lowQualScore : 22222222 2222222222222222222222222 1111111 1111111111111111 111111111 22222222 1111111 11111111111 222222222222 11 777777777777777777777 333333 1111 222222 44444 111111 1111 5555555555555555555555555555555555555555 1111 1111 11111 111111111111 11
lowQualScore : 0 88888888 5 33 2 33 0 2 55 2 2 33 2 33 5555555555555555555555555 2 0000000 2 2 5 2 5 2 2 2 666 2 8888888888888888 33 77 2 111111111 3 44 11111111 44 0 3 6666 555 2 3 55 1 88888 3 3 3 3333333 4444 0 555 44 44 66666666666 44 77777 3 555555555555 3 7 4 33 5 5 888 999999999999999999999 99 5 0 5 000000 77 77 0 5 77 0000 77 5 5 77 222222 1 999 44444 5 0 555555 2 2 6 5555 99999 8888888888888888888888888888888888888888 5 5 1111 0 66 3 0000 0 2 44444 1 44 1 33 666666666666 1 3333 22 66 1 6666 1 44 3 44 1 88
lowQualScore : . ........ . .. . .. . . .. . . .. . .. ......................... . ....... . . . . . . . . ... . ................ .. .. . ......... . .. ........ .. . . .... ... . . .. . ..... . . . ....... .... . ... .. .. ........... .. ..... . ............ . . . .. . . ... ..................... .. . . . ...... .. .. . . .. .... .. . . .. ...... . ... ..... . . ...... . . . .... ..... ........................................ . . .... . .. . .... . . ..... . .. . .. ............ . .... .. .. . .... . .. . .. . ..
lowQualScore : 2 77777777 3 44 5 44 1 5 99 5 5 44 4 22 8888888888888888888888888 5 3333333 5 5 0 5 0 5 5 5 222 5 7777777777777777 77 33 9 777777777 1 22 88888888 66 7 3 5555 666 7 3 77 3 22222 1 1 1 1111111 2222 2 444 22 22 55555555555 22 77777 1 111111111111 8 8 4 88 0 0 000 555555555555555555555 11 0 2 0 222222 99 99 1 7 99 7777 99 7 7 99 111111 7 444 00000 7 1 888888 5 5 7 0000 33333 2222222222222222222222222222222222222222 7 7 7777 1 99 6 4444 1 0 22222 8 00 5 88 444444444444 6 4444 33 88 7 5555 8 33 6 33 8 44
consensus : ACGTTTCG--C-----GC-CG--A-AA--GGCG-G--TT-AGC-C--CC-A--A---A--T-G--T---T-TCG-C---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--A-TATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--ACCG-A--N--T--TTAAA-AGAT---TTTTAA-AACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTC--AC-----A-AAAC-------N----ATTAACGG-T--G-A-TT-G-AAG-----T---------------AAA-CTA-CCGCC-ATATGGT---ACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGAT--TATT-TT-TAA--TT------TGGAGACATAA-T-GAG--AC-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--A--ATATA-A-----TTG-GGGTA-T-TG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACGT--TNTAG-GN----G-CGAA--TCG-TC--T----------C-G-GAG----CG--AANCGTC-TTT--C-G-GA--GC-G--AA-AC-GTCCCGTTAC
Reference ( gi|7 ) : ACGTTTCG--T-----GC-CG--A-AA--GGCG-G--TT-AGC-C--CC-A--A---A--T-G--T---T-TCA-C---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--A-TATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--ACCA-A--A--T--TTAAA-AGAT---TTTTAA-AACTGTT-TATAATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CAG--A---TTC--AC-----A-AAAC-------T----ATTAATGG-T--G-A-TT-G-AAG-----T------C--------AAA-TTA-CCGCC-ATAT--T---ACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGAT--TATT-TT-TAA--TT------TGGAGACATAA-T-GAG--TA-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--A--ATAT--C-----TTG-GGGTA-C-TG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACAT--TATAG-GT----G-CGAA--TCG-TC--T----------C-G-GAG----CG--AACTGTC-TTT--C-G-GA--GC-G--AA-AT-GTCCCGTTAC
gi|3 : ACGTTTCG--CCCGGGGC-CG--A-AA--GGCG-G--TT-AGC-C-----G--A---A--A-G--T---T--CG-----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TAT-T-TG--A-TATT---------------TGT--C--TTTT-AAT-----------T-AT--ATCG-A--A--T--TTAAA-AGAT---TTTTAA-AACTGTT-TATGAAGC-A---AA-GC-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--AT--TTC--AC-----A-AAAC-------A----ATTAAAGGTT--G-A-TTGG-AAG-----T---------------AAA-CTA-CCGCC-ATGTAGT---ACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGAT--TATT-TT-C-A--TT------TGGAGGAATAA-T-GAG--AC-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--A--ATATA-CATGTATTG-GGGTA-T-TG------------------AATAAAT-GTA---TGGGATGTTAAAAA-TCACATTGTATAG-GT----G-CGAA--TCG-TC--T----------T-G-GAG----C
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGG-C-----GC-CG--A-AA--GTCG-GC-TT-AGC-C--TC-AGAA---A--T-GAGT---TAGCA-----TG-TC-A---A-TG-TTC-TC-TGA-TA-A-T-TATAT-TG--AATATTAT----------T-TTG
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagACGGTTCG--CC----GC-CT--A-A---GGTG----TG-AGC-C--CC-A--A------T-G--T---T-CC------TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TAT-T-TC--A-TATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--ACTG-A--T--T--ATAAA-AAAAAAATTTTAATAACTGTT-TATGATGT-A---AA-AG-T-A-------AA-GG-GATT---TAC--TA--AA--CAA--A---T-----C-----A-ATGC-------T----ACCTACGG-T--G-A-TC-G--AG-----TAAGATGCAAGAAAGAAAA-CTA-CCGCC-ATAgtaaaataatgaagcacaataaatacggattcacacaaattattacgagtgagttgcaagaataatataaattaccgcccatagtactcttactcaaaatctgataatacatctgctgggactgtatttttaatttggagacataatgagctctttaattgcgagatgccaggccgttatataatatgaattggtacttgaaaaatgcatgggatgtgaaatttacattatagagtcgaattgttctggagcgaaacgt
gi|24 : attcgctcccaaacgacgttcgccttgagACGTTTCA--C-----TC-CG--A-AA--GACG-G--TT-CACAC--CG-A--A---A--C-G--A---T-TCG-C---atcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|11 : attacattataggtACGGTTCGG-C-----GC-CG--A-AA--GACGAG--AC-CGC-C--CC-A--ACGAA--T----T---A-TCG-C---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TAT-TCTA--A-TAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTT-G--ATTT--TTGAC-AGAT---TTATA-----TG-T-TATAATGT-A---AACAG-T-A-------GT-GAGAACAGGTCAA---A--AA---GG--AT--TTC--AC-----A-cccg
gi|16 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggACGGTTCGA-C-----GC-CGGTA-AA--GACG-G--TTTAGT-CTCCC-A--AG--A--CAG--T---A-TCG-C---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TAC-T-TGTAA-TAAAAC----------T-TTGT--C--TTTT-catac
gi|20 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctgCGTTTCG--CC----GC-CA--A-AA--GGCG-G--TT-AGC-C--CC-A--A---AAAT-GG-T---T-TCG-C---TA-GC-A-----TG-TTTCTC-TGA-TA-A-T-TAT-T-TG--A-TA--------------T-TTGT--C--TTTtaaaaatc
gi|12 : gtttcgaaagacCGGTTCG--C-----GC-CG--A-AA--GACG-G--TT-CGC-C--CA-A--G---A--T-A--T---A-TCG-----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TAT-T-TT--A-TAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--ACTG-AT-C--T--TTTGA-AGAA---TTTTAA-A--TGTT-AATAATGT------A-AG-T-A-------GT-GA-A-CA---GGA--TA--AA---AG--A---TCC--AC-----A-acagtattaat
gi|10 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgagGTTTCG--C-----GC-CA--A-AA--GGCG-G--TT-AGC-C--CC-A--A---AA-T-G--T---T-TCG-C---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TAT-T-TG--A-TATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--ACCG-A--A--T--TCAAA-AGAT---TTTTAA-AACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAG--TA--AA--CGG--A---TAC--ACCATTTG-AAAC-------T----ATTAACGG-T--G-A-TT-A-AAG-----T---------------AAA-CTA-TGGCC-ATAG--T---ACT--C--TTACTCAAAATCTGATAATtacaagtca
gi|2 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtGTTTCGCCT-----GCACG--A-AAAGGGCG-G--TT-AGC-A--ACGA--A---A--T----T---T-TCG-----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TAC-T-TT--A-CATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--ACCGTG--A--TCTTTAAATAGAT---TTTTAA--ACGGAT-TA-------------------A-------AC-AA-ATCA---CAA--TGCCAA--C----------C--AA-----A-GGGT-------G----ATTGATAG-TAAG-A-TT-A-AAG---------------------AAAGCTA---GCC-ATAT--TGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGAT--AATT-CT-TAA--TT------T-AAGACAGAA---GAGACT--T-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--A--ATGT--A-----TT--TGGTA-T-TG------------------GA-AAAT-GCACCTTAGG-TG-C--GAA-T--CGT--C-TAG-GA----G-CGAA--TCG-TC--T----------T-G-GAG----CG--AAACGTT-TTTTCT-G-GA--GC-G--AA-ACGGTCCCGTTA
gi|13 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaGTTTCG--C-----TC-CC--A-AG--CCCC-G--TT-AGC-C--CC-A--A---AC-T-G--T---T-TCC-CAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAG-T-TT--A-TATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A-CG-A--A--T--TTAAA---AT---TTT--A-AACTTTT-TATGATGT-AAACAA-AGTT-A-------ATAGA-AGCA---CAA--TA--AA--CGG--A----TC--A------A-AAAC-------T----A--ACGGG-T--GCA-TT-G-AAG-----T---------------AAA-CTATCTGCC-ATA
gi|9 : acgtttcctccaagacgattcgctccgaaagaGCTTCG--C-----GC-CG--A-AA--GACA-----T-A----------------A--T----T---A-TCG-C---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TAT-T-TA--A-TAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--ACTG-ATTA--T--TT-GA-AGA----TTTTA-----TGTTCTATAATGTCA---AA-AG-T-AGGCTACTAT-TA---CA---TTA--TA--AA--CAT--AAACTTC--AA-----A-AAAgt
gi|8 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaacgttcgccccagacggtcgcctcgagacgTTCG--C-----GC-CG--A-AA--GGCG-G--TT-AGC-C--CC-A--A---AA-T-G--T---T-TCG-C---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TA--A-TATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--ACCC-A--T--T--TTAAA-AGAT---ATTTAA-AACTGT-----------A---AA-AG-T-A-------AT-AT-AGCA---CAG--TA--AA--GGG--A---TTC--AC-----A-AAACAAATCACTGCCAACCAACGG-TAAG-A-TT-A-AAG------------A--------AAA-CTA-CCGCC-ATGTGAT---ACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGAT--TATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAG--AC-T-CTTTAATTATGaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|14 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggTTCG--C-----TC-CA--A-CA--GACG-G--TT-AGC-C--CC-A--A---AA-T-G--T---T-TCG-C---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-C-TA--A-TTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--ACCG-A--T--T--TTAAA-AGAC---TTTTAA-AACTGCT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--GGG--A---TTC--AC-----A-AAAC-------A----ATTAAT
gi|15 : ttcgctccaaaagacgtttcgctccaggatgaTTCG--C-----GGGCG--AGAA--GACG-GGTTT-AGC-C--CC-A--A---A--TAG--T---A-TCG-C---TA-GC-G---A-T--TGTGTC--GA-TA-----------TG--A-TATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--ACaaatgccaatcaacgg
gi|1 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacggg--A-AA--GGCG-G--TT-AGC-A--CC-A--A---AA-T-G--TATTT-TCG-C---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TAT-T-----A--ATTAGCA--------T-TTGT--C--TTAT-AATA--------TTC-ATTAACCG-A--T--T--TTTAA-A-AT---TTTTAA-A-CGGAT-CACAAAACCA---AA-AA-TCA-------AT-G---GC----CAA--CC--AA--CGGTGA---TT------------GAA-------------GTTAA-------G-A-TT-A-AAG------------A--------AAA-CTA-CTGGC-CTATGGT---ACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGAT--AATTCTT-TAA--TT------TA-AGACAGAAAT-GAG--AACT-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--A--ATGT--A-----TT--GGGTA-T-TGGGGAAAAAAAAAAAAAAAAA-AAAA-AAA---AAAAATGCC--ACA-TTA---------G-GTT---G-CGAA--TCGTTC--T----------T-G-GAG----CC--AAACGTT-TTT--C-G-GA--GC-G--AA-AC-GTCCCGTTggtatgttttgaaaa
gi|17 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa-A--A---A--T-G--T-------AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TAT-T-TA--T-TAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--ACCA-T--T--T--TCAAA-AGAT---TTTTAA-AAAGGGC-TA----GT-A---AA-AG-T-AT------AT-----GCA---CAAGCTA--AA--GGG--A---TTTCAAC-----A-AATC-------A----A--AATGG-
gi|4 : GT-A---AA-A--T-A-------AT-GA-AGCA---CAA--TA--AATACGG--A---TTC--AC-----ACAAAT-------T----ATTACGAG-T--G-AGTT-GCAAGAATAATA-----T--------AAA-TTA-CCGCCCATAG--T---ACT--C--TTACTCAAAATCTGATAA-TA-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C--T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--A--ATATGAA-----TT---GGTA-CTTG------------------AA-AAAT-GCA---TGGGATGTG--AAATTTACAT--TATAGAGT------CGAA--TTG-TT--C----------T-G-GAG----CG--AAatatgccaaccaatcggaagattaagagaaaactacgcgcc
gi|18 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagacgtttcggcgccgaaagtcggcttagcctcagaaatgagttagcatgtcaatgttctctgataattatattgaatattattttg--C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGAT--TATT-TT-TAACTTT------CGGAGACATAA-T-GAG--AC-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCATAT--------TTGCGAGTA-T-TG------------------AA-AAATAGCA----GGGATGTT--AAA-TTATG---TATAG-GTTGTCG-GGGA--TCG-Tacgt
gi|19 : ac-CATC--TGCT---GGGAT--TATT-TTCTAA--TAA-----TAGAGACATAA-TTGAG--AC-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--A--ATATA-T-----TTG-GGGTAGT-TG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACAT--TATAG-GT----G-CGAA--TCG-TC--T----------T-G-GA
gi|22 : tt-TG------------------AA-AAAT-GCA---TGGGATTTT--AAA-TTACAT--TGTAG-GA----G-CGAA--TCG-TCTTT----------T-G-GAG----TG--AAACGTC-
gi|1 : t--AAA-ATACAT--TTT-G-GT----G-CTAA--CCG-CC--TTTTTTTTTTCC-GTGAG----CG--AAAGGTC-TTT--T-G-GA--GC-G--AA-TC-GTCc
gi|9 : gtgcgggacgttcgctccaaaatagttttcgctccaaAA-TTATGTC-TTTCG-GC----G-CGAAG-CCG-TC--T----------C-G-AGG----CG---ACCGTC-T------G-GG--GC-G--AA-cgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|24 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaacgA-TTACAT--TATAG-GT----G-CGAA--TCG-TT--T----------C-G-GTG----TG--AACCGTC-TTT--C-G-GA--GT-G--AA-AC-GTCCCGatcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|5 : -TCACAC--CTTAG-GC----GGCGAA--CCG-TC--T----------C-A-AGG----CG--AAC-GTCGTTT--G-G-GA--GC-G--AA-
gi|14 : aACAT--TTTGG-G-----G-CTAA--CCG-TC--TGT--------T-G-GAG----CG--AATCATC-CT-----G-GA--GC-G--AA-AC-GTCgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|13 : ttcgctccaaaaTGG-GA----G-CGAAACTC--TT--T----------C-G-GAG----CG--AATCGTC-TT-----G-GA--G--G--AA-AC-GTttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : AG-G-----G-CGAA--CCA-TC--T----------G-G-GGG----CG--AAACGTC-TTTT-C-G-GA--G--G--AA-agccccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|10 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaG-GA----G-CGAA--TCA-TC--T----------T-G-GAG----CG--AAAAGTC-TTT--C-G-GA--GC-G--AA-AG-GTCCCGcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|8 : gG-GC----G-CGAA--CCA-TC--T----------C-G-AGG----TG--AAATGTC-TTT--C-G-GA--GC-G--AA-TC-GTCgaaaggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|14 : tgcgggacgtttcgctccaaG-GA----G-CGAA--TCA-TC--C----------T-G-GAG----CG--AAACGTC-TTT--T-G-GA--GC-G--AA-gaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|1 : G-GA----G-CGAA--TCG-TC--T----------T-G-GAG----CGAAAACTA---TTT--T-G-GA--GC-G---A-AC-GTCCCGaacagacggttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|11 : gtgG-GA----G-CGAA--TGG-TC--TACCCC-----C-G-GCG----CC--GCCCGTC-TTT--CGG-GA--GCGG--AA-AA-GTCCCGaaaagacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|23 : gtgG-GA----G-CGAA--TCG-TC--C----------T-A-GAG----CG--AAACGTT-CTT--C-G-GA--GC-G--AA-AC-GTCCCGgaaagacgttttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : g----G-CGAA--CCG-GC--T----------G-G-GCG----C---AAC-GTC-TTT--C-G-GA--GC-G--AA-aaaagacgtttcgcg
gi|16 : gtgggggacttttcgcaacgaagagtttcgcgctagca----G-CGAA--CCG-TC--C----------T-G-GAGGGCTCG--AAC-GTC-TTTT-C-G-GGAGGC-G--AA-AT-ctcgagcggttcgcgccgaaagacggttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|2 : cgcgggacttacgctccaaaagagttttcgcgccaagacGAA--TCG-TC--T----------T-G--AG----CA--AA--GTC-TTT--C-G-GA--GC-G--AAGAC-GTCCCGctctgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|3 : gAA--TCG-TCC-T----------T-G-GCG----AG--AAACGTC-TTT--C-G-GAT-GC-GA-AA-AC-GTCCCGctcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|15 : gtgG-TC--T----------CTG-GCG----CG--CACGTTC-TTT--G-G-GA--GC-G--AA-TA-GTCCCGtctctccgaaagacgtttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|5 : agtg-TC--T----------T-G-GAA----TG--AACATTT-TTC--C-GTGA--GC-GAAAA-AT--TCCCATTACccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|25 : attcgctcccaaacgacgttcgccttgagacggttcgccgcctaaggtgtgagccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatcta----CG--AAACGTC-TTT--C-G-GA--GCAA--AA-AC-GTTCCGc
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC
Unaligned ( gi|21 ): GGGACGTTTTCGCGTCCAAGTACGATTCGCCTGCCAAAGACTGTACGCCCGAGACGGTTGCGCGGCCAAAGGCGGTT
Alignments
lowQualScore : 11111 111111111111111 1111111 2222222222222222 1111111 11111111111 11 3333333333333333 222222222 11 111111 111111 222222222222 333333333333333333 1111 11 1 2222222222222
lowQualScore : 0 8 55555 5 33 2 33 2 55 2 33 2 33 666666666666666 5555 2 1111111 2 2 4 2 4 2 2 666 2222222222222222 33 66 2 99999999 2 33 2 1111111 2 2 6666 2 4 1 2 3333 66666 2 2 2 2 3 3 555 44 44 777 44 6 4444 77777 3 2 0 77777777777 66 4 4 22 4 4 2222222222222222 111111111 4 11 66 66 5 66 888 66 5 5 66 999999 0 777 55 5 5 222222 0 0 5 9999 66 666666666666 8 4 222222222222222222 4 3333 777 4 5555 3 00 2 1 1 44444 1 44 1 33 0000000000000 1 55 1 1 44444 1 3 1 1 1 2
lowQualScore : . . ..... . .. . .. . .. . .. . .. ............... .... . ....... . . . . . . . ... ................ .. .. . ........ . .. . ....... . . .... . . . . .... ..... . . . . . . ... .. .. ... .. . .... ..... . . . ........... .. . . .. . . ................ ......... . .. .. .. . .. ... .. . . .. ...... . ... .. . . ...... . . . .... .. ............ . . .................. . .... ... . .... . .. . . . ..... . .. . .. ............. . .. . . ..... . . . . . .
lowQualScore : 2 0 77777 3 44 5 44 5 99 5 44 4 22 555555555555555 4444 4 5555555 4 4 7 4 7 4 4 888 0000000000000000 22 55 5 77777777 7 77 7 1111111 7 7 0000 9 9 0 9 1111 99999 9 9 9 9 1 1 444 22 22 777 22 2 8888 77777 1 3 5 33333333333 33 0 0 22 4 4 1111111111111111 444444444 4 00 99 99 0 99 888 99 0 0 99 444444 2 111 44 0 0 333333 7 7 7 0000 99 555555555555 9 4 888888888888888888 4 9999 888 4 9999 3 66 6 2 5 77777 5 77 4 44 9999999999999 4 22 5 5 22222 5 1 5 5 9 0
consensus : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC-A--A---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TATT-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-AACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--A-TTC--AC-----A-AAACNATT-----------AAC-G-G-T--G-A-TT-G--------------AAG-------N-AAACTA-CCGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-A-----NTTG-GGGTA-TT-G------------------AA-AAAT----GCA---TGG-GATGTT--AAA-TTACGT--TNTNG-G----NG-CGAA--TCG-TC--T----------C--G-GAGCGAAA-CGTC-T-TT--C-GGA-GC-G-AA-A-C-GTCCCGTTAC
Reference ( family-3333 ) : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC-A--A---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TATT-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-N-T-TTAAA-AGAT---TTTTAA-AACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--A-TTC--AC-----A-AAACNATT-----------AAC-G-G-T--G-A-TT-G--------------AAG-------T-AAACTA-CCGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-A-----ATTG-GGGTA-TT-G------------------AA-AAAT----GCA---TGG-GATGTT--AAA-TTACGT--TNTAG-G----NG-CGAA--TCG-TC--T----------C--G-GAGCGAAN-CGTC-T-TT--C-GGA-GC-G-AA-A-C-GTCCCGTTAC
gi|1 : T--TTT-G-G----AG-CGAA--TCG-TC--T----------T--G-GAGCGAAA-ACTA-T-TT--T-GGA-GC-G--A-A-C-GTCCCG
gi|1 : gtg-G----AG-CGAA--AGG-TC--T----------TTTG-GAGCGAAT-CGTC-T-T-----GGA-GC-G-AA-A-gacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagt--AAA-ATACAT--TTT-G-G----TG-CTAA--CCG-CC--TTTTTTTTTTCC--GTGAGCGAAA-GGTC-T-TT--T-GGA-GC-G-AA-T-C-GTCacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagttttcgctccaa--A-AA--GGCG-G--TT-AGCA--CC-A--A---AA-T-G-TATTTTCGC---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TATT-----A-ATTAGCA--------T-TTGT--C--TTAT-AATA--------TTC-ATTAAC-CG---A-T-T-TTTAA-A-AT---TTTTAA-A-CGGAT-CACAAAACCA---AA-AA-TCA-AT-G---GC----CAA--CC--AA--CGGTGA-TTG--A------------AGTT-----------AA---------G-A-TT-A--------------AAG-------A-AAACTA-CTGGCCTAT-GGTACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGATA--ATTCTT-TAA--TT------TA-AGACAGAAAT-GAGAAC-T-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--AATGT-------ATT--GGGTA-TT-GGGGAAAAAAAAAAAAAAAAA-AAAA----AAA---AAA-AATGCC--ACA-TTAGGT--T-----------G-CGAA--TCGTTC--T----------T--G-GAGCCAAA-CGTT-T-TT--C-GGA-GC-G-AA-A-C-GTCCCGTTcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|10 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa--TTTCG-G----AG-CGAA--TCA-TC--T----------T--G-GAGCGAAA-AGTC-T-TT--C-GGA-GC-G-AA-A-G-GTCCCG
gi|10 : gT--TTT-G-G----CG-CGAA--ACA-CC--TTT--------C--G-GAGCGAAT-CATC-T-T-----GGA-GC-G-AA-A-A-GTCggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaaACAT--TTT-G-G----GG-CTAA--CCG-CC--T----------TTTG-GCGCGAAA-CACC-T-TT--C-GGA-GC-G-AA-T-C-ATCggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaagacttttcgctccaaGTTTCG-C-----GC-CA--A-AA--GGCG-G--TT-AGCC--CC-A--A---AA-T-G-T---TTCGC---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TATT-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-A-T-TCAAA-AGAT---TTTTAA-AACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAG--TA--AA--CGG--A-TAC--ACCATTTG-AAACTATT-----------AAC-G-G-T--G-A-TT-A--------------AAG-------T-AAACTA-TGGCCATA---GTACT--C--TTACTCAAAATCTGATAATttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|11 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtACGTC-TTTCG-G----AG-CGAA--TGG-TC--TACCCC-----C--G-GCGCCGCC-CGTC-T-TT--CGGGA-GCGG-AA-A-A-GTCCCG
gi|11 : gtgGCGAAAACGTC-T-TT--C-GGA-GC-G-AA-tttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|11 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccaACGGTTCGGC-----GC-CG--A-AA--GACGAG--AC-CGCC--CC-A--ACGAA--T---T---ATCGC---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TATTCTA--ATAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTTG---ATT-T-TTGAC-AGAT---TTATA-----TG-T-TATAATGT-A---AACAG-T-A-GT-GAGAACAGGTCAA---A--AA---GG--ATTTC--AC-----A-ggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggG-A----GG-CGAA--CCG-GC--T---------------GGGCGCAA-CGTC-T-TT--C-GGA-GC-G-AA-catac
gi|12 : gtgggggacttttcgcaacgaagagtttcgcgctagcaCGGTTCG-C-----GC-CG--A-AA--GACG-G--TT-CGCC--CA-A--G---A--T-A-T---ATCG----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TATT-TT--ATAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--AC-TG---ATC-T-TTTGA-AGAA---TTTTAA-A--TGTT-AATAATGT------A-AG-T-A-GT-GA-A-CA---GGA--TA--AA---AG--A-TCC--AC-----A-gagcggttcgcgccgaaagacggttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|13 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgagTGG-G----AG-CGAAACTC--TT--T----------C--G-GAGCGAAT-CGTC-T-T-----GGA-G--G-AA-A-C-GTtacaagtca
gi|13 : GTTTCG-C-----TC-CC--A-AG--CCCC-G--TT-AGCC--CC-A--A---AC-T-G-T---TTCCCAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAGT-TT--ATATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A--CG---A-A-T-TTAAA---AT---TTT--A-AACTTTT-TATGATGT-AAACAA-AGTT-A-ATAGA-AGCA---CAA--TA--AA--CGG--A-T-----C-----A-AAA--ACT-----------AACGG-G-T--GCA-TT-G--------------AAG-------T-AAACTATCTGCCATAagccccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|14 : acgtttcctccaagacgattcgctccgaaagaCGTC-TGTTG-G----AG-CGAA--TCA-TC--C----------T--G-GAGCGAAA-CGTC-T-TT--T-GGA-GC-G-AA-gt
gi|14 : ACAT--TTT-G-G----GG-CTAA--CCG-TC--TGT--------T--G-GAGCGAAT-CATC-C-T-----GGA-GC-G-AA-A-C-GTCgttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|14 : ttcgctccaaaaTTCG-C-----TC-CA--A-CA--GACG-G--TT-AGCC--CC-A--A---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TATC-TA--ATTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAC---TTTTAA-AACTGCT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--GGG--A-TTC--AC-----A-AAACAATT-----------AAttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : ttcgctccaaaagacgtttcgctccaggatgaCGT--CCTCGAG----GG-CGAA--CCA-TC--T----------G--G-GGGCGAAA-CGTC-TTTT--C-GGA-G--G-AA-taaatgccaatcaacgg
gi|15 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaTTCG-C-----GGGCG--AGAA--GACG-GGTTT-AGCC--CC-A--A---A--TAG-T---ATCGC---TA-GC-G---A-T--TGTGTC--GA-TA----------TG--ATATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--AC-GGTATG-T-T-TTGAA-Aggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|16 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacgggACGGTTCGAC-----GC-CGGTA-AA--GACG-G--TTTAGTCTCCC-A--AG--A--CAG-T---ATCGC---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TACT-TGTAATAAAAC----------T-TTGT--C--TTTT-a
gi|17 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctg-A--A---A--T-G-T-----AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TATT-TA--TTAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--AC-CA---T-T-T-TCAAA-AGAT---TTTTAA-AAAGGGC-TA----GT-A---AA-AG-T-ATAT-----GCA---CAAGCTA--AA--GGG--A-TTTCAAC-----A-AATCAA-------------AAT-G-G-taaaaatc
gi|18 : --C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGATT--ATT-TT-TAACTTT------CGGAGACATAA-T-GAGA-C-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCAT-A-----TTTGCGAGTA-TT-G------------------AA-AAATA---GCA----GG-GATGTT--AAA-TTATG---TATAG-GTTGTCG-GGGA--TCG-Tatatgccaaccaatcggaagattaagagaaaactacgcgcc
gi|19 : ac-CATC--TGCT---GGGATT--ATT-TTCTAA--TAA-----TAGAGACATAA-TTGAGA-C-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--AATAT-A-----TTTG-GGGTAGTT-G------------------AA-AAAT----GCA---TGG-GATGTT--AAA-TTACAT--TATAG-G----TG-CGAA--TCG-TC--T----------T--G-GA
gi|2 : ttGAA--TCG-TC--T----------T--G--AGCAAA---GTC-T-TT--C-GGA-GC-G-AAGA-C-GTCCCG
gi|2 : gGTTTCG-CCT---GCACG--A-AAAGGGCG-G--TT-AGCA--ACGA--A---A--T---T---TTCG----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TACT-TT--ACATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--AC-CGTG-A-TCT-TTAAATAGAT---TTTTAA-A-CGGAT-TA-------------------A-AC-AA-ATCA---CAA--TGCCAA--C--------C--AA-----A-GGGTGATT-----------GAT-A-G-TAAG-A-TT-A--------------AAG-------A-AAGCTA---GCCATATTGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGATA--ATT-CT-TAA--TT------T-AAGACAGAA---GAGA-CTT-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--AATGT-A-----TTT---GGTA-TT-G------------------GA-AAAT----GCACCTTAG-G-TG-C--GAA-T--CG---TCTAG-G----AG-CGAA--TCG-TC--T----------T--G-GAGCGAAA-CGTT-T-TTTCT-GGA-GC-G-AA-A-CGGTCCCGTTActcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|20 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaCGTTTCG-CC----GC-CA--A-AA--GGCG-G--TT-AGCC--CC-A--A---AAAT-GGT---TTCGC---TA-GC-A-----TG-TTTCTC-TGA-TA-A-T-TATT-TG--ATA--------------T-TTGT--C--TTT
gi|22 : gtttcgaaagac-TT-G------------------AA-AAAT----GCA---TGG-GATTTT--AAA-TTACAT--TGTAG-G----AG-CGAA--TCG-TCTTT----------T--G-GAGTGAAA-CGTC-acagtattaat
gi|23 : ACGTC-TTTTG-G----AG-CGAA--TCG-TC--C----------T--A-GAGCGAAA-CGTT-C-TT--C-GGA-GC-G-AA-A-C-GTCCCGc
gi|24 : gA-TTACAT--TATAG-G----TG-CGAA--TCG-TT--T----------C--G-GTGTGAAC-CGTC-T-TT--C-GGA-GT-G-AA-A-C-GTCCCGttcgcg
gi|25 : CGAAA-CGTC-T-TT--C-GGA-GCAA-AA-A-C-GTTCCG
gi|3 : agtgACGTC-TTTCG-G----AG-AGAAA-TCG-TCC-T----------T--G-GCGAGAAA-CGTC-T-TT--C-GGATGC-GAAA-A-C-GTCCCG
gi|3 : gtg--TCG-GC--C----------C--C-GGGCGAAA-CGTC-T-TT--C-GGA-GA-G-AA-ATC-GTCCttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|3 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaACGTTTCG-CCCGGGGC-CG--A-AA--GGCG-G--TT-AGCC-----G--A---A--A-G-T---T-CG----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TATT-TG--ATATT---------------TGT--C--TTTT-AAT-----------T-AT--AT-CG---A-A-T-TTAAA-AGAT---TTTTAA-AACTGTT-TATGAAGC-A---AA-GC-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--ATTTC--AC-----A-AAACAATT-----------AAA-G-GTT--G-A-TTGG--------------AAG-------T-AAACTA-CCGCCATGT-AGTACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGATT--ATT-TT-C-A--TT------TGGAGGAATAA-T-GAGA-C-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--AATAT-ACATGTATTG-GGGTA-TT-G------------------AATAAAT----GTA---TGG-GATGTTAAAAA-TCACATTGTATAG-G----TG-CGAA--TCG-TC--T----------T--G-GAGCaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGGC-----GC-CG--A-AA--GTCG-GC-TT-AGCC--TC-AGAA---A--T-G-------AGT---TA-GC-A----------TGTC------A-A-T-------------------------------GT--T--CTCT-GATA--------ATT-AT--AT-TG---A-A-T----------------------ATTATT-T-TG--GT-A---AA-A--T-A-AT-GA-AGCA---CAA--TA--AATACGG--A-TTC--AC-----ACAAATTATT-----------A-C-GAG-T--G-AGTT-GC-------------AAGAATAATAT-AAATTA-CCGCC-CAT-AGTACT--C--TTACTCAAAATCTGATAAT-A-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C-T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--AATATGA-----ATT---GGTACTT-G------------------AA-AAAT----GCA---TGG-GATGTG--AAATTTACAT--TATAG-A----GT-CGAA--TTG-TT--C----------T--G-GAGCGAAA-CGT
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaag-TCACAC--CTTAG-G----CGGCGAA--CCG-TC--T----------C--A-AGGCGAA--CGTCGT-TT--G-GGA-GC-G-AA-
gi|5 : aACGGTTCG-CC----GC-CT--A-A---GGTG----TG-AGCC--CC-A--A------T-G-T---TCC-----TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TATT-TC--ATATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--AC-TG---A-T-T-ATAAA-AAAAAAATTTTAATAACTGTT-TATGATGT-A---AA-AG-T-A-AA-GG-GATT---TAC--TA--AA--CAA--A-T-----C-----A-ATGCTACC-----------TAC-G-G-T--G-A-TC-GAGTAAGATGCAAGAAAG-------A-AAACTA-CCGCCATAgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|7 : attcgctcccaaacgacgttcgccttgagACGTTTCG-T-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC-A--A---A--T-G-T---TTCAC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TATT-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CA---A-A-T-TTAAA-AGAT---TTTTAA-AACTGTT-TATAATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CAG--A-TTC--AC-----A-AAACTATT-----------AAT-G-G-T--G-A-TT-G--------------AAG-------TCAAATTA-CCGCCATAT---TACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGT-A-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-------CTTG-GGGTA-CT-G------------------AA-AAAT----GCA---TGG-GATGTT--AAA-TTACAT--TATAG-G----TG-CGAA--TCG-TC--T----------C--G-GAGCGAAC-TGTC-T-TT--C-GGA-GC-G-AA-A-T-GTCCCGTTACatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|8 : --TCTCG-A----GG-TGAA--ATG-TC--TTT--------C--G-GAGCGAAT-CGTC-T-T-----GGA-GC-G-AA-A-C-GTCCCG
gi|8 : tg--TTTCG-G----CG-CGAA--CCA-TC--T----------C--G-AGGTGAAA-TGTC-T-TT--C-GGA-GC-G-AA-T-C-GTCtggttcgcgccgaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|8 : tgcgggacgtttcgctccaaTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC-A--A---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TATT-TA--ATATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--AC-CC---A-T-T-TTAAA-AGAT---ATTTAA-AACTGT-----------A---AA-AG-T-A-AT-AT-AGCA---CAG--TA--AA--GGG--A-TTC--AC-----A-AAACAAATCACTGCCAACCAAC-G-G-TAAG-A-TT-A--------------AAG-------A-AAACTA-CCGCCATGT-GATACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGATT--ATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAGA-C-T-CTTTAATTATGggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|9 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggTT-T--AT--TAAAT-A-----ATT-----TA-TCAG------------------AC-AAACACTCGCG---TAGCGAT------AA-TTATGTC-TTTCG-G----CG-CGAAG-CCG-TC--T----------C--G-AGGCG-AC-CGTC-T-------GGG-GC-G--A-A-C-GT
gi|9 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaGCTTCG-C-----GC-CG--A-AA--GACA-----T-A---------------A--T---T---ATCGC---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TATT-TA--ATAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--AC-TG---A-T-TATTTGA-AGA----TTTTA-----TGTTCTATAATGTCA---AA-AG-T-A-actagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC
Unaligned ( gi|21 ): GGGACGTTTTCGCGTCCAAGTACGATTCGCCTGCCAAAGACTGTACGCCCGAGACGGTTGCGCGGCCAAAGGCGGTT
Alignments
lowQualScore : 11111 1111111111 111111111111 11111111 111111111111 2222222222222222222222222222222222222 2222222222222222 1111111 11 111111 111111 1111 222222222222 1 333333333333333333 11 1111111111111
lowQualScore : 0 8 55555 5 33 2 33 2 55 2 33 55 7777777777 5555 6666 2 8888888 2 2 4 2 4 2 2 2 777 2 555555555555 33 66 2 00000000 2 33 2 9999999 2 2 555 2 77 1 2 3333 66666 2 2 2 2 3 3 555 44 44 777 44 9 3 222222222222 3 1111111111111111111111111111111111111 4 4 9999999999999999 4 55 3333333 444 11 66 66 5 66 888 66 5 5 66 999999 0 777 55 5 5 222222 0 0 5 1111 77 111111111111 0 666666666666666666 5 5 9999 66 3 00 2 2 1 44444 1 44 2 33 9999999999999 1 11 2222 33 1 33 3 11 1 11 1 2 1 1 1 1
lowQualScore : . . ..... . .. . .. . .. . .. .. .......... .... .... . ....... . . . . . . . . ... . ............ .. .. . ........ . .. . ....... . . ... . .. . . .... ..... . . . . . . ... .. .. ... .. . . ............ . ..................................... . . ................ . .. ....... ... .. .. .. . .. ... .. . . .. ...... . ... .. . . ...... . . . .... .. ............ . .................. . . .... .. . .. . . . ..... . .. . .. ............. . .. .... .. . .. . .. . .. . . . . . .
lowQualScore : 2 0 77777 3 44 5 44 5 99 5 44 66 9999999999 6666 8888 4 6666666 4 4 7 4 7 4 4 4 666 8 444444444444 44 99 7 44444444 9 99 9 9999999 9 9 444 9 88 0 9 1111 99999 9 9 9 9 1 1 444 22 22 777 22 2 5 333333333333 1 5555555555555555555555555555555555555 0 0 5555555555555555 0 00 0000000 666 00 99 99 0 99 888 99 0 0 99 444444 2 111 44 0 0 333333 7 7 7 6666 99 666666666666 0 999999999999999999 0 0 1111 11 3 99 4 8 3 33333 3 22 5 11 9999999999999 2 66 6666 88 2 00 9 88 3 88 3 7 4 4 7 7
consensus : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--A-TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-A-----TTTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACGT--TTTCG-G----NG-CGAA--TCG-TC--T----------C--G-G-AG----CGAAA-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
Reference ( family-3333 ) : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--A-TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-NA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-A-----NTTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACGT--TNTNG-G----NG-CGAA--TCG-TC--T----------C--G-G-AG----CGAAA-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
gi|1 : --TTTTG-G----AG-CGAA--TCG-TC--T----------T--G-G-AG----CGAAA-AC-T--A-TTT--T-GG--A-GC-G--A-A-C-GTCCCG
gi|1 : gtg--AAA-ATACAT--TTT-G-G----TG-CTAA--CCG-CC--TTTTTTTTTTCC--GTG-AG----CGAAA-GG-T--C-TTT--T-GG--A-GC-G-AA-T-C-GTCgacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagttttcgctccaa--A-AA--GGCG-G--TT-AGCA--CC--AA---AA-T-G-TATTTTCGC---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TAT-T-----A-ATTAGCA--------T-TTGT--C--TTAT-AATA--------TTC-ATTAAC-CG---A-T-T-TTTAA-A-AT---TTTTAA-A--CGGAT-CACAAAACCA---AA-AA-TCA-AT-G---GC----CAA--CC--AA--CGGTGA-TTGA---------------------------AGTT-----------AA----------G-A-TT-A--------------A-AG-AA-------AACTA-C-TGGCCTAT-GGTACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGATA--ATTCTT-TAA--TT------TA-AGACAGAAAT-GAGAAC-T-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--AATGT-A-----TT---GGGTA-TTGGGGAAAAAAAAAAAAAAAAA-AAAA-AAA---AAAAATGCC--ACA-TTAGGT--T-----------G-CGAA--TCGTTC--T----------T--G-G-AG----CCAAA-CG-T--T-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|10 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa--TTTCG-G----AG-CGAA--TCA-TC--T----------T--G-G-AG----CGAAA-AG-T--C-TTT--C-GG--A-GC-G-AA-A-G-GTCCCG
gi|10 : g--TTTTG-G----GG-CTAA--CCG-CC--T----------TTTG-G-CG----CGAAA-CA-C--C-TTT--C-GG--A-GC-G-AA-T-C-ATCggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaagacttttcgctccaaGTTTCG-C-----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-A-T-TCAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAG--TA--AA--CGG--A-TACA------CCATTTG-AAA---------CTATT-----------AA-C-G-G-T--G-A-TT-A--------------A-AG-TA-------AACTA-T-GGCCATA---GTACT--C--TTACTCAAAATCTGATAATtgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|11 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtACGTC-TTTCG-G----AG-CGAA--TGG-TC--TACCCC-----C--G-G-CG----CCGCC-CG-T--C-TTT--CGGG--A-GCGG-AA-A-A-GTCCCG
gi|11 : gtgG----CGAAAACG-T--C-TTT--C-GG--A-GC-G-AA-tttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|11 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccaACGGTTCGGC-----GC-CG--A-AA--GACGAG--AC-CGCC--CC--AACGAA--T---T---ATCGC---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TAT-TCTA--ATAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTTG---ATT-T-TTGAC-AGAT---TTATA------TG-T-TATAATGT-A---AACAG-T-A-GT-GAGAACAGGTCAA---A--AA---GG--ATTTCA------C-----A-ggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggACGTC-TTTCG-G----AG-CGAA--T-G--C--T-------------A-G-CG----CGAAA-C--T--C--TT--C-GT--T-GC-G-AA-A-A-GTCCCcatac
gi|12 : gtggTCG-A----GG-CGAA--CCG-GC--T---------------G-GG----CGCAA-CG-T--C-TTT--C-GG--A-GC-G-AA-tgcgcccagccggttcgcctcgagcggttcgcgccgaaagacggttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|12 : gtgggggacttttcgcaacgaagagtttcgcgctagcaCGGTTCG-C-----GC-CG--A-AA--GACG-G--TT-CGCC--CA--AG---A--T-A-T---ATCG----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TAT-T-TT--ATAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--AC-TG---A-TCT-TTTGA-AGAA---TTTTAA-A---TGTT-AATAATGT------A-AG-T-A-GT-GA-A-CA---GGA--TA--AA---AG--A-TCCA------C-----A-gcggttcgcgccgaaagacggttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|13 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgagTGG-G----AG-CGAAACTC--TT--T----------C--G-G-AG----CGAAT-CG-T--C-TT-----GG--A-G--G-AA-A-C-GTtacaagtca
gi|13 : --G-G-AG----CGAAA-C--T--C-TTT--C-GG--A-GC-G-AA-T-C-GTCagccccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|13 : acgtttcctccaaGTTTCG-C-----TC-CC--A-AG--CCCC-G--TT-AGCC--CC--AA---AC-T-G-T---TTCCCAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAG-T-TT--ATATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A--CG---A-A-T-TTAAA---AT---TTT--A-A-ACTTTT-TATGATGT-AAACAA-AGTT-A-ATAGA-AGCA---CAA--TA--AA--CGG--A-T---------C-----A-AAA-----------ACT-----------AA-CGG-G-T--GCA-TT-G--------------A-AG-TA-------AACTATC-TGCCATAcaagccccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|14 : acgtttcctccaagacgattcgctccgaaagaCGTC-TGTTG-G----AG-CGAA--TCA-TC--C----------T--G-G-AG----CGAAA-CG-T--C-TTT--T-GG--A-GC-G-AA-gt
gi|14 : --TTTTG-G----GG-CTAA--CCG-TC--TGT--------T--G-G-AG----CGAAT-CA-T--C-CT-----GG--A-GC-G-AA-A-C-GTCgttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|14 : ttcgctccaaaaTTCG-C-----TC-CA--A-CA--GACG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-C-TA--ATTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAC---TTTTAA-A-ACTGCT-TATGATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--GGG--A-TTCA------C-----A-AAA---------CAATT-----------AA-tgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : ttcgctccaaaagacgtttcgctccaggatgaT--TTTCG-G----AG--GAA--TGGGTC--T----------CT-G-G-CG----CGCA--CG-TT-C-TTT--G-GG--A-GC-G-AA-T-A-GTCCCGtaaatgccaatcaacgg
gi|15 : agtgCGT--CCTCGAG----GG-CGAA--CCA-TC--T----------G--G-G-GG----CGAAA-CG-T--CTTTT--C-GG--A-G--G-AA-gacgtttcgcccccagatggttcgccctcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|15 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaTTCG-C-----GGGCG--AGAA--GACG-GGTTT-AGCC--CC--AA---A--TAG-T---ATCGC---TA-GC-G---A-T--TGTGTC--GA-TA-----------TG--ATATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--AC-GGTATG-T-T-TTGAA-Aggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|16 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacgggG-A----GG-CGAA--CCG-TC--C----------T--G-G-AGGGCTCGAA--CG-T--CTTTT--C-GGGAG-GC-G-AA-A-T-a
gi|16 : cgcgggacttacgctccaaaagagttttcgcgccaagacACGGTTCGAC-----GC-CGGTA-AA--GACG-G--TTTAGTCTCCC--AAG--A--CAG-T---ATCGC---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TAC-T-TGTAATAAAAC----------T-TTGT--C--TTTT-tgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|17 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctg--AA---A--T-G-T-----AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TAT-T-TA--TTAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--AC-CA---T-T-T-TCAAA-AGAT---TTTTAA-A-AAGGGC-TA----GT-A---AA-AG-T-ATAT-----GCA---CAAGCTA--AA--GGG--ATTTCAACAAATC-----A-AAATGGATATGCCAACC-----------AATC-G-GAA--G-A-TT-A--------------AGAG-AA-------AACTA-CGCGCCtaaaaatc
gi|18 : --C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGATT--ATT-TT-TAACTTT------CGGAGACATAA-T-GAGA-C-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCAT-A-----TTTGCGAGTA-TTG------------------AA-AAATAGCA----GGGATGTT--AAA-TTATG---TATAG-GTTGTCG-GGGA--TCG-T
gi|19 : ac-CATC--TGCT---GGGATT--ATT-TTCTAA--TAA-----TAGAGACATAA-TTGAGA-C-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--AATAT-A-----TTTG-GGGTAGTTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACAT--TATAG-G----TG-CGAA--TCG-TC--T----------T--G-G-A
gi|2 : ttGAA--TCG-TC--T----------T--G---AG----CAAA---G-T--C-TTT--C-GG--A-GC-G-AAGA-C-GTCCCG
gi|2 : gGTTTCG-CCT---GCACG--A-AAAGGGCG-G--TT-AGCA--ACG-AA---A--T---T---TTCG----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TAC-T-TT--ACATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--AC-CGTG-A-TCT-TTAAATAGAT---TTTTAA-A--CGGAT-TA-------------------A-AC-AA-ATCA---CAA--TGCCAA--C--------CA------A-----A-GGG---------TGATT-----------GA-T-A-G-TAAG-A-TT-A--------------A-AG-AA-------AGCTA----GCCATATTGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGATA--ATT-CT-TAA--TT------T-AAGACAGAA---GAGA-CTT-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--AATGT-A-----TTT---GGTA-TTG------------------GA-AAAT-GCACCTTAGG-TG-C--GAA-T--CG---TCTAG-G----AG-CGAA--TCG-TC--T----------T--G-G-AG----CGAAA-CG-T--T-TTTTCT-GG--A-GC-G-AA-A-CGGTCCCGTTActcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|20 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaCAT--TTTTG-G----GG-CTAA--CCG-CC--T----------TTTG-GCGG----CGAAA-CGGT--C-TTT--C-GA--A-AC-
gi|20 : CGTTTCG-CC----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AAAT-GGT---TTCGC---TA-GC-A-----TG-TTTCTC-TGA-TA-A-T-TAT-T-TG--ATA--------------T-TTGT--C--TTTgtttcgctagcatgtttctctgataattatttgatatttgtctttacagtattaat
gi|22 : gtttcgaaagac-TTG------------------AA-AAAT-GCA---TGGGATTTT--AAA-TTACAT--TGTAG-G----AG-CGAA--TCG-TCTTT----------T--G-G-AG----TGAAA-CG-T--C-acagtattaat
gi|23 : ACGTC-TTTTG-G----AG-CGAA--TCG-TC--C----------T--A-G-AG----CGAAA-CG-T--T-CTT--C-GG--A-GC-G-AA-A-C-GTCCCGc
gi|24 : gA-TTACAT--TATAG-G----TG-CGAA--TCG-TT--T----------C--G-G-TG----TGAAC-CG-T--C-TTT--C-GG--A-GT-G-AA-A-C-GTCCCGttcgcg
gi|25 : ----CGAAA-CG-T--C-TTT--C-GG--A-GCAA-AA-A-C-GTTCCG
gi|3 : agtgACGTC-TTTCG-G----AG-AGAAA-TCG-TCC-T----------T--G-G-CG----AGAAA-CG-T--C-TTT--C-GG--ATGC-GAAA-A-C-GTCCCG
gi|3 : gtg--TCG-GC--C----------C--C-G-GG----CGAAA-CG-T--C-TTT--C-GG--A-GA-G-AA-ATC-GTCCttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|3 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaACGTTTCG-CCCGGGGC-CG--A-AA--GGCG-G--TT-AGCC------GA---A--A-G-T---T-CG----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TAT-T-TG--ATATT---------------TGT--C--TTTT-AAT-----------T-AT--AT-CG---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGAAGC-A---AA-GC-T-A-AT-GA-AGCA---CAA--TA--AA--CGG--ATTTCA------C-----A-AAA---------CAATT-----------AA-A-G-GTT--G-A-TTGG--------------A-AG-TA-------AACTA-C-CGCCATGT-AGTACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGATT--ATT-TT-C-A--TT------TGGAGGAATAA-T-GAGA-C-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--AATAT-ACATGTATTG-GGGTA-TTG------------------AATAAAT-GTA---TGGGATGTTAAAAA-TCACATTGTATAG-G----TG-CGAA--TCG-TC--T----------T--G-G-AG----Caaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGGC-----GC-CG--A-AA--GTCG-GC-TT-AGCC--TCAGAA---A--T-GAG---TTAGCA--TG-TC-A---A-TG-TTC-TC-TGA-TA-A-T-TATAT-TGA-ATATTAT----------T-TTG
gi|4 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagTTGA-ATATTATT-T-TG--GT-A---AA-A--T-A-AT-GA-AGCA---CAA--TA--AATACGG--A-TTCA------C-----ACAAA---------TTATT-----------A--C-GAG-T--G-AGTT-GC-------------A-AG-AATAATATAAATTA-C-CGCC-CAT-AGTACT--C--TTACTCAAAATCTGATAAT-A-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C-T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--AATATGA-----ATT---GGTACTTG------------------AA-AAAT-GCA---TGGGATGTG--AAATTTACAT--TATAG-A----GT-CGAA--TTG-TT--C----------T--G-G-AG----CGAAA-CG-T--gtaaaataatgaagcacaataaatacggattcacacaaattattacgagtgagttgcaagaataatataaattaccgcccatagtactcttactcaaaatctgataatacatctgctgggactgtatttttaatttggagacataatgagctctttaattgcgagatgccaggccgttatataatatgaattggtacttgaaaaatgcatgggatgtgaaatttacattatagagtcgaattgttctggagcgaaacgt
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagacgtttcggcgccgaaagtcggcttagcctcagaaatgagttagcatgtcaatgttctctgataattata-TCACAC--CTTAG-G----CGGCGAA--CCG-TC--T----------C--A-A-GG----CGAA--CG-T--CGTTT--G-GG--A-GC-G-AA-
gi|5 : aACGGTTCG-CC----GC-CT--A-A---GGTG----TG-AGCC--CC--AA------T-G-T---TCC-----TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TAT-T-TC--ATATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--AC-TG---A-T-T-ATAAA-AAAAAAATTTTAATA-ACTGTT-TATGATGT-A---AA-AG-T-A-AA-GG-GATT---TAC--TA--AA--CAA--A-T---------C-----A-ATG---------CTACC-----------TA-C-G-G-T--G-A-TC-GAGTAAGATGCAAGAA-AG-AA-------AACTA-C-CGCCATAgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|7 : attcgctcccaaacgacgttcgccttgagACGTTTCG-T-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCAC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CA---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATAATGT-A---AA-AG-T-A-AT-GA-AGCA---CAA--TA--AA--CAG--A-TTCA------C-----A-AAA---------CTATT-----------AA-T-G-G-T--G-A-TT-G--------------A-AGTCA-------AATTA-C-CGCCATAT---TACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGT-A-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT-------CTTG-GGGTA-CTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACAT--TATAG-G----TG-CGAA--TCG-TC--T----------C--G-G-AG----CGAAC-TG-T--C-TTT--C-GG--A-GC-G-AA-A-T-GTCCCGTTACatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|8 : --TCTCG-A----GG-TGAA--ATG-TC--TTT--------C--G-G-AG----CGAAT-CG-T--C-TT-----GG--A-GC-G-AA-A-C-GTCCCG
gi|8 : tg--TTTCG-G----CG-CGAA--CCA-TC--T----------C--G-A-GG----TGAAA-TG-T--C-TTT--C-GG--A-GC-G-AA-T-C-GTCtggttcgcgccgaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|8 : tgcgggacgtttcgctccaaTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TA--ATATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--AC-CC---A-T-T-TTAAA-AGAT---ATTTAA-A-ACTGT-----------A---AA-AG-T-A-AT-AT-AGCA---CAG--TA--AA--GGG--A-TTCA------C-----A-AAA---------CAAATCACTGCCAACCAA-C-G-G-TAAG-A-TT-A--------------A-AG-AA-------AACTA-C-CGCCATGT-GATACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGATT--ATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAGA-C-T-CTTTAATTATGggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|9 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggACGT--TTTCG------AG-CGA---TGG-CT--T----------T--G-G--G----CGAAA-CG-TTGC-TTT--T-GG--G-GC-G-AA-A-A-GTCCCG
gi|9 : cgtgAA-TTATGTC-TTTCG-G----CG-CGAAG-CCG-TC--T----------C--G-A-GG----CG-AC-CG-T--C-T------GG--G-GC-G--A-A-C-GTtcgccccagacggtcgcctcgagacggcttcgcgccgaaagacataattatcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|9 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaGCTTCG-C-----GC-CG--A-AA--GACA-----T-A--------------A--T---T---ATCGC---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TAT-T-TA--ATAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--AC-TG---A-T-TATTTGA-AGA----TTTTA------TGTTCTATAATGTCA---AA-AG-T-A-atcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC
Unaligned ( gi|21 ): GGGACGTTTTCGCGTCCAAGTACGATTCGCCTGCCAAAGACTGTACGCCCGAGACGGTTGCGCGGCCAAAGGCGGTT
Alignments
lowQualScore : 11111 1111111111 111111111111 11111111 1111111 111 111111111111 2222222222222222222222222222222222222 2222222222222222 1111111 11 111111 111111 1111 2222222222222 1 333333333333333333 11111 1111111111111 111111111111111111111 111111111111111
lowQualScore : 0 8 55555 5 33 2 33 2 55 2 33 55 7777777777 5555 6666 2 8888888 2 2 4 2 4 2 2 2 777 2 555555555555 33 66 2 00000000 2 33 2 9999999 2 2 555 2 77 1 2 3333 66666 2 2 2 2222222 2 2 555 33 33 666 33 333 2 444444444444 2 0000000000000000000000000000000000000 3 3 5555555555555555 3 33 1111111 444 11 66 66 5 66 888 66 5 5 66 999999 0 777 55 5 5 222222 0 0 5 1111 77 1111111111111 0 666666666666666666 5 4 777 55 3 22 11111 1 3 4 1 2 1 1 2 2 33 9999999999999 1 44444 333333333333333333333 111111111111111 1 33 4 22 1 22 1 2 1 1 1 1
lowQualScore : . . ..... . .. . .. . .. . .. .. .......... .... .... . ....... . . . . . . . . ... . ............ .. .. . ........ . .. . ....... . . ... . .. . . .... ..... . . . ....... . . ... .. .. ... .. ... . ............ . ..................................... . . ................ . .. ....... ... .. .. .. . .. ... .. . . .. ...... . ... .. . . ...... . . . .... .. ............. . .................. . . ... .. . .. ..... . . . . . . . . . .. ............. . ..... ..................... ............... . .. . .. . .. . . . . . .
lowQualScore : 2 0 77777 3 44 5 44 5 99 5 44 66 9999999999 6666 8888 4 6666666 4 4 7 4 7 4 4 4 666 8 444444444444 44 99 7 44444444 9 99 9 9999999 9 9 444 9 88 0 9 1111 99999 9 9 9 1111111 9 9 000 99 99 444 99 666 6 333333333333 9 6666666666666666666666666666666666666 6 6 9999999999999999 6 99 8888888 666 00 99 99 0 99 888 99 0 0 99 444444 2 111 44 0 0 333333 7 7 7 6666 99 4444444444444 0 999999999999999999 0 4 888 55 1 11 00000 3 9 7 2 7 2 2 4 4 00 9999999999999 2 44444 333333333333333333333 333333333333333 3 11 1 00 4 00 4 9 5 5 8 8
consensus : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
Reference ( family-3333 ) : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
gi|1 : -----T-T-TTG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------CGAA-------------A-AC-T--A-TTT--T-GG--A-GC-G--A-A-C-GTCCCG
gi|1 : gtg--AAA-ATACA--T-----T-T-T-G-GTG-C-TAA-CCG-CC--TTTTTTTTTTCC--GTG-----AG---------------------CGAA-------------A-GG-T--C-TTT--T-GG--A-GC-G-AA-T-C-GTCgacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagttttcgctccaa--A-AA--GGCG-G--TT-AGCA--CC--AA---AA-T-G-TATTTTCGC---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TAT-T-----A-ATTAGCA--------T-TTGT--C--TTAT-AATA--------TTC-ATTAAC-CG---A-T-T-TTTAA-A-AT---TTTTAA-A--CGGAT-CACAAAACCA---AA-AA-TCA-------AT-G---GC----CAA--CC--AA--CGGTGA---TTGA---------------------------AGTT-----------AA----------G-A-TT-A--------------A-AG-AA-------AACTA-C-TGGCCTAT-GGTACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGATA--ATTCTT-TAA--TT------TA-AGACAGAAAT-GAGAAC-T-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--AATGT--AT-----T---GGGTA-TTGGGGAAAAAAAAAAAAAAAAA-AAAA-AAA---AAAAATGCC--ACA-TTAGG--T-----T---------G-C-GAA-TCGTTC--T----------T--G-G-----AG---------------------CCAA-------------A-CG-T--T-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|10 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa-----T-T-TCG-GAG-C-GAA-TCA-TC--T----------T--G-G-----AG---------------------CGAA-------------A-AG-T--C-TTT--C-GG--A-GC-G-AA-A-G-GTCCCG
gi|10 : g-----T-T-TTG-GCG-C-GAA-ACA-CC--TTT--------C--G-G-----AG---------------------CGAA-------------T-CA-T--C-TT-----GG--A-GC-G-AA-A-A-GTCggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaaACA--T-----T-T-T-G-GGG-C-TAA-CCG-CC--T----------TTTG-G-----CG---------------------CGAA-------------A-CA-C--C-TTT--C-GG--A-GC-G-AA-T-C-ATCggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaagacttttcgctccaaGTTTCG-C-----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-A-T-TCAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAG--TA--AA--CGG--A---TACA------CCATTTG-AAA---------CTATT-----------AA-C-G-G-T--G-A-TT-A--------------A-AG-TA-------AACTA-T-GGCCATA---GTACT--C--TTACTCAAAATCTGATAATttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|11 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtACG--TC----T-T-TCG-GAG-C-GAA-TGG-TC--TACCCC-----C--G-G-----CG---------------------CCGC-------------C-CG-T--C-TTT--CGGG--A-GCGG-AA-A-A-GTCCCG
gi|11 : gtgCG--TC----T-T-TCG-GCG-CCGAA-CCG-TC--C----------C--G-A-----AGGCGGACACCTGTCTAAGGCCGCGAA-------------AACG-T--C-TTT--C-GG--A-GC-G-AA-tttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|11 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccaACGGTTCGGC-----GC-CG--A-AA--GACGAG--AC-CGCC--CC--AACGAA--T---T---ATCGC---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TAT-TCTA--ATAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTTG---ATT-T-TTGAC-AGAT---TTATA------TG-T-TATAATGT-A---AACAG-T-A-------GT-GAGAACAGGTCAA---A--AA---GG--AT--TTCA------C-----A-agaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggCG--TC----T-T-TCG-GCG-C-GAA-CCG--C--T----------C--G-A-----GG---------------------CGAACCGGCTGGGCGCAA-CG-T--C-TTT--C-GG--A-GC-G-AA-catac
gi|12 : gtgggggacttttcgcaacgaagagtttcgcgctagcaCGGTTCG-C-----GC-CG--A-AA--GACG-G--TT-CGCC--CA--AG---A--T-A-T---ATCG----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TAT-T-TT--ATAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--AC-TG---A-TCT-TTTGA-AGAA---TTTTAA-A---TGTT-AATAATGT------A-AG-T-A-------GT-GA-A-CA---GGA--TA--AA---AG--A---TCCA------C-----A-gttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|13 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgag-GCT---TGGGA-GCG--AAA-CT-----C-----T-T-TCG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG----------------------GAA-------------A-CG-T--tacaagtca
gi|13 : GTTTCG-C-----TC-CC--A-AG--CCCC-G--TT-AGCC--CC--AA---AC-T-G-T---TTCCCAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAG-T-TT--ATATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A--CG---A-A-T-TTAAA---AT---TTT--A-A-ACTTTT-TATGATGT-AAACAA-AGTT-A-------ATAGA-AGCA---CAA--TA--AA--CGG--A---T---------C-----A-AAA-----------ACT-----------AA-CGG-G-T--GCA-TT-G--------------A-AG-TA-------AACTATC-TGCCATAcccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|14 : acgtttcctccaagacgattcgctccgaaagaCG--T-----C-TGTTG-GAG-C-GAA-TCA-TC--C----------T--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--T-GG--A-GC-G-AA-gt
gi|14 : ACA--T-----T-T-T-G-GGG-C-TAA-CCG-TC--TGT--------T--G-G-----AG---------------------CGAA-------------T-CA-T--C-CT-----GG--A-GC-G-AA-A-C-GTCgttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|14 : ttcgctccaaaaTTCG-C-----TC-CA--A-CA--GACG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-C-TA--ATTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAC---TTTTAA-A-ACTGCT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAATT-----------AA-ttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : ttcgctccaaaagacgtttcgctccaggatga--T-----T-T-TCG-GAG---GAA-TGGGTC--T----------CT-G-G-----CG---------------------CGCA---------------CG-TT-C-TTT--G-GG--A-GC-G-AA-T-A-GTCCCGtaaatgccaatcaacgg
gi|15 : agtgCG--T-----C-C-TCGAGGG-C-GAA-CCA-TC--T----------G--G-G-----GG---------------------CGAA-------------A-CG-T--CTTTT--C-GG--A-G--G-AA-gacgtttcgcccccagatggttcgccctcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|15 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaTTCG-C-----GGGCG--AGAA--GACG-GGTTT-AGCC--CC--AA---A--TAG-T---ATCGC---TA-GC-G---A-T--TGTGTC--GA-TA-----------TG--ATATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--AC-GGTATG-T-T-TTGAA-Aggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|16 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacgggG-AGG-C-GAA-CCG-TC--C----------T--G-G-----AGGGCT-----------------CGAA---------------CG-T--CTTTT--C-GGGAG-GC-G-AA-A-T-a
gi|16 : cgcgggacttacgctccaaaagagttttcgcgccaagacACGGTTCGAC-----GC-CGGTA-AA--GACG-G--TTTAGTCTCCC--AAG--A--CAG-T---ATCGC---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TAC-T-TGTAATAAAAC----------T-TTGT--C--TTTT-tgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|17 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctg--AA---A--T-G-T-----AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TAT-T-TA--TTAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--AC-CA---T-T-T-TCAAA-AGAT---TTTTAA-A-AAGGGC-TA----GT-A---AA-AG-T-AT------AT-----GCA---CAAGCTA--AA--GGG--AT--TTCAACAAATC-----A-AAATGGATATGCCAACC-----------AATC-G-GAA--G-A-TT-A--------------AGAG-AA-------AACTA-CGCGCCtaaaaatc
gi|18 : --C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGATT--ATT-TT-TAACTTT------CGGAGACATAA-T-GAGA-C-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCAT--AT-----TTGCGAGTA-TTG------------------AA-AAATAGCA----GGGATGTT--AAA-TTATG--TATAGGT-TGTCG-GGG-----A-TCG-T
gi|19 : ac-CATC--TGCT---GGGATT--ATT-TTCTAA--TAA-----TAGAGACATAA-TTGAGA-C-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--AATAT--AT-----TTG-GGGTAGTTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TC--T----------T--G-G-----A
gi|2 : tt-GAA-TCG-TC--T----------T--G-------AG---------------------CAAA----------------G-T--C-TTT--C-GG--A-GC-G-AAGA-C-GTCCCG
gi|2 : gGTTTCG-CCT---GCACG--A-AAAGGGCG-G--TT-AGCA--ACG-AA---A--T---T---TTCG----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TAC-T-TT--ACATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--AC-CGTG-A-TCT-TTAAATAGAT---TTTTAA-A--CGGAT-TA-------------------A-------AC-AA-ATCA---CAA--TGCCAA--C----------CA------A-----A-GGG---------TGATT-----------GA-T-A-G-TAAG-A-TT-A--------------A-AG-AA-------AGCTA----GCCATATTGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGATA--ATT-CT-TAA--TT------T-AAGACAGAA---GAGA-CTT-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--AATGT--AT-----TT---GGTA-TTG------------------GA-AAAT-GCACCTTAGG-TG-C--GAA-T--CG--------T-C-TAG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------CGAA-------------A-CG-T--T-TTTTCT-GG--A-GC-G-AA-A-CGGTCCCGTTActcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|20 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaCA--T-----T-T-TTG-GGG-C-TAA-CCG-CC--T----------TTTG-GC----GG---------------------CGAA-------------A-CGGT--C-TTT--C-GA--A-AC-
gi|20 : CGTTTCG-CC----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AAAT-GGT---TTCGC---TA-GC-A-----TG-TTTCTC-TGA-TA-A-T-TAT-T-TG--ATA--------------T-TTGT--C--TTTgtttcgctagcatgtttctctgataattatttgatatttgtctttacagtattaat
gi|22 : gtttcgaaagac-TTG------------------AA-AAAT-GCA---TGGGATTTT--AAA-TTACA--T-----T-G-TAG-GAG-C-GAA-TCG-TCTTT----------T--G-G-----AG---------------------TGAA-------------A-CG-T--C-acagtattaat
gi|23 : ACG--TC----T-T-TTG-GAG-C-GAA-TCG-TC--C----------T--A-G-----AG---------------------CGAA-------------A-CG-T--T-CTT--C-GG--A-GC-G-AA-A-C-GTCCCGc
gi|24 : gA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TT--T----------C--G-G-----TG---------------------TGAA-------------C-CG-T--C-TTT--C-GG--A-GT-G-AA-A-C-GTCCCGttcgcg
gi|25 : ---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GCAA-AA-A-C-GTTCCG
gi|3 : agtgACG--TC----T-T-TCG-GAG-A-GAAATCG-TCC-T----------T--G-G-----CG---------------------AGAA-------------A-CG-T--C-TTT--C-GG--ATGC-GAAA-A-C-GTCCCG
gi|3 : gtgTACGAAC-----T-T-TCG-G---C-TAA-CCG-CC--TTT--------C--G-GCCCCGGG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GA-G-AA-ATC-GTCCttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|3 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaACGTTTCG-CCCGGGGC-CG--A-AA--GGCG-G--TT-AGCC------GA---A--A-G-T---T-CG----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TAT-T-TG--ATATT---------------TGT--C--TTTT-AAT-----------T-AT--AT-CG---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGAAGC-A---AA-GC-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--AT--TTCA------C-----A-AAA---------CAATT-----------AA-A-G-GTT--G-A-TTGG--------------A-AG-TA-------AACTA-C-CGCCATGT-AGTACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGATT--ATT-TT-C-A--TT------TGGAGGAATAA-T-GAGA-C-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--AATAT--ACATGTATTG-GGGTA-TTG------------------AATAAAT-GTA---TGGGATGTTAAAAA-TCACA--T-----TGTATAG-GTG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------Cgcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGGC-----GC-CG--A-AA--GTCG-GC-TT-AGCC--TCAGAA---A--T-GAG---TTAGCA--TG-TC-A---A-TG-TTC-TC-TGA-TA-A-T-TATAT-TGA-ATATTAT----------T-TTG
gi|4 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagTTGA-ATATTATT-T-TG--GT-A---AA-A--T-A-------AT-GA-AGCA---CAA--TA--AATACGG--A---TTCA------C-----ACAAA---------TTATT-----------A--C-GAG-T--G-AGTT-GC-------------A-AG-AATAATATAAATTA-C-CGCC-CAT-AGTACT--C--TTACTCAAAATCTGATAAT-A-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C-T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--AATATGAAT-----T----GGTACTTG------------------AA-AAAT-GCA---TGGGATGTG--AAATTTACA--T-----T-A-TAG-AGT-C-GAA-TTG-TT--C----------T--G-G-----AG---------------------CGAA-------------A-CG-T--gtaaaataatgaagcacaataaatacggattcacacaaattattacgagtgagttgcaagaataatataaattaccgcccatagtactcttactcaaaatctgataatacatctgctgggactgtatttttaatttggagacataatgagctctttaattgcgagatgccaggccgttatataatatgaattggtacttgaaaaatgcatgggatgtgaaatttacattatagagtcgaattgttctggagcgaaacgt
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagacgtttcggcgccgaaagtcggcttagcctcagaaatgagttagcatgtcaatgttctctgataattata-TCACA--C-----C-T-TAG-GCGGC-GAA-CCG-TC--T----------C--A-A-----GG---------------------CGAA---------------CG-T--CGTTT--G-GG--A-GC-G-AA-
gi|5 : aACGGTTCG-CC----GC-CT--A-A---GGTG----TG-AGCC--CC--AA------T-G-T---TCC-----TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TAT-T-TC--ATATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--AC-TG---A-T-T-ATAAA-AAAAAAATTTTAATA-ACTGTT-TATGATGT-A---AA-AG-T-A-------AA-GG-GATT---TAC--TA--AA--CAA--A---T---------C-----A-ATG---------CTACC-----------TA-C-G-G-T--G-A-TC-GAGTAAGATGCAAGAA-AG-AA-------AACTA-C-CGCCATAgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|7 : attcgctcccaaacgacgttcgccttgagACGTTTCG-T-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCAC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CA---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATAATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CAG--A---TTCA------C-----A-AAA---------CTATT-----------AA-T-G-G-T--G-A-TT-G--------------A-AGTCA-------AATTA-C-CGCCATAT---TACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGT-A-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT---C-----TTG-GGGTA-CTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------C-TG-T--C-TTT--C-GG--A-GC-G-AA-A-T-GTCCCGTTACatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|8 : -----T-C-TCG-AGG-T-GAA-ATG-TC--TTT--------C--G-G-----AG---------------------CGAA-------------T-CG-T--C-TT-----GG--A-GC-G-AA-A-C-GTCCCG
gi|8 : tg-----T-T-TCG-GCG-C-GAA-CCA-TC--T----------C--G-A-----GG---------------------TGAA-------------A-TG-T--C-TTT--C-GG--A-GC-G-AA-T-C-GTCtggttcgcgccgaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|8 : tgcgggacgtttcgctccaaTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TA--ATATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--AC-CC---A-T-T-TTAAA-AGAT---ATTTAA-A-ACTGT-----------A---AA-AG-T-A-------AT-AT-AGCA---CAG--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAAATCACTGCCAACCAA-C-G-G-TAAG-A-TT-A--------------A-AG-AA-------AACTA-C-CGCCATGT-GATACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGATT--ATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAGA-C-T-CTTTAATTATGggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|9 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggACG--T-----T-T-TCG--AG-C-GA--TGG-CT--T----------T--G-G------G---------------------CGAA-------------A-CG-TTGC-TTT--T-GG--G-GC-G-AA-A-A-GTCCCG
gi|9 : cgtgAA-TTATG--TC----T-T-TCG-GCG-C-GAAGCCG-TC--T----------C--G-A-----GG---------------------CG-A-------------C-CG-T--C-T------GG--G-GC-G--A-A-C-GTtcgccccagacggtcgcctcgagacggcttcgcgccgaaagacataattatcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|9 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaGCTTCG-C-----GC-CG--A-AA--GACA-----T-A--------------A--T---T---ATCGC---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TAT-T-TA--ATAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--AC-TG---A-T-TATTTGA-AGA----TTTTA------TGTTCTATAATGTCA---AA-AG-T-AGGCTACTAT-TA---CA---TTA--TA--AA--CAT--AAACTTCA------------A-AAA---------AAATC-----------AC-C-T-A-T----A-GT-G--------------A-AG-AA-------atcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC
Unaligned ( gi|21 ): GGGACGTTTTCGCGTCCAAGTACGATTCGCCTGCCAAAGACTGTACGCCCGAGACGGTTGCGCGGCCAAAGGCGGTT
Alignments
lowQualScore : 11111 1111111111 111111111111 11111111 1111111 111 111111111111 2222222222222222222222222222222222222 2222222222222222 1111111 11 111111 111111 1111 2222222222222 1 333333333333333333 11111 1111111111111 111111111111111111111 111111111111111
lowQualScore : 0 8 55555 5 33 2 33 2 55 2 33 55 7777777777 5555 6666 2 8888888 2 2 4 2 4 2 2 2 777 2 555555555555 33 66 2 00000000 2 33 2 9999999 2 2 555 2 77 1 2 3333 66666 2 2 2 2222222 2 2 555 33 33 666 33 333 2 444444444444 2 0000000000000000000000000000000000000 3 3 5555555555555555 3 33 1111111 444 11 66 66 5 66 888 66 5 5 66 999999 0 777 55 5 5 222222 0 0 5 1111 77 1111111111111 0 666666666666666666 5 4 777 55 3 22 11111 1 3 4 1 2 1 1 2 2 33 9999999999999 1 44444 333333333333333333333 111111111111111 1 33 4 22 1 22 1 2 1 1 1 1
lowQualScore : . . ..... . .. . .. . .. . .. .. .......... .... .... . ....... . . . . . . . . ... . ............ .. .. . ........ . .. . ....... . . ... . .. . . .... ..... . . . ....... . . ... .. .. ... .. ... . ............ . ..................................... . . ................ . .. ....... ... .. .. .. . .. ... .. . . .. ...... . ... .. . . ...... . . . .... .. ............. . .................. . . ... .. . .. ..... . . . . . . . . . .. ............. . ..... ..................... ............... . .. . .. . .. . . . . . .
lowQualScore : 2 0 77777 3 44 5 44 5 99 5 44 66 9999999999 6666 8888 4 6666666 4 4 7 4 7 4 4 4 666 8 444444444444 44 99 7 44444444 9 99 9 9999999 9 9 444 9 88 0 9 1111 99999 9 9 9 1111111 9 9 000 99 99 444 99 666 6 333333333333 9 6666666666666666666666666666666666666 6 6 9999999999999999 6 99 8888888 666 00 99 99 0 99 888 99 0 0 99 444444 2 111 44 0 0 333333 7 7 7 6666 99 4444444444444 0 999999999999999999 0 4 888 55 1 11 00000 3 9 7 2 7 2 2 4 4 00 9999999999999 2 44444 333333333333333333333 333333333333333 3 11 1 00 4 00 4 9 5 5 8 8
consensus : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
Reference ( family-3333 ) : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
gi|1 : -----T-T-TTG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------CGAA-------------A-AC-T--A-TTT--T-GG--A-GC-G--A-A-C-GTCCCG
gi|1 : gtg--AAA-ATACA--T-----T-T-T-G-GTG-C-TAA-CCG-CC--TTTTTTTTTTCC--GTG-----AG---------------------CGAA-------------A-GG-T--C-TTT--T-GG--A-GC-G-AA-T-C-GTCgacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagttttcgctccaa--A-AA--GGCG-G--TT-AGCA--CC--AA---AA-T-G-TATTTTCGC---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TAT-T-----A-ATTAGCA--------T-TTGT--C--TTAT-AATA--------TTC-ATTAAC-CG---A-T-T-TTTAA-A-AT---TTTTAA-A--CGGAT-CACAAAACCA---AA-AA-TCA-------AT-G---GC----CAA--CC--AA--CGGTGA---TTGA---------------------------AGTT-----------AA----------G-A-TT-A--------------A-AG-AA-------AACTA-C-TGGCCTAT-GGTACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGATA--ATTCTT-TAA--TT------TA-AGACAGAAAT-GAGAAC-T-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--AATGT--AT-----T---GGGTA-TTGGGGAAAAAAAAAAAAAAAAA-AAAA-AAA---AAAAATGCC--ACA-TTAGG--T-----T---------G-C-GAA-TCGTTC--T----------T--G-G-----AG---------------------CCAA-------------A-CG-T--T-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|10 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa-----T-T-TCG-GAG-C-GAA-TCA-TC--T----------T--G-G-----AG---------------------CGAA-------------A-AG-T--C-TTT--C-GG--A-GC-G-AA-A-G-GTCCCG
gi|10 : g-----T-T-TTG-GCG-C-GAA-ACA-CC--TTT--------C--G-G-----AG---------------------CGAA-------------T-CA-T--C-TT-----GG--A-GC-G-AA-A-A-GTCggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaaACA--T-----T-T-T-G-GGG-C-TAA-CCG-CC--T----------TTTG-G-----CG---------------------CGAA-------------A-CA-C--C-TTT--C-GG--A-GC-G-AA-T-C-ATCggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaagacttttcgctccaaGTTTCG-C-----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-A-T-TCAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAG--TA--AA--CGG--A---TACA------CCATTTG-AAA---------CTATT-----------AA-C-G-G-T--G-A-TT-A--------------A-AG-TA-------AACTA-T-GGCCATA---GTACT--C--TTACTCAAAATCTGATAATttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|11 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtACG--TC----T-T-TCG-GAG-C-GAA-TGG-TC--TACCCC-----C--G-G-----CG---------------------CCGC-------------C-CG-T--C-TTT--CGGG--A-GCGG-AA-A-A-GTCCCG
gi|11 : gtgCG--TC----T-T-TCG-GCG-CCGAA-CCG-TC--C----------C--G-A-----AGGCGGACACCTGTCTAAGGCCGCGAA-------------AACG-T--C-TTT--C-GG--A-GC-G-AA-tttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|11 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccaACGGTTCGGC-----GC-CG--A-AA--GACGAG--AC-CGCC--CC--AACGAA--T---T---ATCGC---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TAT-TCTA--ATAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTTG---ATT-T-TTGAC-AGAT---TTATA------TG-T-TATAATGT-A---AACAG-T-A-------GT-GAGAACAGGTCAA---A--AA---GG--AT--TTCA------C-----A-agaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggCG--TC----T-T-TCG-GCG-C-GAA-CCG--C--T----------C--G-A-----GG---------------------CGAACCGGCTGGGCGCAA-CG-T--C-TTT--C-GG--A-GC-G-AA-catac
gi|12 : gtgggggacttttcgcaacgaagagtttcgcgctagcaCGGTTCG-C-----GC-CG--A-AA--GACG-G--TT-CGCC--CA--AG---A--T-A-T---ATCG----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TAT-T-TT--ATAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--AC-TG---A-TCT-TTTGA-AGAA---TTTTAA-A---TGTT-AATAATGT------A-AG-T-A-------GT-GA-A-CA---GGA--TA--AA---AG--A---TCCA------C-----A-gttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|13 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgag-GCT---TGGGA-GCG--AAA-CT-----C-----T-T-TCG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG----------------------GAA-------------A-CG-T--tacaagtca
gi|13 : GTTTCG-C-----TC-CC--A-AG--CCCC-G--TT-AGCC--CC--AA---AC-T-G-T---TTCCCAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAG-T-TT--ATATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A--CG---A-A-T-TTAAA---AT---TTT--A-A-ACTTTT-TATGATGT-AAACAA-AGTT-A-------ATAGA-AGCA---CAA--TA--AA--CGG--A---T---------C-----A-AAA-----------ACT-----------AA-CGG-G-T--GCA-TT-G--------------A-AG-TA-------AACTATC-TGCCATAcccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|14 : acgtttcctccaagacgattcgctccgaaagaCG--T-----C-TGTTG-GAG-C-GAA-TCA-TC--C----------T--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--T-GG--A-GC-G-AA-gt
gi|14 : ACA--T-----T-T-T-G-GGG-C-TAA-CCG-TC--TGT--------T--G-G-----AG---------------------CGAA-------------T-CA-T--C-CT-----GG--A-GC-G-AA-A-C-GTCgttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|14 : ttcgctccaaaaTTCG-C-----TC-CA--A-CA--GACG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-C-TA--ATTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAC---TTTTAA-A-ACTGCT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAATT-----------AA-ttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : ttcgctccaaaagacgtttcgctccaggatga--T-----T-T-TCG-GAG---GAA-TGGGTC--T----------CT-G-G-----CG---------------------CGCA---------------CG-TT-C-TTT--G-GG--A-GC-G-AA-T-A-GTCCCGtaaatgccaatcaacgg
gi|15 : agtgCG--T-----C-C-TCGAGGG-C-GAA-CCA-TC--T----------G--G-G-----GG---------------------CGAA-------------A-CG-T--CTTTT--C-GG--A-G--G-AA-gacgtttcgcccccagatggttcgccctcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|15 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaTTCG-C-----GGGCG--AGAA--GACG-GGTTT-AGCC--CC--AA---A--TAG-T---ATCGC---TA-GC-G---A-T--TGTGTC--GA-TA-----------TG--ATATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--AC-GGTATG-T-T-TTGAA-Aggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|16 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacgggG-AGG-C-GAA-CCG-TC--C----------T--G-G-----AGGGCT-----------------CGAA---------------CG-T--CTTTT--C-GGGAG-GC-G-AA-A-T-a
gi|16 : cgcgggacttacgctccaaaagagttttcgcgccaagacACGGTTCGAC-----GC-CGGTA-AA--GACG-G--TTTAGTCTCCC--AAG--A--CAG-T---ATCGC---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TAC-T-TGTAATAAAAC----------T-TTGT--C--TTTT-tgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|17 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctg--AA---A--T-G-T-----AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TAT-T-TA--TTAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--AC-CA---T-T-T-TCAAA-AGAT---TTTTAA-A-AAGGGC-TA----GT-A---AA-AG-T-AT------AT-----GCA---CAAGCTA--AA--GGG--AT--TTCAACAAATC-----A-AAATGGATATGCCAACC-----------AATC-G-GAA--G-A-TT-A--------------AGAG-AA-------AACTA-CGCGCCtaaaaatc
gi|18 : --C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGATT--ATT-TT-TAACTTT------CGGAGACATAA-T-GAGA-C-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCAT--AT-----TTGCGAGTA-TTG------------------AA-AAATAGCA----GGGATGTT--AAA-TTATG--TATAGGT-TGTCG-GGG-----A-TCG-T
gi|19 : ac-CATC--TGCT---GGGATT--ATT-TTCTAA--TAA-----TAGAGACATAA-TTGAGA-C-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--AATAT--AT-----TTG-GGGTAGTTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TC--T----------T--G-G-----A
gi|2 : tt-GAA-TCG-TC--T----------T--G-------AG---------------------CAAA----------------G-T--C-TTT--C-GG--A-GC-G-AAGA-C-GTCCCG
gi|2 : gGTTTCG-CCT---GCACG--A-AAAGGGCG-G--TT-AGCA--ACG-AA---A--T---T---TTCG----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TAC-T-TT--ACATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--AC-CGTG-A-TCT-TTAAATAGAT---TTTTAA-A--CGGAT-TA-------------------A-------AC-AA-ATCA---CAA--TGCCAA--C----------CA------A-----A-GGG---------TGATT-----------GA-T-A-G-TAAG-A-TT-A--------------A-AG-AA-------AGCTA----GCCATATTGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGATA--ATT-CT-TAA--TT------T-AAGACAGAA---GAGA-CTT-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--AATGT--AT-----TT---GGTA-TTG------------------GA-AAAT-GCACCTTAGG-TG-C--GAA-T--CG--------T-C-TAG-GAG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------CGAA-------------A-CG-T--T-TTTTCT-GG--A-GC-G-AA-A-CGGTCCCGTTActcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|20 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaCA--T-----T-T-TTG-GGG-C-TAA-CCG-CC--T----------TTTG-GC----GG---------------------CGAA-------------A-CGGT--C-TTT--C-GA--A-AC-
gi|20 : CGTTTCG-CC----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AAAT-GGT---TTCGC---TA-GC-A-----TG-TTTCTC-TGA-TA-A-T-TAT-T-TG--ATA--------------T-TTGT--C--TTTgtttcgctagcatgtttctctgataattatttgatatttgtctttacagtattaat
gi|22 : gtttcgaaagac-TTG------------------AA-AAAT-GCA---TGGGATTTT--AAA-TTACA--T-----T-G-TAG-GAG-C-GAA-TCG-TCTTT----------T--G-G-----AG---------------------TGAA-------------A-CG-T--C-acagtattaat
gi|23 : ACG--TC----T-T-TTG-GAG-C-GAA-TCG-TC--C----------T--A-G-----AG---------------------CGAA-------------A-CG-T--T-CTT--C-GG--A-GC-G-AA-A-C-GTCCCGc
gi|24 : gA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TT--T----------C--G-G-----TG---------------------TGAA-------------C-CG-T--C-TTT--C-GG--A-GT-G-AA-A-C-GTCCCGttcgcg
gi|25 : ---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GCAA-AA-A-C-GTTCCG
gi|3 : agtgACG--TC----T-T-TCG-GAG-A-GAAATCG-TCC-T----------T--G-G-----CG---------------------AGAA-------------A-CG-T--C-TTT--C-GG--ATGC-GAAA-A-C-GTCCCG
gi|3 : gtgTACGAAC-----T-T-TCG-G---C-TAA-CCG-CC--TTT--------C--G-GCCCCGGG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GA-G-AA-ATC-GTCCttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|3 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaACGTTTCG-CCCGGGGC-CG--A-AA--GGCG-G--TT-AGCC------GA---A--A-G-T---T-CG----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TAT-T-TG--ATATT---------------TGT--C--TTTT-AAT-----------T-AT--AT-CG---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGAAGC-A---AA-GC-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--AT--TTCA------C-----A-AAA---------CAATT-----------AA-A-G-GTT--G-A-TTGG--------------A-AG-TA-------AACTA-C-CGCCATGT-AGTACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGATT--ATT-TT-C-A--TT------TGGAGGAATAA-T-GAGA-C-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--AATAT--ACATGTATTG-GGGTA-TTG------------------AATAAAT-GTA---TGGGATGTTAAAAA-TCACA--T-----TGTATAG-GTG-C-GAA-TCG-TC--T----------T--G-G-----AG---------------------Cgcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGGC-----GC-CG--A-AA--GTCG-GC-TT-AGCC--TCAGAA---A--T-GAG---TTAGCA--TG-TC-A---A-TG-TTC-TC-TGA-TA-A-T-TATAT-TGA-ATATTAT----------T-TTG
gi|4 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagTTGA-ATATTATT-T-TG--GT-A---AA-A--T-A-------AT-GA-AGCA---CAA--TA--AATACGG--A---TTCA------C-----ACAAA---------TTATT-----------A--C-GAG-T--G-AGTT-GC-------------A-AG-AATAATATAAATTA-C-CGCC-CAT-AGTACT--C--TTACTCAAAATCTGATAAT-A-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C-T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--AATATGAAT-----T----GGTACTTG------------------AA-AAAT-GCA---TGGGATGTG--AAATTTACA--T-----T-A-TAG-AGT-C-GAA-TTG-TT--C----------T--G-G-----AG---------------------CGAA-------------A-CG-T--gtaaaataatgaagcacaataaatacggattcacacaaattattacgagtgagttgcaagaataatataaattaccgcccatagtactcttactcaaaatctgataatacatctgctgggactgtatttttaatttggagacataatgagctctttaattgcgagatgccaggccgttatataatatgaattggtacttgaaaaatgcatgggatgtgaaatttacattatagagtcgaattgttctggagcgaaacgt
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagacgtttcggcgccgaaagtcggcttagcctcagaaatgagttagcatgtcaatgttctctgataattata-TCACA--C-----C-T-TAG-GCGGC-GAA-CCG-TC--T----------C--A-A-----GG---------------------CGAA---------------CG-T--CGTTT--G-GG--A-GC-G-AA-
gi|5 : aACGGTTCG-CC----GC-CT--A-A---GGTG----TG-AGCC--CC--AA------T-G-T---TCC-----TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TAT-T-TC--ATATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--AC-TG---A-T-T-ATAAA-AAAAAAATTTTAATA-ACTGTT-TATGATGT-A---AA-AG-T-A-------AA-GG-GATT---TAC--TA--AA--CAA--A---T---------C-----A-ATG---------CTACC-----------TA-C-G-G-T--G-A-TC-GAGTAAGATGCAAGAA-AG-AA-------AACTA-C-CGCCATAgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|7 : attcgctcccaaacgacgttcgccttgagACGTTTCG-T-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCAC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CA---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATAATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CAG--A---TTCA------C-----A-AAA---------CTATT-----------AA-T-G-G-T--G-A-TT-G--------------A-AGTCA-------AATTA-C-CGCCATAT---TACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGT-A-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT---C-----TTG-GGGTA-CTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACA--T-----T-A-TAG-GTG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------C-TG-T--C-TTT--C-GG--A-GC-G-AA-A-T-GTCCCGTTACatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|8 : -----T-C-TCG-AGG-T-GAA-ATG-TC--TTT--------C--G-G-----AG---------------------CGAA-------------T-CG-T--C-TT-----GG--A-GC-G-AA-A-C-GTCCCG
gi|8 : tg-----T-T-TCG-GCG-C-GAA-CCA-TC--T----------C--G-A-----GG---------------------TGAA-------------A-TG-T--C-TTT--C-GG--A-GC-G-AA-T-C-GTCtggttcgcgccgaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|8 : tgcgggacgtttcgctccaaTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---AA-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TA--ATATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--AC-CC---A-T-T-TTAAA-AGAT---ATTTAA-A-ACTGT-----------A---AA-AG-T-A-------AT-AT-AGCA---CAG--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAAATCACTGCCAACCAA-C-G-G-TAAG-A-TT-A--------------A-AG-AA-------AACTA-C-CGCCATGT-GATACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGATT--ATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAGA-C-T-CTTTAATTATGggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|9 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggACG--T-----T-T-TCG--AG-C-GA--TGG-CT--T----------T--G-G------G---------------------CGAA-------------A-CG-TTGC-TTT--T-GG--G-GC-G-AA-A-A-GTCCCG
gi|9 : cgtgAA-TTATG--TC----T-T-TCG-GCG-C-GAAGCCG-TC--T----------C--G-A-----GG---------------------CG-A-------------C-CG-T--C-T------GG--G-GC-G--A-A-C-GTtcgccccagacggtcgcctcgagacggcttcgcgccgaaagacataattatcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|9 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaGCTTCG-C-----GC-CG--A-AA--GACA-----T-A--------------A--T---T---ATCGC---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TAT-T-TA--ATAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--AC-TG---A-T-TATTTGA-AGA----TTTTA------TGTTCTATAATGTCA---AA-AG-T-AGGCTACTAT-TA---CA---TTA--TA--AA--CAT--AAACTTCA------------A-AAA---------AAATC-----------AC-C-T-A-T----A-GT-G--------------A-AG-AA-------atcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
blockSeqs : G CCGGG G GT G AG A GT T TC AG AAATGG T CAAG C ATTAA G T T T G C A C GTA T AAGTTAAAAAC TC TT T ATCAGATA A . T TATGT A T AAA T TA T C TGAT AAAC C T . GGCTACT A G GGT GC CC TAC . AAC A ACAAATC C CAAATCACTGCCAACCAACGGTAA C G GAGTAAGATGCAAGA G TC TAATATA TC TG . AT . . . GT . C CT TGCCAA TT A T G TCGTA . TCT TC ACATGTATTG G . T A CCT AA T AA ATAGG G G C A T G C A T TT TTTTTTTTTCC T CCCCG GCGGACACCTGTCTAAGGCCG CCGGCTGGGCGCAA G TG T TC G GA T G A G T G
blockSeqs : A CT A . . . . C . . G CGAAT A CA . CAG . . G . A . . . GA A TC . AT . . . . . TGATC . . . . A T . TAAT CA . . . T . . . . . C . T T CCATTT . TGGATATGCCAACCAATCGGAA . . GG . T . CG A . . . . . . . . . A T A . . AT . AT . ATTTGC C . . . . . . . C . G T . A . . G G C ACCCCC . C GGCT AA . T T . . . . A . . . .
blockSeqs : G C . . . . . . . . . GACAG A C . CGA . . . . . . . . G A TA . . . . . . . ATT . . . . A T . TAAT A . . . . . . . . . C . T C C . TGATTGATAGTAA . . GC . T . T A . . . . . . . . . . T A . . A . T . ATTTG . . . . . . . . C . A C . C . . . . . TTC . . . A . . G . . . . . . . . .
blockSeqs : . C . . . . . . . . . AATG T C . TAA . . . . . . . . A T TA . . . . . . . ATC . . . . A C . TGAT A . . . . . . . . . G . T T C . CAATTAAAGGTT . . A . A . C G . . . . . . . . . . T A . . A . T . GAATT . . . . . . . . C . . C . G . . . . . TTT . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ACTG T C . GAG . . . . . . . . T T T . . . . . . . AA . . . . A G . TGAT A . . . . . . . . . G . . T C . CTATTAACGGT . . G . A . C . . . . . . . . . . . T T . . A . T . ATTT . . . . . . . . C . . C . A . . . . . GTT . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . AATG A C . GT . . . . . . . . T T T . . . . . . . AA . . . . A A . TGAA A . . . . . . . . . C . . T C . TTATTACGAGT . . A . T . C . . . . . . . . . . . T A . . . . T . CTTG . . . . . . . . C . . C . C . . . . . TTT . . . T . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ATAG A C . AA . . . . . . . . A A T . . . . . . . AT . . . . A T . TGAT A . . . . . . . . . C . . T A . CTACCTACGGT . . A . A . C . . . . . . . . . . . . . . . . . . . . . . C . . T . C . . . . . TTC . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ATGA T C . GA . . . . . . . . G G T . . . . . . . TT . . . . A T . TAAT A . . . . . . . . . C . . T C . CTATTAATGGT . . G . A . C . . . . . . . . C . A . . . . . TTC . . . C . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . AATG T C . CA . . . . . . . . A T T . . . . . . . AA . . . . A T . TAAT A . . . . . . . . . C . . T C . AAATCACCTAT . . A . A . . . . . . . . C . A . . . . . CT . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ATA T C . AA . . . . . . . . T T T . . . . . . . AT . . . . . T . TG A . . . . . . . . . G . . T C . ACTAACGGGT . . G . A . . . . . . C . G . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ATG T C . AA . . . . . . . . G T A . . . . . . . AA . . . . . T . . A . . . . . . . . . C . . . C . . . . . . A . A . . . . . T . . . T . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . AAG T C . AA . . . . . . . . G T T . . . . . . . AT . . . . . T . . . . . . . . . . . . . . . . C . . . . . . A . G . . . . . C . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . ATG T . . AA . . . . . . . . C T T . . . . . . . AT . . . . . . . . . . . . . . . . . . . . . . . . . . . T . G . . . . . C . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . AT T . . AA . . . . . . . . G A T . . . . . . . A . G . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . TG A . . A . . . . . . . . A . T . . . . . . T . T . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . AT . . . A . . . . . . . . A . . . . . . A . A . . . . . G . . . A . . . . . . . . . . . .
blockSeqs : . . . . C . G . . . . . T . . . C . . . . . . . . . . . .
blockSeqs : . . . . C . A . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . A . A . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . A . T . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . A . A . . . . . T . . . A . . . . . . . . . . . .
blockSeqs : . . . . A . T . . . . . T . . . C . . . . . . . . . .
blockSeqs : . . . . C . G . . . . . C . . . T . . . . . . . . . .
blockSeqs : . . . . C . C . . . . . T . . . A . . . . . . . . . .
blockSeqs : . . . . C . T . . . . . T . . . A . . . . . . . . . .
blockSeqs : . . . C . G . . . . . T . . . C . . . . . . . . . .
blockSeqs : . . . . . C . . . . . C . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . C . . . . . . .
blockSeqs : . . . . . C . . . . . C . . . . . .
blockSeqs : . . . . . . . . . . . T . . . . . .
blockSeqs : . . . . . . . C . . .
blockSeqs : . . .
blockSeqCons : T*** N** T*********** ** A* A**** ** C*********** CNATTAACGGT************************** ** ** *** T** A* T*** ATTTG******** ******************
originalCons : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TG--ATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
finalCons : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A--T-G-TT---TCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T-TN--ATATTATT-----------TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-AA-CTGTT-TATGATGTA----AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCAC-----------A-AAACNATTAACGGT--------------------------G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAAT--GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTTT---AT--AATATATTTG--------GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTACG--T-----T-T-TCG-GNG-C-GAA-TCG-TC--T----------C--G-G-----AG---------------------CGAA-------------A-CG-T--C-TTT--C-GG--A-GC-G-AA-A-C-GTCCCGTTAC
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC
Unaligned ( gi|21 ): GGGACGTTTTCGCGTCCAAGTACGATTCGCCTGCCAAAGACTGTACGCCCGAGACGGTTGCGCGGCCAAAGGCGGTT
Alignments
lowQualScore : 11111 111111111 11111 1111111111111111 11111111 1111111 111 111111111111 2222222222222222222222222222222222222 2222222222222222 1111111 11 111111 111111 1111 2222222222222 1 333333333333333333 11111 1111111111111 111111111111111111111 111111111111111
lowQualScore : 0 8 55555 5 33 2 33 2 55 2 33 88 444444444 5555 6666 2 00000 2 2 2 4 2 4 2 2 55 33 2222222222222222 33 66 2 00000000 2 33 2 9999999 2 2 555 2 77 1 2 3333 66666 2 2 2 2222222 2 2 555 33 33 666 33 333 2 444444444444 2 0000000000000000000000000000000000000 3 3 5555555555555555 3 33 1111111 444 11 66 66 5 66 888 66 5 5 66 999999 0 777 55 5 5 222222 0 0 5 1111 77 1111111111111 0 666666666666666666 5 4 777 55 3 1 22 00000 1 3 3 1 55555 1 1 1 2 1 2 1 22 8888888888888 1 5555555 222222222222222222222 1 000000000000000 1 22 3 11 2 1 11 1 2 1 1 222 1
lowQualScore : . . ..... . .. . .. . .. . .. .. ......... .... .... . ..... . . . . . . . . .. .. ................ .. .. . ........ . .. . ....... . . ... . .. . . .... ..... . . . ....... . . ... .. .. ... .. ... . ............ . ..................................... . . ................ . .. ....... ... .. .. .. . .. ... .. . . .. ...... . ... .. . . ...... . . . .... .. ............. . .................. . . ... .. . . .. ..... . . . . ..... . . . . . . . .. ............. . ....... ..................... . ............... . .. . .. . . .. . . . . ... .
lowQualScore : 2 0 77777 3 44 5 44 5 99 5 44 88 777777777 6666 8888 4 00000 4 4 4 7 4 7 4 4 66 44 6666666666666666 44 99 7 44444444 9 99 9 9999999 9 9 444 9 88 0 9 1111 99999 9 9 9 1111111 9 9 000 99 99 444 99 666 6 333333333333 9 6666666666666666666666666666666666666 6 6 9999999999999999 6 99 8888888 666 00 99 99 0 99 888 99 0 0 99 444444 2 111 44 0 0 333333 7 7 7 6666 99 4444444444444 0 999999999999999999 0 4 888 55 1 5 00 33333 2 6 8 2 88888 2 1 1 3 1 3 1 88 0000000000000 2 1111111 555555555555555555555 2 888888888888888 2 99 9 99 8 4 99 4 8 4 4 555 7
consensus : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T--T-NATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTAC-G--T-----T-T-TCG-G--N--G-C-G-AA-TC-G-T-C--T----------C--G-G-----A-G---------------------CG-AA-------------A-CG-T--C-TTT--C-G-G--A-GC-G-AA-A-C-G-TCCCGTTAC
Reference ( family-3333 ) : ACGTTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A-T-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T--T-NATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--A---TTCA------C-----A-AAA---------CNATT-----------AA-C-G-G-T--G-A-TT-G--------------A-AG-AA-------AACTA-C-CGCCATAT-GGTACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGA-C-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT--AT-----TTG-GGGTA-TTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTAC-G--T-----T-T-TCG-G--N--G-C-G-AA-TC-G-T-C--T----------C--G-G-----A-G---------------------CG-AA-------------A-CG-T--C-TTT--C-G-G--A-GC-G-AA-A-C-G-TCCCGTTAC
gi|1 : -----T-T-TTG-G--A--G-C-G-AA-TC-G-T-C--T----------T--G-G-----A-G---------------------CG-AA-------------A-AC-T--A-TTT--T-G-G--A-GC-G--A-A-C-G-TCCCG
gi|1 : gtg--AAA-ATAC-A--T-----T-T-T-G-G--T--G-C-T-AA-CC-G-C-C--TTTTTTTTTTCC--GTG-----A-G---------------------CG-AA-------------A-GG-T--C-TTT--T-G-G--A-GC-G-AA-T-C-G-TCgacctttcgctcacggaaaaaaaaaaggcggttagcaccaaaatgtattttcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|1 : gtgcgggacgttcgctccaaaatagttttcgctccaa--A-AA--GGCG-G--TT-AGCA--CC--AA---AAT-G-TATTTTCGC---TA-GC-A---A-TG-TT-ATC-TGA-TA-A-T-TAT-T--A-ATTAGCAT----------T-T-GT--C--TTAT-AATA--------TTC-ATTAAC-CG---A-T-T-TTTAA-A-AT---TTTTAA-A--CGGAT-CACAAAACCA---AA-AA-TCA-------AT-G---GC----CAA--CC--AA--CGGTGA---TTGA---------------------------AGTT-----------AA----------G-A-TT-A--------------A-AG-AA-------AACTA-C-TGGCCTAT-GGTACTTCC--TTACTCAAA-TCTGATAATTAACATTCATGCTTTTGGGATA--ATTCTT-TAA--TT------TA-AGACAGAAAT-GAGAAC-T-CTTTAATTATGAG----A-TGCAAGGCCTGTT-----T--AATGT--AT-----T---GGGTA-TTGGGGAAAAAAAAAAAAAAAAA-AAAA-AAA---AAAAATGCC--ACA-TTAG-G--T-----T-------------G-C-G-AA-TC-GTT-C--T----------T--G-G-----A-G---------------------CC-AA-------------A-CG-T--T-TTT--C-G-G--A-GC-G-AA-A-C-G-TCCCGTTcgctagcaatgttatctgataattattaattagcatttgtcttataatattcattaaccgatttttaaaatttttaaacggatcacaaaaccaaaaatcaatggccaaccaacggtgattgaagttaagattaaagaaaactactggcctatggtacttccttactcaaatctgataattaacattcatgcttttgggataattctttaatttaagacagaaatgagaactctttaattatgagatgcaaggcctgtttaatgtattgggtattggggaaaaaaaaaaaaaaaaaaaaaaaaaaaaatgccacattaggttgcgaatcgttcttggagccaaacgtttttcggagcgaaacgtcccgtt
gi|10 : gtgcgggacgttcgctccaaaatagttttcgctccaagacgattcgctccaaaagacctttcgctcacggaaaaaaa-----T-T-TCG-G--A--G-C-G-AA-TC-A-T-C--T----------T--G-G-----A-G---------------------CG-AA-------------A-AG-T--C-TTT--C-G-G--A-GC-G-AA-A-G-G-TCCCG
gi|10 : gAC-A--T-----T-T-T-G-G--G--G-C-T-AA-CC-G-C-C--T----------TTTG-G-----C-G---------------------CG-AA-------------A-CA-C--C-TTT--C-G-G--A-GC-G-AA-T-C-A-TCggtgtttcgcgccaaaaggcggttagccccaaaatgtttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|10 : gcgggacctttcgctccgaaagacttttcgctccaaGTTTCG-C-----GC-CA--A-AA--GGCG-G--TT-AGCC--CC--AA---AAT-G-T---TTCGC---TA-GC-ATTAA-TG-TTTGTT-TGA-TA-A-T-TAT-T--T-GATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-A-T-TCAAA-AGAT---TTTTAA-A-ACTGTT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAG--TA--AA--CGG--A---TACA------CCATTTG-AAA---------CTATT-----------AA-C-G-G-T--G-A-TT-A--------------A-AG-TA-------AACTA-T-GGCCATA---GTACT--C--TTACTCAAAATCTGATAATttcgctagcattaatgtttgtttgataattatttgatattattttgtcttttgatattcataccgaattcaaaagatttttaaaactgtttatgatgtaaaagtaatgaagcacagtaaacggatacaccatttgaaactattaacggtgattaaagtaaactatggccatagtactcttactcaaaatctgataat
gi|11 : gcgggacctttcgctccgaaagacttttcgctccaagatgattcgctccgaaaggtAC-G--TC----T-T-TCG-G--A--G-C-G-AA-TG-G-T-C--TACCCC-----C--G-G-----C-G---------------------CC-GC-------------C-CG-T--C-TTT--CGG-G--A-GCGG-AA-A-A-G-TCCCG
gi|11 : gtgC-G--TC----T-T-TCG-G--C--G-CCG-AA-CC-G-T-C--C----------C--G-A-----A-GGCGGACACCTGTCTAAGGCCGCG-AA-------------AACG-T--C-TTT--C-G-G--A-GC-G-AA-tttcgcggccttagacaggtgtccgccttcgggacggttcggcgccgaaagacgagaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|11 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccaACGGTTCGGC-----GC-CG--A-AA--GACGAG--AC-CGCC--CC--AACGAA-T---T---ATCGC---TA-GCCA---G-TG-TTTGTC-TGATTA-A-T-TAT-TC-T-AATAAAAC----------T-TTGT--CTTTTTT-GATA--------TTCAAT--ACTTG---ATT-T-TTGAC-AGAT---TTATA------TG-T-TATAATGT-A---AACAG-T-A-------GT-GAGAACAGGTCAA---A--AA---GG--AT--TTCA------C-----A-agaccgccccaacgaattatcgctagccagtgtttgtctgattaattattctaataaaactttgtcttttttgatattcaatacttgatttttgacagatttatatgttataatgtaaacagtagtgagaacaggtcaaaaaggatttcacacatac
gi|12 : gtgcgggacttttccgctcccgaaagacgggcggcgccgggggtagaccattcgctccgaaagacgttttcgcggccttagacaggtgtccgccttcgggC-G--TC----T-T-TCG-G--C--G-C-G-AA-CC-G---C--T----------C--G-A-----G-G---------------------CG-AACCGGCTGGGCGCAA-CG-T--C-TTT--C-G-G--A-GC-G-AA-catac
gi|12 : gtgggggacttttcgcaacgaagagtttcgcgctagcaCGGTTCG-C-----GC-CG--A-AA--GACG-G--TT-CGCC--CA--AG---A-T-A-T---ATCG----TA-G--G---T-TT-TTTGTCTTGA-T--A-T-TAT-T--T-TATAAAAC----------T-T--T--T--TTTT-GATA--------TTC-AT--AC-TG---A-TCT-TTTGA-AGAA---TTTTAA-A---TGTT-AATAATGT------A-AG-T-A-------GT-GA-A-CA---GGA--TA--AA---AG--A---TCCA------C-----A-gttcgcccaagatatatcgtaggttttttgtcttgatattattttataaaacttttttttgatattcatactgatcttttgaagaattttaaatgttaataatgtaagtagtgaacaggataaaagatccacatacaagtca
gi|13 : gtgggggacttttcgcaacgaagagtttcgcgctagcattcgctccgaaagacgttgcgcccagccggttcgcctcgag-GCT---TGGGA-GCG--AAA-CT------C-----T-T-TCG-G--A--G-C-G-AA-TC-G-T-C--T----------T--G-G-----A-G----------------------G-AA-------------A-CG-T--tacaagtca
gi|13 : GTTTCG-C-----TC-CC--A-AG--CCCC-G--TT-AGCC--CC--AA---ACT-G-T---TTCCCAAGTA-GC-A-----TG-TT-GT--TGA-TATA-TCTAG-T--T-TATATTAT----------T-TTGCTCC--TTTT-GATA--------TTC-AT--A--CG---A-A-T-TTAAA---AT---TTT--A-A-ACTTTT-TATGATGT-AAACAA-AGTT-A-------ATAGA-AGCA---CAA--TA--AA--CGG--A---T---------C-----A-AAA-----------ACT-----------AA-CGG-G-T--GCA-TT-G--------------A-AG-TA-------AACTATC-TGCCATAcccgttagccccaaactgtttcccaagtagcatgttgttgatatatctagtttatattattttgctccttttgatattcatacgaatttaaaattttaaactttttatgatgtaaacaaagttaatagaagcacaataaacggatcaaaaactaacgggtgcattgaagtaaactatctgccatagt
gi|14 : acgtttcctccaagacgattcgctccgaaagaC-G--T-----C-TGTTG-G--A--G-C-G-AA-TC-A-T-C--C----------T--G-G-----A-G---------------------CG-AA-------------A-CG-T--C-TTT--T-G-G--A-GC-G-AA-gt
gi|14 : AC-A--T-----T-T-T-G-G--G--G-C-T-AA-CC-G-T-C--TGT--------T--G-G-----A-G---------------------CG-AA-------------T-CA-T--C-CT-----G-G--A-GC-G-AA-A-C-G-TCgttagccccaaaatgtttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|14 : ttcgctccaaaaTTCG-C-----TC-CA--A-CA--GACG-G--TT-AGCC--CC--AA---AAT-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-C--T-AATTTTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CG---A-T-T-TTAAA-AGAC---TTTTAA-A-ACTGCT-TATGATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAATT-----------AA-ttcgctagcaatgtttgtctgataattatctaattttattttgtcttttgatattcataccgattttaaaagacttttaaaactgcttatgatgtaaaagtaatgaagcacaataaagggattcacaaaacaattaataaatgccaatcaacgg
gi|15 : ttcgctccaaaagacgtttcgctccaggatga--T-----T-T-TCG-G--A--G---G-AA-TG-GGT-C--T----------CT-G-G-----C-G---------------------CG-CA---------------CG-TT-C-TTT--G-G-G--A-GC-G-AA-T-A-G-TCCCGtaaatgccaatcaacgg
gi|15 : agtgC-G--T-----C-C-TCGAG--G--G-C-G-AA-CC-A-T-C--T----------G--G-G-----G-G---------------------CG-AA-------------A-CG-T--CTTTT--C-G-G--A-G--G-AA-gacgtttcgcccccagatggttcgccctcgaggacgggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|15 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccaTTCG-C-----GGGCG--AGAA--GACG-GGTTT-AGCC--CC--AA---A-TAG-T---ATCGC---TA-GC-G---A-T--TGTGTC--GA-TA------------T-GATATTGTAAGTTAAAAAC-TTGT--C--TTTT-GATA----------C-AT--AC-GGTATG-T-T-TTGAA-Aggttcgcgggcgagaagacgggtttagccccaaatagtatcgctagcgattgtgtcgatatgatattgtaagttaaaaacttgtcttttgatacatacggtatgttttgaaaa
gi|16 : agtgcgggactattcgctcccaaagaacgtgcgcgccagagacccattcctccgaaaagacgtttcgcccccagatggttcgccctcgaggacggg--T-----T-T-TCG-GGAG--G-C-GAAA-TG-G-T-C--T----------T--G-G-----C-G---------------------CG-AA-------------A-AC-T--C-TTT--T-G-G--A-GC-G-TA-A---G-TCCCGa
gi|16 : cgG-A--G--G-C-G-AA-CC-G-T-C--C----------T--G-G-----A-GGGCT-----------------CG-AA---------------CG-T--CTTTT--C-G-GGAG-GC-G-AA-A-T-G-gacgttcgagccctccaggacggttcgcctctgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|16 : cgcgggacttacgctccaaaagagttttcgcgccaagacACGGTTCGAC-----GC-CGGTA-AA--GACG-G--TTTAGTCTCCC--AAG--A-CAG-T---ATCGC---TA-GCCG---A-TGGTTTGTT-TGA-TA-A-T-TAC-TTGT-AATAAAAC----------T-TTGT--C--TTTT-tgacggttcgacgccggtaaagacggtttagtctcccaagacagtatcgctagccgatggtttgtttgataattacttgtaataaaactttgtctttttaaaaatc
gi|17 : cgcgggacttacgctccaaaagagttttcgcgccaagaccatttcgcctcccgaaaagacgttcgagccctccaggacggttcgcctctg--AA---A-T-G-T-----AGC---TA-GG-C---A-TG-GTTGTC-TGAGTT-C-T-TAT-T--T-ATTAT-AT----------TCTTGT--CATCTTT-GAAT--------TTC-AT--AC-CA---T-T-T-TCAAA-AGAT---TTTTAA-A-AAGGGC-TA----GT-A---AA-AG-T-AT------AT-----GCA---CAAGCTA--AA--GGG--AT--TTCAACAAATC-----A-AAATGGATATGCCAACC-----------AATC-G-GAA--G-A-TT-A--------------AGAG-AA-------AACTA-CGCGCCtaaaaatc
gi|18 : --C--TTACTCAAAATCCCATAATTA-CATC--TGT-----GGATT--ATT-TT-TAACTTT------CGGAGACATAA-T-GAGA-C-TGCTATAATTA------------CCAGTGC-ATT-T--ATTCATCAT--AT-----TTGCGAGTA-TTG------------------AA-AAATAGCA----GGGATGTT--AAA-TTAT-G--TATAGGT-TGTCG-G--G--G------A-TC-G-T-
gi|19 : ac-CATC--TGCT---GGGATT--ATT-TTCTAA--TAA-----TAGAGACATAA-TTGAGA-C-T-CTTTAAT-ATGCATCGTA-TGCCAG-CC-GTT-TCTAT--AATAT--AT-----TTG-GGGTAGTTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTAC-A--T-----T-A-TAG-G--T--G-C-G-AA-TC-G-T-C--T----------T--G-G-----A-
gi|2 : tt-G-AA-TC-G-T-C--T----------T--G-------A-G---------------------CA-AA----------------G-T--C-TTT--C-G-G--A-GC-G-AAGA-C-G-TCCCG
gi|2 : gGTTTCG-CCT---GCACG--A-AAAGGGCG-G--TT-AGCA--ACG-AA---A-T---T---TTCG----TA-GC-A---A--G-TTTGTC-TGA-TA-A-T-TAC-T--T-TACATGGC----------A-TTGT--C--TTAT-AAT---------TTC-AT--AC-CGTG-A-TCT-TTAAATAGAT---TTTTAA-A--CGGAT-TA-------------------A-------AC-AA-ATCA---CAA--TGCCAA--C----------CA------A-----A-GGG---------TGATT-----------GA-T-A-G-TAAG-A-TT-A--------------A-AG-AA-------AGCTA----GCCATATTGGTACT--CATTTACTCAAAATCTGATAATTA-CATC--TGCT----GGATA--ATT-CT-TAA--TT------T-AAGACAGAA---GAGA-CTT-CTTTAATTATGAG----A-T-CAAGGCC-GTT-T--AT--AATGT--AT-----TT---GGTA-TTG------------------GA-AAAT-GCACCTTAGG-TG-C--GAA-T--C-G--------T-C-TAG-G--A--G-C-G-AA-TC-G-T-C--T----------T--G-G-----A-G---------------------CG-AA-------------A-CG-T--T-TTTTCT-G-G--A-GC-G-AA-A-CGG-TCCCGTTActcaaaagagtttcgcctgcacgaaaagggcggttagcaacgaaattttcgtagcaagtttgtctgataattactttacatggcattgtcttataatttcataccgtgatctttaaatagatttttaaacggattaaacaaatcacaatgccaaccaaagggtgattgatagtaagattaaagaaagctagccatattggtactcatttactcaaaatctgataattacatctgctggataattcttaatttaagacagaagagacttctttaattatgagatcaaggccgtttataatgtatttggtattggaaaatgcaccttaggtgcgaatcgtctaggagcgaatcgtcttggagcgaaacgttttttctggagcgaaacggtcccgtta
gi|20 : gcgggacgtcttcgctccgaaagactttgctcaagacgattcctcaaaagaC-A--T-----T-T-TTG-G--G--G-C-T-AA-CC-G-C-C--T----------TTTG-GC----G-G---------------------CG-AA-------------A-CGGT--C-TTT--C-G-A--A-AC-
gi|20 : CGTTTCG-CC----GC-CA--A-AA--GGCG-G--TT-AGCC--CCAAAA---A-TGG-T---TTCGC---TA-GC-----A-TG-TTTCTC-TGA-TA-A-T-TAT-T--T-GATA--------------T-TTGT--C--TTTgtttcgctagcatgtttctctgataattatttgatatttgtctttacagtattaat
gi|21 : gtttcgaaagacTACAG--T-----C-T-TTG-G--CAGG-C-G-AA-TC-G-TAC--T----------T--G-G-----ACG---------------------CGAAA-------------A-CG-T--C-acagtattaat
gi|22 : gg-TTG------------------AA-AAAT-GCA---TGGGATTTT--AAA-TTAC-A--T-----T-G-TAG-G--A--G-C-G-AA-TC-G-T-CTTT----------T--G-G-----A-G---------------------TG-AA-------------A-CG-T--C-cgcccgagacggttgcgcggccaaaggcggtt
gi|23 : AC-G--TC----T-T-TTG-G--A--G-C-G-AA-TC-G-T-C--C----------T--A-G-----A-G---------------------CG-AA-------------A-CG-T--T-CTT--C-G-G--A-GC-G-AA-A-C-G-TCCCGc
gi|24 : gA-TTAC-A--T-----T-A-TAG-G--T--G-C-G-AA-TC-G-T-T--T----------C--G-G-----T-G---------------------TG-AA-------------C-CG-T--C-TTT--C-G-G--A-GT-G-AA-A-C-G-TCCCGttcgcg
gi|25 : ---------------------CG-AA-------------A-CG-T--C-TTT--C-G-G--A-GCAA-AA-A-C-G-TTCCG
gi|3 : agtgAC-G--TC----T-T-TCG-G--A--G-A-G-AAATC-G-T-CC-T----------T--G-G-----C-G---------------------AG-AA-------------A-CG-T--C-TTT--C-G-G--ATGC-GAAA-A-C-G-TCCCG
gi|3 : gtgTAC-GAAC-----T-T-TCG-G-------C-T-AA-CC-G-C-C--TTT--------C--G-GCCCCGG-G---------------------CG-AA-------------A-CG-T--C-TTT--C-G-G--A-GA-G-AA-ATC-G-TCCttcgcccggggccgaaaggcggttagccgaaagttcgtagcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|3 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaACGTTTCG-CCCGGGGC-CG--A-AA--GGCG-G--TT-AGCC------GA---A-A-G-T---T-CG----TA-GC-A---A-TG-TTTACT-TGA-TA-A-T-TAT-T--T-GATATT---------------TGT--C--TTTT-AAT-----------T-AT--AT-CG---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATGAAGC-A---AA-GC-T-A-------AT-GA-AGCA---CAA--TA--AA--CGG--AT--TTCA------C-----A-AAA---------CAATT-----------AA-A-G-GTT--G-A-TTGG--------------A-AG-TA-------AACTA-C-CGCCATGT-AGTACT--C--TTACTCAAAATC-GAT-ATTA-CATC--TGCT---GGGATT--ATT-TT-C-A--TT------TGGAGGAATAA-T-GAGA-C-T-CTTTAATTATGAG----ATTGCCA-GCC-GTT-T--AT--AATAT--ACATGTATTG-GGGTA-TTG------------------AATAAAT-GTA---TGGGATGTTAAAAA-TCAC-A--T-----TGTATAG-G--T--G-C-G-AA-TC-G-T-C--T----------T--G-G-----A-G---------------------Cgcaatgtttacttgataattatttgatatttgtcttttaattatatcgaatttaaaagatttttaaaactgtttatgaagcaaagctaatgaagcacaataaacggatttcacaaaacaattaaaggttgattggaagtaaactaccgccatgtagtactcttactcaaaatcgatattacatctgctgggattattttcatttggaggaataatgagactctttaattatgagattgccagccgtttataatatacatgtattggggtattgaataaatgtatgggatgttaaaaatcacattgtataggtgcgaatcgtcttggagc
gi|4 : gtgcgggacgttttcgcatccgaaagacgtttctcgccaaggacgatttctctccgaaagACGTTTCGGC-----GC-CG--A-AA--GTCG-GC-TT-AGCC--TCAGAA---A-T-GAG---TTAGCA--TG-TC-A---A-TG-TTC-TC-TGA-TA-A-T-TATAT--TGAATATTAT----------T-TTG
gi|4 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagTTGA-ATATTATT-T-TG--GT-A---AA-A--T-A-------AT-GA-AGCA---CAA--TA--AATACGG--A---TTCA------C-----ACAAA---------TTATT-----------A--C-GAG-T--G-AGTT-GC-------------A-AG-AATAATATAAATTA-C-CGCC-CAT-AGTACT--C--TTACTCAAAATCTGATAAT-A-CATC--TGCT---GGGACTGTATT-TT-TAA--TT------TGGAGACATAA-T-GAG--C-T-CTTTAATTGCGAG----A-TGCCAGGCC-GTTAT--AT--AATATGAAT-----T----GGTACTTG------------------AA-AAAT-GCA---TGGGATGTG--AAATTTAC-A--T-----T-A-TAG-A--G--T-C-G-AA-TT-G-T-T--C----------T--G-G-----A-G---------------------CG-AA-------------A-CG-T--gtaaaataatgaagcacaataaatacggattcacacaaattattacgagtgagttgcaagaataatataaattaccgcccatagtactcttactcaaaatctgataatacatctgctgggactgtatttttaatttggagacataatgagctctttaattgcgagatgccaggccgttatataatatgaattggtacttgaaaaatgcatgggatgtgaaatttacattatagagtcgaattgttctggagcgaaacgt
gi|5 : agtgcggggactttcctgctcgcaaaagacgttgtcggctcagccaaactgaccgagtctccttgctcccggggggtcgaaagacgtttcggcgccgaaagtcggcttagcctcagaaatgagttagcatgtcaatgttctctgataattata-TCAC-A--C-----C-T-TAG-G--C--GGC-G-AA-CC-G-T-C--T----------C--A-A-----G-G---------------------CG-AA---------------CG-T--CGTTT--G-G-G--A-GC-G-AA-
gi|5 : aACGGTTCG-CC----GC-CT--A-A---GGTG----TG-AGCC--CC--AA-----T-G-T---TCC-----TA-GCTA---A-TG-TTTGTC-TGA-TA-AGT-TAT-T--T-CATATTAT----------TATTGT--C--TTTTTGATA--------TTC-AT--AC-TG---A-T-T-ATAAA-AAAAAAATTTTAATA-ACTGTT-TATGATGT-A---AA-AG-T-A-------AA-GG-GATT---TAC--TA--AA--CAA--A---T---------C-----A-ATG---------CTACC-----------TA-C-G-G-T--G-A-TC-GAGTAAGATGCAAGAA-AG-AA-------AACTA-C-CGCCATAgccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|5 : attcgctcccaaacgacgttcgccttgag-----T-C-TCA-G--A--G-C-T-CA-TCTA-T-C--T----------T--G-G-----A-A---------------------TG-AA---------------CA-T--T-TTT--CCGTG--A-GC-G-AA-A-A-ATTCCCATTACatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgtctcagagctcatctatcttggaatgaacatttttccgtgagcgaaaaattcccattacc
gi|7 : attcgctcccaaacgacgttcgccttgagacggttcgccgcctaaggtgtgagccccaatgttcctagctaatgtttgtctgataagttatttcatattattattgtctttttgatattcatactgattataaaaaaaaaattttaataactgtttatgatgtaaaagtaaagggatttactaaacaaatcaatgctacctacggtgatcgagtaagatgcaagaaagaaaactaccgccataatcaagatatggatttaaacattgttttcgatagatataattatgaaaacactgctgcgtggtttgggaaaatgcaatgtttcgcaccaaaagataggctaataatcgACGTTTCG-T-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---A-T-G-T---TTCAC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T--T-GATATTAT----------T-TTGT--C--TTTT-GATA--------TTC-AT--AC-CA---A-A-T-TTAAA-AGAT---TTTTAA-A-ACTGTT-TATAATGT-A---AA-AG-T-A-------AT-GA-AGCA---CAA--TA--AA--CAG--A---TTCA------C-----A-AAA---------CTATT-----------AA-T-G-G-T--G-A-TT-G--------------A-AGTCA-------AATTA-C-CGCCATAT---TACT--C--TTACTCAAAATCTGATAATTA-CATC--TGCT---GGGATT--ATT-TT-TAA--TT------TGGAGACATAA-T-GAGT-A-T-CTTTAATTATGAG----A-TGCCAGGCC-GTT-T--AT--AATAT---C-----TTG-GGGTA-CTG------------------AA-AAAT-GCA---TGGGATGTT--AAA-TTAC-A--T-----T-A-TAG-G--T--G-C-G-AA-TC-G-T-C--T----------C--G-G-----A-G---------------------CG-AA-------------C-TG-T--C-TTT--C-G-G--A-GC-G-AA-A-T-G-TCCCGTTACc
gi|8 : -----T-C-TCG-A--G--G-T-G-AA-AT-G-T-C--TTT--------C--G-G-----A-G---------------------CG-AA-------------T-CG-T--C-TT-----G-G--A-GC-G-AA-A-C-G-TCCCG
gi|8 : tg-----T-T-TCG-G--C--G-C-G-AA-CC-A-T-C--T----------C--G-A-----G-G---------------------TG-AA-------------A-TG-T--C-TTT--C-G-G--A-GC-G-AA-T-C-G-TCtggttcgcgccgaaaggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|8 : tgcgggacgtttcgctccaaTTCG-C-----GC-CG--A-AA--GGCG-G--TT-AGCC--CC--AA---AAT-G-T---TTCGC---TA-GC-A---A-TG-TTTGTC-TGA-TA-A-T-TAT-T--T-AATATTAT----------T-TTGT--C--TTTT-GATAATCAGATATTC-AT--AC-CC---A-T-T-TTAAA-AGAT---ATTTAA-A-ACTGT-----------A---AA-AG-T-A-------AT-AT-AGCA---CAG--TA--AA--GGG--A---TTCA------C-----A-AAA---------CAAATCACTGCCAACCAA-C-G-G-TAAG-A-TT-A--------------A-AG-AA-------AACTA-C-CGCCATGT-GATACT--C--TTACTCAAAATCTGATAATTG-TATC--TGCT---GGGATT--ATT-CT-TAA--TTTGCCAATGGAGAAATAA-T-GAGA-C-T-CTTTAATTATGggcggttagccccaaaatgtttcgctagcaatgtttgtctgataattatttaatattattttgtcttttgataatcagatattcatacccattttaaaagatatttaaaactgtaaaagtaatatagcacagtaaagggattcacaaaacaaatcactgccaaccaacggtaagattaaagaaaactaccgccatgtgatactcttactcaaaatctgataattgtatctgctgggattattcttaatttgccaatggagaaataatgagactctttaattatg
gi|9 : tgcgggacgtttcgctccaagacgattcgctccgaaagacatttcacctcgagatggAC-G--T-----T-T-TCG----A--G-C-G-A--TG-G-C-T--T----------T--G-G-------G---------------------CG-AA-------------A-CG-TTGC-TTT--T-G-G--G-GC-G-AA-A-A-G-TCCCG
gi|9 : cgtgAA-TTAT-G--TC----T-T-TCG-G--C--G-C-G-AAGCC-G-T-C--T----------C--G-A-----G-G---------------------CG--A-------------C-CG-T--C-T------G-G--G-GC-G--A-A-C-G-tcgccccagacggtcgcctcgagacggcttcgcgccgaaagacataattatcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
gi|9 : cgtgcgggacttttcgccccaaaagcaacgtttcgcccaaagccatcgctcgaaaGCTTCG-C-----GC-CG--A-AA--GACA-----T-A--------------A-T---T---ATCGC---TACGC-G---AGTG-TTTGTC-TGA-TA-AAT-TAT-T--T-AATAAAAC----------TAGTGT--C--CTTT-GATA--------TTC-AT--AC-TG---A-T-TATTTGA-AGA----TTTTA------TGTTCTATAATGTCA---AA-AG-T-AGGCTACTAT-TA---CA---TTA--TA--AA--CAT--AAACTTCA------------A-AAA---------AAATC-----------AC-C-T-A-T----A-GT-G--------------A-AG-AA-------atcgctacgcgagtgtttgtctgataaattatttaataaaactagtgtcctttgatattcatactgattatttgaagattttatgttctataatgtcaaaagtaggctactattacattataaacataaacttcaaaaaaaatcacctatagtgaagaaggataaaaggaattcacacataaaagaattttaaaacatcattgccga
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): AATGGCGCTCGTGCCGGTTGAGGAAGACTTTCATGCGAAAAGAACTAATTTTAATACAATAGCACCAAAACTAAGAATGCAAGCATTTTTTAACAAAAACACATGCCGCATGTGTGCCATCCATTCTCACACTTTTTTCACTTTGCTTATTTGTAATTTATGACAATGTCCATGTTTTGTTACTTCATTTTCTTTCACCATAATTGTTAATATTTCCATGATAGTTTCTCATAAGGACTGCTCACCTCTTCACTTGTCACATCAGCAATGCAAGTGAAAAGGATTTCCCTGCTCGATGGCTGACATTGTCATACCTCACAACCATTCATCATCCGATTACTGGGGGCAAAGAATTGAGTTGCGGAGACGAGTTTTTCGGCGCTCCAAAAGCACGTTTTTCTAGAC