lowQualScore : 11111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 1111111111111 11111 1111111 1 111 111 222222 111 111 3333333 11111 1111 22222222222222 11 2222 2222 6666666666666 111111111 11111111 11111 666666666666666 1111 555555555555 333 1 1 111 333 111 2222 11111111111111111111111111111111111111 2 111 2222 222222 111111 11 111 111 2 22222 111 22222 111111 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 11 22 1 22 111111111111111111111 1111 111111111111 11111111 111 22222222222 222222222222 11111111 11111 1 333333333 11111111111 11 11111111
lowQualScore : 3 7 3 66666666 3 44 999999 3 3 666 3 3 0 0 0 6666666666666 3 5 00000 5 5 5555555 5 5 1 77 000 4 000 5 5 777777 77 5 5 0 5 6666 5 5 77 111 6 6 111 99 1111111 8 8 77777 8 7777 5 88888888888888 11 2222 5555 6666666666666 888888888 99999999 0 8 66666 6 0 888888888888888 7777 5 8 8 8 0 8 8 8 111111111111 111 0 0 777 9 111 111 1111 44444444444444444444444444444444444444 3 0 111 3 3 2 4444 444444 3 999999 33 222 3 3 555 0 55555 222 11111 888888 8 0 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 9999 77 11 6 3 4 777 55 55 77 888888888888888888888 5555 5 2 33 2 5555 2 0000 7 666666666666 7 55 1 3 66666666 3 4 88 99 0 4 3 4 4 4 222 4 1 55555555555 4 4 5 66 5 66 4 222222222222 66 777 66666666 2 44444 4 4 0 0 000000000 3 6666 3 44 3 44444444444 0 3 44 3 3 6 66 4 4 3 3 8888888 888888 44 888888 2 2 00 2 2 888888 33 3 66666666 3 3 3 3
lowQualScore : . . . ........ . .. ...... . . ... . . . . . ............. . . ..... . . ....... . . . .. ... . ... . . ...... .. . . . . .... . . .. ... . . ... .. ....... . . ..... . .... . .............. .. .... .... ............. ......... ........ . . ..... . . ............... .... . . . . . . . . ............ ... . . ... . ... ... .... ...................................... . . ... . . . .... ...... . ...... .. ... . . ... . ..... ... ..... ...... . . ................................................................................................................... .... .. .. . . . ... .. .. .. ..................... .... . . .. . .... . .... . ............ . .. . . ........ . . .. .. . . . . . . ... . . ........... . . . .. . .. . ............ .. ... ........ . ..... . . . . ......... . .... . .. . ........... . . .. . . . .. . . . . ....... ...... .. ...... . . .. . . ...... .. . ........ . . . .
lowQualScore : 6 3 6 88888888 3 66 666666 1 1 666 3 1 4 6 5 5555555555555 3 0 99999 0 0 6666666 7 7 4 00 000 4 000 7 7 999999 99 7 7 7 7 3333 7 7 99 777 7 7 777 22 8888888 0 0 88888 0 4444 6 55555555555555 88 2222 0000 0000000000000 888888888 22222222 8 0 00000 7 6 444444444444444 0000 0 0 0 0 8 0 0 0 222222222222 000 0 0 555 8 222 000 2222 88888888888888888888888888888888888888 2 0 000 2 2 5 5555 555555 2 222222 22 888 0 2 000 0 00000 000 44444 222222 0 8 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8888 99 77 7 3 4 888 55 55 00 555555555555555555555 7777 0 7 77 7 3333 4 3333 3 888888888888 3 00 4 6 88888888 6 0 33 55 1 4 9 4 4 4 222 4 1 66666666666 4 4 0 99 0 99 4 888888888888 11 888 11111111 0 00000 0 0 8 4 111111111 1 5555 1 22 0 22222222222 5 3 66 3 3 7 11 4 4 6 3 0000000 888888 11 222222 9 9 33 7 7 222222 99 1 88888888 6 6 6 6
consensus : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAG--AC------ACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAA---T-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATT-AAT---TCGGTA---CTT-G-C------ATTT--G-ACATTA-TGAGCTCCACA-TAA-AA-T-AGC-AAA--T---TTCAGCAAGTTTA-GT-GA---ACAA--TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-C-AT---------ATA-AAAATTAACCAATGGTGGG-AATC-------------ACA-T-TA----TCAA--C-GA--CATC-TG--T-GTGGGGAAA-CCCAAAGTTTACATAG----------AGT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAAT-TTTTTTTT-CGANATTGCCC-TAAATT-ACT-----CAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------AAAATTG------TTA---AA-C--TA-----GC---NATAC-AT------ATT--AAAT---------ATATAA----A--ATATATA----------T-A-A-GGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTT--TT-GTTAATAT------T--A-----------GT----TTGAAA-G--ATACAT-C----CT-CTGTGTAAA----CTA-ACT------TT---ATG-GA--GCTTG-TACAGA--------CA-A-TTTCAAC--ACATAGCTTA-GTCTGTCGTTT-TT-AATT-CC---TGTACA-TCAAAGCAGCCT-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-G--G-T--AAATGAAGTGTCAAAA-T------------TGAC--A---CAT--------GCTCTGCACCTCAAT-----G-AC-AAAGCAGTCCAGC-G--TAATTTACACA-GAG----G-ATGTAT--CTTTCAAAC------T-A-GTATTATA-A--AT-ATCAA-CAAAAACAAAANG--TC-AA-TCGCCAC-TT-GTA----AATTTG------GTATCTC-GT------A-TCTCTG-TTTCT-GGTATC-T-GGT------GT--CTC-GTTTCT--------TCGT-A-TT-GCC-TTTTACACAC
Reference ( gi|2 ) : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAG--AC------ACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAA---T-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATT-AAT---TTGGTA---CTT-G-C------ATTT--G-ACATTA-TGAGCTCCACA-TAA-AA-T-AGC-AAA--T---TTCAGCAAGTTTA-GT-GA---ACAA--TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-C-AT---------ATA-AAAATTAACCAATGGT-G--AATC-------------ACA-T-TA----TCAA--T-GA--CATC-TG--T-ATGGGGAAA-CCCAAAGTTTACATAT----------AGT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTTA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAAT-TTTTTTTT-CGAAATTGCCC-TAAATT-ACT-----CAGCAT--TAGC--AATAATG-C----TGAA-ATTT--------AAAATTG------TTA---AA-C--TA-----GC---TATAC-AT------ATC--AAAT---------ATATAA----A--ATATATA----------T-A-A-GGGAGA-AATTAATGAATA-AACATGA-TTTCTC-AAA-CCT---TT--TGGTT--T--GTTAATAT------T--A-----------GT----TTGACA-G--ATACAT-C----CT-CTGTGTAAA----CTA-ACT------TT---ATG-GA--GCTTG-TACAGA--------CA-A-TTTCAAC--ACATAGCTTA-GTCTGTCATTT-TT-AATT-CT---TGTACA-TCAAAGCAGCCT-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-G--G-T--AAATGAAGTGTCAAAA-T------------TGAC--A---TAT--------GCTCTGCATCTCAAT-----G-AC-AAAGCATTCCAGG-A--TAATTTACACA-GAG----G-ATGTAT--CTTTCAAGC------T-A-GTATTATA-A--AT-ATCAA-CAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTA----AATTTG------GTATCTC-GT------A-TCTCTG-TTTCT-GGTGTC-T-GGT------GT--CTC-GTTTCT--------TCGT-A-TT-GCC-TTTTACACAC
gi|3 : GGTGTGTGTAAAA-GGCAA-T-ACGATTACGAGAAGAAAC-GAG--AC------ACC-A-GATA-CGAGAAA-CAG-GA-TACGAGATACCAGA--TTCCAA---T-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATT-AAT---TTGGTA---CTT-G-C------ATTT--G-ACATTA-TGAGCTCCACA-TAA-AA-T-AGC-AAA--T---TTCAGCAAGTTTA-GT-GA---ACAA--TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-C-AT---------ATA-AAAATTAACCAATGGTGG--AATC-------------ACA-T-TA----TCAA--T-GA--CATC-TG--C-GTGGGGAAA-CCCAAAGTTTA-ACAG----------AGT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCTCTATGCCTATTACTATTGTACGTACATGTAAATTA-TTTTGCACTTTTCAAAGTAAA-TGAAT----ACTGG-TGC--------TCATTTAA----A-----AAT--TTACTTTTCAAA-AAA-TAATATTT-ATATTTCT----TTTA-----AGCCAAT--AAT-TAA---T--TTTGAAATATATTTTCTTT----AATTTC-------TT-ACCTTTGACAGCAT--GAAC---ATAAGA-CTTTTTGAAGATTTTTTTTTTCGAAATTGCCCAAATTACTCAG-CATTA-----GC---AATA--ATGCTGAAATTGAAAATTGTTAAACTATACAATATAA--ATATATAAAAATATATAT-A-AAGGGAGA-AATT-ATGAATC-AAAATGATTTTCTCAAAA-CCT---TT--TGGTT--T--GTTAATAT------T--A-----------GT----TTGACA-G--ATACAT-C----CT-CTGTGTAAA----CTA-ACT------TT---ATG-GA--GCTTG-TACAGA--------CA-A-TTTCAAC--ACATAGCTTA-GCCTGTCGTTT-TT-AATT-CC---TGTACA-TCAAAGCAGCCT-----------GGGTCATAG-AGAGC
gi|1 : GGTGTGTGTAAAAAGGCAAATGACGA--------AGAAAC-GAG--AC------ACCGA-GATA-CGAGAAAACAGAGA-T-CGAGATACCAGA--TTCCAA---T-ACA-TAA-A---T-TTATTAATG-A--AAGCT-ATC-AATTTCATT-AAT---T-GGTAAACTTT-G-C------ATTT--G-ACATTA-TGAGCTCCACA-TAA-A--T-AGC-AAA--T---TTCAGCAAGTTTA-GT-GA---ACAACTTTT------AATTGCTT-CAA-CGTGACCTAAATTG-ATG-AACTTATCTGGT-AATGACAGA-CAAT---------AT--AAAATTAACCAATGGT-GGAAATCATCGACTTCCTATACA-TATACGGTTCAAGCC-GACTCA-C-TGGTT-GTGGGGAAATCCCAAAG-----ATATTGTCGCTAAGAGTGACGCAGTACTTT-AT-GT-ACTTGGGGTGATGA-CTTATCTCCTCGG-CT
gi|5 : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGTAAC-GAG--AC------ACC-A-GTCA-CCAGAAA-CAGAGA-TATGAAATA-CATG--TACCAATTTT-ACAAatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|10 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacGGTGTGTGTAAAA-GGCAA-T-ACAAC-------AGAAAC-GAG--AC------ATC-ATGATACCGAGATA-CAGAGATTACGAGATAC--------CTAA---TCACAATAACA-------ATTA-GGTA--A-TCTAATCTGATTT-ATTAAATCAATTAGTA---CTT-G-CA-----ATTT--G-ACATT--TCAGGTCCACA-TAACAA-TGAGCTAAA--T---TTCAACAAGTTTG-GTCGA---ACAA--TTTAATTCGAATTGCTTACAAGCGTGACC-----TA-ATG-A--TCATCTTGTAAATGACAGA-C-ATCATTTTTAGATACAAAAT------AT-GT-G--GATTTCA----------AAA-T-TC----TCAA--C-AC--CATG-TG--T-ATCGGGAAA-TGCAAAGTTcagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|9 : GTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAG--AC------ACC-A-GATA-C-------CAG---------GATACCAAA--TT-------T-ACAA
gi|20 : ctctgtgtaaactaactttatggagcttgtgcagacaatttcaacacatggcttagtctgttgtttttaattcctgtacatcaaagcagcctgggtcaaagagagcagtttagagccagtccgatgtggtaaatgaagtgtcaaaattgacatatatgctctgcacctcgatgacaaagcagtccagcgtatttacacagaggatgtatctttcaagcgagtattataaatatcaacaaaaacaaaacgtcaatcgccacGTGTGTGTAAAA-GGCAA-T-ACGA--------CGAAAC-GAG--GC------ACC-A-GATA-CGAG
gi|1 : TGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGCAACCGGCAAAAC-A-GACACCCAGAAA-CAGAGA-TACGAGATACCAAA--TT-------T-ACAA
gi|7 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-CAG--AC------ACC----------AGAAA-CAGAGA-TAAAAGATACCA
gi|6 : ccttttggttttgttaaaattagtttggcagatatatcctctgtgtaaactaactttgtagaacttgtacagacaatttcaaaacatatcttagtctgtctttcttaatccctgtacatcaaagggtcacagagagcagtttagagccagtccgatgtggtaaatgaagtgtttaaattgacacatgctctgcacctcaataacaaaacagtacagcatatttacacaggggatatatctttcaacctagtattataaatatcaacaagaacaaagtcaatcgccacttgtaaaaTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAA--GAG--AA------ACC-A-GATA--GAGAAA-C--AGA-TACGAGATACCA-A--TTT------T-ACAA
gi|8 : aaatgctgattagacagttgctcatgctggattttgcataagcataatgctaaaattttgaaaatgtttcaactatattataaagtgagagaattataaatccaacatgatttctcaaacctttgttgtttttggttgatattcaagtttgaaagatacatcctctgcataaaatactaacttatgtgagcttggtgcaggtcattgcttagtctgtcatttttatttctgtacaatcaaagcagccctcgtcacaggagagcagtttagaaccagatccgatgttggttaaaataaaatgtcaaaaattgacacatgctctgcatctcaataaacaaagcagtccagcatatttaccagggatgtaactttcaaactaagcgttacataatatcaacaaaaacaaaaggtcaaatcgccactTGTGGGTAAAA-G-CAA-T-ACGA--------AGAA-C-GAG--AC------ACC-A-GACA-C--------AGAGA-TACAA
gi|4 : gtttgacataatacacttccttgtaaactaacttttgtgggcttgtacggataaatttcaactgcataagttaagtctgctgtcggttaatcctgttacttaaagcagattgggtcacagaggggaatttagagccagtgatttggtaaatgaagtgtcaaaattgacacgtgctcgcacaacatcgacaaaagcaagtcagcgtaatacacaggggatgtataattttcaaactaggtattatcaataatcaacaaaaagagtcaatctccacttgtaaatGTGTGTAAAA-GGCAAAT-ACAA--------AGAAACAGAT--AC------ACC-A-GATA-CGAGAAA-C-GAAA--AC------CCAGAAATACCAA---T-ACAATAA-A---T-T-ATTA-TG-ACCA-GCT-ATC-AATTT-ATT-AAT---TCGGTA---CTTTG-CC-----ATTTTGA-ACATTA--GAGCTCCACAATAA-AA-T-AGC-AAGATT---TTCAGCAAATTTAAGT-GA---ACAA--TA-------AATTGCTT-CAA-CGTGACC----TTGAATGAACTTCATAATGTAAATAACAGATC-AT---------AT
gi|12 : AC-GAG--AC------ACC-A-GATA-CAAGAAA-CAGAGA-T--------------------------ACAATGA-A---T-T-ATTG-TG-A--A-ACT-ATC-AATTT-ATT-CAA---TCGGTA---CTT-G-C------ATTT--G-ACATTA-TCAGCTCCACA-TAA-AA-T-ACC-AAA--T---TCAAGCAAGTTTA-GT-GA---GCAA--TTTA-----AAGTGCTT-CAG-TATGATC----TTG-GT--------TTTG-----TG--AG---------------ATG-AAAA------AATGGCGG--AATC-------------ACATT-TA----TTCA--TCAA--CATCATG--T-GTGGGAATA-TGCAAAGTTGAC-TG-----------GGT----AAGTA-TTttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|19 : CC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACGAGA--TTCCAA---T-AAAATCA-A---T-T-ATTA-T
gi|15 : AAA-CACAAGA-ACCGAA--TAACAG---A-ATAATAA-AAAGTGT-GCTA-TG--------T-GTC-AATTTTATT-CAA---TCCGTA---CTG-G-TCAACCAATTT--G-ACATTATTCAGCTCCGGA-TAA-TA-T-AG--AAA--TATACTCGGCAGGTTTG-CT-GAGGTACAA--CT
gi|18 : GAGAAGCCAGA--T-CCAA---T-ACAATAA-A---T-T-ATTA-TG-A--G-ACT-ATT-AATTT-AT---AT---TTGGTA---CTT-GAC------ATTT--GTACATTA-TGA-CTCCACA-TAA-AGTT-AGC-AAA--
gi|4 : ACAAA-C-AA---------ACA-AAAA--AACCAATGGT-GG-AATCC------------ACAAT-TA----TCAA--T-GA--CATC-TG--TGGTGGGGAAC-CCAAAAGTTTAC--AG----------AGT----CA-TA-TTTAATGGTAACCTTGGGTGGTTCGCTT-TCTCCAGGGTTTGCT------------TT
gi|16 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaGGGAAA-CCCAAAGTTTACAGA------------GT----CATTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|17 : T-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTTGG-TTGCT------------CTATgcctattacagtgtatatatagtattgaacatacatgt
gi|1 : GTGCCT-CATTTAAA-AAATTT---ACTTT-CAACT-AAA-T-AATTCTTATTAA-TATGAGGCTCTCTCTCTAATGTCG---CACATAA---AGTTTGAAATATAATTTTCTTTTA-ATTTCTTAACTTTGGTATCAGC--ATG-AACATAA-ACTGTTTTGAAGATT-TTTTTTTTTCGAAATTGCCCCTAAATTTACT-----CAGCAT--TAGC--AATAATGGC----TGAA-ATGT--------GGAATTG------TTA---AAAC--TA------CATGTATAC-AT------AT---AAAT---------ATATAA----A--ATAT-TA----------T-ACA-GGGA----ATTA-TGAATC-AACATGA-TTTCTC-AAAACCT---TT--TGGTT--TT-GTTAATGT------T--A-----------GT----TTGACA-G--ATA-AT-C----CT-CTGTGTAAA----CTA-ACT------TT----TG-GAAGGCTTG-T-CAGA--------CA-A-TAT-ATC--ACATAGCTTA-GTCTGTCGTTT-TTTAATTTCTG--TGTACA-TCAAAGCAGCCTT----------GGGTCACAG-AGG--AGTTTAGAGCCA--TCCG-TGT-G--GGT--AGATGAAGTGTCAAAA-T------------TGAC--A---TATCTATGTATGCTCTGCATC--AAT-----G-AC-AAAGCAGTCCAAGCG--TA--TTACACA-GAG----GGATGTAT--CTTTCA-GC------T---GTATTATA-AGAAT-ATTAA-CAAAA-CAAGAAG--TC-AAATTGCAAC-TTTGTA----AATTTG------GTATCTC-GT------A-TCTCTG-TTTCTGGGTGTC-T-GTTTTGCCGGTTGCTC-GTTTCT--------TCGT-A-TT-GCC-TTTTACACACgcctatattacagtgcatatatagtataatttttgtacgtacatgtaaattattttg
gi|4 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactgGTGC-T-CATTTAAA-AA-TTT---ACTTTTTAA---AAAAT-AAT----ATTTAATAT--------TTCTTTAA----GAAGCCAGTAATTAATTTTGAAATATATTTTTCTTT-A-A-TTCTTACCTTTGA---CAGCA-ATGAAACATAAGACT--TTTGAAGAAT-TTTTTTTT-CAACA-TGCCC-TAAATTAACT-----CAGTATTATAGCA-AATAATG-C----TGAA-ATTG--------AAAATCT------TTA---AA-C--TATACATGT---AATACTAT------ATT-----T---------ATATTA----T--ATATATA----------T-A-A---GATA-TATAAAGGAATC-AACATGA-ATTTTCAAAA-CCT---TT--TGGTT--TTGGTTAATATTACGGGT--A-----------GT----TTGAa
gi|5 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactgA-AA-TTT---ACTTTATAA---AAA-T-AAT----ATTT------------------------------CA----TTAATTTTGAAATATA-TTTTCATT-A-ATTTCTTACCTTTGA---CAGC--ATC-AACATAAGAGT--TTTGAAGAA--CTTTTTTT-CGACATTGCCA-TAAACT-ACT-----CATTAT--TAATTGAA-AATG-T----TTAA-A-CT--------ATACCTG-------TA---TA-T--TT-----GC---TATAT-AT------ATT--ATAT---------GCATAA----GCTATATATA----------TAA-A-GAGAGA-AATT-ATAAATC-AACATGA-TTTCTG-AAA-CCTTCCTT--TGGGT--T---TTAacaaa
gi|6 : attgtacatgtgaattattttgcactttttgaatttgtaaattcGCAT--AAGC--A-TAATG-C----TAAA-ATTTTG------AAAAT-G------TT-------------------------------------TC--AACT---------ATAT------------TATA------------A-A-GTGAGAGAATTA-TAAATCCAACATGA-TTTCTC-AAA-CCT---TTGTTGTTT--TTGGTTGATAT------TCAA-----------GT----TTGAAA-G--ATACAT-C----CT-CTGCATAAAATA-CTA-ACT------T----ATGTGA--GCTTGGTGCAGG--------TC-A-TT------------GCTTA-GTCTGTCATTT-TT-ATTT-CT----GTACAATCAAAGCAGCCC-----------TCGTCACAGGAGAGCAGTTTAGAACCAGATCCGATGTTG--G-TTAAAATAAAATGTCAAAAAT------------TGAC--A---CAT--------GCTCTGCATCTCAATA----A-AC-AAAGCAGTCCAGC-A--T-ATTTAC-CA-G-G----G-ATGTAA--CTTTCAAAC------TAA-GCGTTACATA--AT-ATCAA-CAAAAACAAAAGG--TCAAA-TCGCCACTTT-GTA----AAATTG------GTATCTC-GT------A---TCTG-TTTCT--CTATC-T-GGT------TT--CTC--TTTCT--------TCGT-A-TT-GCC-TTTTACACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|13 : aaatgctgattagacagttgctcatgctggattttATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TAGTT--TA-GTTAAAAT------T--A-----------GT----TTGACA-A--ATACAT-C----CT-CTGTGTA-------------------------TG-GA--GCTTG-TACAAA--------CA-A-TTTCAAC--ACATAGCTTA-GTCTGTCGTTT-TT-AATT-CCTCATGTACA-TCAAAGCAGACT-----------GGCTCACAG-AGAGCAGTTTAGAGCCAG-TCCGAa
gi|1 : tA-CTT---CT--TGTTT--T--GTTAATATTCTTA-T--A-----------ATACAGCTGAAA-G--ATACATCC----CT-CTGTGTAA
gi|6 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtaA-CCT---TT--TGTTT--TT-GTTGATAT------T--ATGTAACGCTTAGT----TTGAAA-G--TTACAT-C----C--CTG-GTAAA----caaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|7 : aaatgctgattagacagttgctcatgctggattttgcataagcataatgctaaaattttgaaaatgtttcaactatattataaagtgagagaattataaatccaacatgatttctcaaacctttgttgtttttggttgatattcaagtttgaaagatacatcctctgcataaaatactaacttatgtgagcttggtgcaggtcattgcttagtctgtcatttttatttctgtacaatcaaagcagccctcgtcacaggagagcagtttagaaccagatccgatgttggttaaaataaaatgtcaaaaattgacacatgctctgcatctcaataaacaaagcagtccagcata-CCT---TT--TGGTT--TT-GTTAAAAT------T--A-----------GT----TTGGCA-G--ATATAT-C----CT-CTGTGTAAA----CTA-ACT------TT---GTA-GA--ACTTG-TACAGA--------CA-A-TTTCAAA--ACATATCTTA-GTCTGTCTTTC-TT-AATC-CC---TGTACA-TCAAA------------------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-G--G-T--AAATGAAGTGTTTAAA-T------------TGAC--A---CAT--------GCTCTGCACCTCAAT-----A-AC-AAAACAGTACAGC-A--T-ATTTACACA-GGG----G-ATATAT--CTTTCAACC------T-A-GTATTATA-A--AT-ATCAA-CAAGAACAAA--G--TC-AA-TCGCCAC-TT-GTA----AA-ATG------GTATCTT-TT------A-TCTCTG-TTTCT-GGTGTC-T-G----------------GTTTCT--------TCGT-A-TT-GCC-TTTTACACACcaaatcgccactttgtaaaattggtatctcgtatctgtttctctatctggtttctctttcttcgtattgccttttacacaca
gi|8 : T--TGATTATT--GATAATACC-----T--A-----------GT----TTGAAA-ATTATACAT-C----CC-CTGTGTAa
gi|9 : gtttgacataatacacttccttgtaaactaacttttgtgggcttgtacggataaatttcaactgcataagttaagtctgctgtcggttaatcctgttacttaaagcagattgggtcacagaggggaatttagagccagtgatttggtaaatgaagtgtcaaaattgacacgtgctcgcacaacatcgacaaaagcaagtcagcgtaaTAATAC------T--C-----------GC----TTGAAA-G--ATACAT-C----CT-CTGTGTAAA----caaaaagagtcaatctccacttgtaaatttgtatctctgtgtctggtgtctcgttcttcgtattgcttttacccaca
gi|7 : ctctgtgtaaactaactttatggagcttgtgcagacaatttcaacacatggcttagtctgttgtttttaattcctgtacatcaaagcagcctgggtcaaagagagcagtttagagccagtccgatgtggtaaatgaagtgtcaaaattgacatatatgctctgcacctcgatgacaaagcagtccagcgtaTAATAC------T--A-----------GG----TTGAAA-G--ATATAT-C----CC-CTGTGTAAATATGCTGTACTGTTTTGTT---ATT-GA--G---G-TGCAGAGCATGTGTCA-A-TTTAAAC--ACtaaatatcaacaaaaacaaaacgtcaatcgccacttgtaaatttggtatcctggtatctggtgtctcgtttcttcgtattgccttttacacacac
gi|5 : ccttttggttttgttaaaattagtttggcagatatatcctctgtgtaaactaactttgtagaacttgtacagacaatttcaaaacatatcttagtctgtctttcttaatccctgtacatcaaagggtcacagagagcagtttagagccagtccgatgtggtaaatgaaTAATAT------T--A-----------GT----TTGAAA-G--ATACAT-T----CC-CTGTGTAAA----taaatatcaacaagaacaaagtcaatcgccacttgtaaaatggtatcttttatctctgtttctggtgtctggtttcttcgtattgccttttacacaca
gi|14 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggataTAATAC------T--A-----------GC----TTGAAA-G--ATACAT-C----CT-CTGTGTAAA----taaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|11 : aattgacatatgctctgcacctcaatgacaaagcagtccagcgta------T--A-----------GT----TTGTAA-G--ATACAT-CACATCTCCTGTGTAAA-----TATGCT------TTGTCATT-GA--G---G-TACAGAG-------CATA-TGT-------CATA--TTA-G-ATGTCAATT-TT-GACA-CT---Ttaaatatcaacaaaaacaaaacgtcaatcgccacttgtaaatttggtatctctgtttctggtgtctcgttctttg
gi|8 : tgcagatacatcctctgcatgtgtaaactaactaacatagcttagtctgttgtttttaattcctgtacatcaaagcagaatggggagttcgagggtcacagagagcagtttagagccagtccgatgcggtaaacg-----------GT----TTGACATA--ATACA--C----TT-CCTTGTAAA----CTA-ACT------TT----TGTGG--GCTTG-TACGGA--------TA-AATTTCAACT-GCATAAGTTAAGTCTGCTGTCGGTT-AATC-CT---GTTAC--TTAAAGCAGATT-----------GGGTCACAG-AGGGGAATTTAGAGCCAG-T--GATTT-G--G-T--AAATGAAGTGTCAAAA-T------------TGAC--A---CGT--------GCTC-GCACAACATC-----G-ACAAAAGCAAGTCAGC-G--TAA--TACACA-GGG----G-ATGTATAATTTTCAAAC------T-AGGTATTATC-A--ATAATCAA-CAAAAAGA----G--TC-AA-TCTCCAC-TT-GTA----AATTT---------------GT------A-TCTCT---------GTGTC-T-GGT------GT--CTC-G-TTCT--------TCGT-A-TT-G-C-TTTTACCCACcatgtagtattataaatatcaacgaaaacaagacgtcaatcgccacttgtaaaatttctctatttctggtgtcttgtttc
gi|11 : CA-G--ATACAT-C----CT-CTGC---------------------------ATG--------TG-TA-------------A-A-CT--AACTAACATAGCTTA-GTCTGTTGTTT-TT-AATT-CC---TGTACA-TCAAAGCAGAATGGGGAGTTCGAGGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGC-G--G-T--AAACGAAGTGTCAAAA-TTGACATCTAATATGAC--A---TAT--------GCTCTGTACCTCAAT-----G-AC-AAAGCAT------------ATTTACACAGGAGATGTG-ATGTAT--CTTACAAACTACATGT-A-GTATTATA-A--AT-ATCAA-CGAAAACAAGACG--TC-AA-TCGCCAC-TT-GTA----AAATT-------------------------TCTCTA-TTTCT-GGTGTC-T---T------GT--TTC-a
gi|9 : tg----CT-CTGTGTAAA----CTA-ACT------TT---ATG-GA--GCTTG-TGCAGA--------CA-A-TTTCAAC--ACATGGCTTA-GTCTGTTGTTT-TT-AATT-CC---TGTACA-TCAAAGCAGCCT-----------GGGTCAAAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-G--G-T--AAATGAAGTGTCAAAA-T------------TGACATA---TAT--------GCTCTGCACCTCGAT-----G-AC-AAAGCAGTCCAGC-G--T-ATTTACACA-GAG----G-ATGTAT--CTTTCAAGC------G-A-GTATTATA-A--AT-ATCAA-CAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTA----AATTTG------GTATC-----------------------CT-GGTATC-T-GGT------GT--CTC-GTTTCT--------TCGT-A-TT-GCC-TTTTACACAC
gi|21 : T-CTATATAAA----CTA-ACT------TT---GTG-GA--GCTTG-TACAGA--------CA-ac
gi|5 : aA-TCAAAGCAGCCT-----------GGGTCACAG-AGAGCAGTT-AGAGCCAG-TCCGATGT-G--G-T--TAATGAAGTGTCAAAA-T------------TGAC--A---CAT--------GCTCTGCATCTCAAT-----G-AC-AAAGCAGTCCAGG-A--T-ATTTACACA-GGG----A-ATGTAT--CTTTCAAAC------T-A-ATATTATA-A--AT-ATCAA-CAAAAAAAAAAAGAATC-AA-TCGTCAC-TT-GTA----AAATTGGTACATGTATTTC-AT------A-TCTCTG-TTTCT-GGTGAC-T-GGT------GT--CTC-GTTACT--------TCGT-A-TT-GCC-TTTTACACAC
gi|13 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAGCCAG-TCTGCTTT-GATG-T--ACATGAGGAATTAAAA-A------------CGAC--AGACTAA--------GCTATGTGTTGAAATTGTTTGTAC-AA-GC--TCCA-----------TACACA-GAG----G-ATGTAT--TTGTCAAAC------T-A---ATTTTA-A--CT-A--AA-CTAAAAacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|14 : tatgaatcaacatgatttctcaaaccAA-T------------TGAC--A---TAT--------GCTCTGCACCTCAAT-----G-AC-AAAGCAGTCCAGC-G--TA-TTTACACA-GAG----G-ATGTAT--CTTTCAAGC------T-A-GTATTATA-A--AT-ATCAA-CAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTA----AATTTG--------------GT------A-TCTCTG-TTTCT-GGTGTC-T-CGT-------T--CTacagagagcagtttagagccagtccga
gi|1 : T-----G-AC-AA-GCCTTCCAAA-AGTTAGTTTACACA-GAG----G-AT-TAT--CTGTCAAAC------T------------A--AC-ATTAA-CAAAACCAAAAGG--Tttg
gi|3 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaa--TAGTTTACACA-GAG----G-ATGTAT--CTGTCAAAC------T-A-ATATTAgacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|7 : ggtgtgtgtaaaaggcaatacgattacgagaagaaacgagacaccagatacgagaaacaggatacgagataccagattccaatacaataaattattatgaagctatcaatttattaatttggtacttgcatttgacattatgagctccacataaaatagcaaatttcagcaagtttagtgaacaatttaattgcttcaacgtgaccttgatgacttcatctggtaaatgacagacatataaaaattaaccaatggtggaatcacattatcaatgacatctgcgtggggaaacccaaagtttaacagagtcagtatttatgtaaccttgggtggtgcctttctcctcggttgctctatgcctattactattgtacgtacatgtaaattattttgcacttttcaaagtaaatgaatactggtgctcatttaaaaatttacttttcaaaaaataatatttatatttcttttaagccaataattaattttgaaatatattttctttaatttcttacctttgacagcatgaacataagactttttgaagattttttttttcgaaattgcccaaattactcagcattagcaataatgctgaaattgaaaattgttaaactatacaatataaatatataaaaatatatataaagggagaaattatgaatcaaaatgattttctcaaaaccttttggtttgt--TAGTTTACACA-GAG----G-ATATAT--CTGCCAAAC------T-A---ATT-----------TTAA-CAAAACCAAAAactttatggagcttgtacagacaatttcaacacatagcttagcctgtcgtttttaattcctgtacatcaaagcagcctgggtcatagagagc
gi|6 : cc--TATTTTATGCA-GAG----G-ATGTAT--CTTTCAAAC------T---------TG-A--AT-ATCAACCAAAAACAAactttgtagaacttgtacagacaatttcaaaacatatcttagtctgtctttcttaatccctgtacatcaaagggtcacagagagcagtttagagccagtccgatgtggtaaatgaagtgtttaaattgacacatgctctgcacctcaataacaaaacagtacagcatatttacacaggggatatatctttcaacctagtattataaatatcaacaagaacaaagtcaatcgccacttgtaaaatggtatcttttatctctgtttctggtgtctggtttcttcgtattgccttttacacaca
gi|10 : aaatgctgattagacagttgctcatgctggattttgcataagcataatgctaaaattttgaaaatgtttcaactatattataaagtgagagaattataaatccaacatgatttctcaaacctttg-AA-TTGTTA--TT-GTG----A-TTAG------GTATCTC-GT------AATCTCTG-TATCTCGGTATCAT-GAT------GT--CTC-GTTTCTG-------TTGT-A-TT-GCC-TTTTACACACctaacttatgtgagcttggtgcaggtcattgcttagtctgtcatttttatttctgtacaatcaaagcagccctcgtcacaggagagcagtttagaaccagatccgatgttggttaaaataaaatgtcaaaaattgacacatgctctgcatctcaataaacaaagcagtccagcatatttaccagggatgtaactttcaaactaagcgttacataatatcaacaaaaacaaaaggtcaaatcgccactttgtaaaattggtatctcgtatctgtttctctatctggtttctctttcttcgtattgccttttacacaca
gi|3 : ggt-TT-GTATTGGAATCTG------GTATCTC-GT------A-TC-CTG-TTTCT-CGTATC-T-GGT------GT--CTC-GTTTCTTCTCGTAATCGT-A-TT-GCC-TTTTACACACaggtaatctaatctgatttattaaatcaattagtacttgcaatttgacatttcaggtccacataacaatgagctaaatttcaacaagtttggtcgaacaatttaattcgaattgcttacaagcgtgacctaatgatcatcttgtaaatgacagacatcatttttagatacaaaatatgtggatttcaaaattctcaacaccatgtgtatcgggaaatgcaaagtt
gi|4 : ggt-TT-GTA-------TTG------GTATTTCTGG------G-TTTTCG-TTTCT-CGTATC-T-GGT------GT--ATCTGTTTCT--------TTGT-A-TTTGCC-TTTTACACACtaaattattatgaagctatcaatttattaatttggtacttgcatttgacattatgagctccacataaaatagcaaatttcagcaagtttagtgaacaatttaattgcttcaacgtgaccttgatgacttcatctggtaaatgacagacatataaaaattaaccaatggtggaatcacattatcaatgacatctgcgtggggaaacccaaagtttaacagagtcagtatttatgtaaccttgggtggtgcctttctcctcggttgctctatgcctattactattgtacgtacatgtaaattattttgcacttttcaaagtaaatgaatactggtgctcatttaaaaatttacttttcaaaaaataatatttatatttcttttaagccaataattaattttgaaatatattttctttaatttcttacctttgacagcatgaacataagactttttgaagattttttttttcgaaattgcccaaattactcagcattagcaataatgctgaaattgaaaattgttaaactatacaatataaatatataaaaatatatataaagggagaaattatgaatcaaaatgattttctcaaaaccttttggtttgttaatattagtttgacagatacatcctctgtgtaaactaactttatggagcttgtacagacaatttcaacacatagcttagcctgtcgtttttaattcctgtacatcaaagcagcctgggtcatagagagc
gi|1 : T-GTA-------TTG------GAATCTG-GTATCTCGA-TCTCTGTTTTCT-CGTATC-TCGGT------GT--CTC-GTTTCT--------TCGTCATTT-GCCTTTTTACACACtaaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|19 : ggt----AATCTC------GTATCTC-GT------A-TCTCTG-TTTCT-CGTATC-T-GGtaaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|12 : TT-GT------A-TCTCTG-TTTCT-TGTATC-T-GGT------GT--CTC-GTccaataaaatcaattattat
gi|20 : CT-CGTATC-T-GGT------GC--CTC-GTTTCG--------TCGT-A-TT-GCC-TTTTACACACtgaattattgtgaaactatcaatttattcaatcggtacttgcatttgacattatcagctccacataaaataccaaattcaagcaagtttagtgagcaatttaaagtgcttcagtatgatcttggttttgtgagatgaaaaaatggcggaatcacatttattcatcaacatcatgtgtgggaatatgcaaagttgactgggtaagtatt
Alignments
lowQualScore : 1 33333333 1111 1111111 1 11111 22222222 111 111 222222 1111 2222222222 1 11 4444444444444 1 2222 1111 444444444444 1111 444444444444 222 111 222 1111 555555555555555555555555555555555555 1 1111 11 11 1 11 111 1 11 1111 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 11 1 111111 11 11 22222222222 222222222222 11111111 11 111111 111111111111111 1111111
lowQualScore : 6 3 6 00000000 5 5 5 5 5 5 2 4 1 0000 4 4 88888 4 4 0000000 5 5 0 0 22222 888 5 11111111 66 5 5 5 5 5 5 5 66 000 5 5 000 55 000000 6 6 4444 6 9999 3 5 8888888888 3 44 777 3333333333333 3 6 0000 99 0000 99 6 5 111111111111 4444 2 6 6 6 6 6 6 111111111111 111 8 8 444 6 555 8 8 7777 222222222222222222222222222222222222 0 0 6 8 8 0 0 7777 99 33 0 0 11 0 8 222 0 8 3 6 99 55 6 4444 6 7 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 3 6 1 2 6 22 5 5 1 5 888 66 0 55 5 666666 77 9 5 777 0 44 4 55 4 4 33 00 4 4 4 777 00 4 33333333333 4 4 5 5 66 5 222222222222 66 66666666 0 4 4 0 0 4 77 4 1 9999 4 66 4 222222 555 4 66 4 4 66 4 4 4 4 5 999999999999999 0 4 2 1 3333333 66
lowQualScore : . . . ........ . . . . . . . . . .... . . ..... . . ....... . . . . ..... ... . ........ .. . . . . . . . .. ... . . ... .. ...... . . .... . .... . . .......... . .. ... ............. . . .... .. .... .. . . ............ .... . . . . . . . ............ ... . . ... . ... . . .... .................................... . . . . . . . .... .. .. . . .. . . ... . . . . .. .. . .... . . ................................................................................................. . . . . . .. . . . . ... .. . .. . ...... .. . . ... . .. . .. . . .. .. . . . ... .. . ........... . . . . .. . ............ .. ........ . . . . . . .. . . .... . .. . ...... ... . .. . . .. . . . . . ............... . . . . ....... ..
lowQualScore : 7 3 7 88888888 7 0 0 0 7 0 9 7 1 0000 4 4 77777 4 4 1111111 0 0 0 8 99999 888 0 44444444 99 0 0 0 0 0 0 0 99 000 7 7 000 99 222222 7 7 2222 7 8888 2 7 0000000000 3 55 222 3333333333333 3 7 8888 22 0000 22 7 7 333333333333 2222 5 7 7 7 7 7 7 000000000000 000 0 0 000 0 000 0 0 0000 888888888888888888888888888888888888 8 8 0 0 0 8 8 8888 00 00 8 0 00 8 0 000 8 0 8 0 22 88 7 2222 7 3 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 3 7 0 5 7 33 7 7 4 0 888 99 1 44 7 444444 99 0 0 000 7 44 0 55 0 4 00 66 4 4 4 888 66 0 00000000000 0 4 0 0 99 0 888888888888 11 11111111 9 4 4 1 1 4 33 4 4 4444 4 11 1 888888 333 4 11 4 1 11 4 4 4 4 1 666666666666666 1 4 7 1 9999999 11
consensus : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------GAAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATT--AAAT--------------ATATAA---------A--ATATATAT-A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAA---ACTAACTTT-ATG-GA--GCTT-GTACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCGTTT-TT-AATTCC---TGT--AC-ATCAAAGCAGCCT-----------GGGTCACA-GAGAGCAGTTTAGAGCCAG-TCCGATG-TGG-T--AAATGAAGTGTC-AAAAT------------TGAC--ACAT--------GCTCTGCACCTCAAT-GAC-AAAGCAGTCCA-GCGTAATTTACACA-GAG----G-ATGTAT--CTTTCAAGC------T-A-GTATTATA-A--AT-ATCAACAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
Reference ( family-262 ) : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGGAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------AAAATTG------TTA---AA-C--TA-----GCNATAC-AT------ATT--AAAT--------------ATATAA---------A--ATATATAT-A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGAAA-GATACATCCTCTGTGTAA---ACTAACTTT-ATG-GA--GCTT-GTACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCGTTT-TT-AATTCC---TGT--AC-ATCAAAGCAGCCT-----------GGGTCACA-GAGAGCAGTTTAGAGCCAG-TCCGATG-TGG-T--AAATGAAGTGTC-AAAAT------------TGAC--ACAT--------GCTCTGCACCTCAAT-GAC-AAAGCAGTCCA-GCGTAATTTACACA-GAG----G-ATGTAT--CTTTCAAAC------T-A-GTATTATA-A--AT-ATCAACAAAAACAAAANG--TC-AA-TCGCCAC-TT-GTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTATCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|1 : GGTGTGTGTAAAAAGGCAAATGACGA--------AGAAAC-GAGACACCGA-GATA-CGAGAAAACAGAGA-T-CGAGATACCAGA--TTCCAAT-ACA-TAA-A---T-TTATTAATG-A--AAGCT-ATC-AATTTCATTAATT-----GGTAAACT-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-A--T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAACTTTT-----AATTGCTT-CAA-CGTGACCTAAATTG-ATG-AACTTATCTGGT-AATGACAGA-CA----------ATATAAAATTAACCAATGGTGGAAATCATCGACTTCCTATACA-TATACGGTTCAAGCCGAC-TCAC-TGGTTG-TGGGGAAATCCCAAAG---ATATTGTCGCTAAGAGTGACGCAGTACTTTA-TG-T-ACTTGGGGTGATGA-CTTATCTCCTCGG-CT
gi|1 : GTGCCT-CATTTAAA-AAATTT---ACTTT-CAACT-AAA-T-AATTCTTATTAA-TATGAGGCTCTCTCTCTAATGTCG---CACATAA---AGTTTGAAATATAATTTTCTTTTA-ATTTCTTAACTTTGGTATCAGC--ATG-AACATAA-ACTGTTTTGAAGATTTTTTTTTTTCGA--AATTGCCCCTAAATTTACTCAGCAT--TAGC--AATAATGGC----TGAA-ATGT--------GGAATTG------TTA---AAAC--TACAT--G-TATAC-AT------AT---AAAT--------------ATATAA---------A--ATAT-TAT-ACAGGGA----ATTA-TGAATC-AACATGA-TTTCTC-AAAACCT---TT--TGGTTTT-G-TTAATGT------T--AGTTTGACA-GATA-ATCCTCTGTGTAA---ACTAACTTT--TG-GAAGGCTT-GT-CAGACAA-TAT-ATC--ACATAGCTTA-GTCTGTCGTTT-TTTAATTTC---TGTGTAC-ATCAAAGCAGCCTT----------GGGTCACA-GAGG--AGTTTAGAGCCA--TCCG-TG-TGGGT--AGATGAAGTGTC-AAAAT------------TGAC--ATATCTATGTATGCTCTGCA--TCAAT-GAC-AAAGCAGTCCAAGCGTA--TTACACA-GAG----GGATGTAT--CTTTCAG-C------T---GTATTATA-AGAAT-ATTAACAAAA-CAAGAAG--TC-AAATTGCAAC-TTTGTAAATTTG------GTATCTCGTATCTCTGTTTCTGGGTGTCTGTTTTGCCGGTTGCTCGTTTCTTCGTATTGCCTTTTACACACatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|10 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactgGGTGTGTGTAAAA-GGCAA-T-ACAAC-------AGAAAC-GAGACATC-ATGATACCGAGATA-CAGAGATTACGAGATAC--------CTAATCACAATAACA-------ATTA-GGTA--A-TCTAATCTGATTT-ATTAAATCAATTAGTA---C-TTG-CA-----ATTT--G-ACATT--TCAGGTCCAC-ATAACAA-TGAGCTAAA--T---TTCAACAAGTTT-GGTCGA---ACAA-TTTAATTCGAATTGCTTACAAGCGTGACC-----TA-ATG-A--TCATCTTGTAAATGACAGA-CATCATTTTTAGATACAAAAT------AT-GTGGATTTCA------------AAA-T-TC----TCAA--CACCAT--G-TG--TA-TCGGGAAA-TGCAAAGTTa
gi|11 : A-GATACATCCTCTGC-----------------ATG--------T-GTA-----AA-CT--AACTAACATAGCTTA-GTCTGTTGTTT-TT-AATTCC---TGT--AC-ATCAAAGCAGAATGGGGAGTTCGAGGGTCACA-GAGAGCAGTTTAGAGCCAG-TCCGATG-CGG-T--AAACGAAGTGTC-AAAATTGACATCTAATATGAC--ATAT--------GCTCTGTACCTCAAT-GAC-AAAGCA-T---------ATTTACACAGGAGATGTG-ATGTAT--CTTACAAACTACATGT-A-GTATTATA-A--AT-ATCAACGAAAACAAGACG--TC-AA-TCGCCAC-TT-GTAAAATT-----------------TCTCTATTTCT-GGTGTCT--T------GT--TTC
gi|12 : tgcAC-GAGACACC-A-GATA-CAAGAAA-CAGAGA-TAC-----------------------AATGA-A---T-T-ATTG-TG-A--A-ACT-ATC-AATTT-ATTCAATC----GGTA---C-TTG-C------ATTT--G-ACATTA-TCAGCTCCAC-ATAA-AA-T-ACC-AAA--T---TCAAGCAAGTTT-AGT-GA---GCAA-TTTA-----AAGTGCTT-CAG-TATGATC----TTG-GT--------TTTG-----TG--AG--------------ATG-AAAA------AATGGC-GGAATC-------------ACATT-TAT---TCAT--CAACAT--CATG--TG-TGGGAATA-TGCAAAGTTGAC-T---------GGGT----AAGTA-TT
gi|13 : ATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TAGTTTA-G-TTAAAAT------T--AGTTTGACA-AATACATCCTCTGTG--------------T-ATG-GA--GCTT-GTACAAACAA-TTTCAAC--ACATAGCTTA-GTCTGTCGTTT-TT-AATTCCTCATGT--AC-ATCAAAGCAGACT-----------GGCTCACA-GAGAGCAGTTTAGAGCCAG-TCCGA
gi|14 : tAAT------------TGAC--ATAT--------GCTCTGCACCTCAAT-GAC-AAAGCAGTCCA-GCGTA-TTTACACA-GAG----G-ATGTAT--CTTTCAAGC------T-A-GTATTATA-A--AT-ATCAACAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTAAATTTG-------------GTATCTCTGTTTCT-GGTGTCTCGT-------T--CT
gi|15 : AAA-CACAAGA-ACCGAA--TAACAGA-ATAATAA-AAAGTGT-GCTA-TG--------T-GTC-AATTTTATTCAATC----CGTA---C-TGG-TCAACCAATTT--G-ACATTATTCAGCTCCGG-ATAA-TA-T-AG--AAA--TATACTCGGCAGGTTT-GCT-GAGGTACAA-CTttg
gi|16 : GGGAAA-CCCAAAGTTTACA----------GAGT----CATTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTAT
gi|17 : TA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTTGG-TTGCT------------CTATgcctattacagtgtatatatagtattgaacatacatgt
gi|18 : GAGAAGCCAGA--T-CCAAT-ACAATAA-A---T-T-ATTA-TG-A--G-ACT-ATT-AATTT-AT--ATTT----GGTA---C-TTGAC------ATTT--GTACATTA-TGA-CTCCAC-ATAA-AGTT-AGC-AAA--gcctatattacagtgcatatatagtataatttttgtacgtacatgtaaattattttg
gi|19 : CC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACGAGA--TTCCAAT-AAAATCA-A---T-T-ATTA-T
gi|2 : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----A-TTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTG--AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--TA-TGGGGAAA-CCCAAAGTTTACAT--------ATAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTTA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--AATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTT--------AAAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATC--AAAT--------------ATATAA---------A--ATATATAT-A-AGGGAGA-AATTAATGAATA-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTT--G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAA---ACTAACTTT-ATG-GA--GCTT-GTACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCATTT-TT-AATTCT---TGT--AC-ATCAAAGCAGCCT-----------GGGTCACA-GAGAGCAGTTTAGAGCCAG-TCCGATG-TGG-T--AAATGAAGTGTC-AAAAT------------TGAC--ATAT--------GCTCTGCATCTCAAT-GAC-AAAGCATTCCA-GGATAATTTACACA-GAG----G-ATGTAT--CTTTCAAGC------T-A-GTATTATA-A--AT-ATCAACAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|20 : GTGTGTGTAAAA-GGCAA-T-ACGA--------CGAAAC-GAGGCACC-A-GATA-CGAG
gi|21 : TCTATATAA---ACTAACTTT-GTG-GA--GCTT-GTACAGACA
gi|3 : aGGTGTGTGTAAAA-GGCAA-T-ACGATTACGAGAAGAAAC-GAGACACC-A-GATA-CGAGAAA-CAG-GA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGT-GGAATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--CG-TGGGGAAA-CCCAAAGTTTA-AC--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCTCTATGCCTATTACTATTGTACGTACATGTAAATTA-TTTTGCACTTTTCAAAGTAAA-TGAAT----ACTGG-TGC--------TCATTTAA----A-----AAT--TTACTTTTCAAA-AAA-TAATATTT-ATATTTCT----TTTA-----AGCCAAT--AAT-TAA---T--TTTGAAATATATTTTCTT-TAATTTCTTACCT-TTGA------CAGCAT--GAAC---ATAAGA-CTTTTTGAAGATTTTTTTTTTCGAAATTGCCCAAATTACTCAG-CATTA-----GCAATA--ATGCTGAAATTGAAAATTGTTAAACTATACAATATAAATATATAAAA--ATATATATAA-AGGGAGA-AATT-ATGAATC-AAAATGATTTTCTCAAAA-CCT---TT--TGG-TTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAA---ACTAACTTT-ATG-GA--GCTT-GTACAGACAA-TTTCAAC--ACATAGCTTA-GCCTGTCGTTT-TT-AATTCC---TGT--AC-ATCAAAGCAGCCT-----------GGGTCATA-GAGAGC
gi|4 : GTGTGTAAAA-GGCAAAT-ACAA--------AGAAACAGATACACC-A-GATA-CGAGAAA-C-GAAA--AC------CCAGAAATACCAAT-ACAATAA-A---T-T-ATTA-TG-ACCA-GCT-ATC-AATTT-ATTAATTC----GGTA---CTTTGCC------ATTTTGA-ACATTA--GAGCTCCACAATAA-AA-T-AGC-AAGATT---TTCAGCAAATTTAAGT-GA---ACAA---TA-----AATTGCTT-CAA-CGTGACC----TTGAATGAACTTCATAATGTAAATAACAGATCAT---------AT
gi|4 : ACAAA-CAA---------ACA-AAAA--AACCAATGGTGGAATCC-------------ACAAT-TA----TCAA--TGACAT--C-TG--TGGTGGGGAAC-CCAAAAGTTTACA----------GAGT----CA-TA-TTTAATGGTAACCTTGGGTGGTTCGCTT-TCTCCAGGGTTTGCT------------TTttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|4 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaGTGC-T-CATTTAAA-AA-TTT---ACTTTTTAA---AAAAT-AAT----ATTTAATAT--------TTCTTTAA----GAAGCCAGTAATTAATTTTGAAATATATTTTTCTTT-A-A-TTCTTACCTTTGA---CAGCA-ATGAAACATAAGACT--TTTGAAGAATTTTTTTTT-CAA--CA-TGCCC-TAAATTAACTCAGTATTATAGCA-AATAATG-C----TGAA-A-TTG-------AAAATCT------TTA---AA-C--TATACATGTAATACTAT------ATT-----T--------------ATATTA---------T--ATATATAT-A-A--GATA-TATAAAGGAATC-AACATGA-ATTTTCAAAA-CCT---TT--TGGTTTTGG-TTAATATTACGGGT--AGTTTGAAccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|5 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactgA-AA-TTT---ACTTTATAA---AAA-T-AAT----ATT---------------TC-------------------ATTAATTTTGAAATATA-TTTTCATT-A-ATTTCTTACCTTTGA---CAGC--ATC-AACATAAGAGT--TTTGAAGAA-CTTTTTTT-CGA--CATTGCCA-TAAACT-ACTCATTAT--TAATTGAA-AATG-T----TTAA-A--CT-------ATACCTG-------TA---TA-T--TT-----GCTATAT-AT------ATT--ATAT--------------GCATAA---------GCTATATATATAA-AGAGAGA-AATT-ATAAATC-AACATGA-TTTCTG-AAA-CCTTCCTT--TGGGTTT-caaa
gi|5 : attgtacatgtgaattattttgcactttttgaatttgtaaattc-ATCAAAGCAGCCT-----------GGGTCACA-GAGAGCAGTT-AGAGCCAG-TCCGATG-TGG-T--TAATGAAGTGTC-AAAAT------------TGAC--ACAT--------GCTCTGCATCTCAAT-GAC-AAAGCAGTCCA-GGAT-ATTTACACA-GGG----A-ATGTAT--CTTTCAAAC------T-A-ATATTATA-A--AT-ATCAACAAAAAAAAAAAGAATC-AA-TCGTCAC-TT-GTAAAATTGGTACATGTATTTCATATCTCTGTTTCT-GGTGACTGGT------GT--CTCGTTACTTCGTATTGCCTTTTACACACtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|6 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAT--AAGC--A-TAATG-C----TAAA-ATTTT-------GAAAATG------TT----------------------------------TC--AACT--------------ATAT-----------------TATA--A-AGTGAGAGAATTA-TAAATCCAACATGA-TTTCTC-AAA-CCT---TTGTTGTTTTT-GGTTGATAT------TCAAGTTTGAAA-GATACATCCTCTGCATAAAATACTAAC-TT-ATGTGA--GCTTGGTGCAGGTCA-TT------------GCTTA-GTCTGTCATTT-TT--ATTTC---TGT--ACAATCAAAGCAGCCC-----------TCGTCACAGGAGAGCAGTTTAGAACCAGATCCGATGTTGG-TTAAAATAAAATGTCAAAAAT------------TGAC--ACAT--------GCTCTGCATCTCAATAAAC-AAAGCAGTCCA-GCAT-ATTTAC-CA-G-G----G-ATGTAA--CTTTCAAAC------TAA-GCGTTACATA--AT-ATCAACAAAAACAAAAGG--TCAAA-TCGCCACTTT-GTAAAATTG------GTATCTCGTA--TCTGTTTCT--CTATCTGGT------TT--CTC-TTTCTTCGTATTGCCTTTTACACACacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|7 : aaatgctgattagacagttgctcatgctggatttt-CCT---TT--TGGTTTT-G-TTAAAAT------T--AGTTTGGCA-GATATATCCTCTGTGTAA---ACTAACTTT-GTA-GA--ACTT-GTACAGACAA-TTTCAAA--ACATATCTTA-GTCTGTCTTTC-TT-AATCCC---TGT--AC-ATCAAA------------------GGGTCACA-GAGAGCAGTTTAGAGCCAG-TCCGATG-TGG-T--AAATGAAGTGTT-TAAAT------------TGAC--ACAT--------GCTCTGCACCTCAAT-AAC-AAAACAGTACA-GCAT-ATTTACACA-GGG----G-ATATAT--CTTTCAACC------T-A-GTATTATA-A--AT-ATCAACAAGAACAAA--G--TC-AA-TCGCCAC-TT-GTAAA-ATG------GTATCTTTTATCTCTGTTTCT-GGTGTCTG---------------GTTTCTTCGTATTGCCTTTTACACACa
gi|8 : GTTTGACATAATACA-CTTCCTTGTAA---ACTAACTTTTGTG-G---GCTT-GTACGGATAAATTTCAACT-GCATAAGTTAAGTCTGCTGTCGGTT-AAT-CC---TGTT-AC--TTAAAGCAGATT-----------GGGTCACA-GAGGGGAATTTAGAGCCAG-T--GATT-TGG-T--AAATGAAGTGTC-AAAAT------------TGAC--ACGT--------GCTC-GCACAACATC-GACAAAAGCAAGTCA-GCGTAA--TACACA-GGG----G-ATGTATAATTTTCAAAC------T-AGGTATTATC-A--ATAATCAACAAAAAGA----G--TC-AA-TCTCCAC-TT-GTAAATTT--------------GTATCTCT--------GTGTCTGGT------GT--CTCG-TTCTTCGTATTG-CTTTTACCCACa
gi|9 : CTCTGTGTAA---ACTAACTTT-ATG-GA--GCTT-GTGCAGACAA-TTTCAAC--ACATGGCTTA-GTCTGTTGTTT-TT-AATTCC---TGT--AC-ATCAAAGCAGCCT-----------GGGTCAAA-GAGAGCAGTTTAGAGCCAG-TCCGATG-TGG-T--AAATGAAGTGTC-AAAAT------------TGACATATAT--------GCTCTGCACCTCGAT-GAC-AAAGCAGTCCA-GCGT-ATTTACACA-GAG----G-ATGTAT--CTTTCAAGC------G-A-GTATTATA-A--AT-ATCAACAAAAACAAAACG--TC-AA-TCGCCAC-TT-GTAAATTTG------GTATC--------------CT-GGTATCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACACa
Alignments
lowQualScore : 1 33333333 1111 1111111 1 11111 22222222 111 111 222222 1111 2222222222 1 11 1 4444444444444 1 2222 1111 444444444444 1111 444444444444 222 111 222 1111 555555555555555555555555555555555555 1 1111 11 11 1 11 111 1 11 1111 88888888888888888888888888888888888888888888888888888888888888888888888888 222222222 3333333333333 11 1 111111 11 111 11111111111 1 222222222222 11111111 11 111111 11 111111111111111 1111111
lowQualScore : 6 3 6 00000000 5 5 5 5 5 5 2 4 1 0000 4 4 88888 4 4 0000000 5 5 0 0 22222 888 5 11111111 66 5 5 5 5 5 5 5 66 000 5 5 000 55 000000 6 6 4444 6 9999 3 5 8888888888 3 44 1 3333333333333 3 6 0000 99 0000 99 6 5 111111111111 4444 2 6 6 6 6 6 6 111111111111 111 8 8 444 6 555 8 8 7777 222222222222222222222222222222222222 0 0 6 8 8 0 0 7777 99 33 0 0 11 0 8 222 0 8 3 6 99 55 6 4444 6 1 88888888888888888888888888888888888888888888888888888888888888888888888888 333333333 2222222222222 6 1 2 6 22 5 5 1 5 888 66 0 55 5 666666 77 5 777 44 4 55 4 4 33 00 4 4 4 333 4 4 4 99999999999 4 4 0 66 4 222222222222 66 66666666 0 4 4 0 0 4 77 4 55 9999 66 222222 555 00 4 3 66 8 8 5 999999999999999 0 4 1 3333333 66
lowQualScore : . . . ........ . . . . . . . . . .... . . ..... . . ....... . . . . ..... ... . ........ .. . . . . . . . .. ... . . ... .. ...... . . .... . .... . . .......... . .. . ............. . . .... .. .... .. . . ............ .... . . . . . . . ............ ... . . ... . ... . . .... .................................... . . . . . . . .... .. .. . . .. . . ... . . . . .. .. . .... . . .......................................................................... ......... ............. . . . . .. . . . . ... .. . .. . ...... .. . ... .. . .. . . .. .. . . . ... . . . ........... . . . .. . ............ .. ........ . . . . . . .. . .. .... .. ...... ... .. . . .. . . . ............... . . . ....... ..
lowQualScore : 7 3 7 88888888 7 0 0 0 7 0 9 7 1 0000 4 4 77777 4 4 1111111 0 0 0 8 99999 888 0 44444444 99 0 0 0 0 0 0 0 99 000 7 7 000 99 222222 7 7 2222 7 8888 2 7 0000000000 3 55 3 3333333333333 3 7 8888 22 0000 22 7 7 333333333333 2222 5 7 7 7 7 7 7 000000000000 000 0 0 000 0 000 0 0 0000 888888888888888888888888888888888888 8 8 0 0 0 8 8 8888 00 00 8 0 00 8 0 000 8 0 8 0 22 88 7 2222 7 7 88888888888888888888888888888888888888888888888888888888888888888888888888 777777777 7777777777777 7 0 5 7 33 7 7 4 0 888 99 1 44 7 444444 99 0 000 44 0 55 0 4 00 66 4 4 4 999 4 0 0 00000000000 0 4 0 99 4 888888888888 11 11111111 9 4 4 1 1 4 33 4 99 4444 11 888888 333 66 4 9 11 9 9 1 666666666666666 1 4 1 9999999 11
consensus : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
Reference ( family-262 ) : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|1 : GGTGTGTGTAAAAAGGCAAATGACGA--------AGAAAC-GAGACACCGA-GATA-CGAGAAAACAGAGA-T-CGAGATACCAGA--TTCCAAT-ACA-TAA-A---T-TTATTAATG-A--AAGCT-ATC-AATTTCATTAATT-----GGTAAACT-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-A--T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAACTTTT-----AATTGCTT-CAA-CGTGACCTAAATTG-ATG-AACTTATCTGGT-AATGACAGA-CA----------ATATAAAATTAACCAATGGTGGAAATCATCGACTTCCTATACA-TATACGGTTCAAGCCGAC-TCAC-TGGTTG-TGGGGAAATCCCAAAG---ATATTGTCGCTAAGAGTGACGCAGTACTTTA-TG-T-ACTTGGGGTGATGA-CTTATCTCCTCGG-CT
gi|1 : GTGCCT-CATTTAAA-AAATTT---ACTTT-CAACT-AAA-T-AATTCTTATTAA-TATGAGGCTCTCTCTCTAATGTCG---CACATAA---AGTTTGAAATATAATTTTCTTTTA-ATTTCTTAACTTTGGTATCAGC--ATG-AACATAA-ACTGTTTTGAAGATTTTTTTTTTTCGA--AATTGCCCCTAAATTTACTCAGCAT--TAGC--AATAATGGC----TGAA-ATGT--------G-GAATTG------TTA---AAAC--TACAT--G-TATAC-AT------AT-AAA-----------TATATA----AA--ATAT-T----AT-------ACAGGGA----ATTA-TGAATC-AACATGA-TTTCTC-AAAACCT---TT--TGGTTTT-G-TTAATGT------T--AGTTTGACA-GATA-ATCCTCTGTGTAAA---CTAACTTT--TG-GAAGGCTTG-T-CAGACAA-TAT-ATC--ACATAGCTTA-GTCTGTCGTTTT-TTAATTTCTG-TGT-ACA-TCAAAGCAGCCTT-----------GGGTCACAG-AGG--AGTTTAGAGCCA--TCCG-TGTGGGT--AGATGAAGTGTCAAAA-T------------TGAC--ATATCTATGTATGCTCTGCA--TCAAT-GAC-AAAGCAGTCCAAGCGTA--TTACACA-GAGG----GATGTAT--CTTTC-AGC------T---GTATTATAAGAAT-ATTAAC-AAAACAAGAAG--TCAAATTGCAACTTTGTAAATTTG------GTATCTCGTATCTCTGTTTCTGGGTGTCTGTTTTGCCGGTTGCTCGTTTCTTCGTATTGCCTTTTACACACatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|10 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactgGGTGTGTGTAAAA-GGCAA-T-ACAAC-------AGAAAC-GAGACATC-ATGATACCGAGATA-CAGAGATTACGAGATAC--------CTAATCACAATAACA-------ATTA-GGTA--A-TCTAATCTGATTT-ATTAAATCAATTAGTA---C-TTG-CA-----ATTT--G-ACATT--TCAGGTCCAC-ATAACAA-TGAGCTAAA--T---TTCAACAAGTTT-GGTCGA---ACAA-TTTAATTCGAATTGCTTACAAGCGTGACC-----TA-ATG-A--TCATCTTGTAAATGACAGA-CATCATTTTTAGATACAAAAT------AT-GTGGATTTCA------------AAA-T-TC----TCAA--CACCAT--G-TG--TA-TCGGGAAA-TGCAAAGTTa
gi|11 : CA-GATACATCCTCTGC-----------------ATG--------TG-TA-----AA-CT--AACTAACATAGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGAA-TGGGGAGTTCGAGGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGC-GGT--AAACGAAGTGTCAAAA-TTGACATCTAATATGAC--A--------TATGCTCTGTACCTCAAT-GAC-AAAGCA-T---------ATTTACACAGGA-GATGTGATGTAT--CTTACAAACTACATGT-A-GTATTATA--AAT-ATCAACGAAAACAAGACG--TC-AATCGCCAC-TTGTAAAATT-----------------TCTCTATTTCT-GGTGTCT--T------GT--TTC
gi|12 : tgAC-GAGACACC-A-GATA-CAAGAAA-CAGAGA-TAC-----------------------AATGA-A---T-T-ATTG-TG-A--A-ACT-ATC-AATTT-ATTCAATC----GGTA---C-TTG-C------ATTT--G-ACATTA-TCAGCTCCAC-ATAA-AA-T-ACC-AAA--T---TCAAGCAAGTTT-AGT-GA---GCAA-TTTA-----AAGTGCTT-CAG-TATGATC----TTG-GT--------TTTG-----TG--AG--------------ATG-AAAA------AATGGCGG-AATC-------------ACATT-TAT---TCAT--CAACAT--CATG--TG-TGGGAATA-TGCAAAGTTGAC-T---------GGGT----AAGTA-TT
gi|13 : ATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TAGTTTA-G-TTAAAAT------T--AGTTTGACA-AATACATCCTCTGTG--------------T-ATG-GA--GCTTG-TACAAACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCCTCATGT-ACA-TCAAAGCAGAC-T-----------GGCTCACAG-AGAGCAGTTTAGAGCCAG-TCCGA
gi|14 : tAA-T------------TGAC--A--------TATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTA-TTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG-------------GTATCTCTGTTTCT-GGTGTCTCGT-------T--CT
gi|15 : AAA-CACAAGA-ACCGAA--TAACAGA-ATAATAA-AAAGTGT-GCTA-TG--------T-GTC-AATTTTATTCAATC----CGTA---C-TGG-TCAACCAATTT--G-ACATTATTCAGCTCCGG-ATAA-TA-T-AG--AAA--TATACTCGGCAGGTTT-GCT-GAGGTACAA-CTttg
gi|16 : GGGAAA-CCCAAAGTTTACA----------GAGT----CATTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTAT
gi|17 : TA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTTGG-TTGCT------------CTATgcctattacagtgtatatatagtattgaacatacatgt
gi|18 : GAGAAGCCAGA--T-CCAAT-ACAATAA-A---T-T-ATTA-TG-A--G-ACT-ATT-AATTT-AT--ATTT----GGTA---C-TTGAC------ATTT--GTACATTA-TGA-CTCCAC-ATAA-AGTT-AGC-AAA--gcctatattacagtgcatatatagtataatttttgtacgtacatgtaaattattttg
gi|19 : CC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACGAGA--TTCCAAT-AAAATCA-A---T-T-ATTA-T
gi|2 : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----A-TTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTG--AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--TA-TGGGGAAA-CCCAAAGTTTACAT--------ATAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTTA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--AATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTT--------A-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATCAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATA-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTT--G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCA-TTT-TTAATTCT---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------TATGCTCTGCATCTCAAT-GAC-AAAGCATTCC-AGGATAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|20 : GTGTGTGTAAAA-GGCAA-T-ACGA--------CGAAAC-GAGGCACC-A-GATA-CGAG
gi|21 : TCTATATAAA---CTAACTTT-GTG-GA--GCTTG-TACAGACA
gi|3 : aGGTGTGTGTAAAA-GGCAA-T-ACGATTACGAGAAGAAAC-GAGACACC-A-GATA-CGAGAAA-CAG-GA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGG-AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--CG-TGGGGAAA-CCCAAAGTTTA-AC--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCTCTATGCCTATTACTATTGTACGTACATGTAAATTA-TTTTGCACTTTTCAAAGTAAA-TGAAT----ACTGG-TGC--------TCATTTAA----A-----AAT--TTACTTTTCAAA-AAA-TAATATTT-ATATTTCT----TTTA-----AGCCAAT--AAT-TAA---T--TTTGAAATATATTTTCTT-TAATTTCTTACCT-TTGA------CAGCAT--GAAC---ATAAGA-CTTTTTGAAGATTTTTTTTTTCG-AAATTGCCCAAATTACTCAG-CATTA-----GCAATA--ATGCTGAAATTGAAAATTGTTAAACTATACAATATAA--ATATATAAAAATATATATAA-AGGGAGA-AATT-ATGAATC-AAAATGATTTTCTCAAAA-CCT---TT--TGG-TTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GCCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCATAG-AGAGC
gi|4 : GTGTGTAAAA-GGCAAAT-ACAA--------AGAAACAGATACACC-A-GATA-CGAGAAA-C-GAAA--AC------CCAGAAATACCAAT-ACAATAA-A---T-T-ATTA-TG-ACCA-GCT-ATC-AATTT-ATTAATTC----GGTA---CTTTGCC------ATTTTGA-ACATTA--GAGCTCCACAATAA-AA-T-AGC-AAGATT---TTCAGCAAATTTAAGT-GA---ACAA---TA-----AATTGCTT-CAA-CGTGACC----TTGAATGAACTTCATAATGTAAATAACAGATCAT---------AT
gi|4 : ACAAA-CAA---------ACA-AAAA--AACCAATGGTGGAATCC-------------ACAAT-TA----TCAA--TGACAT--C-TG--TGGTGGGGAAC-CCAAAAGTTTACA----------GAGT----CA-TA-TTTAATGGTAACCTTGGGTGGTTCGCTT-TCTCCAGGGTTTGCT------------TTttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|4 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaGTGC-T-CATTTAAA-AA-TTT---ACTTTTTAA---AAAAT-AAT----ATTTAATAT--------TTCTTTAA----GAAGCCAGTAATTAATTTTGAAATATATTTTTCTTT-A-A-TTCTTACCTTTGA---CAGCA-ATGAAACATAAGACT--TTTGAAGAATTTTTTTTT-CAA--CA-TGCCC-TAAATTAACTCAGTATTATAGCA-AATAATG-C----TGAA-A--TT-------GAAAATCT------TTA---AA-C--TATACATGTAATACTAT------ATT--------------TATATT----AT--ATATAT----AT-------A-A--GATA-TATAAAGGAATC-AACATGA-ATTTTCAAAA-CCT---TT--TGGTTTTGG-TTAATATTACGGGT--AGTTTGAccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|5 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactgA-AA-TTT---ACTTTATAA---AAA-T-AAT----ATT---------------TC-------------------ATTAATTTTGAAATATA-TTTTCATT-A-ATTTCTTACCTTTGA---CAGC--ATC-AACATAAGAGT--TTTGAAGAA-CTTTTTTT-CGA--CATTGCCA-TAAACT-ACTCATTAT--TAATTGAA-AATG-T----TTAA-ACTAT----------ACCTG-------TA---TA-T--TT-----GCTATAT-AT------ATTATA-----------TGCATA----AGCTATATAT----ATA------A-AGAGAGA-AATT-ATAAATC-AACATGA-TTTCTG-AAA-CCTTCCTT--TGGGTTT-acaaa
gi|5 : attgtacatgtgaattattttgcactttttgaatttgtaaattcA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTT-AGAGCCAG-TCCGATGT-GGT--TAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCATCTCAAT-GAC-AAAGCAGTCC-AGGAT-ATTTACACA-GG-G----AATGTAT--CTTTCAAAC------T-A-ATATTATA--AAT-ATCAACAAAAAAAAAAAGAATC-AATCGTCAC-TTGTAAAATTGGTACATGTATTTCATATCTCTGTTTCT-GGTGACTGGT------GT--CTCGTTACTTCGTATTGCCTTTTACACACtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|6 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAT--AAGC--A-TAATG-C----TAAA-ATTTT-------G-AAAATG------TT----------------------------------TCAAC-----------TATAT------------TAT----A--------A-AGTGAGAGAATTA-TAAATCCAACATGA-TTTCTC-AAA-CCT---TTGTTGTTTTT-GGTTGATAT------TCAAGTTTGAAA-GATACATCCTCTGCATAAAATACTAACTT--ATGTGA--GCTTGGTGCAGGTCA-TT------------GCTTA-GTCTGTCA-TTT-TTA-TTTC---TGT-ACAATCAAAGCAGCC-C-----------TCGTCACAGGAGAGCAGTTTAGAACCAGATCCGATGTTGGTTAAAATAAAATGTCAAAAAT------------TGAC--A--------CATGCTCTGCATCTCAATAAAC-AAAGCAGTCC-AGCAT-ATTTAC-CA-G--G----GATGTAA--CTTTCAAAC------TAA-GCGTTACAT-AAT-ATCAACAAAAACAAAAGG--TCAAATCGCCACTTTGTAAAATTG------GTATCTCGTA--TCTGTTTCT--CTATCTGGT------TT--CTC-TTTCTTCGTATTGCCTTTTACACACacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|7 : aaatgctgattagacagttgctcatgctggatttt-CCT---TT--TGGTTTT-G-TTAAAAT------T--AGTTTGGCA-GATATATCCTCTGTGTAAA---CTAACTTT-GTA-GA--ACTTG-TACAGACAA-TTTCAAA--ACATATCTTA-GTCTGTCT-TTC-TTAATCCC---TGT-ACA-TCAAA-------------------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTTTAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-AAC-AAAACAGTAC-AGCAT-ATTTACACA-GG-G----GATATAT--CTTTCAACC------T-A-GTATTATA--AAT-ATCAACAAGAACAAA--G--TC-AATCGCCAC-TTGTAAA-ATG------GTATCTTTTATCTCTGTTTCT-GGTGTCTG---------------GTTTCTTCGTATTGCCTTTTACACACa
gi|8 : GTTTGACATAATACA-CTTCCTTGTAAA---CTAACTTTTGTG-G---GCTTG-TACGGATAAATTTCAACT-GCATAAGTTAAGTCTGCTG-TCGGTTAAT-CC---TGTTAC--TTAAAGCAGAT-T-----------GGGTCACAG-AGGGGAATTTAGAGCCAG-T--GATTT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CGTGCTC-GCACAACATC-GACAAAAGCAAGTC-AGCGTAA--TACACA-GG-G----GATGTATAATTTTCAAAC------T-AGGTATTATC--AATAATCAACAAAAAGA----G--TC-AATCTCCAC-TTGTAAATTT--------------GTATCTCT--------GTGTCTGGT------GT--CTCG-TTCTTCGTATTG-CTTTTACCCACa
gi|9 : CTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TGCAGACAA-TTTCAAC--ACATGGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCAAAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGACATA--------TATGCTCTGCACCTCGAT-GAC-AAAGCAGTCC-AGCGT-ATTTACACA-GA-G----GATGTAT--CTTTCAAGC------G-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATC--------------CT-GGTATCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACACa
Alignments
lowQualScore : 1 33333333 1111 1111111 1 11111 22222222 111 111 222222 1111 2222222222 1 11 1 4444444444444 1 2222 1111 444444444444 1111 444444444444 222 111 222 1111 555555555555555555555555555555555555 1 1111 11 11 1 11 111 1 11 1111 88888888888888888888888888888888888888888888888888888888888888888888888888 222222222 3333333333333 11 1 111111 11 111 11111111111 1 222222222222 11111111 11 111111 11 111111111111111 1111111
lowQualScore : 6 3 6 00000000 5 5 5 5 5 5 2 4 1 0000 4 4 88888 4 4 0000000 5 5 0 0 22222 888 5 11111111 66 5 5 5 5 5 5 5 66 000 5 5 000 55 000000 6 6 4444 6 9999 3 5 8888888888 3 44 1 3333333333333 3 6 0000 99 0000 99 6 5 111111111111 4444 2 6 6 6 6 6 6 111111111111 111 8 8 444 6 555 8 8 7777 222222222222222222222222222222222222 0 0 6 8 8 0 0 7777 99 33 0 0 11 0 8 222 0 8 3 6 99 55 6 4444 6 1 88888888888888888888888888888888888888888888888888888888888888888888888888 333333333 2222222222222 6 1 2 6 22 5 5 1 5 888 66 0 55 5 666666 77 5 777 44 4 55 4 4 33 00 4 4 4 333 4 4 4 99999999999 4 4 0 66 4 222222222222 66 66666666 0 4 4 0 0 4 77 4 55 9999 66 222222 555 00 4 3 66 8 8 5 999999999999999 0 4 1 3333333 66
lowQualScore : . . . ........ . . . . . . . . . .... . . ..... . . ....... . . . . ..... ... . ........ .. . . . . . . . .. ... . . ... .. ...... . . .... . .... . . .......... . .. . ............. . . .... .. .... .. . . ............ .... . . . . . . . ............ ... . . ... . ... . . .... .................................... . . . . . . . .... .. .. . . .. . . ... . . . . .. .. . .... . . .......................................................................... ......... ............. . . . . .. . . . . ... .. . .. . ...... .. . ... .. . .. . . .. .. . . . ... . . . ........... . . . .. . ............ .. ........ . . . . . . .. . .. .... .. ...... ... .. . . .. . . . ............... . . . ....... ..
lowQualScore : 7 3 7 88888888 7 0 0 0 7 0 9 7 1 0000 4 4 77777 4 4 1111111 0 0 0 8 99999 888 0 44444444 99 0 0 0 0 0 0 0 99 000 7 7 000 99 222222 7 7 2222 7 8888 2 7 0000000000 3 55 3 3333333333333 3 7 8888 22 0000 22 7 7 333333333333 2222 5 7 7 7 7 7 7 000000000000 000 0 0 000 0 000 0 0 0000 888888888888888888888888888888888888 8 8 0 0 0 8 8 8888 00 00 8 0 00 8 0 000 8 0 8 0 22 88 7 2222 7 7 88888888888888888888888888888888888888888888888888888888888888888888888888 777777777 7777777777777 7 0 5 7 33 7 7 4 0 888 99 1 44 7 444444 99 0 000 44 0 55 0 4 00 66 4 4 4 999 4 0 0 00000000000 0 4 0 99 4 888888888888 11 11111111 9 4 4 1 1 4 33 4 99 4444 11 888888 333 66 4 9 11 9 9 1 666666666666666 1 4 1 9999999 11
consensus : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
Reference ( family-262 ) : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|1 : GGTGTGTGTAAAAAGGCAAATGACGA--------AGAAAC-GAGACACCGA-GATA-CGAGAAAACAGAGA-T-CGAGATACCAGA--TTCCAAT-ACA-TAA-A---T-TTATTAATG-A--AAGCT-ATC-AATTTCATTAATT-----GGTAAACT-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-A--T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAACTTTT-----AATTGCTT-CAA-CGTGACCTAAATTG-ATG-AACTTATCTGGT-AATGACAGA-CA----------ATATAAAATTAACCAATGGTGGAAATCATCGACTTCCTATACA-TATACGGTTCAAGCCGAC-TCAC-TGGTTG-TGGGGAAATCCCAAAG---ATATTGTCGCTAAGAGTGACGCAGTACTTTA-TG-T-ACTTGGGGTGATGA-CTTATCTCCTCGG-CT
gi|1 : GTGCCT-CATTTAAA-AAATTT---ACTTT-CAACT-AAA-T-AATTCTTATTAA-TATGAGGCTCTCTCTCTAATGTCG---CACATAA---AGTTTGAAATATAATTTTCTTTTA-ATTTCTTAACTTTGGTATCAGC--ATG-AACATAA-ACTGTTTTGAAGATTTTTTTTTTTCGA--AATTGCCCCTAAATTTACTCAGCAT--TAGC--AATAATGGC----TGAA-ATGT--------G-GAATTG------TTA---AAAC--TACAT--G-TATAC-AT------AT-AAA-----------TATATA----AA--ATAT-T----AT-------ACAGGGA----ATTA-TGAATC-AACATGA-TTTCTC-AAAACCT---TT--TGGTTTT-G-TTAATGT------T--AGTTTGACA-GATA-ATCCTCTGTGTAAA---CTAACTTT--TG-GAAGGCTTG-T-CAGACAA-TAT-ATC--ACATAGCTTA-GTCTGTCGTTTT-TTAATTTCTG-TGT-ACA-TCAAAGCAGCCTT-----------GGGTCACAG-AGG--AGTTTAGAGCCA--TCCG-TGTGGGT--AGATGAAGTGTCAAAA-T------------TGAC--ATATCTATGTATGCTCTGCA--TCAAT-GAC-AAAGCAGTCCAAGCGTA--TTACACA-GAGG----GATGTAT--CTTTC-AGC------T---GTATTATAAGAAT-ATTAAC-AAAACAAGAAG--TCAAATTGCAACTTTGTAAATTTG------GTATCTCGTATCTCTGTTTCTGGGTGTCTGTTTTGCCGGTTGCTCGTTTCTTCGTATTGCCTTTTACACACatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|10 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactgGGTGTGTGTAAAA-GGCAA-T-ACAAC-------AGAAAC-GAGACATC-ATGATACCGAGATA-CAGAGATTACGAGATAC--------CTAATCACAATAACA-------ATTA-GGTA--A-TCTAATCTGATTT-ATTAAATCAATTAGTA---C-TTG-CA-----ATTT--G-ACATT--TCAGGTCCAC-ATAACAA-TGAGCTAAA--T---TTCAACAAGTTT-GGTCGA---ACAA-TTTAATTCGAATTGCTTACAAGCGTGACC-----TA-ATG-A--TCATCTTGTAAATGACAGA-CATCATTTTTAGATACAAAAT------AT-GTGGATTTCA------------AAA-T-TC----TCAA--CACCAT--G-TG--TA-TCGGGAAA-TGCAAAGTTa
gi|11 : CA-GATACATCCTCTGC-----------------ATG--------TG-TA-----AA-CT--AACTAACATAGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGAA-TGGGGAGTTCGAGGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGC-GGT--AAACGAAGTGTCAAAA-TTGACATCTAATATGAC--A--------TATGCTCTGTACCTCAAT-GAC-AAAGCA-T---------ATTTACACAGGA-GATGTGATGTAT--CTTACAAACTACATGT-A-GTATTATA--AAT-ATCAACGAAAACAAGACG--TC-AATCGCCAC-TTGTAAAATT-----------------TCTCTATTTCT-GGTGTCT--T------GT--TTC
gi|12 : tgAC-GAGACACC-A-GATA-CAAGAAA-CAGAGA-TAC-----------------------AATGA-A---T-T-ATTG-TG-A--A-ACT-ATC-AATTT-ATTCAATC----GGTA---C-TTG-C------ATTT--G-ACATTA-TCAGCTCCAC-ATAA-AA-T-ACC-AAA--T---TCAAGCAAGTTT-AGT-GA---GCAA-TTTA-----AAGTGCTT-CAG-TATGATC----TTG-GT--------TTTG-----TG--AG--------------ATG-AAAA------AATGGCGG-AATC-------------ACATT-TAT---TCAT--CAACAT--CATG--TG-TGGGAATA-TGCAAAGTTGAC-T---------GGGT----AAGTA-TT
gi|13 : ATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TAGTTTA-G-TTAAAAT------T--AGTTTGACA-AATACATCCTCTGTG--------------T-ATG-GA--GCTTG-TACAAACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCCTCATGT-ACA-TCAAAGCAGAC-T-----------GGCTCACAG-AGAGCAGTTTAGAGCCAG-TCCGA
gi|14 : tAA-T------------TGAC--A--------TATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTA-TTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG-------------GTATCTCTGTTTCT-GGTGTCTCGT-------T--CT
gi|15 : AAA-CACAAGA-ACCGAA--TAACAGA-ATAATAA-AAAGTGT-GCTA-TG--------T-GTC-AATTTTATTCAATC----CGTA---C-TGG-TCAACCAATTT--G-ACATTATTCAGCTCCGG-ATAA-TA-T-AG--AAA--TATACTCGGCAGGTTT-GCT-GAGGTACAA-CTttg
gi|16 : GGGAAA-CCCAAAGTTTACA----------GAGT----CATTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTAT
gi|17 : TA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTTGG-TTGCT------------CTATgcctattacagtgtatatatagtattgaacatacatgt
gi|18 : GAGAAGCCAGA--T-CCAAT-ACAATAA-A---T-T-ATTA-TG-A--G-ACT-ATT-AATTT-AT--ATTT----GGTA---C-TTGAC------ATTT--GTACATTA-TGA-CTCCAC-ATAA-AGTT-AGC-AAA--gcctatattacagtgcatatatagtataatttttgtacgtacatgtaaattattttg
gi|19 : CC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACGAGA--TTCCAAT-AAAATCA-A---T-T-ATTA-T
gi|2 : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----A-TTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTG--AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--TA-TGGGGAAA-CCCAAAGTTTACAT--------ATAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTTA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--AATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTT--------A-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATCAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATA-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTT--G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCA-TTT-TTAATTCT---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------TATGCTCTGCATCTCAAT-GAC-AAAGCATTCC-AGGATAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|20 : GTGTGTGTAAAA-GGCAA-T-ACGA--------CGAAAC-GAGGCACC-A-GATA-CGAG
gi|21 : TCTATATAAA---CTAACTTT-GTG-GA--GCTTG-TACAGACA
gi|3 : aGGTGTGTGTAAAA-GGCAA-T-ACGATTACGAGAAGAAAC-GAGACACC-A-GATA-CGAGAAA-CAG-GA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGG-AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--CG-TGGGGAAA-CCCAAAGTTTA-AC--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCTCTATGCCTATTACTATTGTACGTACATGTAAATTA-TTTTGCACTTTTCAAAGTAAA-TGAAT----ACTGG-TGC--------TCATTTAA----A-----AAT--TTACTTTTCAAA-AAA-TAATATTT-ATATTTCT----TTTA-----AGCCAAT--AAT-TAA---T--TTTGAAATATATTTTCTT-TAATTTCTTACCT-TTGA------CAGCAT--GAAC---ATAAGA-CTTTTTGAAGATTTTTTTTTTCG-AAATTGCCCAAATTACTCAG-CATTA-----GCAATA--ATGCTGAAATTGAAAATTGTTAAACTATACAATATAA--ATATATAAAAATATATATAA-AGGGAGA-AATT-ATGAATC-AAAATGATTTTCTCAAAA-CCT---TT--TGG-TTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GCCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCATAG-AGAGC
gi|4 : GTGTGTAAAA-GGCAAAT-ACAA--------AGAAACAGATACACC-A-GATA-CGAGAAA-C-GAAA--AC------CCAGAAATACCAAT-ACAATAA-A---T-T-ATTA-TG-ACCA-GCT-ATC-AATTT-ATTAATTC----GGTA---CTTTGCC------ATTTTGA-ACATTA--GAGCTCCACAATAA-AA-T-AGC-AAGATT---TTCAGCAAATTTAAGT-GA---ACAA---TA-----AATTGCTT-CAA-CGTGACC----TTGAATGAACTTCATAATGTAAATAACAGATCAT---------AT
gi|4 : ACAAA-CAA---------ACA-AAAA--AACCAATGGTGGAATCC-------------ACAAT-TA----TCAA--TGACAT--C-TG--TGGTGGGGAAC-CCAAAAGTTTACA----------GAGT----CA-TA-TTTAATGGTAACCTTGGGTGGTTCGCTT-TCTCCAGGGTTTGCT------------TTttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|4 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaGTGC-T-CATTTAAA-AA-TTT---ACTTTTTAA---AAAAT-AAT----ATTTAATAT--------TTCTTTAA----GAAGCCAGTAATTAATTTTGAAATATATTTTTCTTT-A-A-TTCTTACCTTTGA---CAGCA-ATGAAACATAAGACT--TTTGAAGAATTTTTTTTT-CAA--CA-TGCCC-TAAATTAACTCAGTATTATAGCA-AATAATG-C----TGAA-A--TT-------GAAAATCT------TTA---AA-C--TATACATGTAATACTAT------ATT--------------TATATT----AT--ATATAT----AT-------A-A--GATA-TATAAAGGAATC-AACATGA-ATTTTCAAAA-CCT---TT--TGGTTTTGG-TTAATATTACGGGT--AGTTTGAccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|5 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactgA-AA-TTT---ACTTTATAA---AAA-T-AAT----ATT---------------TC-------------------ATTAATTTTGAAATATA-TTTTCATT-A-ATTTCTTACCTTTGA---CAGC--ATC-AACATAAGAGT--TTTGAAGAA-CTTTTTTT-CGA--CATTGCCA-TAAACT-ACTCATTAT--TAATTGAA-AATG-T----TTAA-ACTAT----------ACCTG-------TA---TA-T--TT-----GCTATAT-AT------ATTATA-----------TGCATA----AGCTATATAT----ATA------A-AGAGAGA-AATT-ATAAATC-AACATGA-TTTCTG-AAA-CCTTCCTT--TGGGTTT-acaaa
gi|5 : attgtacatgtgaattattttgcactttttgaatttgtaaattcA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTT-AGAGCCAG-TCCGATGT-GGT--TAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCATCTCAAT-GAC-AAAGCAGTCC-AGGAT-ATTTACACA-GG-G----AATGTAT--CTTTCAAAC------T-A-ATATTATA--AAT-ATCAACAAAAAAAAAAAGAATC-AATCGTCAC-TTGTAAAATTGGTACATGTATTTCATATCTCTGTTTCT-GGTGACTGGT------GT--CTCGTTACTTCGTATTGCCTTTTACACACtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|6 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAT--AAGC--A-TAATG-C----TAAA-ATTTT-------G-AAAATG------TT----------------------------------TCAAC-----------TATAT------------TAT----A--------A-AGTGAGAGAATTA-TAAATCCAACATGA-TTTCTC-AAA-CCT---TTGTTGTTTTT-GGTTGATAT------TCAAGTTTGAAA-GATACATCCTCTGCATAAAATACTAACTT--ATGTGA--GCTTGGTGCAGGTCA-TT------------GCTTA-GTCTGTCA-TTT-TTA-TTTC---TGT-ACAATCAAAGCAGCC-C-----------TCGTCACAGGAGAGCAGTTTAGAACCAGATCCGATGTTGGTTAAAATAAAATGTCAAAAAT------------TGAC--A--------CATGCTCTGCATCTCAATAAAC-AAAGCAGTCC-AGCAT-ATTTAC-CA-G--G----GATGTAA--CTTTCAAAC------TAA-GCGTTACAT-AAT-ATCAACAAAAACAAAAGG--TCAAATCGCCACTTTGTAAAATTG------GTATCTCGTA--TCTGTTTCT--CTATCTGGT------TT--CTC-TTTCTTCGTATTGCCTTTTACACACacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|7 : aaatgctgattagacagttgctcatgctggatttt-CCT---TT--TGGTTTT-G-TTAAAAT------T--AGTTTGGCA-GATATATCCTCTGTGTAAA---CTAACTTT-GTA-GA--ACTTG-TACAGACAA-TTTCAAA--ACATATCTTA-GTCTGTCT-TTC-TTAATCCC---TGT-ACA-TCAAA-------------------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTTTAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-AAC-AAAACAGTAC-AGCAT-ATTTACACA-GG-G----GATATAT--CTTTCAACC------T-A-GTATTATA--AAT-ATCAACAAGAACAAA--G--TC-AATCGCCAC-TTGTAAA-ATG------GTATCTTTTATCTCTGTTTCT-GGTGTCTG---------------GTTTCTTCGTATTGCCTTTTACACACa
gi|8 : GTTTGACATAATACA-CTTCCTTGTAAA---CTAACTTTTGTG-G---GCTTG-TACGGATAAATTTCAACT-GCATAAGTTAAGTCTGCTG-TCGGTTAAT-CC---TGTTAC--TTAAAGCAGAT-T-----------GGGTCACAG-AGGGGAATTTAGAGCCAG-T--GATTT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CGTGCTC-GCACAACATC-GACAAAAGCAAGTC-AGCGTAA--TACACA-GG-G----GATGTATAATTTTCAAAC------T-AGGTATTATC--AATAATCAACAAAAAGA----G--TC-AATCTCCAC-TTGTAAATTT--------------GTATCTCT--------GTGTCTGGT------GT--CTCG-TTCTTCGTATTG-CTTTTACCCACa
gi|9 : CTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TGCAGACAA-TTTCAAC--ACATGGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCAAAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGACATA--------TATGCTCTGCACCTCGAT-GAC-AAAGCAGTCC-AGCGT-ATTTACACA-GA-G----GATGTAT--CTTTCAAGC------G-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATC--------------CT-GGTATCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACACa
blockSeqs : . A . TTACGAGA A . T C . T G T C AATA C C AAGTG . . ACCAG A T T CAATT . T TCAACCA TG T T A C T G T AT ATA A C GGT T AATTCG A G . A AACT A T TCATTTTTAG C TT A A T . T . CA . G . CATA . G . A G G . T CTATGCCTATTA GTA T . TGC T AGT A G . TAATATTTCTTTAAGAAGCCAGTA T . T A CA GA G . . TTT . T A TA TG . TTTT G T TTTTTTTCGAAATTGCCCAAATTACTCAGCATTAGCAATAATGCTGAAATTGAAAATTGTTAAAC AATATAA AAAAATATATATA . G G G AA C T A . TCC GT TG G TACGGG CA T ATA TG T . G A TC TA A . G TCA T A . GGGGAGTTCGA G A T TA A TGACATCTAATA AT . A A . AA G A ATGT AA TACATG AA T A C AA A T A GGTACATGTATTTCA . G G .
blockSeqs : . . . C . . . . . . A A C TA . . T . . TAAT . . . C . . CA . . . . . . . . . . . . . T A . . . . ACT A . T . TT A . A . . . G . . . ACA . T . . . . . . . T . . . T . . . . TATATTTCTTTAAGCCAATA . . . A A G G . . A . T . . A . . . T TGAAAATCTTTAAACTATACATGTAATACTATATT AAGCT ATA . G G . AA . . A . . . A . . . . . A . . . . TC T . . . . . . . . . . . . . . . . . . . AA . A . . . AG . . C . . . T GGTATCTCG . G G .
blockSeqs : . . . . . . . . . . G T G TT . . T . . AAA . . . C . . AC . . . . . . . . . . . . . C A . . . . ACT A . T . T . . . . . . C . . . CT . G . . . . . . . T . . . T . . . . GGTGCTCATTTAAAAAT . . . A . C G . . C . C . . . . . . C AAAATTGTTAAACTAGCTATACATATCAAA AAA AT . A T . A . . . . . . T . . . . . A . . . . TC . . . . . . . . . . . . . . . . . . . . A . A . . . A . . C . . . T GGTATCTCG . G G .
blockSeqs : . . . . . . . . . . G T C TT . . T . . AGA . . . T . . CC . . . . . . . . . . . . . T A . . . . A A . T . . . . . . . . C . . . CA . G . . . . . . . . . . A . . . . TC . . . . . . . . . C . . . . . . . . T TACCTGTATATTTGCTATATATATTATA TAT AT . T G . A . . . . . . T . . . . . A . . . . TC . . . . . . . . . . . . . . . . . . . . A . G . . . A . . A . . . A GGTATCTTT . G T .
blockSeqs : . . . . . . . . . . G T C TT . . T . . AAG . . . T . . C . . . . . . . . . . . . . T . . . . . . . . A . . . . . . . . C . . . CA . . . . . . . . . . . . . . TGAAAATGTTTCAAC . A . . G . A . . . . . . T . . . . . G . . . . TC . . . . . . . . . . . . . . . . . . . . A . G . . . A . . G . . . A GGTATC . G G .
blockSeqs : . . . . . . G . C T . . T . . AAG . . . T . . C . . . . . . . . . . . . . . . . . . . . . . . T . . . . . A . . . . TC . . . . . . . . . . . . . . . . . . . . A . G . . . A . . C . . . T GG . G G .
blockSeqs : . . . . . . . . . . T . . . . . . C . . C . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . A . A . . . A . . . . . . T G . . . .
blockSeqs : . . . . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . A . . . . . A . . . . . . . . . . . .
blockSeqs : . A . . . . . . .
blockSeqCons : AAG**** C**** *** T* **** T********* ************* **** ** C*** ** CA********** **** *** **** TGTGCTCTTTAAGCAGT******************* A*** ** A* ** TC *** ******** G* A** ** G****** **
originalCons : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--TG-TGGGGAAA-CCCAAAGTTTACAT--------AGAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTNA-TAT--------TTCTTTAA----G---CCAATAATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GA-G----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
finalCons : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TGAAG----CT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAAT-TTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACATC---TG--TG-TGGGGAAA-CCCAAAGTTTACA----------GAGT----CAGTA-TTTA-TG-TAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATTTGTGCTCTTTAAGCAGT-------------------ATTAATTTTGAAATATA-TTTTCTTT-A-ATTTCTTACCTTTGA---CAGC--ATG-AACATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTTA-TG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACA-GG-G----GATGTAT--CTTTCAAGC------TA--GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGTG------T--CTCGTTTCTTCGTATTGCCTTTTACACAC
Alignments
lowQualScore : 1111111111111111111111111111111111111111
lowQualScore : 1 33333333 1111 1111111 1 11111 22222222 111 111 222222 1111 2222222222 1 11 1 4444444444444 1 2222 1111 111 1111111 1111 444444444444 222 111 222 1111 1111111111111111111111111111111111111111 1111 11 1 11 111 1 11 1111 88888888888888888888888888888888888888888888888888888888888888888888888888 222222222 3333333333333 11 1 111111 11 111 11111111111 1 222222222222 11111111 11 11111 111111 11 111111111111111 1111111
lowQualScore : 6 3 6 00000000 5 5 5 5 5 5 2 4 1 0000 4 4 88888 4 4 0000000 5 5 0 0 22222 888 5 11111111 66 5 5 5 5 5 5 5 66 000 5 5 000 55 000000 6 6 4444 6 9999 3 5 8888888888 3 44 1 3333333333333 3 6 0000 99 0000 9999 5 000 6666666 99 4444 2 6 6 6 6 6 6 111111111111 111 8 8 444 6 555 8 8 7777 2222222222222222222222222222222222222222 0 8 8 8 8 0 0 7777 11 8 5 8 0 0 11 0 8 222 0 8 3 6 99 55 6 4444 6 1 88888888888888888888888888888888888888888888888888888888888888888888888888 333333333 2222222222222 6 1 2 6 22 5 5 1 5 888 66 0 55 5 666666 77 5 777 44 4 55 4 4 33 00 4 4 4 333 4 4 4 99999999999 4 4 0 66 4 222222222222 66 66666666 0 4 4 0 0 4 77 4 11111 66 222222 555 00 4 3 66 8 8 5 999999999999999 0 4 1 3333333 66
lowQualScore : . . . ........ . . . . . . . . . .... . . ..... . . ....... . . . . ..... ... . ........ .. . . . . . . . .. ... . . ... .. ...... . . .... . .... . . .......... . .. . ............. . . .... .. .... .... . ... ....... .. .... . . . . . . . ............ ... . . ... . ... . . .... ........................................ . . . . . . . .... .. . . . . . .. . . ... . . . . .. .. . .... . . .......................................................................... ......... ............. . . . . .. . . . . ... .. . .. . ...... .. . ... .. . .. . . .. .. . . . ... . . . ........... . . . .. . ............ .. ........ . . . . . . .. . ..... .. ...... ... .. . . .. . . . ............... . . . ....... ..
lowQualScore : 7 3 7 88888888 7 0 0 0 7 0 9 7 1 0000 4 4 77777 4 4 1111111 0 0 0 8 99999 888 0 44444444 99 0 0 0 0 0 0 0 99 000 7 7 000 99 222222 7 7 2222 7 8888 2 7 0000000000 3 55 3 3333333333333 3 7 8888 22 0000 3333 7 000 0000000 22 2222 5 7 7 7 7 7 7 000000000000 000 0 0 000 0 000 0 0 0000 0000000000000000000000000000000000000000 8 0 0 0 0 8 8 8888 00 0 0 0 8 0 00 8 0 000 8 0 8 0 22 88 7 2222 7 7 88888888888888888888888888888888888888888888888888888888888888888888888888 777777777 7777777777777 7 0 5 7 33 7 7 4 0 888 99 1 44 7 444444 99 0 000 44 0 55 0 4 00 66 4 4 4 999 4 0 0 00000000000 0 4 0 99 4 888888888888 11 11111111 9 4 4 1 1 4 33 4 11111 11 888888 333 66 4 9 11 9 9 1 666666666666666 1 4 1 9999999 11
consensus : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--T-GTGGGGAAA-CCCAAAG---TT-----T-ACAGA--GT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATT--TA-TG-------CTTC-TTTAA----G----C-AATAATTAATTTTGAAATATA-TTTT-CTTT-A-ATTTCTTACCTTTGA---CAGC--A-TGAA-CATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACAG-GG-----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
Reference ( family-262 ) : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTC----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGGAAATC-------------ACA-T-TA----TCAA--CGACAT--C-TG--T-GTGGGGAAA-CCCAAAG---TT-----T-ACAGA--GT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATT--TG-TG-------CT-C-TTTAA----G----C-AGTA-TTAATTTTGAAATATA-TTTT-CTTT-A-ATTTCTTACCTTTGA---CAGC--A-TGAA-CATAAGACT--TTTGAAGAATTTTTTTTT-CGA--NATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTTT-------G-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATTAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTAATTTACACAG-GG-----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|1 : GGTGTGTGTAAAAAGGCAAATGACGA--------AGAAAC-GAGACACCGA-GATA-CGAGAAAACAGAGA-T-CGAGATACCAGA--TTCCAAT-ACA-TAA-A---T-TTATTAATG-A--AAGCT-ATC-AATTTCATTAATT-----GGTAAACT-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-A--T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAACTTTT-----AATTGCTT-CAA-CGTGACCTAAATTG-ATG-AACTTATCTGGT-AATGACAGA-CA----------ATATAAAATTAACCAATGGTGGAAATCATCGACTTCCTATACA-TATACGGTTCAAGCCGAC-TCAC-TGGTT-GTGGGGAAATCCCAAAGATATTGTCGCT-A-AGA--GTGACGCAGTACTTT-AT-GT-ACTTGGGGTGATGA-CTTATCTCCTCGG-CT
gi|1 : GTGCCT-CATTTAAA-AAATTT---ACTTT-CAACT-AAA-T-AATTCTTATTAATA-TGAGGCTCTCT-C-TCTAATGTCG----C-A-CA-TAAAGTTTGAAATATAATTTT-CTTTTA-ATTTCTTAACTTTGGTATCAGC--A-TGAA-CATAA-ACTGTTTTGAAGATTTTTTTTTTTCGA--AATTGCCCCTAAATTTACTCAGCAT--TAGC--AATAATGGC----TGAA-ATGT--------G-GAATTG------TTA---AAAC--TACAT--G-TATAC-AT------AT-AAA-----------TATATA----AA--ATAT-T----AT-------ACAGGGA----ATTA-TGAATC-AACATGA-TTTCTC-AAAACCT---TT--TGGTTTT-G-TTAATGT------T--AGTTTGACA-GATA-ATCCTCTGTGTAAA---CTAACTTT--TG-GAAGGCTTG-T-CAGACAA-TAT-ATC--ACATAGCTTA-GTCTGTCGTTTT-TTAATTTCTG-TGT-ACA-TCAAAGCAGCCTT-----------GGGTCACAG-AGG--AGTTTAGAGCCA--TCCG-TGTGGGT--AGATGAAGTGTCAAAA-T------------TGAC--ATATCTATGTATGCTCTGCA--TCAAT-GAC-AAAGCAGTCCAAGCGTA--TTACACAGAGG-----GATGTAT--CTTTC-AGC------T---GTATTATAAGAAT-ATTAAC-AAAACAAGAAG--TCAAATTGCAACTTTGTAAATTTG------GTATCTCGTATCTCTGTTTCTGGGTGTCTGTTTTGCCGGTTGCTCGTTTCTTCGTATTGCCTTTTACACACatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactggtgcctcatttaaaaaatttactttcaactaaataattcttattaatatgaggctctctctctaatgtcgcacataaagtttgaaatataattttcttttaatttcttaactttggtatcagcatgaacataaactgttttgaagatttttttttttcgaaattgcccctaaatttactcagcattagcaataatggctgaaatgtggaattgttaaaactacatgtatacatataaatatataaaatattatacagggaattatgaatcaacatgatttctcaaaaccttttggttttgttaatgttagtttgacagataatcctctgtgtaaactaacttttggaaggcttgtcagacaatatatcacatagcttagtctgtcgttttttaatttctgtgtacatcaaagcagccttgggtcacagaggagtttagagccatccgtgtgggtagatgaagtgtcaaaattgacatatctatgtatgctctgcatcaatgacaaagcagtccaagcgtattacacagagggatgtatctttcagctgtattataagaatattaacaaaacaagaagtcaaattgcaactttgtaaatttggtatctcgtatctctgtttctgggtgtctgttttgccggttgctcgtttcttcgtattgccttttacacaca
gi|10 : ggtgtgtgtaaaaaggcaaatgacgaagaaacgagacaccgagatacgagaaaacagagatcgagataccagattccaatacataaatttattaatgaaagctatcaatttcattaattggtaaactttgcatttgacattatgagctccacataaatagcaaatttcagcaagtttagtgaacaacttttaattgcttcaacgtgacctaaattgatgaacttatctggtaatgacagacaatataaaattaaccaatggtggaaatcatcgacttcctatacatatacggttcaagccgactcactggttgtggggaaatcccaaagatattgtcgctaagagtgacgcagtactttatgtacttggggtgatgacttatctcctcggctatgatactatccgagcctattacattgtagacgtcgcgggtttgggtacatgttaaattaggtgttcagcatctcacttttcaaagtaatgaatactgGGTGTGTGTAAAA-GGCAA-T-ACAAC-------AGAAAC-GAGACATC-ATGATACCGAGATA-CAGAGATTACGAGATAC--------CTAATCACAATAACA-------ATTA-GGTA--A-TCTAATCTGATTT-ATTAAATCAATTAGTA---C-TTG-CA-----ATTT--G-ACATT--TCAGGTCCAC-ATAACAA-TGAGCTAAA--T---TTCAACAAGTTT-GGTCGA---ACAA-TTTAATTCGAATTGCTTACAAGCGTGACC-----TA-ATG-A--TCATCTTGTAAATGACAGA-CATCATTTTTAGATACAAAAT------AT-GTGGATTTCA------------AAA-T-TC----TCAA--CACCAT--G-TG--T-ATCGGGAAA-TGCAAAG---TT-----a
gi|11 : CA-GATACATCCTCTGC-----------------ATG--------TG-TA-----AA-CT--AACTAACATAGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGAA-TGGGGAGTTCGAGGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGC-GGT--AAACGAAGTGTCAAAA-TTGACATCTAATATGAC--A--------TATGCTCTGTACCTCAAT-GAC-AAAGCA-T---------ATTTACACAG-GAGATGTGATGTAT--CTTACAAACTACATGT-A-GTATTATA--AAT-ATCAACGAAAACAAGACG--TC-AATCGCCAC-TTGTAAAATT-----------------TCTCTATTTCT-GGTGTCT--T------GT--TTC
gi|12 : tgAC-GAGACACC-A-GATA-CAAGAAA-CAGAGA-TAC-----------------------AATGA-A---T-T-ATTG-TG-A--A-ACT-ATC-AATTT-ATTCAATC----GGTA---C-TTG-C------ATTT--G-ACATTA-TCAGCTCCAC-ATAA-AA-T-ACC-AAA--T---TCAAGCAAGTTT-AGT-GA---GCAA-TTTA-----AAGTGCTT-CAG-TATGATC----TTG-GT--------TTTG-----TG--AG--------------ATG-AAAA------AATGGCGG-AATC-------------ACATT-TAT---TCAT--CAACAT--CATG--T-GTGGGAATA-TGCAAAG---TT-----G-ACTGG--GT----AAGTA-TT
gi|13 : ATGAATC-AACATGA-TTTCTC-AAA-CCT---TT--TAGTTTA-G-TTAAAAT------T--AGTTTGACA-AATACATCCTCTGTG--------------T-ATG-GA--GCTTG-TACAAACAA-TTTCAAC--ACATAGCTTA-GTCTGTCG-TTT-TTAATTCCTCATGT-ACA-TCAAAGCAGAC-T-----------GGCTCACAG-AGAGCAGTTTAGAGCCAG-TCCGA
gi|14 : tAA-T------------TGAC--A--------TATGCTCTGCACCTCAAT-GAC-AAAGCAGTCC-AGCGTA-TTTACACAG-AG-----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG-------------GTATCTCTGTTTCT-GGTGTCTCGT-------T--CT
gi|15 : AAA-CACAAGA-ACCGAA--TAACAGA-ATAATAA-AAAGTGT-GCTA-TG--------T-GTC-AATTTTATTCAATC----CGTA---C-TGG-TCAACCAATTT--G-ACATTATTCAGCTCCGG-ATAA-TA-T-AG--AAA--TATACTCGGCAGGTTT-GCT-GAGGTACAA-CTttg
gi|16 : GGGAAA-CCCAAAG---TT-----T-ACAGA--GT----CATTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTAT
gi|17 : T-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTTGG-TTGCT------------CTATgcctattacagtgtatatatagtattgaacatacatgt
gi|18 : GAGAAGCCAGA--T-CCAAT-ACAATAA-A---T-T-ATTA-TG-A--G-ACT-ATT-AATTT-AT--ATTT----GGTA---C-TTGAC------ATTT--GTACATTA-TGA-CTCCAC-ATAA-AGTT-AGC-AAA--gcctatattacagtgcatatatagtataatttttgtacgtacatgtaaattattttg
gi|19 : CC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACGAGA--TTCCAAT-AAAATCA-A---T-T-ATTA-T
gi|2 : GGTGTGTGTAAAA-GGCAA-T-ACGA--------AGAAAC-GAGACACC-A-GATA-CGAGAAA-CAGAGA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTTA-----A-TTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTG--AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--T-ATGGGGAAA-CCCAAAG---TT-----T-ACATATAGT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCT------------CTATTGTGC-T-CATTTAAA-AA-TTT---ACTTTTCAA---AAA-T-AAT----ATT--TA-TA-------TTTC-TTTAA----G----CCAATAATTAATTTTGAAATATA-TTTT-CTTT-A-ATTTCTTACCTTTGA---CAGC--A-TGAA-CATAAGACT--TTTGAAGAATTTTTTTTT-CGA--AATTGCCC-TAAATT-ACTCAGCAT--TAGC--AATAATG-C----TGAA-ATTT--------A-AAATTG------TTA---AA-C--TA-----GCTATAC-AT------ATCAAA-----------TATATA----AA--ATATAT----AT-------A-AGGGAGA-AATTAATGAATA-AACATGA-TTTCTC-AAA-CCT---TT--TGGTTT--G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GTCTGTCA-TTT-TTAATTCT---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------TATGCTCTGCATCTCAAT-GAC-AAAGCATTCC-AGGATAATTTACACAG-AG-----GATGTAT--CTTTCAAGC------T-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATCTCGTATCTCTGTTTCT-GGTGTCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACAC
gi|20 : GTGTGTGTAAAA-GGCAA-T-ACGA--------CGAAAC-GAGGCACC-A-GATA-CGAG
gi|21 : TCTATATAAA---CTAACTTT-GTG-GA--GCTTG-TACAGACA
gi|3 : aGGTGTGTGTAAAA-GGCAA-T-ACGATTACGAGAAGAAAC-GAGACACC-A-GATA-CGAGAAA-CAG-GA-TACGAGATACCAGA--TTCCAAT-ACAATAA-A---T-T-ATTA-TG-A--A-GCT-ATC-AATTT-ATTAATTT----GGTA---C-TTG-C------ATTT--G-ACATTA-TGAGCTCCAC-ATAA-AA-T-AGC-AAA--T---TTCAGCAAGTTT-AGT-GA---ACAA-TTT------AATTGCTT-CAA-CGTGACC----TTG-ATG-ACTTCATCTGGTAAATGACAGA-CAT---------ATA-AAAATTAACCAATGGTGG-AATC-------------ACA-T-TA----TCAA--TGACAT--C-TG--C-GTGGGGAAA-CCCAAAG---TT-----TAACAGA--GT----CAGTA-TTT-AT-GTAACCTTGGGTGGTGC-CTT-TCTCCTCGG-TTGCTCTATGCCTATTACTATTGTACGTACATGTAAATTA-TTTTGCACTTTTCAAAGTAAA-TGAAT----ACT--GG-TG-------CT-CATTTAA----A------AAT--TTACTTTTCAAA-AAA-TAAT-ATTT-ATATTTCT----TTTA-----AGCCAA-T-AA-T-TAA---T--TTTGAAATATATTTTCTT-TAATTTCTTACCT-TTGA------CAGCAT--GAAC---ATAAGA-CTTTTTGAAGATTTTTTTTTTCG-AAATTGCCCAAATTACTCAG-CATTA-----GCAATA--ATGCTGAAATTGAAAATTGTTAAACTATACAATATAA--ATATATAAAAATATATATAA-AGGGAGA-AATT-ATGAATC-AAAATGATTTTCTCAAAA-CCT---TT--TGG-TTT-G-TTAATAT------T--AGTTTGACA-GATACATCCTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TACAGACAA-TTTCAAC--ACATAGCTTA-GCCTGTCG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCATAG-AGAGC
gi|4 : GTGTGTAAAA-GGCAAAT-ACAA--------AGAAACAGATACACC-A-GATA-CGAGAAA-C-GAAA--AC------CCAGAAATACCAAT-ACAATAA-A---T-T-ATTA-TG-ACCA-GCT-ATC-AATTT-ATTAATTC----GGTA---CTTTGCC------ATTTTGA-ACATTA--GAGCTCCACAATAA-AA-T-AGC-AAGATT---TTCAGCAAATTTAAGT-GA---ACAA---TA-----AATTGCTT-CAA-CGTGACC----TTGAATGAACTTCATAATGTAAATAACAGATCAT---------AT
gi|4 : ACAAA-CAA---------ACA-AAAA--AACCAATGGTGGAATCC-------------ACAAT-TA----TCAA--TGACAT--C-TG--TGGTGGGGAAC-CCAAAAG---TT-----T-ACAGA--GT----CA-TA-TTTAATGGTAACCTTGGGTGGTTCGCTT-TCTCCAGGGTTTGCT------------TTttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|4 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaGTGC-T-CATTTAAA-AA-TTT---ACTTTTTAA---AAAAT-AAT----ATT--TAATA-------TTTC-TTTAA----GAAGCC-AGTAATTAATTTTGAAATATA-TTTTTCTTT-A-ATT-CTTACCTTTGA---CAGC--AATGAAACATAAGACT--TTTGAAGAATTTTTTTTT-CAA--CA-TGCCC-TAAATTAACTCAGTATTATAGCA-AATAATG-C----TGAA-A--TT-------GAAAATCT------TTA---AA-C--TATACATGTAATACTAT------ATT--------------TATATT----AT--ATATAT----AT-------A-A--GATA-TATAAAGGAATC-AACATGA-ATTTTCAAAA-CCT---TT--TGGTTTTGG-TTAATATTACGGGT--AGTTTGAccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactggtgctcatttaaaaatttactttttaaaaaataatatttaatatttctttaagaagccagtaattaattttgaaatatatttttctttaattcttacctttgacagcaatgaaacataagacttttgaagaatttttttttcaacatgccctaaattaactcagtattatagcaaataatgctgaaattgaaaatctttaaactatacatgtaatactatatttatattatatatatataagatatataaaggaatcaacatgaattttcaaaaccttttggttttggttaatattacgggtagtttgaacaaa
gi|5 : gtgtgtaaaaggcaaatacaaagaaacagatacaccagatacgagaaacgaaaacccagaaataccaatacaataaattattatgaccagctatcaatttattaattcggtactttgccattttgaacattagagctccacaataaaatagcaagattttcagcaaatttaagtgaacaataaattgcttcaacgtgaccttgaatgaacttcataatgtaaataacagatcatatttttgatgaaaaaaaaaacaccaaacaaacaaacaaacaaaaaaaccaatggtggaatccacaattatcaatgacatctgtggtggggaacccaaaagtttacagagtcatatttaatggtaaccttgggtggttcgctttctccagggtttgctttccttcagtgacataatagcctatataaaaaggcattactaattacagtgtatttagtattatacgtacatgtaaattattttgcacttttcaaaatttgtaaatgaaactgA-AA-TTT---ACTTTATAA---AAA-T-AAT----ATT--T----------------------------------CA-TTAATTTTGAAATATA-TTTT-CATT-A-ATTTCTTACCTTTGA---CAGC--A-TCAA-CATAAGAGT--TTTGAAGAA-CTTTTTTT-CGA--CATTGCCA-TAAACT-ACTCATTAT--TAATTGAA-AATG-T----TTAA-ACTAT----------ACCTG-------TA---TA-T--TT-----GCTATAT-AT------ATTATA-----------TGCATA----AGCTATATAT----ATA------A-AGAGAGA-AATT-ATAAATC-AACATGA-TTTCTG-AAA-CCTTCCTT--TGGGTTT-acaaa
gi|5 : attgtacatgtgaattattttgcactttttgaatttgtaaattcA-TCAAAGCAGCC-T-----------GGGTCACAG-AGAGCAGTT-AGAGCCAG-TCCGATGT-GGT--TAATGAAGTGTCAAAA-T------------TGAC--A--------CATGCTCTGCATCTCAAT-GAC-AAAGCAGTCC-AGGAT-ATTTACACAG-GG-----AATGTAT--CTTTCAAAC------T-A-ATATTATA--AAT-ATCAACAAAAAAAAAAAGAATC-AATCGTCAC-TTGTAAAATTGGTACATGTATTTCATATCTCTGTTTCT-GGTGACTGGT------GT--CTCGTTACTTCGTATTGCCTTTTACACACtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaagcagcctgggtcacagagagcagttagagccagtccgatgtggttaatgaagtgtcaaaattgacacatgctctgcatctcaatgacaaagcagtccaggatatttacacagggaatgtatctttcaaactaatattataaatatcaacaaaaaaaaaaagaatcaatcgtcacttgtaaaattggtacatgtatttcatatctctgtttctggtgactggtgtctcgttacttcgtattgccttttacacacacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|6 : attgtacatgtgaattattttgcactttttgaatttgtaaattcaaatttactttataaaaataatatttcattaattttgaaatatattttcattaatttcttacctttgacagcatcaacataagagttttgaagaactttttttcgacattgccataaactactcattattaattgaaaatgtttaaactatacctgtatatttgctatatatattatatgcataagctatatatataaagagagaaattataaatcaacatgatttctgaaaccttcctttgggttttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCAT--AAGC--A-TAATG-C----TAAA-ATTTT-------G-AAAATG------TT----------------------------------TCAAC-----------TATAT------------TAT----A--------A-AGTGAGAGAATTA-TAAATCCAACATGA-TTTCTC-AAA-CCT---TTGTTGTTTTT-GGTTGATAT------TCAAGTTTGAAA-GATACATCCTCTGCATAAAATACTAACTT--ATGTGA--GCTTGGTGCAGGTCA-TT------------GCTTA-GTCTGTCA-TTT-TTA-TTTC---TGT-ACAATCAAAGCAGCC-C-----------TCGTCACAGGAGAGCAGTTTAGAACCAGATCCGATGTTGGTTAAAATAAAATGTCAAAAAT------------TGAC--A--------CATGCTCTGCATCTCAATAAAC-AAAGCAGTCC-AGCAT-ATTTAC-CA--GG-----GATGTAA--CTTTCAAAC------TAA-GCGTTACAT-AAT-ATCAACAAAAACAAAAGG--TCAAATCGCCACTTTGTAAAATTG------GTATCTCGTA--TCTGTTTCT--CTATCTGGT------TT--CTC-TTTCTTCGTATTGCCTTTTACACACacccagtagataagagctttgtgtgagtgagctatccctaatcttcagaaattcccaatacatattgatttcgcctatcaattgcgtccgtatcaaaacatgtaagcaacaaaagcacctgaatagccgtttcggt
gi|7 : aaatgctgattagacagttgctcatgctggatttt-CCT---TT--TGGTTTT-G-TTAAAAT------T--AGTTTGGCA-GATATATCCTCTGTGTAAA---CTAACTTT-GTA-GA--ACTTG-TACAGACAA-TTTCAAA--ACATATCTTA-GTCTGTCT-TTC-TTAATCCC---TGT-ACA-TCAAA-------------------GGGTCACAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTTTAAA-T------------TGAC--A--------CATGCTCTGCACCTCAAT-AAC-AAAACAGTAC-AGCAT-ATTTACACAG-GG-----GATATAT--CTTTCAACC------T-A-GTATTATA--AAT-ATCAACAAGAACAAA--G--TC-AATCGCCAC-TTGTAAA-ATG------GTATCTTTTATCTCTGTTTCT-GGTGTCTG---------------GTTTCTTCGTATTGCCTTTTACACACa
gi|8 : GTTTGACATAATACA-CTTCCTTGTAAA---CTAACTTTTGTG-G---GCTTG-TACGGATAAATTTCAACT-GCATAAGTTAAGTCTGCTG-TCGGTTAAT-CC---TGTTAC--TTAAAGCAGAT-T-----------GGGTCACAG-AGGGGAATTTAGAGCCAG-T--GATTT-GGT--AAATGAAGTGTCAAAA-T------------TGAC--A--------CGTGCTC-GCACAACATC-GACAAAAGCAAGTC-AGCGTAA--TACACAG-GG-----GATGTATAATTTTCAAAC------T-AGGTATTATC--AATAATCAACAAAAAGA----G--TC-AATCTCCAC-TTGTAAATTT--------------GTATCTCT--------GTGTCTGGT------GT--CTCG-TTCTTCGTATTG-CTTTTACCCACa
gi|9 : CTCTGTGTAAA---CTAACTTT-ATG-GA--GCTTG-TGCAGACAA-TTTCAAC--ACATGGCTTA-GTCTGTTG-TTT-TTAATTCC---TGT-ACA-TCAAAGCAGCC-T-----------GGGTCAAAG-AGAGCAGTTTAGAGCCAG-TCCGATGT-GGT--AAATGAAGTGTCAAAA-T------------TGACATA--------TATGCTCTGCACCTCGAT-GAC-AAAGCAGTCC-AGCGT-ATTTACACAG-AG-----GATGTAT--CTTTCAAGC------G-A-GTATTATA--AAT-ATCAACAAAAACAAAACG--TC-AATCGCCAC-TTGTAAATTTG------GTATC--------------CT-GGTATCTGGT------GT--CTCGTTTCTTCGTATTGCCTTTTACACACa