACTTACGCTATAATAAATTT---CTA--AACTT-TACA---GA----TGTTTTCA-GTTCAAAGGTG-GTGTT--G--------AATCTAGGA---A--TCAC--T-------ACCAAACCGG-G--GT-----AGAA--CACGGAT--ACCCG----------GT---GTG-TTTCA-----T-------------------GCGAGCC-CCTTTGATCCTTAGCACTTGGTACTTTTAAATTTGGTAAGGCT-GT---A-GA----A-------------C--TTGTG-----C-----------TCT-GTGA------GAA-GC--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGC--TTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|6 : aAAATGT----TCTCTTACTTT--ATCA----GTTATGGTGAATTAGTTTGA-CAAATTTTTTACAT------TCTTTTCT-GATTAAAC----TAA-----TTCATTGTTTGTTT---GAAATCTTA--CTA-ATTGTT--ATCAATAATATTCTA-AA--TCTATAT------TC--ATT---GTT-TAATAAATTT---GTA--AACTT-CACA---AG----TCTTCTCA-TTTCATACCA-AGTGGA--C--AGGAATAA-ATGAGA---ACTTTACAAA-------ACCGAATGTG-G--A------ACAATGTACAAACATA---GAGACGATACAGT---GT--TTTCA-----TAA-ATTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTAT----TA--CTGATAG----TGAGTTC-TTCTCA-TAAAGGCAATCGAA------T--TTGAA-----C-----------TTT-TGGG------AAA-GC--TAG-ACT----------TTTTTCAGG-CCCAGCATtctgt
gi|8 : gtatggaagcttgttactgtcatctttaaTTTATTTTTATTGCAGTACTCAATTCTGGCCTTTTA----GGATACACTTT--ATAT------TC--CTCT-GATTATAT----T--------------TTCATT----GGAAATGTT---TACTTTGCT--ACCAAC--TGTCCTTAAA--CC-GCGT------GC--ACTACTGCTGTGAAAAAAAT---ATA--AATTTTAACATCAAA----T---TTCA-ATTCAAACAAG---GTG--GTTA-GCATAATGTTGGA---G--TCAC--T-------ACCCAAACTG-A--GT-----TCAA--CTTGGA--------AA----TA--GT---GTG-TCTCA-----g
gi|3 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagacTA----ATTTTGATCAATTATTTTGGGCAAATTTT--ACGTGTATATTCTTTTCT-GATTATATACACTGTACTCATTCAT-GTTCATTTTTAAAAAATCTTCAACA-TTTGTT--ATCAGT--TATTCT--AA-----ATGT------AT--ACTCATGCTTTAATAAATTT---GTA--GACTT-TACA---AG----TCTTTTTCATTTCAAACAA-AGTGTT--A--A-GTATAATCTGGGAATCA--TGAC--TGTCATTGACTGACTGTG-GGTACAATGTACAA--CACGGAG--A---GAG----CA--------TG-TTTCA-----TAA-TCC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTAC----TA--CTGACTGTGAA-AAG-----T---ACTA----C-------------TGACTGTGACCTCT-----------TTT-GAAA------AAG-ACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTCaag
gi|13 : AT----TGT--------AT-ATTCATT---GGAAAAGGTT--TTA-TTTGCCAAACCAAC--TATCCTTCAA--CC-ACAA------GT--GCTACTGCTGTCATCAATTTAAAAAA--AAT----ACA---GATATTTTTTTTTA-TTTCAAACAA-AGTGtggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|9 : gT----TAT-----TT-AT-TTTCATTG---GAATACTAA--TCA-TTCGTT--ATCAAGA-TATTCT--AC--TT-ATAT------ATCGAATTATGTTTCAATAAATTT---GTAATAATT---GCA---GA----TCTTTTCA-TTTCAAGCCACA-TGTT--G--A-TCATGATCTGGGA---A--T----------------------------C-----GCAA--C-----C--A---------------T---GTG-TTTCAAAATTTAATAGT---A-CT-GTATAATAAGTC-TGTC---TCCC----------------GACAG----TGAGTTCATT---A-CA----CAAAGACGACAGAAC--TTGTA-----C-----------TGT-GGGATGGGGGAAA-GC--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATg
gi|5 : gttttgcAAC--TATTTCATAAATTC-ATATTTGTCTGT--A-TTA---TATGATAAATCT---ATG--AACTT-TACT---GG----TGCTTTCA-TTTTAAACAAG-GTGTATTG--A-ACAAAATCTGAAA---A--TCACA-A-------ACTGAATCTGTGT-ACAATGTACAA--CACGAA---A---CAG----TAT-GTTTCATGATATGA-----TGA-TAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTAC----CA--TTGACAG----TGAGTTC-GT---G-T-----C-------------G--TAGCA-----CATCCGATAGAACTT-GTGA------GAA-TC--TAG-AGT----------TACTTCAGT---CATCATAC-----TACGGTTCCGGTTACgtt
gi|4 : gGT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAA----TATT--GACAGTGACTGAGTTT-TT---A-TA----C-------------T--TTGTG-----G-----------TTT-GGGA------GAA-GC--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGC--ATGTTGTTACGaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|16 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacTG-----C-----------TTTTGAGA------GAATGCC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGAC--TTTCTGT
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|11 ): CATAGAATACTTTAATTTTATTACAGTACTGAATTCAGGCCTTTTGGGGAAACAGTTTATATTCCTCTGATTGTATTTCCATTGGCAAAAAGGATTTATTTTTGCCACCAACTTCCTTAAACCTAACGTGCGCTACTGCTGTAATAATATTTTTAAAAAAAATTAC
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT
Unaligned ( gi|15 ): CATGAACTATTTCATGAATTCGCATTTGTCTATATTCAATGATAAATCTGTGATCTTTACTGGTGCTTTCATTTTAAACAAGGT
Alignments
lowQualScore : 2222 11 3333333 8888888888888888888888888888888888888888888888 2 3333 33333 2222222 44444444444 222 1 11111 11 2222 1111111 1111 3333333333333333333 3333333 111111 1111111 111111 1111111 222 2222222222 444444444444444444444444444444444444444444444444 11111 33333333333333 111111 3333 6666666666666666666666666666666666666666 2222222222222222 111111 11 1111111111
lowQualScore : 0 1 7777 99 1 0000000 0 1 7 6 0 1 0 4444444444444444444444444444444444444444444444 1 0 0 1 0 1 3 8888 7 88888 0 1 6666666 11111111111 2 2 111 0 0 2 0 88888 77 00 1111 3 1 777 66 4444444 1111 5 4444444444444444444 1111111 444444 777 4 55 88 3333333 999999 3 666 55 444 1 55 3 3 1 7777777 000 22 888 0 66 888 3333333333 5 1 6 999999999999999999999999999999999999999999999999 22222 0 33333333333333 22 5 3 222222 0000 9999999999999999999999999999999999999999 3333333333333333 4 0 222222 4 4 00 8 9999999999 4 1 1
lowQualScore : . . .... .. . ....... . . . . . . . .............................................. . . . . . . . .... . ..... . . ....... ........... . . ... . . . . ..... .. .. .... . . ... .. ....... .... . ................... ....... ...... ... . .. .. ....... ...... . ... .. ... . .. . . . ....... ... .. ... . .. ... .......... . . . ................................................ ..... . .............. .. . . ...... .... ........................................ ................ . . ...... . . .. . .......... . . .
lowQualScore : 7 0 3333 00 0 7777777 7 0 3 7 7 0 7 5555555555555555555555555555555555555555555555 0 7 7 0 7 0 7 7777 3 00000 8 0 0000000 00000000000 5 0 000 2 0 0 8 44444 66 77 2222 1 4 111 99 6666666 9999 4 2222222222222222222 8888888 444444 111 4 55 66 9999999 111111 6 444 00 777 0 00 6 6 0 1111111 999 99 888 2 99 888 9999999999 0 4 5 111111111111111111111111111111111111111111111111 55555 1 44444444444444 99 0 4 888888 1111 9999999999999999999999999999999999999999 3333333333333333 4 9 888888 4 4 66 9 4444444444 4 0 0
consensus : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-ATATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-GTCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGT---GACATTGGTATTTTAAAT-TG--ATTTTTTTTTTA--A----ATACTGT-----A-----GCTCGTTTG-TGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACA---TTTTT-TTTTAGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCAT-ATTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAA-ACTTTACAGAT----C--TTTTCATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------A-CCGAATCTG-G--AC-----A-----CAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-------A-GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
Reference ( family-3528 ) : NNNNNNNNNNNNTATATGTGTTTTGTNAGTCTACACCAGTGAATATTTTNTCCTCT--AATTTGACCGGTTAGGCTGAGCGCTTATTTNTCGTATTTTCTTTGTCGGTCAGTCCTATGGAAAACGAACTNTTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTANATTTTCACTCTGCCTTGAANTGTATCATTGGNGGTGGGGGGTTAANACATTGGTATTTTAAAT-TGTCATTTTNTTTTTA--A----ATACTGT-----A-----GCTCGTTCG-T-CCCTAACTGTAGA-ATTTCGTATCGTAAATGTACA---TTTTT-TTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGATTAAAT----TGT-----TTCAT-GTTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAA-ACTTNACAGAT----C--TTTTCATTTCAAACAAGA-GTGTNGA---GCATAATCTGGGAA--TC---AC--T-------A-CCGAATCTG-G--AC-----A-----CAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-------A-GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGA-TGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
gi|1 : TACATGTATTTTGTCAGTCTAC-CC-GTACATATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCGTCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGT---GACATTGGT--------------ATTTTTTTTTTA--A----ATACTGT-----A-----GCTCGTTTG-TGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTTTTT-TTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------GTTCTCC-TTTGGTTAAAT----TGT-----TTCAT-ATTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATT-CT-TT-AA--T---C-ATA---TGT--ACT-TAGGCTATA--ATAA-ATTTGTAA-ATTTAACAAAT----C--TTTTCCTTTCAAACAAGA-GTGTAGA---GCATAATCTAGGAA--TG---AC--T-------A-CCGAATTTG-G--AC-----A-----CAA--CACGGAC--A---GAG------TATGTGTGTTTCA-----TAA-------A-GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACAC--TATTTTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATACTTCTTGTTACG
gi|11 : tactgatacatgA---TTTTA-TTACAGTACTGAATTCAGGCCTTTT-----GGGGAAACAGTTT--AT------ATTC--C-TCTGATTG-------TAT-----TTC------CATT----GGCAAA-AAGGATTTA--TT-TTTGCCA--CCAAC--T-TC-C--TT-AA--A---C-CTAACGTGC--GCT-ACTGCTGTA--ATAATATTTTTAA-Att
gi|13 : catagaatactttaAT----TGT--------AT-ATTCATT----GG-AAA-A---GGTTT--TA-TTTGCCAAACCAAC--TATC-C--TTCAA--C---C-ACA---AGT--GCT-ACTGCTGTC--ATCA-ATTTAAAA-AAAATACAGATATTTT--TTTTTATTTCAAACAA-A-GTGaaaaattac
gi|14 : gTATATGTATTTTGTCAGTCTACACCAGT--ATATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG--------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTCg
gi|15 : cactgaA--TGAAC--TATT-TCATG-AA--TTCGC-ATT---TGT---CTATATTCAATG--ATAA-ATCTGTGA-TCTTTACTGGT----G--CTTTCATTTTAAACAAG
gi|16 : cTG----C-----------TTTTGAGA------GAATG-CC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGACTTTCTGTgt
gi|2 : ATGTGTTTTGTAAGTCTAC-CC-GTGAATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCGGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGT---GACATTGGCATTTTAAATGTG------TTTTTTAA--A----ATACTGTATGGAA-----GCTCGTTTG-TGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACA-----TTT-TTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTTTTGGTTAAAT----TGC-----TTCAT-ATTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATTGT--TT-AA--T---C-ATA---TGT--ACT-TG-GCTATA--ATAA-ATTTGTAA-ATTTAAGAAAT----C--TTTTCCTTTCAAACAAG--GTGTAGA---GCATAATCTTGGAA--TG---AC--T-------A-CCGAATTTG-G--AC-----A-----CAA--CACGGAC--A---TAG------TATGTGTGTTTCA-----TAA-------A-GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTATA--TTGACAGTGACTGAGTT--------T-T-C---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGCTTCTTgtgttac
gi|3 : TA----ATTTTGATCAATTATTTTGGGCAAAT--TTT--ACGTGTATATTCTTT-TCTGATTATATACACTGTACTCATTCAT-GTTCATTTTTAA--AAA-A---TCTTCAACA-TTTGTTA--TCAGT--TATT-C--T--AA--------ATG---TAT--ACT-CATGCTTTA--ATAA-ATTTGTAG-ACTTTACAAGT----CT-TTTTCATTTCAAACAA-A-GTGTTAA---GTATAATCTGGGAA--TCATGAC--TGTCATTGA-CTGACTGTG-GGTACAATGTA-----CAA--CACGGAG--A---GAG------CA----TGTTTCA-----TAA-------T-CC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTAC--TA--CTGACTGTGA-AAAGTA--------C--------TA----C-------------TGACTGTGACCTC-----------TTT-TGAA------AAA-GACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTC
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAAT-TGTTATTTTCTTTTTATCA----ATACTGT-----ATGGAAG-TCGTTTGAT-CCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACA---GGTTT-TT---GTA----ATTCTAGCCTTTCATTTTGGGTAAAC--TTT--AC------GTTCTCC-tggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|4 : -GT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAA--TA--TTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----G-----------TTT-GGGA------GAA-G-C--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGCATGTTGTTACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|5 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAAC--TATTTC--AT-AAATT---C-ATA---TTT--GTC-TGTATTATATGATAA-ATCTATGA-ACTTTACTGGT----G--CTTTCATTTTAAACAAGGTGTATTGA---ACAAAATCTGAAAA--TC---AC--A-------AACTGAATCTGTGT-AC-----AATGTACAA--CACGAA---A---CAG------TA----TGTTTCA-----TGATATGATGATAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTAC--CA--TTGACAG----TGAGTT--------C-G-T---GT-----C-------------G--TAGCA----CATCCGATAGAACTT-GTGA------GAA-T-C--TAG-AGT----------TACTTCAGT---CATCATACT---ACGGTTCCGGTTAC
gi|6 : gAAATGTTC----TCTTA-CTTTATCA----GTTATGGTGAATTAGTTTGA-CAAAT--TTTTTAC------ATTCTTT-TCTGATTAAAC----TAA-----TTCATTGTTTGTTT---G--AAA-T---CTTAC--TA-ATTGTTA--TCAATAATATT-C--TA-AA--T---C-------TAT--ATT-CATTGTTTA--ATAA-ATTTGTAA-ACTTCACAAGT----C--TTCTCATTTCATACCA-A-GTG--GACAGGAATAA-ATGAGAACTTT---ACAAA-------A-CCGAATGTG-G--A------A-----CAATGTACAAACATA---GAGACGATACA-GTGT-TTTCA-----TAA-------A-TTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTAT--TA--CTGATAG----TGAGTT--------C-T-TCTCATAAAGGCAATCGAA------T--TTGAA----C-----------TTT-TGGG------AAA-G-C--TAG-ACT----------TTTTTCAGG-CCCAGCATaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|7 : gtatggaagcttgttactgtcatctttaaATTCTGTTTTTG--ATCGTGTATTGA-----A-----GCTCGATCG-T-TCCTAACTTTAGATCTTTCTTATGATG---GTACA---T------------A----ATTTTA---TTTTGTCTTGCTTGAA---TTT--A-------ATTCT------GGTTAAAT----TA----------------ATT----G--A--------TTTT--CG-TCT-------------TATT-C--TT-AAA-C---C-ATA---TTT--ACT-TACGCTATA--ATAA-ATTTCTAA-ACTTTACAGAT----G--TTTTCAGTTCAAAGGTG--GTGTTG--------AATCTAGGAA--TC---AC--T-------A-CCAAACCGG-G--GT-----A-----GAA--CACGGAT--ACCCG-----------GTGTGTTTCA-----T--------------------------GCGAGCC-CCTTTGATCCTTAGCAC------TTGGTACTTT-TAAATTTGGTAAGGC-TGT---AGA----A-------------C--TTGTG----C-----------TCT-GTGA------GAA-G-C--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGCTTCTTg
gi|8 : aA---TTTTTATTGCAGTACTCAATTCTGGCCTTTTA----GGATACAC--TTT--AT------ATTC--C-TCTGATTATAT----T--------------TTCATT----G--GAA-A----TGTT--TACTTTGCTA--CCAAC--TGTC-C--TTAAA--C---C-GCG---TGC--ACT-ACTGCTGTG--AAAA-AAATATAA-ATTTTA-ACAT----CAAATTTCAATTCAAACAAG--GTGGTTA---GCATAATGTTGGAG--TC---AC--T-------A-CCCAAACTG-A--GT-----T-----CAA--CTTGGA--------AA------TA-GTGTGTCTCA-----tctgt
gi|9 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagactttT----TAT-----TT-AT-TTTCATT----G--GAATA---CTAAT--CA-TTCGTTA--TCAAGA-TATT-C--T---A--C---TTATA---TATCGAAT-TATGTTTCA--ATAA-ATTTGTAATAATTG-CAGAT----C--TTTTCATTTCAAGCCACA--TGTTGA---TCATGATCTGGGAA--TC---GC--A-------A-CC--AT--------------------------------------------------GTG--TTTCAAAATTTAAT------A-GT---ACT--GTATAATAAGTC-TGTC---TCCC--------------GACAG----TGAGTT--------CAT-T---ACA----CAAAGACGACAGAAC--TTGTA----C-----------TGT-GGGATGGGGGAAA-G-C--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATGTTaag
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT
Alignments
lowQualScore : 1 1 2222 1 222 222 9999999999999999999999999999999999999999999999 1 222 5555555555555 2222222 55555 1 3333333333333 1111111 3333333333333333333 3333333 111111 11 222222 222 2222222222 4444444444444444444444444444444444444444444 11111 33333333333333 11111 2222 6666666666666666666666666666666666666666 2222222222222222 111111 11 1111111111
lowQualScore : 3 3 9999 3 555 7 555 0 2222222222222222222222222222222222222222222222 3 333 0000000000000 0 6666666 00000 2 8 0 0 0 3 77 4444444444444 1 3 1 777 66 4444444 3 5 4 1 4444444444444444444 1111111 444444 777 4 55 88 7 55 11 222222 3 666 55 444 1 55 3 8888 6666 000 00 888 0 66 888 8888888888 1 6 9999999999999999999999999999999999999999999 22222 0 11111111111111 22 5 3 2 11111 2222 9999999999999999999999999999999999999999 3333333333333333 4 0 222222 4 4 00 8 9999999999 4 1 1
lowQualScore : . . .... . ... . ... . .............................................. . ... ............. . ....... ..... . . . . . . .. ............. . . . ... .. ....... . . . . ................... ....... ...... ... . .. .. . .. .. ...... . ... .. ... . .. . .... .... ... .. ... . .. ... .......... . . ........................................... ..... . .............. .. . . . ..... .... ........................................ ................ . . ...... . . .. . .......... . . .
lowQualScore : 3 3 7777 3 777 3 000 7 0000000000000000000000000000000000000000000000 3 333 7777777777777 8 0000000 00000 5 8 2 0 8 6 66 3333333333333 1 1 4 111 99 6666666 4 7 0 9 2222222222222222222 8888888 444444 111 4 55 66 3 00 77 777777 6 444 00 777 0 00 6 5555 1111 999 66 888 2 99 888 9999999999 4 5 1111111111111111111111111111111111111111111 55555 1 88888888888888 99 0 4 0 55555 5555 9999999999999999999999999999999999999999 3333333333333333 4 9 888888 4 4 66 9 4444444444 4 0 0
consensus : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--A----ATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C---AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTCT-GGTTAAAT----TGT-----TTCAT-NTTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC-T--TTTCATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCACTA--T--TGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
Reference ( family-3528 ) : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTTTTTTTTTA--A----ATACTGTA-----GCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TTTT---AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTCT-GGTTAAAT----TGT-----TTCAT-ATTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC-T--TTTCATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCACTA--T--TGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
gi|1 : TACATGTATTTTGTCAGTCTAC-CC-GTACA-TATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCG-TCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTT--------------TTTTTTA--A----ATACTGTA-----GCTCGTTTGTGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTT-TTTTTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------GTTCTCCTTT-GGTTAAAT----TGT-----TTCAT-ATTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATT-C--TTTAA--T---C-ATA---TGT--ACT-TAGGCTATA--ATAA-ATTTGTAAATTTAACAAA----TC-T--TTTCCTTTCAAACAAGA-GTGTAGA---GCATAATCTAGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---GAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTATTT--TGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATACTTCTTGTTACG
gi|11 : tactgatacatgATTTTA-TTAC---AGTACTGAATTCAGGCCTTTT-----GGGGAAACAGTTT--AT------AT--TCCTCT-G-----AT----TGT--------AT-TTCCATT----GGCAAA-AAGGATTTA--TT-TTTGCCA--CCAAC--T-TC-C--TT-AA--A---C-CTAACGTGC--GCT-ACTGCTGTA--ATAATATTTTTAAAtt
gi|13 : catagaatactttaAT----TGT--------AT-ATTCATT----GG-AAA-A---GGTTT--TA-TTTGCCAAACCAAC--TATC-C--TTCAA--C---C-ACA---AGT--GCT-ACTGCTGTC--ATCA-ATTTAAAAAAAATACAGATATTTT-T--TTTTATTTCAAACAA-A-GTGaaaaattac
gi|14 : gTATATGTATTTTGTCAGTCTACACCAGT--A-TATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG---------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTCg
gi|15 : cactgaA--TGAAC--TATT-TCATG-AA--TTCGC-ATT---TGT---CTATATTCAATG--ATAA-ATCTGTGATCTTTACTGG----TG-C--TTTCATTTTAAACAAG
gi|16 : cTG----C-----------TTTTGAGA------GAATG-CC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGACTTTCTGTgt
gi|2 : ATGTGTTTTGTAAGTCTAC-CC-GTG-AATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-GGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGTGA---CATTGGCATTTTAAATGTG------TTTTTTAA--A----ATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACATTTTT-TT-----AGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTTTTGGTTAAAT----TGC-----TTCAT-ATTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATTGT--TT-AA--T---C-ATA---TGT--ACT-TG-GCTATA--ATAA-ATTTGTAAATTTAAGAAA----TC-T--TTTCCTTTCAAACAAG--GTGTAGA---GCATAATCTTGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---TAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTA--TATTGACAGTGACTGAGTT--------T-T-C---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGCTTCTTgtgttac
gi|3 : TA----ATTTTGATCAATTATTTTGGGCAAAT--TTT--ACGTGTATATTCTTTTCT-GATTATATACACTGTACTCATTCAT-GTTCATTTTTAA--AAA-A---TCTTCAACA-TTTGTTA--TCAGT--TATT-C--T--AA--------ATG---TAT--ACT-CATGCTTTA--ATAA-ATTTGTAGACTTTACAAG----TCTT--TTTCATTTCAAACAA-A-GTGTTAA---GTATAATCTGGGAA--TCATGAC--TGTCATTGACTGACTGTG-GGTACAATGTACAA--CACGGAG--A---GAG------CA----TGTTTCA-----TAA-T-------CC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTACTA--C--TGACTGTGAA-AAGTA--------C--------TA----C-------------TGACTGTGACCTC-----------TTT-TGAA------AAA-GACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTC
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAAT-TGTTATTTTCTTTTTATCA----ATACTGTATGGAAG-TCGTTTGATCCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACAGGTTT-TT------GTA----ATTCTAGCCTTTCATTTTGGGTAAAC--TTT--AC------GTTCTCCtggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|4 : -------GT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAATA--T--TGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----G-----------TTT-GGGA------GAA-G-C--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGCATGTTGTTACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|5 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAAC--TATTTC--AT-AAATT---C-ATA---TTT--GTC-TGTATTATATGATAA-ATCTATGAACTTTACTGG----TG-C--TTTCATTTTAAACAAGGTGTATTGA---ACAAAATCTGAAAA--TC---ACA-A-------ACTGAATCTGTGT-ACAATGTACAA--CACGAA---A---CAG------TA----TGTTTCA-----TGATATGATGATAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTACCA--T--TGACAG----TGAGTT--------C-G-T---GT-----C-------------G--TAGCA----CATCCGATAGAACTT-GTGA------GAA-T-C--TAG-AGT----------TACTTCAGT---CATCATACT---ACGGTTCCGGTTAC
gi|6 : gAAATGTTC-TCTTA-CTTT---ATCA----GTTATGGTGAATTAGTTTGA-CAAAT--TTTTTAC------ATTCTTTTCT-GATTAAAC----TAA-----TTCATTGTTTGTTT---G--AAA-T---CTTAC--TA-ATTGTTA--TCAATAATATT-C--TA-AA--T---C-------TAT--ATT-CATTGTTTA--ATAA-ATTTGTAAACTTCACAAG----TC-T--TCTCATTTCATACCA-A-GTG--GACAGGAATAA-ATGAGAACTTT---ACAAA-------ACCGAATGTG-G--A------ACAATGTACAAACATA---GAGACGATACA-GTGT-TTTCA-----TAA-A-------TTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTATTA--C--TGATAG----TGAGTT--------C-T-TCTCATAAAGGCAATCGAA------T--TTGAA----C-----------TTT-TGGG------AAA-G-C--TAG-ACT----------TTTTTCAGG-CCCAGCATaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|7 : gtatggaagcttgttactgtcatctttaa--ATTCTGTTTTTG--ATCGTGTATTGAA-----GCTCGATCGT-TCCTAACTTTAGATCTTTCTTATGATG---GTACAT---------------A----ATTTTA---TTTTGTCTTGCTTGAA---TTT--A-------ATTCT------GGTTAAAT----TA----------------ATT----G--A--------TTTT--CG-TCT-------------TATT-C--TT-AAA-C---C-ATA---TTT--ACT-TACGCTATA--ATAA-ATTTCTAAACTTTACAGA----TG-T--TTTCAGTTCAAAGGTG--GTGTTG--------AATCTAGGAA--TC---AC--T-------ACCAAACCGG-G--GT-----AGAA--CACGGAT--ACCCG-----------GTGTGTTTCA-----T--------------------------GCGAGCC-CCTTTGATCCTTAGCAC----T--TGGTACTT-TTAAATTTGGTAAGGC-TGT---AGA----A-------------C--TTGTG----C-----------TCT-GTGA------GAA-G-C--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGCTTCTTg
gi|8 : aATTTTTATTGC---AGTACTCAATTCTGGCCTTTTA----GGATACAC--TTT--AT------ATTC--CTCT-GATTATAT----T--------------TTCATT----G--GAA-A----TGTT--TACTTTGCTA--CCAAC--TGTC-C--TT-AAA-C---C-GCG---TGC--ACT-ACTGCTGTG--AAAA-AAATATAAATTTTA-ACA----TC-AAATTTCAATTCAAACAAG--GTGGTTA---GCATAATGTTGGAG--TC---AC--T-------ACCCAAACTG-A--GT-----TCAA--CTTGGA--------AA------TA-GTGTGTCTCA-----tctgt
gi|9 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagactttT----TAT-----TT-AT-TTTCATT----G--GAATA---CTAAT--CA-TTCGTTA--TCAAGA-TATT-C--T---A--C---TTATA---TATCGAAT-TATGTTTCA--ATAA-ATTTGTAATAATTGCAGA----TC-T--TTTCATTTCAAGCCACA--TGTTGA---TCATGATCTGGGAA--TC---GC--A-------ACC--AT---------------------------------------------GTG--TTTCAAAATTTAATA-------GT---ACT--GTATAATAAGTC-TGTC---TCCC--------------GACAG----TGAGTT--------CAT-T---ACA----CAAAGACGACAGAAC--TTGTA----C-----------TGT-GGGATGGGGGAAA-G-C--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATGTTaag
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT
Alignments
lowQualScore : 1 1 2222 1 222 222 9999999999999999999999999999999999999999999999 1 222 5555555555555 11 11 33333333333333 1111111 222222222222222 3333333 111111111111 11 111111 222 2222222222 4444444444444444444444444444444444444444444 11111 33333333333333 111111 2222 6666666666666666666666666666666666666666 2222222222222222 111111 11 1111111111
lowQualScore : 3 3 9999 3 555 7 555 0 2222222222222222222222222222222222222222222222 3 333 0000000000000 0 33 3 0 3 11 8 777 0 1 66 99999999999999 1 3 1 777 66 4444444 555 4 5 222222222222222 777 0000000 444444444444 4 55 88 7 55 55 999999 3 666 55 444 1 55 3 8888 55 4 000 00 888 0 66 888 8888888888 1 6 9999999999999999999999999999999999999999999 22222 0 11111111111111 22 5 3 222222 2222 9999999999999999999999999999999999999999 3333333333333333 4 0 222222 4 4 00 8 9999999999 4 1 1
lowQualScore : . . .... . ... . ... . .............................................. . ... ............. . .. . . . .. . ... . . .. .............. . . . ... .. ....... ... . . ............... ... ....... ............ . .. .. . .. .. ...... . ... .. ... . .. . .... .. . ... .. ... . .. ... .......... . . ........................................... ..... . .............. .. . . ...... .... ........................................ ................ . . ...... . . .. . .......... . . .
lowQualScore : 3 3 7777 3 777 3 000 7 0000000000000000000000000000000000000000000000 3 333 5555555555555 8 88 2 8 8 00 0 888 8 4 00 11111111111111 1 1 4 111 99 6666666 555 0 1 777777777777777 111 1111111 444444444444 4 55 66 3 00 44 111111 6 444 00 777 0 00 6 5555 55 0 999 66 888 2 99 888 9999999999 4 5 1111111111111111111111111111111111111111111 55555 1 88888888888888 99 0 4 888888 5555 9999999999999999999999999999999999999999 3333333333333333 4 9 888888 4 4 66 9 4444444444 4 0 0
consensus : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C----AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
Reference ( family-3528 ) : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C----AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
gi|1 : TACATGTATTTTGTCAGTCTAC-CC-GTACA-TATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCG-TCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTT--------------TTTTTTA--AATACTGTA-----GCTCGTTTGTGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTT-TT-TTTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------GTTCTCC-TTTGGTTAAAT----TGT-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATT-C--TTTAA--T---C-ATA---TGT--ACT-TAGGCTATA--ATAA-ATTTGTAAATTTAACAAA----TC--TTTT-CCTTTCAAACAAGA-GTGTAGA---GCATAATCTAGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---GAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACAC--TATTTTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATACTTCTTGTTACG
gi|11 : tactgatacatgATTTTA-TTAC----AGTACTGAATTCAGGCCTTTT-----GGGGAAACAGTTT--AT------AT--TCC-TCTG-----AT----TGT--------ATT--TCCATT----GGCAAA-AAGGATTTA--TT-TTTGCCA--CCAAC--T-TC-C--TT-AA--A---C-CTAACGTGC--GCT-ACTGCTGTA--ATAATATTTTTAAAtt
gi|13 : catagaatactttaAT----TGT--------ATA--TTCATT----GG-AAA-A---GGTTT--TA-TTTGCCAAACCAAC--TATC-C--TTCAA--C---C-ACA---AGT--GCT-ACTGCTGTC--ATCA-ATTTAAAAAAAATACAGATATTTT--TTTT-TATTTCAAACAA-A-GTGaaaaattac
gi|14 : gTATATGTATTTTGTCAGTCTACACCAGT--A-TATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG---------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTCg
gi|15 : cactgaA--TGAAC--TATT-TCATG-AA--TTCGC-ATT---TGT---CTATATTCAATG--ATAA-ATCTGTGATCTTTACTGG----TG--CTTT-CATTTTAAACAAG
gi|16 : cTG----C-----------TTTTGAGA------GAATG-CC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGACTTTCTGTgt
gi|2 : ATGTGTTTTGTAAGTCTAC-CC-GTG-AATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-GGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGTGA---CATTGGCATTTTAAATGTG------TTTTTTAA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACATTTTT-TT------AGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTTTTGGTTAAAT----TGC-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATTGT--TT-AA--T---C-ATA---TGT--ACT-TG-GCTATA--ATAA-ATTTGTAAATTTAAGAAA----TC--TTTT-CCTTTCAAACAAG--GTGTAGA---GCATAATCTTGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---TAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTATA--TTGACAGTGACTGAGTT--------T-T-C---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGCTTCTTgtgttac
gi|3 : TA----ATTTTGATCAATTATTTTGGGCAAAT--TTT--ACGTGTATATTCTTT-TCTGATTATATACACTGTACTCATTCATG--TTCATTTTTAA--AAA-A---TCTTCAACA-TTTGTTA--TCAGT--TATT-C--T--AA--------ATG---TAT--ACT-CATGCTTTA--ATAA-ATTTGTAGACTTTACAAG----TC--TTTTTCATTTCAAACAA-A-GTGTTAA---GTATAATCTGGGAA--TCATGAC--TGTCATTGACTGACTGTG-GGTACAATGTACAA--CACGGAG--A---GAG------CA----TGTTTCA-----TAA-T-------CC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTAC--TA--CTGACTGTGAA-AAGTA--------C--------TA----C-------------TGACTGTGACCTC-----------TTT-TGAA------AAA-GACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTC
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAAT-TGTTATTTTCTTTTTATCAATACTGTATGGAAG-TCGTTTGATCCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACAGGTTT-TT-------GTA----ATTCTAGCCTTTCATTTTGGGTAAAC--TTT--AC------GTTCTCC-tggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|4 : -------GT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAA--TA--TTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----G-----------TTT-GGGA------GAA-G-C--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGCATGTTGTTACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|5 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAAC--TATTTC--AT-AAATT---C-ATA---TTT--GTC-TGTATTATATGATAA-ATCTATGAACTTTACTGG----TG--CTTT-CATTTTAAACAAGGTGTATTGA---ACAAAATCTGAAAA--TC---ACA-A-------ACTGAATCTGTGT-ACAATGTACAA--CACGAA---A---CAG------TA----TGTTTCA-----TGATATGATGATAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTAC--CA--TTGACAG----TGAGTT--------C-G-T---GT-----C-------------G--TAGCA----CATCCGATAGAACTT-GTGA------GAA-T-C--TAG-AGT----------TACTTCAGT---CATCATACT---ACGGTTCCGGTTAC
gi|6 : gGTATGGAAGCTTGTT---------ACTGTC---ATCT----TTAAAAATGTTCTCTTAC-TT-T----ATCA----GTTATGGTGAATTAGTTTGA-CAAAT--TTTTTAC------ATTCTTT-TCTGATTAAAC----TAA-----TTCATTGTTTGTTT----G--AAA-T---CTTAC--TA-ATTGTTA--TCAATAATATT-C--TA-AA--T---C-------TAT--ATT-CATTGTTTA--ATAA-ATTTGTAAACTTCACAAG----TC--TTCT-CATTTCATACCA-A-GTG--GACAGGAATAA-ATGAGAACTTT---ACAAA-------ACCGAATGTG-G--A------ACAATGTACAAACATA---GAGACGATACA-GTGT-TTTCA-----TAA-A-------TTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTAT--TA--CTGATAG----TGAGTT--------C-T-TCTCATAAAGGCAATCGAA------T--TTGAA----C-----------TTT-TGGG------AAA-G-C--TAG-ACT----------TTTTTCAGG-CCCAGCATaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|7 : --ATTCTGTTTTTG--A-TCGTGTATTGAAGCTCGATCGT-TCCTAACTTTAGATCTTTCTTATGATG---GTACAT----------------A----ATTTTA---TTTTGTCTTGCTTGAA---TTT--A-------ATTCT------GGTTAAAT----TAA-----TTGATT--TTCGT----------------CTT------------------------ATT-C--TT-AAA-C---C-ATA---TTT--ACT-TACGCTATA--ATAA-ATTTCTAAACTTTACAGA----TG--TTTT-CAGTTCAAAGGTG--GTGTTG--------AATCTAGGAA--TC---AC--T-------ACCAAACCGG-G--GT-----AGAA--CACGGAT--ACCCG-----------GTGTGTTTCA-----T--------------------------GCGAGCC-CCTTTGATCCTTAGCAC------TTGGTACTT-TTAAATTTGGTAAGGC-TGT---AGA----A-------------C--TTGTG----C-----------TCT-GTGA------GAA-G-C--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGCTTCTTg
gi|8 : aATTTTTATTGC----AGTACTCAATTCTGGCCTTTTA----GGATACAC--TTT--AT------ATTC--C-TCTGATTA-----------------TATT--TTCATT----G--GAA-A----TGTT--TACTTTGCTA--CCAAC--TGTC-C--TTAAA--C---C-GCG---TGC--ACT-ACTGCTGTG--AAAA-AAATATAAATTTTA-ACA----TCAAATTT-CAATTCAAACAAG--GTGGTTA---GCATAATGTTGGAG--TC---AC--T-------ACCCAAACTG-A--GT-----TCAA--CTTGGA--------AA------TA-GTGTGTCTCA-----tctgt
gi|9 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagactttT----TAT-----TT-ATT--TTCATT----G--GAATA---CTAAT--CA-TTCGTTA--TCAAGA-TATT-C--T---A--C---TTATA---TATCGAAT-TATGTTTCA--ATAA-ATTTGTAATAATTGCAGA----TC--TTTT-CATTTCAAGCCACA--TGTTGA---TCATGATCTGGGAA--TC---GC--A-------ACC--AT---------------------------------------------GTG--TTTCAAAATTTAATA-------GT---ACT--GTATAATAAGTC-TGTC---TCCC--------------GACAG----TGAGTT--------CAT-T---ACA----CAAAGACGACAGAAC--TTGTA----C-----------TGT-GGGATGGGGGAAA-G-C--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATGTTaag
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT
Alignments
lowQualScore : 1 1 2222 1 222 222 9999999999999999999999999999999999999999999999 1 222 5555555555555 11 11 33333333333333 1111111 222222222222222 3333333 111111111111 11 111111 222 2222222222 4444444444444444444444444444444444444444444 11111 33333333333333 111111 2222 6666666666666666666666666666666666666666 2222222222222222 111111 11 1111111111
lowQualScore : 3 3 9999 3 555 7 555 0 2222222222222222222222222222222222222222222222 3 333 0000000000000 0 33 3 0 3 11 8 777 0 1 66 99999999999999 1 3 1 777 66 4444444 555 4 5 222222222222222 777 0000000 444444444444 4 55 88 7 55 55 999999 3 666 55 444 1 55 3 8888 55 4 000 00 888 0 66 888 8888888888 1 6 9999999999999999999999999999999999999999999 22222 0 11111111111111 22 5 3 222222 2222 9999999999999999999999999999999999999999 3333333333333333 4 0 222222 4 4 00 8 9999999999 4 1 1
lowQualScore : . . .... . ... . ... . .............................................. . ... ............. . .. . . . .. . ... . . .. .............. . . . ... .. ....... ... . . ............... ... ....... ............ . .. .. . .. .. ...... . ... .. ... . .. . .... .. . ... .. ... . .. ... .......... . . ........................................... ..... . .............. .. . . ...... .... ........................................ ................ . . ...... . . .. . .......... . . .
lowQualScore : 3 3 7777 3 777 3 000 7 0000000000000000000000000000000000000000000000 3 333 5555555555555 8 88 2 8 8 00 0 888 8 4 00 11111111111111 1 1 4 111 99 6666666 555 0 1 777777777777777 111 1111111 444444444444 4 55 66 3 00 44 111111 6 444 00 777 0 00 6 5555 55 0 999 66 888 2 99 888 9999999999 4 5 1111111111111111111111111111111111111111111 55555 1 88888888888888 99 0 4 888888 5555 9999999999999999999999999999999999999999 3333333333333333 4 9 888888 4 4 66 9 4444444444 4 0 0
consensus : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C----AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
Reference ( family-3528 ) : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C----AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
gi|1 : TACATGTATTTTGTCAGTCTAC-CC-GTACA-TATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCG-TCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTT--------------TTTTTTA--AATACTGTA-----GCTCGTTTGTGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTT-TT-TTTTTAGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------GTTCTCC-TTTGGTTAAAT----TGT-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATT-C--TTTAA--T---C-ATA---TGT--ACT-TAGGCTATA--ATAA-ATTTGTAAATTTAACAAA----TC--TTTT-CCTTTCAAACAAGA-GTGTAGA---GCATAATCTAGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---GAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACAC--TATTTTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATACTTCTTGTTACG
gi|11 : tactgatacatgATTTTA-TTAC----AGTACTGAATTCAGGCCTTTT-----GGGGAAACAGTTT--AT------AT--TCC-TCTG-----AT----TGT--------ATT--TCCATT----GGCAAA-AAGGATTTA--TT-TTTGCCA--CCAAC--T-TC-C--TT-AA--A---C-CTAACGTGC--GCT-ACTGCTGTA--ATAATATTTTTAAAtt
gi|13 : catagaatactttaAT----TGT--------ATA--TTCATT----GG-AAA-A---GGTTT--TA-TTTGCCAAACCAAC--TATC-C--TTCAA--C---C-ACA---AGT--GCT-ACTGCTGTC--ATCA-ATTTAAAAAAAATACAGATATTTT--TTTT-TATTTCAAACAA-A-GTGaaaaattac
gi|14 : gTATATGTATTTTGTCAGTCTACACCAGT--A-TATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG---------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTCg
gi|15 : cactgaA--TGAAC--TATT-TCATG-AA--TTCGC-ATT---TGT---CTATATTCAATG--ATAA-ATCTGTGATCTTTACTGG----TG--CTTT-CATTTTAAACAAG
gi|16 : cTG----C-----------TTTTGAGA------GAATG-CC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGACTTTCTGTgt
gi|2 : ATGTGTTTTGTAAGTCTAC-CC-GTG-AATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-GGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGTGA---CATTGGCATTTTAAATGTG------TTTTTTAA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACATTTTT-TT------AGTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTTTTGGTTAAAT----TGC-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATTGT--TT-AA--T---C-ATA---TGT--ACT-TG-GCTATA--ATAA-ATTTGTAAATTTAAGAAA----TC--TTTT-CCTTTCAAACAAG--GTGTAGA---GCATAATCTTGGAA--TG---AC--T-------ACCGAATTTG-G--AC-----ACAA--CACGGAC--A---TAG------TATGTGTGTTTCA-----TAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTATA--TTGACAGTGACTGAGTT--------T-T-C---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGCTTCTTgtgttac
gi|3 : TA----ATTTTGATCAATTATTTTGGGCAAAT--TTT--ACGTGTATATTCTTT-TCTGATTATATACACTGTACTCATTCATG--TTCATTTTTAA--AAA-A---TCTTCAACA-TTTGTTA--TCAGT--TATT-C--T--AA--------ATG---TAT--ACT-CATGCTTTA--ATAA-ATTTGTAGACTTTACAAG----TC--TTTTTCATTTCAAACAA-A-GTGTTAA---GTATAATCTGGGAA--TCATGAC--TGTCATTGACTGACTGTG-GGTACAATGTACAA--CACGGAG--A---GAG------CA----TGTTTCA-----TAA-T-------CC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTAC--TA--CTGACTGTGAA-AAGTA--------C--------TA----C-------------TGACTGTGACCTC-----------TTT-TGAA------AAA-GACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTC
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAAT-TGTTATTTTCTTTTTATCAATACTGTATGGAAG-TCGTTTGATCCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACAGGTTT-TT-------GTA----ATTCTAGCCTTTCATTTTGGGTAAAC--TTT--AC------GTTCTCC-tggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|4 : -------GT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAA--TA--TTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----G-----------TTT-GGGA------GAA-G-C--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGCATGTTGTTACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|5 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAAC--TATTTC--AT-AAATT---C-ATA---TTT--GTC-TGTATTATATGATAA-ATCTATGAACTTTACTGG----TG--CTTT-CATTTTAAACAAGGTGTATTGA---ACAAAATCTGAAAA--TC---ACA-A-------ACTGAATCTGTGT-ACAATGTACAA--CACGAA---A---CAG------TA----TGTTTCA-----TGATATGATGATAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTAC--CA--TTGACAG----TGAGTT--------C-G-T---GT-----C-------------G--TAGCA----CATCCGATAGAACTT-GTGA------GAA-T-C--TAG-AGT----------TACTTCAGT---CATCATACT---ACGGTTCCGGTTAC
gi|6 : gGTATGGAAGCTTGTT---------ACTGTC---ATCT----TTAAAAATGTTCTCTTAC-TT-T----ATCA----GTTATGGTGAATTAGTTTGA-CAAAT--TTTTTAC------ATTCTTT-TCTGATTAAAC----TAA-----TTCATTGTTTGTTT----G--AAA-T---CTTAC--TA-ATTGTTA--TCAATAATATT-C--TA-AA--T---C-------TAT--ATT-CATTGTTTA--ATAA-ATTTGTAAACTTCACAAG----TC--TTCT-CATTTCATACCA-A-GTG--GACAGGAATAA-ATGAGAACTTT---ACAAA-------ACCGAATGTG-G--A------ACAATGTACAAACATA---GAGACGATACA-GTGT-TTTCA-----TAA-A-------TTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTAT--TA--CTGATAG----TGAGTT--------C-T-TCTCATAAAGGCAATCGAA------T--TTGAA----C-----------TTT-TGGG------AAA-G-C--TAG-ACT----------TTTTTCAGG-CCCAGCATaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|7 : --ATTCTGTTTTTG--A-TCGTGTATTGAAGCTCGATCGT-TCCTAACTTTAGATCTTTCTTATGATG---GTACAT----------------A----ATTTTA---TTTTGTCTTGCTTGAA---TTT--A-------ATTCT------GGTTAAAT----TAA-----TTGATT--TTCGT----------------CTT------------------------ATT-C--TT-AAA-C---C-ATA---TTT--ACT-TACGCTATA--ATAA-ATTTCTAAACTTTACAGA----TG--TTTT-CAGTTCAAAGGTG--GTGTTG--------AATCTAGGAA--TC---AC--T-------ACCAAACCGG-G--GT-----AGAA--CACGGAT--ACCCG-----------GTGTGTTTCA-----T--------------------------GCGAGCC-CCTTTGATCCTTAGCAC------TTGGTACTT-TTAAATTTGGTAAGGC-TGT---AGA----A-------------C--TTGTG----C-----------TCT-GTGA------GAA-G-C--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGCTTCTTg
gi|8 : aATTTTTATTGC----AGTACTCAATTCTGGCCTTTTA----GGATACAC--TTT--AT------ATTC--C-TCTGATTA-----------------TATT--TTCATT----G--GAA-A----TGTT--TACTTTGCTA--CCAAC--TGTC-C--TTAAA--C---C-GCG---TGC--ACT-ACTGCTGTG--AAAA-AAATATAAATTTTA-ACA----TCAAATTT-CAATTCAAACAAG--GTGGTTA---GCATAATGTTGGAG--TC---AC--T-------ACCCAAACTG-A--GT-----TCAA--CTTGGA--------AA------TA-GTGTGTCTCA-----tctgt
gi|9 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagactttT----TAT-----TT-ATT--TTCATT----G--GAATA---CTAAT--CA-TTCGTTA--TCAAGA-TATT-C--T---A--C---TTATA---TATCGAAT-TATGTTTCA--ATAA-ATTTGTAATAATTGCAGA----TC--TTTT-CATTTCAAGCCACA--TGTTGA---TCATGATCTGGGAA--TC---GC--A-------ACC--AT---------------------------------------------GTG--TTTCAAAATTTAATA-------GT---ACT--GTATAATAAGTC-TGTC---TCCC--------------GACAG----TGAGTT--------CAT-T---ACA----CAAAGACGACAGAAC--TTGTA----C-----------TGT-GGGATGGGGGAAA-G-C--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATGTTaag
blockSeqs : A A GAA C T T GG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T ACA AAATTGTTATTT TC A T TG T TGC T TA ACAGTACTGA C T G CAG TT CGTGTAT CCT G A ACACTGTACTCATTC TGT TTTAA AAGGATTTA C AA AA G CA TC TTCG T ACG CG ATA G TG T TATT AA T GGT CAG CT ATG TGTCATTG G T GAACAATGTACAAACATAGAGACGATACAG AAATT TATGATGATAT CT A A TATA TGAC CTTCTCATAAAGGCAATCGAAT CATCCGATAGAA T TGGGGG T A AA T CATACTTTAG C G G
blockSeqs : . . A . . . . . . AAATGTG . A T AT . TGT T A GCAGTACTCA T T G C . T CC A T TGCTTC T ACAG ATCTTCAA . . A T . TA ATT . . . AC G . . . . . CA . . . AAA G G GGTACAATGTACAACACGGAGAGAGCA . ATTAGA GT . A TA TGAA CATTACACAAAGACGACAGAAC ACCTC . . . . C A . . C G
blockSeqs : . . C T . CTT G T TATCA T T G T . C TT A A TAATTC A GGC TACTAAT . . . . . T AC . . . AC A . . . . . A . . . AA G C TGTACAATGTACAACACGAAACAGTA . TAGT TT . A TA TGAC TGGTAAGGCTGTAGAAC C . . . . . . . . T G
blockSeqs : . . . . T T AGTA C G G C . C CC G A TAATTG A GG AGGTTT . . . . . G A . . . TG A . . . . . G . . . T G G GACACAACACGGACATAGTATG . AGT GT . C CA TTT TTCATACT C . . . . . . . . C C
blockSeqs : T C GTA T T T T . C TT A . TATTT G G ACTTTG . . . . . T C . . . CA T . . . . . A . . . T A C GGTAGAACACGGATACCCGG . TCC GT . A TA . TTTATACT G . . . . . . . . T C
blockSeqs : . . A C . A C . T C . . TGT T G TCTTAC . . . . . T T . . . TG A . . . . . A . . . T C C AGTTCAACTTGGAAATAG . . T . T . . CTACTGA C . . . . . . . . A T
blockSeqs : . . . . . . . TGT T G ATGTT . . . . . A T . . . CA T . . . . . G . . . A . . G . . . . . . CGTGTCG C . . . . . . . . A
blockSeqs : T T . CTT . . . . . T C . . . TA A . . . . . G C . . . . . . . .
blockSeqs : . . . . . C . . . AC G . . . . .
blockSeqs : . . . . . . . . TA T . .
blockSeqCons : AGTATA******** G****** T* G** GGTACAGTCAACACGGAACAGTA******************** TA****
originalCons : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-C----AGTA----ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAGA-GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTG-G--AC-----ACAA--CACGGAC--A---GAG------TA-GTGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCAC--TA--TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
finalCons : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TTAGTATA--------ATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCC-TCTGGTTAAAT----TGT-----TTCATN--TTCATTG------AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TC--TTTT-CATTTCAAACAAG--GTGTTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTGGGTACAGTCAACACGGAACAGTA--------------------TGTGTTTCA-----TAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCACTA----TTGACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT
Alignments
lowQualScore : 1 1 2222 1 222 222 9999999999999999999999999999999999999999999999 1 222 5555555555555 11 11 555555555555555555 1111111 222222222222222 3333333 111111111111 11 222222 2222222222 6666666666666666 333333333 11 3333333333333333 2222 6666666666666666666666666666666666666666 2222222222222222 111111 11 1111111111
lowQualScore : 3 3 9999 3 555 7 555 0 2222222222222222222222222222222222222222222222 3 333 0000000000000 0 33 3 0 3 11 8 777 0 1 777777777777777777 1 3 1 777 66 4444444 3 5 4 5 222222222222222 777 0000000 444444444444 4 55 88 7 55 11 222222 3 666 55 444 1 55 3 8888 55 4 4 6666 888 0 66 888 8888888888 3 2222222222222222 5 666666666 5 33 1111111111111111 22 5 3 2 77777 2222 9999999999999999999999999999999999999999 3333333333333333 4 0 222222 4 4 00 8 9999999999 4 1 1
lowQualScore : . . .... . ... . ... . .............................................. . ... ............. . .. . . . .. . ... . . .................. . . . ... .. ....... . . . . ............... ... ....... ............ . .. .. . .. .. ...... . ... .. ... . .. . .... .. . . .... ... . .. ... .......... . ................ . ......... . .. ................ .. . . . ..... .... ........................................ ................ . . ...... . . .. . .......... . . .
lowQualScore : 3 3 7777 3 777 3 000 7 0000000000000000000000000000000000000000000000 3 333 5555555555555 8 88 2 8 8 00 0 888 8 4 222222222222222222 1 1 4 111 99 6666666 4 7 0 1 777777777777777 111 1111111 444444444444 4 55 66 3 00 77 777777 6 444 00 777 0 00 6 5555 55 0 0 7777 888 2 99 888 9999999999 4 2222222222222222 0 666666666 0 88 1111111111111111 99 0 4 0 88888 5555 9999999999999999999999999999999999999999 3333333333333333 4 9 888888 4 4 66 9 4444444444 4 0 0
consensus : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-----A--GTAT--AATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTCT-GGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TCT--TTT-CATTTCAAACAAG-GTG--TTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTGG------GTACA-T---CAACACGG-A-ACAGTAT-GTG-T--TTCATAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCACTAT--T--GACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
Reference ( family-3528 ) : NNNNNNNNNNNNTACATGTATTTTGTCAGTCTAC-CC-GTG-A-TATTTTTTT-TCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-G-TCAGTCTTATGGAAAACGAACTATTCGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTTAAAT-TG--ATTCTTTTTTTA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTCGCATCATAAATGTACATTTTT-TT-----A--GTAT--AATTCTGGCCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTCT-GGTTAAAT----TGT-----TTCATN--TTCATT----G--AAA-A---CTTTN--TA-TTTGTTA--TCAAC--TATT-C--TT-AA--C---C-ATA---TGT--ACT-TATGCTNTA--ATAA-ATTTGTAAACTTTACAGA----TCT--TTT-CATTTCAAACAAG-GTG--TTGA---GCATAATCTGGGAA--TC---AC--T-------ACCGAATCTGG------GTACAGT---CAACACGG-A-ACAGTAT-GTG-T--TTCATAA-A-------GT---ATNTAGTATGATAAGTC-TTTCTGATCCCAAGCACTAT--T--GACAGTGACTGAGTT--------C-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GGGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACNCACANGCTTCTTGTTACG
gi|1 : TACATGTATTTTGTCAGTCTAC-CC-GTACA-TATTTTTTT-TCTGGAATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTCCG-TCAGTCTTATGGAAAACGAACTATTTGAGAGATATTCGCTATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGTTTTATACTAAATTTTTATTCTGCCTTGAAATGTATCATTAGGGG-GGGGGGTGA---CATTGGTATTTT--------------TTTTTTA--AATACTGTA-----GCTCGTTTGTGCCCTAACTATAGA-ATTTCGCATCATAAATGTACATTTTT-TTTTTTTA--GTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------GTTCTCCTTT-GGTTAAAT----TGT-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATT-C--TTTAA--T---C-ATA---TGT--ACT-TAGGCTATA--ATAA-ATTTGTAAATTTAACAAA----TCT--TTT-CCTTTCAAACAAGAGTG--TAGA---GCATAATCTAGGAA--TG---AC--T-------ACCGAATTTGG--------ACA-----CAACACGG-ACAGAGTAT-GTG-TGTTTCATAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTAT--TTTGACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCAGT-CCCAGCATACCCACATACTTCTTGTTACG
gi|11 : tactgatacatgATTTTA-TT-----ACAGTACTGAATTCAGGCCTTTT-----GGGGAAACAGTTT--AT------AT--TCCTCT-G-----AT----TGT--------ATT--TCCATT----GGCAAA-AAGGATTTA--TT-TTTGCCA--CCAAC--T-TC-C--TT-AA--A---C-CTAACGTGC--GCT-ACTGCTGTA--ATAATATTTTTAAAtt
gi|13 : catagaatactttaAT----TGT--------ATA--TTCATT----GG-AAA-A---GGTTT--TA-TTTGCCAAACCAAC--TATC-C--TTCAA--C---C-ACA---AGT--GCT-ACTGCTGTC--ATCA-ATTTAAAAAAAATACAGATATTTTT--TTT-TATTTCAAACAAA-GTG--aaaaattac
gi|14 : gTATATGTATTTTGTCAGTCTACACCAGT--A-TATTTTGTC-TC---AATTTGACTAATTAGGCTGAGCGCTTATTTATCG---------------------CCTATGGAAAATGAACTTTTCCAGAGATATTCGCTATCTCg
gi|15 : cactgaA--TGAAC--TATT-TCATG-AA--TTCGC-ATT---TGT---CTATATTCAATG--ATAA-ATCTGTGATCTTTACTGG----TGC--TTT-CATTTTAAACAAG-GT
gi|16 : cTG----C-----------TTTTGAGA------GAATG-CC-TAATACT----------TA-TTCAGTCCCCAGCGTACGCACAGACTTTCTGT
gi|2 : ATGTGTTTTGTAAGTCTAC-CC-GTG-AATATTTTTTTCTCT--AATTTGACCGGTTAGGTTGAGCGCTTATTTTTCGTATTTTCTTTGTC-GGTCAGTCTTATGGAAAACGAACTATTTGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----TAGTTTTATACTAAATTTTCATTCTGCCTTGAAATGTATCATTAGGGGTGGGGGGTGA---CATTGGCATTTTAAATGTG------TTTTTTAA--AATACTGTATGGAAGCTCGTTTGTGCCCTAACTGTAGA-ATTTTGCATCATAAATGCACATTTTT-TT-----A--GTA----ATTCTGGTCTTTTATTTTGGGTAAAC--TTT--AC------ATTCTCCTTTTGGTTAAAT----TGC-----TTCATA--TTCACTACA-G--AAA-A---CTTTG--TA-TTTGTTA--TCAAC--TATTGT--TT-AA--T---C-ATA---TGT--ACT-TG-GCTATA--ATAA-ATTTGTAAATTTAAGAAA----TCT--TTT-CCTTTCAAACAAG-GTG--TAGA---GCATAATCTTGGAA--TG---AC--T-------ACCGAATTTGG--------ACA-----CAACACGG-ACATAGTAT-GTG-TGTTTCATAA-A-------GT---ATCTAGTATGATAAGTC-TTTCTGATCCCAAACACTATATT--GACAGTGACTGAGTT--------T-T-C---ATA----C-------------T--TTGTG----C-----------TTT-GAGA------GAA-G-C--TAG-ACT----------TATTTCATT-CCCAGTATACCCACAGGCTTCTTgtgttac
gi|3 : T--AATTTTGATCAATTATTTTGGGCAAAT--TTT--ACGTGTATATTCTTTTCT-GATTATATACACTGTACTCATTCATG--TTCATTTTTAA--AAA-A---TCTTCAACA-TTTGTTA--TCAGT--TATT-C--T--AA--------ATG---TAT--ACT-CATGCTTTA--ATAA-ATTTGTAGACTTTACAAG----TCT--TTTTCATTTCAAACAAA-GTG--TTAA---GTATAATCTGGGAA--TCATGAC--TGTCATTGACTGACTGTGG------GTACAATGTACAACACGG-AGAGAGCA---TG-T--TTCATAA-T-------CC---ATGTAGTATGATAAGTC-CTTTTGATCTAAAGTACTAC--T--GACTGTGAA-AAGTA--------C--------TA----C-------------TGACTGTGACCTC-----------TTT-TGAA------AAA-GACAATAGAACTCATACTTTAGTATGTCAGT-CCCAGCACACTC
gi|4 : GTTTTATACTATATTTTTACTCTGTCTTGAACTGTATCATTGGTGA-AAGGAGTTAACACATTGGTATTTTAAAT-TGTTATTTTCTTTTTATCAATACTGTATGGAAG-TCGTTTGATCCCTAGCTGTAGA-ATTTTGTATCGTAAATGTACAGGTTT-T----------TGT--AATTCTAGCCTTTCATTTTGGGTAAAC--TTT--AC------GTTCTCCtggtcccctttacaattccttgataacgtcatgataaatatatctatgaattggatgcatgtatcaaaaatttgcggtgggacattctaattgacttgtggcccaacagctcaaaacatgatgattgctcaacaaaattgtaatctcttgaactaattatagttttttatgaaatgaatttccgg
gi|4 : -------GT---ATTTAGTATGATAAGTC-TTTCTGATCCCAAACAATAT--T--GACAGTGACTGAGTT--------T-T-T---ATA----C-------------T--TTGTG----G-----------TTT-GGGA------GAA-G-C--TAG-ATT----------GATGTCAGT-ACCGGCATACCCGTAGGCATGTTGTTACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtatttagtatgataagtctttctgatcccaaacaatattgacagtgactgagtttttatactttgtggtttgggagaagctagattgatgtcagtaccggcatacccgtaggcatgttgttacg
gi|5 : gttttatactatatttttactctgtcttgaactgtatcattggtgaaaggagttaacacattggtattttaaattgttattttctttttatcaatactgtatggaagtcgtttgatccctagctgtagaattttgtatcgtaaatgtacaggtttttgtaattctagcctttcattttgggtaaactttacgttctccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAAC--TATTTC--AT-AAATT---C-ATA---TTT--GTC-TGTATTATATGATAA-ATCTATGAACTTTACTGG----TGC--TTT-CATTTTAAACAAG-GTGTATTGA---ACAAAATCTGAAAA--TC---ACA-A-------ACTGAATCTGT------GTACAATGTACAACACGA-A-ACAGTA---TG-T--TTCATGATATGATGATAT---GTGTAGTGAAATAAAAC-ATTTTGATTCCCAGTACCAT--T--GACAG----TGAGTT--------C-G-T---GT-----C-------------G--TAGCA----CATCCGATAGAACTT-GTGA------GAA-T-C--TAG-AGT----------TACTTCAGT---CATCATACT---ACGGTTCCGGTTAC
gi|6 : gGTATGGAAGCTTGTT---------ACTGTC---ATCT----TTAAAAATGTTCTCTTAC-TT---------TATC-AGTTATGGTGAATTAGTTTGA-CAAAT--TTTTTAC------ATTCTTTTCT-GATTAAAC----TAA-----TTCATTGTTTGTTT----G--AAA-T---CTTAC--TA-ATTGTTA--TCAATAATATT-C--TA-AA--T---C-------TAT--ATT-CATTGTTTA--ATAA-ATTTGTAAACTTCACAAG----TCT--TCT-CATTTCATACCAA-GTG----GACAGGAATAA-ATGAGAACTTT---ACAAA-------ACCGAATGTGGAACAATGTACA------AACATAG-AGACGATACAGTGTT--TTCATAA-A-------TTAGAATGTAATATGATAAGCCATTTCTGATCGAAAGTATTAC--T--GATAG----TGAGTT--------C-T-TCTCATAAAGGCAATCGAA------T--TTGAA----C-----------TTT-TGGG------AAA-G-C--TAG-ACT----------TTTTTCAGG-CCCAGCATaatggcttgcttcatcgtcatgatatatatattgacaaaatggacgctggtaccaatacgttttgggaaattatgagcgacattcggcagagatcaacagttcataacattataattactcaacaaaactttgatctttcaatatatagatgttacatgcattttgaaatgaatttccggt
gi|7 : --ATTCTGTTTTTG--A-TCGTGTATTGAAGCTCGATCGT-TCCTAACTTTAGATCTTTCTTATGATG---GTACAT---------------------AATTTTA---TTTTGTCTTGCTTGAA---TTT--A-------ATTCT------GGTTAAAT----TAA-----TTGATT--TTCGT----------------CTT------------------------ATT-C--TT-AAA-C---C-ATA---TTT--ACT-TACGCTATA--ATAA-ATTTCTAAACTTTACAGA----TGT--TTT-CAGTTCAAAGGTG-GTG--TTG--------AATCTAGGAA--TC---AC--T-------ACCAAACCGGG------GT--AG-----AACACGG-ATACCCGGT-GTG-T--TTCAT--------------------------GCGAGCC-CCTTTGATCCTTAGCAC--T--T--GGTACTT-TTAAATTTGGTAAGGC-TGT---AGA----A-------------C--TTGTG----C-----------TCT-GTGA------GAA-G-C--TAC-ACT----------TATTTCAGT-CTCAGCATATACACACGCTTCTTg
gi|8 : aATTTTTATTGC---A--GTACTCAATTCTGGCCTTTTA----GGATACAC--TTT--AT------ATTC--CTCT-GATTA-----------------TATT--TTCATT----G--GAA-A----TGTT--TACTTTGCTA--CCAAC--TGTC-C--TT-AAA-C---C-GCG---TGC--ACT-ACTGCTGTG--AAAA-AAATATAAATTTTA-ACA----TCAAATTT-CAATTCAAACAAG-GTG--GTTA---GCATAATGTTGGAG--TC---AC--T-------ACCCAAACTGA------GT----T---CAACTTGGAA-ATAG--T-GTG-T--CTCAtctgt
gi|9 : ttttacaatgtatggaagactttatttttattacagtacnnnnnnnnnnnncatggaagactttT----TAT-----TT-ATT--TTCATT----G--GAATA---CTAAT--CA-TTCGTTA--TCAAGA-TATT-C--T---A--C---TTATA---TATCGAAT-TATGTTTCA--ATAA-ATTTGTAATAATTGCAGA----TCT--TTT-CATTTCAAGCCAC-ATG--TTGA---TCATGATCTGGGAA--TC---GC--A-------ACCA----TGT------GT---TT---CAA------A-A-----------T--TTAAT---A-------GT---ACT--GTATAATAAGTC-TGTC---TCCC--------------GACAG----TGAGTT--------CAT-T---ACA----CAAAGACGACAGAAC--TTGTA----C-----------TGT-GGGATGGGGGAAA-G-C--TAG-ACT----------TATTTAAGT-CTTAGCGTA-ACACATGTTaag
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): CAGAGATCAACAGTTCATAAAACTTTGATCTTTTAATATATAGATGTTACGTGCATTTTGGAATGAATTTCCGGTCTTCGTCGTTTTCCGTTCTTCAGGAATTTCGAAAAGATAATTAAGAGAAGTGTCAATATCGGAGATCATAAAATGCAAACGAAATACAAATCAAACGTCATGCTGTCAAAATGACAGTGTGACACACAATACCCACCACTTTCAATACAGGAAT
Unaligned ( gi|12 ): CTCTGGTTGCCCTGACATATCCATGTTATTGTTCATGATAAATTACCTATAATTGAACGCATGTATCAAAAATTGATAGTGGGGAAATTCATAGGAATTTGGCAAAGGTCCGCAGTTCAAGGCATGATGACTGCTCACGAGAACTGTAATT