lowQualScore : 111111111 111111111 111111 111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111 11111111111 111111111111111111111 111111111111111111111111111111111111111 11111111
lowQualScore : 22 1 555555555 1 1 1 666666666 11 6666666666666 1 11 3333 1 111111 1 4444 2 1 1 11 1 1 11 333333333 11 1111 4444444444 1 1 1 11111 111 1111 33333 1 3333333 111111111111111111111111111111111111111111111111111111111111111111111 11 2222 22222 1 111 999999999999999999999999999 1 22222222222 1 3333333333 4444444 11 22 11 111111 333333333333333333333 111 11 222 1111 1 33333333333333333 11 11 2222222 111 8888888888888888888888888 1 2222 999999999999 1 1 1 111 1 1 1 11 4444444 11 333333333 000000000000000000000 11 111 1 555 11 1 1 11 888888888888 11 1 1 2 11 3333333333 11 11111111111 22222 2222 1 11 3333333 222 1 1 1 1 222 444444 1 22 222222 1 99999999999999999999 1 2 1 22 666666666666666666666 1 333333333333333333333333333333333333333 11 11111 222222 1 1 33333333333333 11 11 11 1 444444444444444 1 22222 111 2222 11 1 11 333333 33333 1 11 1 22 2222 444444444444 11 22222 11 11111111 1
lowQualScore : 6 11 5 6 111111111 7 6 5 5 6 6 6 000000000 99 6 3 6 6 7777777777777 0 6 00 6 7777 3 5 4 2 2 555555 6 1 2 88 2222 3 2 2 2 5 0 3 66 0 2 33 888888888 3 00 3 2 6 3 2 1111 3333333333 0 2 0 0 55555 777 0000 11111 0 2222222 000000000000000000000000000000000000000000000000000000000000000000000 33 22 2 1111 3 66666 0 111 555555555555555555555555555 3 0 2 44444444444 3 2222222222 8888888 44 6 1 11 999 5 0 55 666666 6 333333333333333333333 5 6 6 444 88 333 1 2 4 4444 3 99 1 3 55555555555555555 2 88 22 77 5555 6666666 111 5 6666666666666666666666666 2 3 5 2 5 5555 99 33 1 4 0 6 111111111111 3 1 5 6 0 3 6 333 999 5 6 6 1 0 6 6 88 3333333 99 8 6 2 6 7 66 444444444 5 6 999999999999999999999 99 44 99 333 6 0 8 6 1 1 3 6 444 99 2 0 0 3 88 2 3 888888888888 33 5 2 2 7 0 4 3 6 88 0000000000 88 88 7 6 6 6 88888888888 66666 8888 3 7 00 4 2222222 333 7 6 3 6 1 3 3 7 3 3 1 6 333 111111 2 2 5 6 77 999999 6 5 77777777777777777777 6 4 4 2 6 0 0 6 5 33 444444444444444444444 6 6 2 4 66 5 2 4 3 2 6 2 222222222222222222222222222222222222222 4 99 4 0 2 55555 888888 0 0 0 66666666666666 33 8 11 44 6 0 33 5 0 000000000000000 0 00000 8 8 6 444 0000 6 66 888 8 8 3 11 3 333333 33333 1 3 88 2 6 88 77 3333 6 777777777777 1 6 1 66 77777 44 3 22222222 4 4 1
lowQualScore : . .. . . ......... . . . . . . . ......... .. . . . . ............. . . .. . .... . . . . . ...... . . . .. .... . . . . . . . .. . . .. ......... . .. . . . . . .... .......... . . . . ..... ... .... ..... . ....... ..................................................................... .. .. . .... . ..... . ... ........................... . . . ........... . .......... ....... .. . . .. ... . . .. ...... . ..................... . . . ... .. ... . . . .... . .. . . ................. . .. .. .. .... ....... ... . ......................... . . . . . .... .. .. . . . . ............ . . . . . . . ... ... . . . . . . . .. ....... .. . . . . . .. ......... . . ..................... .. .. .. ... . . . . . . . . ... .. . . . . .. . . ............ .. . . . . . . . . .. .......... .. .. . . . . ........... ..... .... . . .. . ....... ... . . . . . . . . . . . . ... ...... . . . . .. ...... . . .................... . . . . . . . . . .. ..................... . . . . .. . . . . . . . ....................................... . .. . . . ..... ...... . . . .............. .. . .. .. . . .. . . ............... . ..... . . . ... .... . .. ... . . . .. . ...... ..... . . .. . . .. .. .... . ............ . . . .. ..... .. . ........ . . .
lowQualScore : 0 00 0 0 000000000 0 0 0 0 0 0 0 000000000 55 0 0 0 0 0000000000000 5 0 00 0 5555 0 0 0 5 5 000000 0 5 5 55 5555 0 5 5 5 0 7 3 00 0 8 88 000000000 2 22 2 5 0 5 5 2222 8888888888 0 5 0 0 00000 555 2222 55555 0 2222222 000000000000000000000000000000000000000000000000000000000000000000000 88 88 5 2222 2 55555 0 000 222222222222222222222222222 0 0 5 33333333333 3 2222222222 2222222 00 7 0 44 333 7 7 44 777777 0 999999999999999999999 2 7 7 222 33 333 0 5 8 2222 7 55 0 3 55555555555555555 2 33 88 33 7777 2222222 777 2 8888888888888888888888888 2 3 5 5 5 3333 22 55 5 0 7 7 999999999999 8 4 0 6 6 2 0 222 888 0 0 0 8 6 0 4 33 3333333 22 0 7 2 7 8 88 000000000 7 7 777777777777777777777 22 66 22 000 4 6 0 7 0 0 3 7 000 55 5 0 0 2 88 5 5 555555555555 88 0 0 0 8 2 7 3 7 33 0000000000 00 33 3 0 7 0 77777777777 33333 3333 3 3 33 7 7777777 333 3 0 7 7 0 3 3 0 3 3 0 7 333 000000 5 5 5 0 55 000000 0 0 00000000000000000000 0 0 0 5 0 5 0 0 0 00 000000000000000000000 0 0 5 0 55 0 5 0 0 5 0 5 888888888888888888888888888888888888888 7 77 2 8 5 00000 888888 8 8 0 00000000000000 88 0 00 44 5 8 55 5 2 888888888888888 0 00000 0 0 2 000 0000 4 88 666 0 6 2 00 2 888888 22222 0 3 33 0 0 33 33 0000 0 333333333333 0 0 0 33 00000 55 0 00000000 0 0 5
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGNATACTAGNATTCTGAAAAGAAGCAGAAATGCTTGGGCTAGTAGAATGAGAAACACGANNAANNTACCATCGTCTGCTTTGGTTTCTTTANAGGAAATCNGATTTTCCCTCAGANGTGTACGTGCAGTTTTCACTCNGAATAAATCCGTGTCTGATCGCTNCGAGTNAGATTCGGATGACACATCAGTTTCTGANGAATTNTGTATTTNAGTCGGTTGTTTTTTTTTTTCTTNTTGCCTTGGCTACNGGAGGATCTANTTCACCGGGAGGAATGAAACTAAAGGGCAATAGC-ATATTTCGGTGTAGGGTCC-TAATT--CCC------CTTCCAGAAATGCTTTTCACCTTGTACACCGGNACTTCTGGGTTTGGTATGCTGCGG-A-TGGTATA----------TACCTCTG-AATCCCA-TTTA-TCTGCTAGCTTATGTTTC---CCTTTAATA-CC-N---ACTTTCCTCACCAAG-ACT--CTGTCTCCCGCTTCTAA---TT-------TGAA-TACCT--CACCTTT---AAGTCATATCG-G--TCCTTA--T-----TTTT--GGTGGCAATCCTGTTGGC----TTCTGATGATGCAACTG-AAAA-A-GCGGA--C-ACCATGCTC-----TCCTN-AAGCTT-TGNAAC--------A--TAAGTG-CTG-TG------GTCTCCCC-----TTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-CG-TCAATCGGCAG---NC-TCGGA---TGCCAC-CAAACATNAGAT-AATGTGG-G-TGAAT--CC---TGTGGCATC-GT-TCNTG-GTTGCGTTGT-ATGCNC---GAACNA-----ATGAT--GCAATGTAGGAT-TTCCAGCCAGATNT--CT---GNTCAGTTTCC-------AGT---G-C---------TTGACGGCATTTT-AATNAGTGTTTGATTAAACCNTT--CAGCA--GANCCGTTTCCCNTAGGATGGTG-ATAGGCAAGGCGTCGTCCTGGTTTTCTTTATTNCTAGCTATCCTACATANTTCTTTNATTGACGCTTGGATGTCGAAATTCC--GCCC-------TC--GNTCA-CNGCG-AAGTTTCTC-GGAAAAC-----T-GTAATG-AAG-----------------G-AAAA--GTTTTCGTATAGAGCTTTAGCAGTACGT-A-TGCGCTGTTTGA-TTCCTGCATGGGATGGCTT-GGGCAAA--ATCTTGTAAAATGGTCTGTAA-TTACCAA-GACATTCTC-AAAACCTCCCT---GGAT-TTCT--AGACTCAAAAAGTCNATGCAAACNA-ATTCCA-TGG--GTCTTGTC-CG-AGAATTGGTACA--AGTTCTGCTGCAGGCCTGACTGGAGTTT-----------TACATCTGNTGC-ACGAG----TCTAC-ATGTTGGTTCGCATCT---TG-TTCT---ATTCCTGGCCAATAGTANCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCC-GGGTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCNGGGAAANANTCTGGTAATACTAACTGTCTAACCTGCTGGCCAAATCATGAGTAGAGGTTTTATACGAGACATCNNNNNNNAATTGCAACTT--TCTCCACTCTCTAAAATGTCTCNGCACCTCTGANGNTTCCCTCCTCGTGTTCACCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTTTTTA----CTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGGGNTGNTNNATCCACGAACACGNTTTGNCNACATGNTATGGATACAGAGGNTGCCTGGCACAGAGCNCTTTCACTGCTGTCAGTAA--AAAAT---TGGCTTCCTTGANAG-CCGTCCGCATCTGCATTCAAAT-NACC-ATT--TCCGTACGA-TATATCGAAATTATAGCTGGCT--A-GAGCA--GCTA-CCCATCTCTGGCTAGTGGCATCCAGCTTNG-CTTTG-TGA-GT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGAC-TG-AAATTGNTT-NTCATANAGATAAT-CGTGNAAC--TTNTCACATACC-GCCCACTT----NAGAGC-CAA--AAACTCTANTTTGTGAGCGGGGTAG-TNTTCTC--ACTCNNTC--TAGACCTCTGCTTGCATAAGCAATTACCCTCTGTCTNNCCTNCCTGTT----GACCTGGTACAGNACNGCNCCT
Reference ( gi|1 ) : CTGTCATGTGGTCCAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATATAAAT--TTTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTC-C--ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGG----TTTCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCC-TACTT--CCT------TCTCCAGAAAAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATA----------TACCTCTG-AATCCCA-TTTA-TCTGCTAGATTATGTTTC---CCTTTAGTA-CC-T---ACTTTCCTCACCAAG-ACT--ATGTATCCCAC---------TT-------TGAA-TACCT--CACTTTT---AAGTCATATTG-G--TC---A--T-----TTTT--GGTGGCAATCCTGTTGGC----TTCTGATGGTGCGACTG-AAAA-A-GCTTA--C-ACCATGCTT-----TCCTT-AAGCTT-TGCAAC--------A--TAAGTG-CTA-TG------GTCTCCCT-----TTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-CA-TCAGTTGGCAG---TT-TTGGA---TGCCAGCCAAACATGAGAT-AATGTGG-G-TAAAT--CC---TGTGGCGTC-GT-TCCTA-GTTGCATTGT-ATGCCT---GAACTA-----ATGGT--GCAATGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT---G-----------TTGACAACATTCT-AATTAGTGTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGGGATGGTACATATGTAAGGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC-------TT--GTTTA-CTGTG-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------G-ACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAATAGCTT-GGGCAAATCATCTTGTAAATTGGTCTGTAA-TTACCAA-GACATTCTT-AAAACCTCTCT--AGAATGTTCT--AAACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCA--AGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACAT--ATACATCTGCTGC-ACGAG----TCTAC-ATGTTGGTTCACATCG---TG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCT-GTGTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATCATGAGTAGAGGTTTTATACAGGACATCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACA-ATTTCTGCACCTCTGAAGGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGA--TCT-----TG-TGTCAGTAAATAAAAT---TGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAAT-TACC-ACT--TCTGTATGA-TATATCACAATTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTG-TGA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGTG-AAATTGGTT-ACCATGCAGATAAT-CATGCAGC--TTGTCACTTAAC-GCCCATTT----CAAAGC-CAA--AACCTCCATCTTAGGAGCAGGGTAATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCT-TCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTTATC---GTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTTCCC-CAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACC
gi|4 : acggccatgTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACATAACG--TGTACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTC--AGATGTACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGA----TTT-TTTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCC-TAATT--CCC------CTTCCAGAAAAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATA----------TACCTCTG-AATCCCA-TTTA-TCTGCTAGCT--TGTTTC---CTTTTAATA-CC-A---ACTTTCCTCACCAAA-ACT--CTGTCTCCCACTTCTAAG--TT-------TGAA-TACCT--CACTTTT---AAGTCATATCA-T--TCCTTA--T-----TTTT--GGTGACAATCCTGTTGGC----TTCTGATGATGCAACTG-AAAT-A-GCAGA--C-GTCATGCGT-----TCTTG-AAGCTT-TGCAAC--------A--TAAGTG-CTG-TG------GTCTCAC------TTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-CA-TCAATTGACAG---TC-TCGGA---TGCCAGCCAAACTTGAGAT-AATGTGG-GTTAAAT--CC---TATGGCATC-GT-TCCTG-GTTGCATTTT-GTGCCT---GAACAA-----GTGGT--GCAATGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT---G-----------TTGACAACATTCT-AATTAGTGTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGGGATG--------GTAAGGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC-------TT--GGTCA-CCGTG-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------A-AAAA--taactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|10 : AACTAAAGGGCAATAGCGATATGTCGGTGTA--GTCC-TAATT--CCA------CTTCCAGAAATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTTC---CCTTTAATATCC-T---ACTTTCCGCACCAAGAACT--CTGTCTCCCACTTCTAATTTTT-------TAAA-TA-TT--CACCTTTTAAAAATCCT-TTG-G--TCCTTAATT-----TTTT--GGAGGCAATCCTGTTGGC----TTCTGATGAT-TAAATG-AAAACA-GCGGA----A--ATGCTCATAGGTCCTTAAAGCTT-TGGAAC--------A--TAAGTG-CTG-TG------GTCTCCAC-----TTTCACGTGTTCC--GGAA-TCCA-TGCC--AGAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|3 : AATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCC--------TTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATA----------AATCTCCT-CATCC-A-TTTT-TCAGCTA-ATT-TGTTCTTATCCTTCAA-A-GC-A---ACATTTCTCACCAAA-ACTCGAT---TCCTGC---------CT-------CTAA---CTTAACATCTTT---AA-CC---TTG-GCATC---A--TACCTGTTCT--TGT-----TCTTGTTCGCCATTTTCTG-CGACTCTGCTGTAGCA-A-TCTTATGC-AC--TGCCT-------CTA-ACTCTTCTGCAATTCATTGGAA--TAACCA-CTG-TGAGTTTAGTCTTC-------TTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG---CT-G-GGA---TTCCATCCGA-CATCAGAT-AGTGTGGAG-CATAT--CC---TGTTGCATC-AC-TCTTT-GTAGCGTTGT-ATGCTT---GAACCA-----ATGGA--GCAACGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG----G-----------TAATCAGCAACTT-GATCAGTGTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAGGATGGTAT--------GGTGTTG-CCTCGTTTTCTTTATACCTACC-ACTTTACATAACTCTTTCA-AGAC-CTTCGAT-TT--AGTTTC--TACC-------TT--GGTCA-CTGTACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------A-AGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAATAGCTT-GTG-AGA--ATCTAGTGAA-TGATCGGTTA-TGATCAA-AATA-TCTC-ATACCCACCCT--TGGAT-TTCTCAAGACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-CA-A----TGG-GAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT-----------TACTTCTGATGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCC-GGGTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACT
gi|2 : aaaaaaccagaatatggCC-TAACT--CCC------CTTCCAGAAATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATA----------TACCTCTG-AATCCCA-TTCA-TCTGCTAGCTTATGTTTC---CCTTTAATA-CCATGCAACTTTCCTTACCAAG-ACT--CTATCTCCCAC---------TTCTAATTTTGAAATATCC--CACTTT----AAGTCATATTGCG--TCCTTA--T-----TTTTTTGGTGGCAATCCT-TTGGC----TTCTGATGATG--ACTG-AAAA-AAGC-----CGACTA-GCTC-----T-------GCTT-GGAGAC--------ACTTAATTG-CTGGTG------GTCTCCAC-----TTTCA-GT-GTTC--GG-AGTCCA-TGC-AAGGAATA-CA-TCAATTGGTAG---TC-T--------------CAAACATGAGAT-AATGTGG-GGTAAAT--CC---CGTGGCCTC-AT-TCCTG-GTTGCATTGT-GTGCCT---GAACAA-----GTGTT--GCAATGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT---G-----------TCGACAACATTCT-AATGAGTGTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGGGATG--------GTAAGGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC-------TT--GGTCA-CTGTG-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA--GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGATGGCTT-GGGCAA---ATCTTGTAAAATGGTCTGTAA-TTACCAA-GACATTCTC-AAAA-----------------CT--AAAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACA--AGTTCTGCTGCAGGCCTGACTGGAGTTT--------------ATTTGTTGT-ACGAG----CCTAC-ATGCTGGTTAACATCT---TG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCT-GGGTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCG--GAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATCATGAGTAGAGGTTTTATACGAGACATCtccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|7 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAT--------A--TAAGTGACT---G------ATGTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGCG-TCAACTGACAA---ACATTGGG---TGCAACGCAAACATCAGAA-AATGT-G-G-TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA---TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGGC---------TTAATGGCATTTTGAATGAGAGTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGTC--GCTTA-TAGCA-ATATATCT--GGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-A-AA--ATTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|6 : AT--------A--TAAGTGACT---G------ATGTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGCG-TCAACTGACAA---ACATTGGG---TGCAACGCAAACATCAGAA-AATGT-G-G-TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA---TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGGC---------TTAATGGCATTTTGAATGAGAGTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGTC--GCTTA-TAGCA-ATATATCT--GGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-A-AA--ATTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|11 : --GA-A-TCCA-AGC--AGGAA----A-TCTATCGGTAG---TT-TAGGAAGATGCC---CAAACATAAGATGAAAGTGG-C-TGTAT--CC---TGT--TGTT-GTGTTTTGCGTTGCGTTGT-ACG------AAAATA-----ATAAC--TC--TGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT---GTCTTTATGGAATTGATAA-GTTGT-GAATAGT-TCT-ATTAAATCTTT--C-ACATTGAG-CGTTTCCTTCAGGATGATgca
gi|8 : CC--GCCC-------CTAGGTTTCTCTATG-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------G-AAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGATGGCTTTGGGCAAA--ATCTTGTAAAT-GGT-TGTAAATTACCAGTGACATTCTCCAAAACCTCTTTTAAAGATATTCT--TAACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACA--AGT-CTGCT-CAGGCCTGACTGGAGTTTTGCTAC-TGGATACATCTGC----ACGGG----TCTACCATGTTGATTCGCATCT---TGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATCATAAGTA------TTATACA
gi|4 : GTAAAATGGTCTGTAA-TTACCAA-GACATTCTA-AAAACCTC-----------CTTT--AGACTCAAAAGGTCTATGGAAA
gi|3 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAATTGCAACTT--TCTCCACTCTCTAAAATGTCTCTGTACCTCTGATGGTTCTCTCTTCATGTTCATCT
gi|2 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactTCANCACCTCTGAAGTTTCCCTCCTGGTATTT-CCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTTTTTA----CTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGA--GCTTTCACTG-TGTCAGTAA--AAAAT---AGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATT-GACC-ACT--TCCGTATGA-TATATCAAAATTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTG-TGA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACATG-AAATTGATT-ACCAAACAGATATC-CATGCAGC--TTGTCACATACA-ACCCATTtatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|14 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcacctaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacaTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGAGCTCT-----TACTGTC--TA-----------TG--------GAAA---------CATCTGCAATCAAAC-AACC-ATT--CCTGTACGA-TAT------------GCTGGCT--A-GTGCA--ACTA--CCACCTCT
gi|3 : AAAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCA--TCTACCCAGA--TCTATACGA-GATCGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG---AG--------AGC----AC---------GT-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTACTTG-GAATTGCGT-CTCATAAAGATAAT-CGTGAAAC--TTATCAC-AAACAGACCACTT----AAGAGC-TAA--GAACTCTAACTTGTGAGCAGGATA---GTTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCT-TCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCT
gi|5 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgCCATCCGCGTGAGCATT-GAAT-TTCC--TTGGTCGGTA-GACTATATTGAAGTTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC-----AACGGGTTTGTCCTGTAAATAAT-C-CG-AACATTTCTCGGTTATT-GACCACTT----GGGAGC-CAA--AAACTCTAGTTTATGGGTGGGGTAGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACC--CTGTCTAACCTGTTTGTT------CCTGGTACAGTACAGCACCaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|15 : aat-GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGCG-AAACTGATT-TCCGTAGAGATAAT-CATGTAGT--TTGTCACACACA-GCCCACTT----cagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-TGCAAATTGTTT-CTAATCC---TAATTCCTGGAAT--TCTTCCCATATG-GCCCATTTGCCGTAAAATGCAAGGAATTTTTATTGT--GAGCAGGGTAAATATTCTC--ACT-CTTCGATAGACTTCTGGTTACAT--GCAAg
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|13 ): CAGGGATTAAGCTTGTGAGAGTCTTGTGAAAAAAATAGTCGTTAATAACCCATATATTATTCTCTAATCCACACATAGAGATCTCACAAGACTCAGAAAATCTATTGCCTTGGATGTGTAGTTTCACTGGGACACATTTGTCTGGACTCTAGGCGACAG
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA
Alignments
lowQualScore : 33333333 3333333333 222222 11 4444 1 3333333333 222222 3333 11 111 22 11 111111111 22222 11 1 333333333 11 11 111111 111111 2222 111 222 11 1 222222222 22222 11 1111 1111 111 55555555555555555 1 22222222 11 5555555555 11 1 2 2 1 11 4444444 33 22222 8888888888888888888 111 22 11 11 11 1111 111 66666666666666666666 1 2 11 3333 5555555555555555555555555 1 2222 1 111 1 111 1 1 1 1 111 11 33 7777777777777777777777777777 1 2222 1 44444444444444 1 22222 4444 5555555555555 22222222 11 33 11 111111111 11 11 1 11 111 22222 1 222222 1 1 222 11 111 333 1 2 55555555
lowQualScore : 2 2 55555555 4 3 2 7 3 1 1 0 11 11 5555555555 0 1 1 111111 6 0 11 1 1 00 1 1 1 4444 1 1 1 0 0 0 6 3 8 1 0 1 2 8 8 5555555555 8 8 8 0 8 0 000000 1 8 5 2 3 8 1111 11 444 0 8 22 11 0 0 3 8 8 99 999999999 00000 3 8888 11 1 1 77 1 5 5 111111111 00 5 88 777 5 0 333333 888888 8 888 1111 1 5 5 999 000 55 1 5 1 66 555555555 3 88888 1 55 5555 5 0 3333 77 000 1 44444444444444444 0 5 1 1 1 00000000 1 55 77 1 1 1 4 8888888888 0 0 1 4 22 8 2 7 1 1 3 3 2 9 55 2222222 2 1 77 1 1 5 5 22 4 88888 5 3 5 0000000000000000000 444 1 44 999 3 6 2 11 8 00 11 4444 3 6 6 111 6 3 44444444444444444444 1 1 0 0 33 4444 9 3 2 0000000000000000000000000 0 1111 0 3 22 4 777 0 777 3 1 2 0 2 0 0 0 2 777 0 99 0 1 1 7 0 00 6 0 2222222222222222222222222222 7 6 3 7 7777 3 1 1 55555555555555 6 5 4 3 77777 4 2222 3 0 1 11 22 11 1 1 1 1 5555555555555 55 11111111 0 00 2 1 00 1 4 1 22 22 11 4 6 8 777777777 5 11 6 99 00 3 0 3 3 3 6 0 33 8 8 6 55 6 6 1 111 99999 1 1 1 6 0 1 6 1 9 666666 0 0 1 3 2 0 777 33 222 777 44 2 3 22 1 0 00000000 0 0 0 1 1 1
lowQualScore : . . ........ . . . . . . . . .. .. .......... . . . ...... . . .. . . .. . . . .... . . . . . . . . . . . . . . . .......... . . . . . . ...... . . . . . . .... .. ... . . .. .. . . . . . .. ......... ..... . .... .. . . .. . . . ......... .. . .. ... . . ...... ...... . ... .... . . . ... ... .. . . . .. ......... . ..... . .. .... . . .... .. ... . ................. . . . . . ........ . .. .. . . . . .......... . . . . .. . . . . . . . . . .. ....... . . .. . . . . .. . ..... . . . ................... ... . .. ... . . . .. . .. .. .... . . . ... . . .................... . . . . .. .... . . . ......................... . .... . . .. . ... . ... . . . . . . . . . ... . .. . . . . . .. . . ............................ . . . . .... . . . .............. . . . . ..... . .... . . . .. .. .. . . . . ............. .. ........ . .. . . .. . . . .. .. .. . . . ......... . .. . .. .. . . . . . . . .. . . . .. . . . ... ..... . . . . . . . . . ...... . . . . . . ... .. ... ... .. . . .. . . ........ . . . . . .
lowQualScore : 5 5 00000000 0 0 5 3 7 0 0 7 33 33 0000000000 7 0 0 333333 7 7 77 0 0 33 0 0 0 3333 0 0 0 7 7 0 5 2 0 4 8 0 8 0 0 0000000000 0 0 0 8 0 8 000000 0 0 0 8 8 0 4444 00 000 8 0 00 00 8 8 2 0 0 00 222222222 00000 2 2222 00 0 7 99 4 7 7 666666666 77 7 88 000 0 5 444444 666666 5 888 0000 0 7 7 333 000 77 4 7 0 11 999999999 0 66666 1 77 0000 7 4 7777 99 000 0 77777777777777777 4 7 7 4 0 77777777 0 77 99 0 4 0 3 2222222222 7 7 7 0 77 0 2 3 0 0 7 3 2 2 77 9999999 7 0 99 0 4 7 3 99 4 66666 7 6 7 3333333333333333333 555 0 77 333 7 7 5 00 0 88 00 2222 5 7 7 777 7 7 88888888888888888888 0 0 0 0 88 5555 2 2 5 2222222222222222222222222 0 2222 0 2 88 2 555 0 555 2 0 5 0 0 0 0 0 5 555 8 55 7 0 0 3 7 77 7 7 0000000000000000000000000000 3 7 3 3 3333 3 0 0 77777777777777 7 0 0 0 55555 0 5555 0 7 0 77 00 77 0 0 0 0 3333333333333 88 88888888 8 88 5 0 55 4 6 0 00 66 00 6 4 0 000000000 6 00 7 22 33 2 8 2 2 8 0 6 66 0 0 7 22 7 7 0 777 22222 0 0 0 7 5 0 7 0 3 000000 0 2 0 2 0 0 888 88 000 000 00 0 3 00 0 7 77777777 7 7 7 0 0 0
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACATAANT--TTTACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGGTT----TTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAA-TTTT--GAATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCCTNAA-GCT--TTGNAACA--TAAGTG-CT-GTG-GTCT---CC---NCTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC-------TCGGT--CACTGCG-AAGTTTCTCNGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCTGGTAATACTAACTGTCTAACCTGCTGGTC--ATCATGAGTAGAGGTTTTATACGAGACA----TCGAC----AATT-CAACT--TT-TCCGCTCTCTAA-AATGTCTC-GCACCT-CTGATGGTTCCCTCCT-GTGTTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAG-TCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGT-G-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGT-AGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCT-TCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
Reference ( family-2531 ) : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGNATACTAGNATTCTGAAAAGAAGCAGAAATGCTTGGGCTAGTAGAATGAGAAACACGANNAANNTACCATCGTCTGCTTTGGTTTCTTTANAGGAAATCNGATTTTCCCTCAGANGTGTACGTGCAGTTTTCACTCNGAATAAATCCGTGTCTGATCGCTNCGAGTNAGATTCGGATGACACATCAGTTTCTGANGAATTNTGTATTTNAGTCGGTTGTTTTTTTTTTTCTTNTTGCCTTGGCTACNGGAGGATCTANTTCACCGGGAGGAATGAAACTAAAGGGCAATAGC-ATATTTCGGTGTAGGGTCCTAATTCCCCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGNACTTCTGGGTTTGGTATGCTGCGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CNACTTTCCTCACCAAGA-CTCTGTCTCCCGCTTCTAA-TTT---GAATACCTC--ACCTTT---AAGTCATATCG-GTCCTTA--TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCGGACACCATGCTC-----TCCTNAA-GCT--TTGNAACA--TAAGTG-CT-GTG-GTCT---CC---CCTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---NC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCNTG-GTTGCGTTGTA-TGCNC---GAACNA-----ATGAT--GCAA---TGTAGGAT-TTCCAGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTTT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GANCCGTTTCCCNTAGGATGGTG-ATAGGCAAGGCGTCGTCCTGGTTTTCTTTATTNCTAGCTATCCTACATANTTCTTTNATTGACGCTTGGATGTCGAAATTCC--GCCC-------TCGNT--CACNGCG-AAGTTTCTC-GGAAAAC-----T-GTAATG-AAG-----------------G-AAAA--GTTTTCGTATAGAGCTTTAGCAGTACGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACNA-ATTCCA-TGG--GTCTTGTC-CG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACATCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTANCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCCGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCNGGGAAANANTCTGGTAATACTAACTGTCTAACCTGCTGGCCAAATCATGAGTAGAGGTTTTATACGAGACA----TCNNNNNNNAATTGCAACT--TTCTCCACTCTCTAA-AATGTCTCNGCACCT-CTGANGNTTCCCTCCTCGTGTTCACCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGGGNTGNTNNATCCACGAACACGNTTTGNCNACATGNTATGGATACAGAGGNTGCCTGGCACAGAGCNCTTTCACTGCTGTCAGTAA--AAA--ATTGGCTTCCTTGANAG-CCGTCCGCATCTGCATTCAAATNACCATT--TCCGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCATCTCTGGCTAGTGGCATCCAGCTTNG-CTTTG-TGA-GT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGAC-T-G-AAATTGNTTNTCATANAGATAAT-CGTGNA-ACTTNTCACATACCGCCCACTTN-----AGA-GCCAAAAACTCTANTTTGTGAGCGGGGT-AG-TNTTCTC--ACTCNNTC--TAGACCTCTGCTTGCATAAGCAATTACCCTCTGTCTNNCCTNCCTGTT----GACCTGGTACAGNACNGCNCCT
gi|1 : CAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATATAAAT--TTTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTCC---ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGGTT----TCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCCTACTTCCTTCTCCAGAA-AAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGATTATGTTT-CCCTTTAGTA-C----CTACTTTCCTCACCAAGA-CTATGTATCCCAC-------TTT---GAATACCTC--ACTTTT---AAGTCATATTG-GTC---A--TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGGTGCGA-CTG-AAAA-AGCTTACACCATGCTT-----TCCTTAA-GCT--TTGCAACA--TAAGTG-CT-ATG-GTCT---CC---CTTTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-C-ATCAGTTGGCAG---TT-TTGGA---TGCCAGC-CAAACATGAGAT-AATGT-GG-G-TAAAT---CC--TGTGGCGTCG-T-TCCTA-GTTGCATTGTA-TGCCT---GAACTA-----ATGGT--GCAA---TGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGGGATGGTACATATGTAAGGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC-------TTGTT--TACTGTG-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------G-ACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAAT--AGCTT-GGGCAAATCATCTTGT----AAATTGGTCTGTAA-TTACCAA-GACATT---CTT-AAAACCTCTC-TA--GAATGTTCT----AAACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCAAGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACATATACATCTGC-------TGC-ACGAG----TCTAC-ATGTTGGTTCACAT---CGTG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCTGT-GTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATCATGAGTAGAGGTTTTATACAGGACA----TCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACAATTTCT--GCACCT-CTGAAGGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGA--TCT-----TG-TGTCAGTAAATAAA--ATTGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAATTACCACT--TCTGTATGA-TATATCACAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTG-TGA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGT-G-AAATTGGTTACCATGCAGATAAT-CATGCA-GCTTGTCACTTAACGCCCATTTC-----AAA-GCCAAAACCTCCATCTTAGGAGCAGGGT-AATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCT-TCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|10 : ctgtcatgtggtcAACTAAAGGGCAATAGCGATATGTCGGTGTAG--TCCTAATTCCACTTCCAGAA-ATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTT-CCCTTTAATATC----CTACTTTCCGCACCAAGAACTCTGTCTCCCACTTCTAA-TTTTTTAAATAT-TC--ACCTTTTAAAAATCCT-TTG-GTCCTTAATTTTTTGGAGGCAATC--CTGTTGGCTTCTGATGAT-TAA-ATG-AAAACAGCGGA-A--ATGCTCATAGGTCCTTAAAGCT--TTGGAACA--TAAGTG-CT-GTG-GTCT---CC---ACTTTCACGTGTTCC--GGAA-TCCA-TGCCA--GAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCA-
gi|11 : --GA-A-TCCA-AGC--AGGAA-----ATCTATCGGTAG---TT-TAGGAAGATGCC----CAAACATAAGATGAAAGT-GG-C-TGTAT---CC--TGTTG--TTG-TGTTTTGCGTTGCGTTGTA-----C---GAA--A-----ATAAT----AACTCTGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT----GTCTTTA-TGGAA--TT-GATAAGTTGTGAATAGTTCTATTAAATCTTT--CA-CATTGAG-CGTTTCCTTCAGGATGAT
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-T-GCAAATTGTTTCTAATCC---TAATTCCTGGA-ATTCTTCCCATATGGCCCATTTGCCGTAAAATGCAAGGAATTTTTATT-GTGAGCAGGGTAAA-TATTCTC--ACTC-TTCGATAGACTTCTGGTTACAT--GCAA
gi|13 : catttGGGATTAAGCTT-GTG-AGA--GTCTTGTGAAAAAAATAGTCGTTAA-TAACCCA-TATATTATTCTC-TAATCCACACAT---AGAG-ATCTCACAAGACTCAGAAAATCTATcaact
gi|14 : caTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGAGCTCT-----TACTGTC--TA----------TG--------GAAA---------CATCTGCAATCAAACAACCATT--CCTGTACGA-TAT--------------GCTGGCT--A-GTGCA--ACTA--CCACCTCTtgccttggatgtgtagtttcactgggacacatttgtctggactctaggcgacag
gi|15 : -GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGC-G-AAACTGATTTCCGTAGAGATAAT-CATGTA-GTTTGTCACACACAGCCCACTT
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTT---ATCGTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTTCCC-CAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACCg
gi|2 : acggccatgCCTAACTCCCCTTCCAGAA-ATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTC-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCATGCAACTTTCCTTACCAAGA-CTCTATCTCCCACTTCTAA-TTTTG-AAATATCCC--A-CTTT---AAGTCATATTGCGTCCTTATTTTTTTGGTGGCAATC--CT-TTGGCTTCTGATGATG--A-CTGAAAAA-AGCCG--ACTA-GCTC-----T-------GCT--TGGAGACACTTAATTG-CTGGTG-GTCT---CC---ACTTTCA-GT-GTTC--GG-AGTCCA-TG-CAAGGAATA-C-ATCAATTGGTAG---TC-T---------------CAAACATGAGAT-AATGTGGG-G-TAAAT---CC--CGTGGCCTCA-T-TCCTG-GTTGCATTGTG-TGCCT---GAACAA-----GTGTT--GCAA---TGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT----G--TCGA-CAACATTCT-AATGAGT--------GTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGGGATGGT--------AAGGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC-------TTGGT--CACTGTG-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA--GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGGC-AA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAA------------------CT----AAAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT------------ATTTGT-------TGT-ACGAG----CCTAC-ATGCTGGTTAACAT---CTTG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCC--GGAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATCATGAGTAGAGGTTTTATACGAGACA----TCA----------------------NCAC-CTCTGA-A--GTTTC----CCTCCTGGTATTTCC---------------TTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAG--CTTTCACTG-TGTCAGTAA--AAA--ATAGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATTGACCACT--TCCGTATGA-TATATCAAAA--TTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTG-TGA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACAT-G-AAATTGATTACCAAACAGATATC-CATGCA-GCTTGTCACATACAACCCATTtaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|3 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCCTTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATAA----------ATCTCCTCA-TCC-ATTT-TT-CAGCTAATTTGTTCTTATCCTTCAA-A-G----CAACATTTCTCACCAAAA-CTCGAT-TCCTGCCTCTAA-CTT----AACATCTTTAACCTTG---GCATCATACCT-GTTCTTG--TTCTTGTTCGCCATTTTCTGC-GACT-CTGCTGTAGCAATCTT-ATGC-A-CTGCCTCTA-ACTC-----TTCTGCA-ATTCATTGGAA----TAACCA-CT-GTGAGTTTAGTCT---TCTTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG----C-TGGGA---TTCCA-T-CCGACATCAGAT-AGTGT-GGAG-CATAT---CC--TGTTGCATCA-C-TCTTT-GTAGCGTTGTA-TGCTT---GAACCA-----ATGGA--GCAA---CGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG-----G---TAATCAGCAACTT-GATCAGT--------GTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAGGATGGT--AT------GGTGTTG-CCTCGTTTTCTTTATACCTA-CCACTTTACATAACTCTTTCA-AGAC-CTTCGATTT---AGTTTC--TACC-------TTGGT--CACTGTACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------A-AGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAAT--AGCTT-GTG-AGA--ATCTAGT-----GAATGATCGGTTA-TGATCAA-AATA-T---CTC-ATACCCACCCTT---GGAT-TTCTCA--AGACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-C----AATGGGAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT---------TACTTCTGA-------TGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCCGG-GTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACTTCCCTG
gi|3 : aaaaaaccagaatatggTTATATACAAAACTCCTTTCAACTACTAATTGCAACT--TTCTCCACTCTCTAA-AATGTCTCTGTACCT-CTGATGGTTCTCTCTTCATGTTCATCTT-ATGTGGTC-TAAATCtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|3 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaaCTTTTACT-TTCTCATTGA--AAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCATCTACCCAGA--TCTATACGA-GAT--CGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG---AG-AGCAC--------------------GT-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTAC-TTG-GAATTGCGTCTCATAAAGATAAT-CGTGAA-ACTTATCACAAACAGACCACTTA-----AGA-GCTAAGAACTCTAACTTGTGAGCAGGAT-AG---TTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCT-TCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCTctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACATAACG--TGTACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTCAGA--TGTACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGATT-----TTTTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCCTAATTCCCCTTCCAGAA-AAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCT--TGTTT-CCTTTTAATA-C----CAACTTTCCTCACCAAAA-CTCTGTCTCCCACTTCTAAGTTT---GAATACCTC--ACTTTT---AAGTCATATCA-TTCCTTA--TTTTTGGTGACAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAT-AGCAGACGTCATGCGT-----TCTTGAA-GCT--TTGCAACA--TAAGTG-CT-GTG-GTCT----C---ACTTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-C-ATCAATTGACAG---TC-TCGGA---TGCCAGC-CAAACTTGAGAT-AATGT-GG-GTTAAAT---CC--TATGGCATCG-T-TCCTG-GTTGCATTTTG-TGCCT---GAACAA-----GTGGT--GCAA---TGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGGGATGGT--------AAGGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC-------TTGGT--CACCGTG-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------A-AAAA--aatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : GT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTA-AAAACCTCC------------TTT----AGACTCAAAAGGTCTATGGAAAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|5 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-CCATCCGCGTGAGCATT-GAATTTCC-TTGGTCGGTA-GACTATATTGAAG--TTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC-----AACGGGTTTGTCCTGTAAATAAT-C-CGAACATTTCTCGGTTATTGACCACTTG-----GGA-GCCAAAAACTCTAGTTTATGGGTGGGGT-AGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACC--CTGTCTAACCTGTTTGTT------CCTGGTACAGTACAGCACC
gi|6 : aatATA--TAAGTGACT-GAT-GTCC---CTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTAT-GTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGTCGCT--TATAGCA-ATATATCT--GGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGcagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|7 : ATA--TAAGTGACT-GAT-GTCC---CTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTAT-GTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGTCGCT--TATAGCA-ATATATCT--GGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|8 : CC--GCCCC------TAGGTTTCTCTATG-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------G-AAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGAT--GGCTTTGGGCAAA--ATCTTGT----AAA-TGGT-TGTAAATTACCAGTGACATT---CTCCAAAACCTCTT-TTAAAGATATTCT----TAACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACAAGT-CTGCT-CAGGCCTGACTGGAGTTT---------TGCTACTGGATACATCTGC-ACGGG----TCTACCATGTTGATTCGCAT---CTTGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATCATAAGTA------TTATACgca
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA
Alignments
lowQualScore : 11111111111111111111111
lowQualScore : 33333333 2222 1 2 11 2222 1 3333333333 222222 11111 11 111 22 11 1111111 22222 11 1 222222222 11 11 111111 111111 2222 111 222 11 1 222222222 22222 11 1111 1111 111 55555555555555555 1 22222222 11 7777777777 1 1 1 1 11 33333 33333333 22222 8888888888888888888 111 11 11 11 11 1111 111 66666666666666666666 1 2 11 2222 4444444444444444444444444 1 2222 1 111 1 111 1 1 1 1 111 2222 1 11 1 11 2222 2222 22222222222222222222222 1 3333 4 1 2 22222 2222 5555555555555 22222222 11 11 111111111 11 11 1 11 111 1 22222 1 11 111 11 55555555
lowQualScore : 1 1 55555555 1 1 1 7 3 8888 1 5 3 1 6 6 3 00 1 8888 7 0 6 1 8 1 0 1 8 8 5555555555 8 8 8 0 8 0 000000 1 8 5 3 3 88888 11 444 0 8 66 0 11 0 0 3 8 8 99 1 6666666 00000 3 8888 11 1 1 77 1 5 5 555555555 00 5 88 777 5 0 333333 888888 8 888 1111 1 5 5 999 000 55 1 5 1 66 555555555 3 88888 0 55 5555 5 1 0 3333 77 000 1 44444444444444444 0 5 00 1 1 00000000 1 55 77 0 1 1 4 1111111111 0 0 1 1 7 1 8 7 1 1 3 3 3 3 55 00000 77 00000000 5 1 4 88888 5 3 5 0000000000000000000 444 1 44 999 3 6 2 11 8 00 11 4444 3 6 6 111 6 3 44444444444444444444 1 1 0 0 33 9999 9 3 2 7777777777777777777777777 0 1111 0 3 22 4 777 0 777 3 0 2 0 0 0 0 2 777 0 5555 0 2 3 5 0 33 0 33 0000 0 8888 0 33333333333333333333333 6 3 7 0000 7 0 0 3 6 6 1 1 77777 1 3333 1 0 3333333333333 55 11111111 0 77 2 1 00 1 1 22 22 11 6 8 777777777 5 11 6 99 00 3 0 3 3 3 6 0 33 8 8 6 55 6 6 1 111 3 6 1 1 1 6 5 1 6 1 6 00000 0 0 77 2 9 3 33 000 88 44 7 1 00000000 1
lowQualScore : . . ........ . . . . . .... . . . . . . . .. . .... . . . . . . . . . . .......... . . . . . . ...... . . . . . ..... .. ... . . .. . .. . . . . . .. . ....... ..... . .... .. . . .. . . . ......... .. . .. ... . . ...... ...... . ... .... . . . ... ... .. . . . .. ......... . ..... . .. .... . . . .... .. ... . ................. . . .. . . ........ . .. .. . . . . .......... . . . . . . . . . . . . . . .. ..... .. ........ . . . ..... . . . ................... ... . .. ... . . . .. . .. .. .... . . . ... . . .................... . . . . .. .... . . . ......................... . .... . . .. . ... . ... . . . . . . . . ... . .... . . . . . .. . .. .... . .... . ....................... . . . .... . . . . . . . . ..... . .... . . ............. .. ........ . .. . . .. . . .. .. .. . . ......... . .. . .. .. . . . . . . . .. . . . .. . . . ... . . . . . . . . . . . ..... . . .. . . . .. ... .. .. . . ........ .
lowQualScore : 0 0 00000000 0 0 0 3 7 3333 0 3 7 0 7 7 3 33 0 3333 3 0 5 0 0 4 8 0 0 0 0000000000 0 0 0 8 0 8 000000 4 0 0 8 6 00000 00 000 8 0 66 8 00 8 8 2 0 0 00 0 0000000 00000 2 2222 00 0 7 99 4 7 7 000000000 77 7 88 000 0 5 444444 222222 5 888 0000 0 7 7 333 000 77 4 7 7 11 999999999 0 66666 4 77 0000 7 4 4 7777 99 000 0 77777777777777777 4 7 66 4 0 77777777 0 77 99 7 4 0 3 5555555555 7 7 7 0 3 0 0 3 0 0 3 3 3 7 77 99999 99 33333333 3 0 0 66666 7 6 7 3333333333333333333 555 0 33 333 7 7 5 00 0 88 00 2222 5 7 7 777 7 7 88888888888888888888 0 2 0 0 88 5555 2 2 5 2222222222222222222222222 0 2222 0 2 88 2 555 0 555 2 2 5 0 0 0 0 5 555 8 2222 2 5 2 5 2 88 0 88 8888 7 3333 7 00000000000000000000000 7 3 3 3333 7 0 7 3 7 7 0 0 55555 0 5555 0 7 8888888888888 88 88888888 8 22 5 2 00 4 0 00 22 00 4 0 000000000 6 00 7 22 33 2 8 2 2 6 0 6 66 0 0 7 22 7 7 0 777 5 7 0 0 0 7 7 0 7 0 3 00000 0 2 88 0 8 0 88 000 88 00 3 0 33333333 0
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-TACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCCTNAA-GCT--TTGNAACA--TAAGTG-CT-GTG-GTCT---CCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGGT--CGCT----GTG-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTGA-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGA-G-CTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
Reference ( family-2531 ) : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTTTTACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCCTNAA-GCT--TTGNAACA--TAAGTG-CT-GTG-GTCT---CCN---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TCGGT--CACT----GCG-AAGTTTCTCNGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCTGGTAATACTAACTGTCTAACCTGCTGGTC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTT---TCCGCTCTCTAA-AATGTCTC-GCACCTCTGATGGTTCCCTCCT-GTGTTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGA-GTCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
gi|1 : CAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATA----TAAATTTTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTCC---ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGG----TTTCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCCTACTTCCTTCTCCAGAA-AAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGATTATGTTT-CCCTTTAGTA-C----CTACTTTCCTCACCAAGA-CTATGTATCCCAC-------TTT--G-AATACCTC--ACTTTT---AAGTCATATTG-GTC---A--TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGGTGCGA-CTG-AAAA-AGCTTACACCATGCTT-----TCCTTAA-GCT--TTGCAACA--TAAGTG-CT-ATG-GTCT---CCC---TTTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-C-ATCAGTTGGCAG---TT-TTGGA---TGCCAGC-CAAACATGAGAT-AATGT-GG-G-TAAAT---CC--TGTGGCGTCG-T-TCCTA-GTTGCATTGTA-TGCCT---GAACTA-----ATGGT--GCAA---TGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGGGATGGTACATATGTAAGGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC---TTGTT--TACT----GTG-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------G-ACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAAT--AGCTT-GGGCAAATCATCTTGT----AAATTGGTCTGTAA-TTACCAA-GACATT---CTT-AAAACCTCTC-TA--GAATGTTCT----AAACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCAAGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACATATACATCTGC-------TGC-ACGAG----TCTAC-ATGTTGGTTCACAT---CGTG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCTGT-GTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATC-ATGA--GTAGAGGTTTTATACAGGAC----ATCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACAATTTCT--GCACCTCTGAAGGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGA--TCT-----TG-TGTCAGTAAATAAA--ATTGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAATTACCACT--TCTGTATGA-TATATCACAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTG-TGA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGTG-AAATTGGTTACCATGCAGATAAT-CATGCA-GCTTGTCACTTAACGCCCATTTC-----AAA-GCCAAAACCTCCATCTTAGGAGCAGGGTAATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCTTCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|10 : ctgtcatgtggtcAACTAAAGGGCAATAGCGATATGTCGGTGTAG--TCCTAATTCCACTTCCAGAA-ATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTT-CCCTTTAATATC----CTACTTTCCGCACCAAGAACTCTGTCTCCCACTTCTAATTTTTTA-AATAT-TC--ACCTTTTAAAAATCCT-TTG-GTCCTTAATTTTTTGGAGGCAATC--CTGTTGGCTTCTGATGAT-TAA-ATG-AAAACAGCGGA-A--ATGCTCATAGGTCCTTAAAGCT--TTGGAACA--TAAGTG-CT-GTG-GTCT---CCA---CTTTCACGTGTTCC--GGAA-TCCA-TGCCA--GAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCA-
gi|11 : --GA-A-TCCA-AGC--AGGAA-----ATCTATCGGTAG---TT-TAGGAAGATGCC----CAAACATAAGATGAAAGT-GG-C-TGTAT---CC--TGTTG--TTG-TGTTTTGCGTTGCGTTGTA-----C---GAA--A-----ATAAT----AACTCTGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT----GTCTTTA-TGGAAT--T-GATAAGTTGTGAATAGTTCTATTAAATCTTT--CA-CATTGAG-CGTTTCCTTCAGGATGAT
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-TGCAAATTGTTTCTAATCC---TAATTCCTGGA-ATTCTTCCCATATGGCCCATTTGCCGTAAAATGCAAGGAATTTTTA-TTGTGAGCAGGGTAAATATTCTC--ACTC-TTCGATAGACTTCTGGTTACAT--GCAA
gi|13 : catttGGGATTAAGCTT-GTG-AGA--GTCTTGTGAAAAAAATAGTCGTTAA-TAACCCA-TATATTATTCTC-TAATCCACACAT---AGAG-ATCTCACAAGACTCAGAAAATCTATcaact
gi|14 : caTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGA-G-CTCT---TACTGTC--TA----------TG--------GAAA---------CATCTGCAATCAAACAACCATT--CCTGTACGA-TAT--------------GCTGGCT--A-GTGCA--ACTA--CCACCTCTtgccttggatgtgtagtttcactgggacacatttgtctggactctaggcgacag
gi|15 : -GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGCG-AAACTGATTTCCGTAGAGATAAT-CATGTA-GTTTGTCACACACAGCCCACTTG-----
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTT-----ATCGTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTT-CCCCAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACC
gi|2 : acggccatgCCTAACTCCCCTTCCAGAA-ATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTC-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCATGCAACTTTCCTTACCAAGA-CTCTATCTCCCACTTCTAATTTT--GAAATATCCC--A-CTTT---AAGTCATATTGCGTCCTTATTTTTTTGGTGGCAATC--CT-TTGGCTTCTGATGATG--A-CTGAAAAA-AGCCG--ACTA-GCTC-----T-------GCT--TGGAGACACTTAATTG-CTGGTG-GTCT---CCA---CTTTCA-GT-GTTC--GG-AGTCCA-TG-CAAGGAATA-C-ATCAATTGGTAG---TC-T---------------CAAACATGAGAT-AATGTGGG-G-TAAAT---CC--CGTGGCCTCA-T-TCCTG-GTTGCATTGTG-TGCCT---GAACAA-----GTGTT--GCAA---TGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT----G--TCGA-CAACATTCT-AATGAGT--------GTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGGGATGGT--------AAGGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC---TTGGT--CACT----GTG-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA--GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGGC-AA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAA------------------CT----AAAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT------------ATTTGT-------TGT-ACGAG----CCTAC-ATGCTGGTTAACAT---CTTG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCC--GGAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCANC----A-------------------CCTCTGA-A--GTTTC-----------------CCTCCTGGTATTT-CCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGA-G-CTTTCACTG-TGTCAGTAA--AAA--ATAGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATTGACCACT--TCCGTATGA-TATATCAAAA--TTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTG-TGA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACATG-AAATTGATTACCAAACAGATATC-CATGCA-GCTTGTCACATACAACCCATTtaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|3 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCCTTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATAA----------ATCTCCTCA-TCC-ATTT-TT-CAGCTAATTTGTTCTTATCCTTCAA-A-G----CAACATTTCTCACCAAAA-CTCGAT-TCCTGCCTCTAACTT-----AACATCTTTAACCTTG---GCATCATACCT-GTTCTTG-TTCTT-GTTCGCCATTTTCTGC-GACT-CTGCTGTAGCAATCTT-ATGC-A-CTGCCTCTA-ACTC-----TTCTGCA-ATTCATTGGAA----TAACCA-CT-GTGAGTTTAGTCTT---CTTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG----C-TGGGA---TTCCA-T-CCGACATCAGAT-AGTGT-GGAG-CATAT---CC--TGTTGCATCA-C-TCTTT-GTAGCGTTGTA-TGCTT---GAACCA-----ATGGA--GCAA---CGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG-----G---TAATCAGCAACTT-GATCAGT--------GTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAGGATGGT--AT------GGTGTTG-CCTCGTTTTCTTTATACCTA-CCACTTTACATAACTCTTTCA-AGAC-CTTCGAT-TT--AGTTTC--TACC---TTGGT--CACT----GTACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------A-AGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAAT--AGCTT-GTG-AGA--ATCTAGT-----GAATGATCGGTTA-TGATCAA-AATA-T---CTC-ATACCCACCCTT---GGAT-TTCTCA--AGACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-C----AATGGGAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT---------TACTTCTGA-------TGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCCGG-GTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACTTCCCTGT---ATACTTCA--AGTTTT--TTTTCT---CTTCTCTCC--ATCTATAACTGTA---ATTATATACAAAACTCCTTTCAACTACTAATTGCAACTTTC--TCCACTCTCTAA-AATGTCTCTGTACCTCTGATGGTTCTCTCTTCATGTTCATCTT-ATGTGGTC-TAAATC
gi|3 : aaaaaaccagaatatggACAAATGGCTTTTACT-TTCTCATTGA--AAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCATCTACCCAGA--TCTATACGA-GAT--CGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG---AG-AGCAC--------------------GT-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTACTTG-GAATTGCGTCTCATAAAGATAAT-CGTGAA-ACTTATCACAAACAGACCACTTA-----AGA-GCTAAGAACTCTAACTTGTGAGCAGGATAG---TTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCTTCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCTctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAACGTGTACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTCAGATGT--ACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGA----TTTT-TTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCCTAATTCCCCTTCCAGAA-AAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCT--TGTTT-CCTTTTAATA-C----CAACTTTCCTCACCAAAA-CTCTGTCTCCCACTTCTAAGTTT--G-AATACCTC--ACTTTT---AAGTCATATCA-TTCCTTA--TTTTTGGTGACAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAT-AGCAGACGTCATGCGT-----TCTTGAA-GCT--TTGCAACA--TAAGTG-CT-GTG-GTCT----CA---CTTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-C-ATCAATTGACAG---TC-TCGGA---TGCCAGC-CAAACTTGAGAT-AATGT-GG-GTTAAAT---CC--TATGGCATCG-T-TCCTG-GTTGCATTTTG-TGCCT---GAACAA-----GTGGT--GCAA---TGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGGGATGGT--------AAGGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC---TTGGT--CACC----GTG-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------A-AAAA--aatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : GT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTA-AAAACCTCC------------TTT----AGACTCAAAAGGTCTATGGAAAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|5 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCATCCGCGTGAGCATT-GAATTTCC-TTGGTCGGTA-GACTATATTGAAG--TTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC----AACGGGTTTGTCCTGTAAATAAT-C-CGAACATTTCTCGGTTATTGACCACTTG-----GGA-GCCAAAAACTCTAGTTTATGGGTGGGGTAGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACCCTGT-CTAACCTGTTTGTT------CCTGGTACAGTACAGCACC
gi|6 : aatATA--TAAGTGACT-GAT-GTCC---CTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGT--CGCTTATAGC---AATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGcagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|7 : ATA--TAAGTGACT-GAT-GTCC---CTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGGT--CGCTTATAGC---AATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|8 : CC--GCCCC--TAGGTTTCTCT----ATG-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------G-AAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGAT--GGCTTTGGGCAAA--ATCTTGT----AAA-TGGT-TGTAAATTACCAGTGACATT---CTCCAAAACCTCTT-TTAAAGATATTCT----TAACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACAAGT-CTGCT-CAGGCCTGACTGGAGTTT---------TGCTACTGGATACATCTGC-ACGGG----TCTACCATGTTGATTCGCAT---CTTGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATC-ATAA--GTA------TTATACgca
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA
Alignments
lowQualScore : 11111111111111111111111
lowQualScore : 33333333 2222 333333 22 11 2222 1 3333333333 222222 11111 11 111 22 11 1111111 222222222222 11 1 111111 2222 11 11 111111 111111 2222 111 222 11 1 222222222 22222 11 1111 1111 111 55555555555555555 1 22222222 11 7777777777 1 1 1 1 11 222 111 1 1 22222 8888888888888888888 111 11 11 11 11 1111 111 66666666666666666666 1 2 11 2222 4444444444444444444444444 1 2222 1 111 1 111 1 1 1 1 111 2222 1 11 1 11 2222 2222 00000000000000000000000 1 44444444444444 1 2 22222 2222 33333333 22222222 11 11 111111111 11 11 1 11 111 1 22222 1 11 111 11 55555555
lowQualScore : 1 1 55555555 1 1 1 7 3 8888 1 555555 1 6 6 00 00 1 8888 7 0 6 1 8 1 0 1 8 8 5555555555 8 8 8 0 8 0 000000 1 8 5 3 3 88888 11 444 0 8 66 0 11 0 0 3 8 8 99 1 6666666 000000000000 11 1 1 77 1 5 666666 7777 00 5 88 777 5 0 333333 888888 8 888 1111 1 5 5 999 000 55 1 5 1 66 555555555 3 88888 0 55 5555 5 1 0 3333 77 000 1 44444444444444444 0 5 00 1 1 00000000 1 55 77 0 1 1 4 1111111111 0 0 1 1 7 1 8 7 1 1 3 3 3 3 55 000 000 2 1 1 5 5 1 4 88888 5 3 5 0000000000000000000 444 1 44 999 3 6 2 11 8 00 11 4444 3 6 6 111 6 3 44444444444444444444 1 1 0 0 33 9999 9 3 2 7777777777777777777777777 0 1111 0 3 22 4 777 0 777 3 0 2 0 0 0 0 2 777 0 5555 0 2 2 3 5 0 33 0 33 0000 0 8888 0 88888888888888888888888 6 3 7 66666666666666 1 3 6 6 1 1 77777 1 3333 1 0 88888888 55 11111111 0 77 2 1 00 1 1 22 22 11 6 8 777777777 5 11 6 99 00 3 0 3 3 3 6 0 33 8 8 6 55 6 6 1 111 3 6 1 1 1 6 5 1 6 1 6 00000 0 0 77 2 9 3 33 000 88 44 7 1 00000000 1
lowQualScore : . . ........ . . . . . .... . ...... . . . .. .. . .... . . . . . . . . . . .......... . . . . . . ...... . . . . . ..... .. ... . . .. . .. . . . . . .. . ....... ............ .. . . .. . . ...... .... .. . .. ... . . ...... ...... . ... .... . . . ... ... .. . . . .. ......... . ..... . .. .... . . . .... .. ... . ................. . . .. . . ........ . .. .. . . . . .......... . . . . . . . . . . . . . . .. ... ... . . . . . . . ..... . . . ................... ... . .. ... . . . .. . .. .. .... . . . ... . . .................... . . . . .. .... . . . ......................... . .... . . .. . ... . ... . . . . . . . . ... . .... . . . . . . .. . .. .... . .... . ....................... . . . .............. . . . . . . ..... . .... . . ........ .. ........ . .. . . .. . . .. .. .. . . ......... . .. . .. .. . . . . . . . .. . . . .. . . . ... . . . . . . . . . . . ..... . . .. . . . .. ... .. .. . . ........ .
lowQualScore : 0 0 00000000 0 0 0 3 7 3333 0 000000 0 7 7 77 33 0 3333 3 0 5 0 0 4 8 0 0 0 0000000000 0 0 0 8 0 8 000000 4 0 0 8 6 00000 00 000 8 0 66 8 00 8 8 2 0 0 00 0 0000000 666666666666 00 0 7 99 4 7 444444 6666 77 7 88 000 0 5 444444 222222 5 888 0000 0 7 7 333 000 77 4 7 7 11 999999999 0 66666 4 77 0000 7 4 4 7777 99 000 0 77777777777777777 4 7 66 4 0 77777777 0 77 99 7 4 0 3 5555555555 7 7 7 0 3 0 0 3 0 0 3 3 3 7 77 000 000 7 4 4 7 3 9 0 66666 7 6 7 3333333333333333333 555 0 33 333 7 7 5 00 0 88 00 2222 5 7 7 777 7 7 88888888888888888888 0 2 0 0 88 5555 2 2 5 2222222222222222222222222 0 2222 0 2 88 2 555 0 555 2 2 5 0 0 0 0 5 555 8 2222 2 0 5 2 5 2 88 0 88 8888 7 3333 7 00000000000000000000000 7 3 3 33333333333333 0 3 7 7 0 0 55555 0 5555 0 7 88888888 88 88888888 8 22 5 2 00 4 0 00 22 00 4 0 000000000 6 00 7 22 33 2 8 2 2 6 0 6 66 0 0 7 22 7 7 0 777 5 7 0 0 0 7 7 0 7 0 3 00000 0 2 88 0 8 0 88 000 88 00 3 0 33333333 0
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
Reference ( family-2531 ) : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCC-TNAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
gi|1 : CAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATA----TAAATT-TTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTCC---ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGG----TTTCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCCTACTTCCTTCTCCAGAA-AAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGATTATGTTT-CCCTTTAGTA-C----CTACTTTCCTCACCAAGA-CTATGTATCCCAC-------TTT--G-AATACCTC--ACTTTT---AAGTCATATTG-GTC---A--TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGGTGCGA-CTG-AAAA-AGCTTACACCATGCTT-----TCC-TTAAGCT--TTGCAACA--TAAGTG-CT-ATG------GTCTCCC---TTTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-C-ATCAGTTGGCAG---TT-TTGGA---TGCCAGC-CAAACATGAGAT-AATGT-GG-G-TAAAT---CC--TGTGGCGTCG-T-TCCTA-GTTGCATTGTA-TGCCT---GAACTA-----ATGGT--GCAA---TGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGGGATGGTACATATGTAAGGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC---TTGT---TTAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------G-ACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAAT--AGCTT-GGGCAAATCATCTTGT----AAATTGGTCTGTAA-TTACCAA-GACATT---CTT-AAAACCTCTC-TA--GAATGTTCT----AAACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCAAGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACATATACATCTGC-------TGC-ACGAG----TCTAC-ATGTTGGTTCACAT---CGTG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCTGT-GTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATC-ATGA--GTAGAGGTTTTATACAGGAC----ATCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACAATTTCT--GCACCTCTGAA-GGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGATCT-----TG-TGTCAGTAAATAAA--ATTGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAATTACCACT--TCTGTATGA-TATATCACAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTG-TGA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGTG-AAATTGGTTACCATGCAGATAAT-CATGCA-GCTTGTCACTTAACGCCCATTTC-----AAA-GCCAAAACCTCCATCTTAGGAGCAGGGTAATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCTTCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|10 : ctgtcatgtggtcAACTAAAGGGCAATAGCGATATGTCGGTGTAG--TCCTAATTCCACTTCCAGAA-ATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTT-CCCTTTAATATC----CTACTTTCCGCACCAAGAACTCTGTCTCCCACTTCTAATTTTTTA-AATAT-TC--ACCTTTTAAAAATCCT-TTG-GTCCTTAATTTTTTGGAGGCAATC--CTGTTGGCTTCTGATGAT-TAA-ATG-AAAACAGCGGA-A--ATGCTCATAGGTCCTTAAAGCT--TTGGAACA--TAAGTG-CT-GTG------GTCTCCA---CTTTCACGTGTTCC--GGAA-TCCA-TGCCA--GAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCA-
gi|11 : --GA-A-TCCA-AGC--AGGAA-----ATCTATCGGTAG---TT-TAGGAAGATGCC----CAAACATAAGATGAAAGT-GG-C-TGTAT---CC--TGTTG--TTG-TGTTTTGCGTTGCGTTGTA-----C---GAA--A-----ATAAT----AACTCTGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT----GTCTTTA-TGGAAT--T-GATAAGTTGTGAATAGTTCTATTAAATCTTT--CA-CATTGAG-CGTTTCCTTCAGGATGAT
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-TGCAAATTGTTTCTAATCC---TAATTCCTGGA-ATTCTTCCCATATGGCCCATTTGCCGTAAAATGCAAGGAATTTTTA-TTGTGAGCAGGGTAAATATTCTC--ACTC-TTCGATAGACTTCTGGTTACAT--GCAA
gi|13 : catttGGGATTAAGCTT-GTG-AGA--GTCTTGTGAAAAAAATAGTCGTTAA-TAACCCA-TATATTATTCTC-TAATCCACACAT---AGAG-ATCTCACAAGACTCAGAAAATCTATcaact
gi|14 : caTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGAGCTCT---TACTGTC--TA----------TG--------GAAA---------CATCTGCAATCAAACAACCATT--CCTGTACGA-TAT--------------GCTGGCT--A-GTGCA--ACTA--CCACCTCTtgccttggatgtgtagtttcactgggacacatttgtctggactctaggcgacag
gi|15 : -GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGCG-AAACTGATTTCCGTAGAGATAAT-CATGTA-GTTTGTCACACACAGCCCACTTG-----
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTT------ATCGTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTT-CCCCAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACC
gi|2 : acggccatgCCTAACTCCCCTTCCAGAA-ATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTC-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCATGCAACTTTCCTTACCAAGA-CTCTATCTCCCACTTCTAATTTT--GAAATATCCC--A-CTTT---AAGTCATATTGCGTCCTTATTTTTTTGGTGGCAATC--CT-TTGGCTTCTGATGATG--A-CTGAAAAA-AGCCG--ACTA-GCTC-----T-------GCT--TGGAGACACTTAATTG-CTGGTG------GTCTCCA---CTTTCA-GT-GTTC--GG-AGTCCA-TG-CAAGGAATA-C-ATCAATTGGTAG---TC-T---------------CAAACATGAGAT-AATGTGGG-G-TAAAT---CC--CGTGGCCTCA-T-TCCTG-GTTGCATTGTG-TGCCT---GAACAA-----GTGTT--GCAA---TGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT----G--TCGA-CAACATTCT-AATGAGT--------GTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGGGATGGT--------AAGGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC---TTGG---TCAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA--GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGGC-AA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAA------------------CT----AAAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT------------ATTTGT-------TGT-ACGAG----CCTAC-ATGCTGGTTAACAT---CTTG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCC--GGAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCANC----A-------------------CCTCTGA-A--GTTTC------------------CCTCCTGGTATTT-CCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTG-TGTCAGTAA--AAA--ATAGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATTGACCACT--TCCGTATGA-TATATCAAAA--TTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTG-TGA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACATG-AAATTGATTACCAAACAGATATC-CATGCA-GCTTGTCACATACAACCCATTtaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|3 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCCTTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATAA----------ATCTCCTCA-TCC-ATTT-TT-CAGCTAATTTGTTCTTATCCTTCAA-A-G----CAACATTTCTCACCAAAA-CTCGAT-TCCTGCCTCTAACTT-----AACATCTTTAACCTTG---GCATCATACCT-GTTCTTG-TTCTT-GTTCGCCATTTTCTGC-GACT-CTGCTGTAGCAATCTT-ATGC-A-CTGCCTCTA-ACTC-----TTC-TGCAATTCATTGGAA----TAACCA-CT-GTGAGTTTAGTCTTC-----TTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG----C-TGGGA---TTCCA-T-CCGACATCAGAT-AGTGT-GGAG-CATAT---CC--TGTTGCATCA-C-TCTTT-GTAGCGTTGTA-TGCTT---GAACCA-----ATGGA--GCAA---CGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG-----G---TAATCAGCAACTT-GATCAGT--------GTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAGGATGGT--AT------GGTGTTG-CCTCGTTTTCTTTATACCTA-CCACTTTACATAACTCTTTCA-AGAC-CTTCGAT-TT--AGTTTC--TACC---TTGG---TCAC-TGT-ACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------A-AGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAAT--AGCTT-GTG-AGA--ATCTAGT-----GAATGATCGGTTA-TGATCAA-AATA-T---CTC-ATACCCACCCTT---GGAT-TTCTCA--AGACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-C----AATGGGAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT---------TACTTCTGA-------TGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCCGG-GTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACTTCCCTGT---ATACTTCA--AGTTTT--TTTTCT---CTTCTCTCC--ATCTATAACTGTA---ATTATATACAAAACTCCTTTCAACTACTAATTGCAACTTTC--TCCACTCTCTAA-AATGTCTCTGTACCTCTG-ATGGTTCTCTCTTCATGTTCATCTT-ATGTGGTC-TAAATC
gi|3 : aaaaaaccagaatatggTGACAAATGGCTTTTACT-TTCTCATTGA--AAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCATCTACCCAGA--TCTATACGA-GAT--CGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG---AG-AGCAC--------------------GT-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTACTTG-GAATTGCGTCTCATAAAGATAAT-CGTGAA-ACTTATCACAAACAGACCACTTA-----AGA-GCTAAGAACTCTAACTTGTGAGCAGGATAG---TTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCTTCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCTctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagttTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAACGTGT-ACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTCAGATGT--ACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGA----TTTT-TTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCCTAATTCCCCTTCCAGAA-AAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCT--TGTTT-CCTTTTAATA-C----CAACTTTCCTCACCAAAA-CTCTGTCTCCCACTTCTAAGTTT--G-AATACCTC--ACTTTT---AAGTCATATCA-TTCCTTA--TTTTTGGTGACAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAT-AGCAGACGTCATGCGT-----TCT-TGAAGCT--TTGCAACA--TAAGTG-CT-GTG------GTCT-CA---CTTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-C-ATCAATTGACAG---TC-TCGGA---TGCCAGC-CAAACTTGAGAT-AATGT-GG-GTTAAAT---CC--TATGGCATCG-T-TCCTG-GTTGCATTTTG-TGCCT---GAACAA-----GTGGT--GCAA---TGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGGGATGGT--------AAGGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC---TTGG---TCAC-CGT-G-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------A-AAAA--aatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : GT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTA-AAAACCTCC------------TTT----AGACTCAAAAGGTCTATGGAAAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|5 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCATCCGCGTGAGCATT-GAATTTCC-TTGGTCGGTA-GACTATATTGAAG--TTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC----AACGGGTTTGTCCTGTAAATAAT-C-CGAACATTTCTCGGTTATTGACCACTTG-----GGA-GCCAAAAACTCTAGTTTATGGGTGGGGTAGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACCCTGT-CTAACCTGTTTGTT------CCTGGTACAGTACAGCACC
gi|6 : aatATA--TAAGTGACT-GAT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGcagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|7 : ATA--TAAGTGACT-GAT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|8 : CC--GCCC---CTAGGTTTCTC-TAT-G-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------G-AAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGAT--GGCTTTGGGCAAA--ATCTTGT----AAA-TGGT-TGTAAATTACCAGTGACATT---CTCCAAAACCTCTT-TTAAAGATATTCT----TAACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACAAGT-CTGCT-CAGGCCTGACTGGAGTTT---------TGCTACTGGATACATCTGC-ACGGG----TCTACCATGTTGATTCGCAT---CTTGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATC-ATAA--GTA------TTATACgca
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA
Alignments
lowQualScore : 11111111111111111111111
lowQualScore : 33333333 2222 333333 22 11 2222 1 3333333333 222222 11111 11 111 22 11 1111111 222222222 11 1 111111 2222 11 11 111111 111111 2222 111 222 11 1 222222222 22222 11 1111 1111 111 55555555555555555 1 22222222 11 7777777777 1 1 1 1 11 222 111 1 1 22222 8888888888888888888 111 11 11 11 11 1111 111 66666666666666666666 1 2 11 2222 4444444444444444444444444 1 2222 1 111 1 111 1 1 1 1 111 2222 1 11 1 11 2222 2222 00000000000000000000000 1 44444444444444 1 2 22222 2222 33333333 22222222 11 11 111111111 11 11 1 11 111 1 22222 1 11 111 11 55555555
lowQualScore : 1 1 55555555 1 1 1 7 3 8888 1 555555 1 6 6 00 00 1 8888 7 0 6 1 8 1 0 1 8 8 5555555555 8 8 8 0 8 0 000000 1 8 5 3 3 88888 11 444 0 8 66 0 11 0 0 3 8 8 99 1 6666666 000000000 33 11 1 1 77 1 5 666666 7777 00 5 88 777 5 0 333333 888888 8 888 1111 1 5 5 999 000 55 1 5 1 66 555555555 3 88888 0 55 5555 5 1 0 3333 77 000 1 44444444444444444 0 5 00 1 1 00000000 1 55 77 0 1 1 4 1111111111 0 0 1 1 7 1 8 7 1 1 3 3 3 3 55 000 000 2 1 1 5 5 1 4 88888 5 3 5 0000000000000000000 444 1 44 999 3 6 2 11 8 00 11 4444 3 6 6 111 6 3 44444444444444444444 1 1 0 0 33 9999 9 3 2 7777777777777777777777777 0 1111 0 3 22 4 777 0 777 3 0 2 0 0 0 0 2 777 0 5555 0 2 2 3 5 0 33 0 33 0000 0 8888 0 88888888888888888888888 6 3 7 66666666666666 1 3 6 6 1 1 77777 1 3333 1 0 88888888 55 11111111 0 77 2 1 00 1 1 22 22 11 6 8 777777777 5 11 6 99 00 3 0 3 3 3 6 0 33 8 8 6 55 6 6 1 111 3 6 1 1 1 6 5 1 6 1 6 00000 0 0 77 2 9 3 33 000 88 44 7 1 00000000 1
lowQualScore : . . ........ . . . . . .... . ...... . . . .. .. . .... . . . . . . . . . . .......... . . . . . . ...... . . . . . ..... .. ... . . .. . .. . . . . . .. . ....... ......... .. .. . . .. . . ...... .... .. . .. ... . . ...... ...... . ... .... . . . ... ... .. . . . .. ......... . ..... . .. .... . . . .... .. ... . ................. . . .. . . ........ . .. .. . . . . .......... . . . . . . . . . . . . . . .. ... ... . . . . . . . ..... . . . ................... ... . .. ... . . . .. . .. .. .... . . . ... . . .................... . . . . .. .... . . . ......................... . .... . . .. . ... . ... . . . . . . . . ... . .... . . . . . . .. . .. .... . .... . ....................... . . . .............. . . . . . . ..... . .... . . ........ .. ........ . .. . . .. . . .. .. .. . . ......... . .. . .. .. . . . . . . . .. . . . .. . . . ... . . . . . . . . . . . ..... . . .. . . . .. ... .. .. . . ........ .
lowQualScore : 0 0 00000000 0 0 0 3 7 3333 0 000000 0 7 7 77 33 0 3333 3 0 5 0 0 4 8 0 0 0 0000000000 0 0 0 8 0 8 000000 4 0 0 8 6 00000 00 000 8 0 66 8 00 8 8 2 0 0 00 0 0000000 444444444 88 00 0 7 99 4 7 444444 6666 77 7 88 000 0 5 444444 222222 5 888 0000 0 7 7 333 000 77 4 7 7 11 999999999 0 66666 4 77 0000 7 4 4 7777 99 000 0 77777777777777777 4 7 66 4 0 77777777 0 77 99 7 4 0 3 5555555555 7 7 7 0 3 0 0 3 0 0 3 3 3 7 77 000 000 7 4 4 7 3 9 0 66666 7 6 7 3333333333333333333 555 0 33 333 7 7 5 00 0 88 00 2222 5 7 7 777 7 7 88888888888888888888 0 2 0 0 88 5555 2 2 5 2222222222222222222222222 0 2222 0 2 88 2 555 0 555 2 2 5 0 0 0 0 5 555 8 2222 2 0 5 2 5 2 88 0 88 8888 7 3333 7 00000000000000000000000 7 3 3 33333333333333 0 3 7 7 0 0 55555 0 5555 0 7 88888888 88 88888888 8 22 5 2 00 4 0 00 22 00 4 0 000000000 6 00 7 22 33 2 8 2 2 6 0 6 66 0 0 7 22 7 7 0 777 5 7 0 0 0 7 7 0 7 0 3 00000 0 2 88 0 8 0 88 000 88 00 3 0 33333333 0
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
Reference ( family-2531 ) : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
gi|1 : CAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATA----TAAATT-TTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTCC---ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGG----TTTCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCCTACTTCCTTCTCCAGAA-AAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGATTATGTTT-CCCTTTAGTA-C----CTACTTTCCTCACCAAGA-CTATGTATCCCAC-------TTT--G-AATACCTC--ACTTTT---AAGTCATATTG-GTC---A--TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGGTGCGA-CTG-AAAA-AGCTTACACCATGCTT-----TCC-TTAAGCT--TTGCAACA--TAAGTG-CT-ATG------GTCTCCC---TTTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-C-ATCAGTTGGCAG---TT-TTGGA---TGCCAGC-CAAACATGAGAT-AATGT-GG-G-TAAAT---CC--TGTGGCGTCG-T-TCCTA-GTTGCATTGTA-TGCCT---GAACTA-----ATGGT--GCAA---TGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGGGATGGTACATATGTAAGGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC---TTGT---TTAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------G-ACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAAT--AGCTT-GGGCAAATCATCTTGT----AAATTGGTCTGTAA-TTACCAA-GACATT---CTT-AAAACCTCTC-TA--GAATGTTCT----AAACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCAAGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACATATACATCTGC-------TGC-ACGAG----TCTAC-ATGTTGGTTCACAT---CGTG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCTGT-GTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATC-ATGA--GTAGAGGTTTTATACAGGAC----ATCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACAATTTCT--GCACCTCTGAA-GGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGATCT-----TG-TGTCAGTAAATAAA--ATTGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAATTACCACT--TCTGTATGA-TATATCACAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTG-TGA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGTG-AAATTGGTTACCATGCAGATAAT-CATGCA-GCTTGTCACTTAACGCCCATTTC-----AAA-GCCAAAACCTCCATCTTAGGAGCAGGGTAATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCTTCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|10 : ctgtcatgtggtcAACTAAAGGGCAATAGCGATATGTCGGTGTAG--TCCTAATTCCACTTCCAGAA-ATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTT-CCCTTTAATATC----CTACTTTCCGCACCAAGAACTCTGTCTCCCACTTCTAATTTTTTA-AATAT-TC--ACCTTTTAAAAATCCT-TTG-GTCCTTAATTTTTTGGAGGCAATC--CTGTTGGCTTCTGATGAT-TAA-ATG-AAAACAGCGGA-A--ATGCTCATAGGTCCTTAAAGCT--TTGGAACA--TAAGTG-CT-GTG------GTCTCCA---CTTTCACGTGTTCC--GGAA-TCCA-TGCCA--GAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCA-
gi|11 : --GA-A-TCCA-AGC--AGGAA-----ATCTATCGGTAG---TT-TAGGAAGATGCC----CAAACATAAGATGAAAGT-GG-C-TGTAT---CC--TGTTG--TTG-TGTTTTGCGTTGCGTTGTA-----C---GAA--A-----ATAAT----AACTCTGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT----GTCTTTA-TGGAAT--T-GATAAGTTGTGAATAGTTCTATTAAATCTTT--CA-CATTGAG-CGTTTCCTTCAGGATGAT
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-TGCAAATTGTTTCTAATCC---TAATTCCTGGA-ATTCTTCCCATATGGCCCATTTGCCGTAAAATGCAAGGAATTTTTA-TTGTGAGCAGGGTAAATATTCTC--ACTC-TTCGATAGACTTCTGGTTACAT--GCAA
gi|13 : catttGGGATTAAGCTT-GTG-AGA--GTCTTGTGAAAAAAATAGTCGTTAA-TAACCCA-TATATTATTCTC-TAATCCACACAT---AGAG-ATCTCACAAGACTCAGAAAATCTATcaact
gi|14 : caTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGAGCTCT---TACTGTC--TA----------TG--------GAAA---------CATCTGCAATCAAACAACCATT--CCTGTACGA-TAT--------------GCTGGCT--A-GTGCA--ACTA--CCACCTCTtgccttggatgtgtagtttcactgggacacatttgtctggactctaggcgacag
gi|15 : -GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGCG-AAACTGATTTCCGTAGAGATAAT-CATGTA-GTTTGTCACACACAGCCCACTTG-----
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTT------ATCGTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTT-CCCCAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACC
gi|2 : acggccatgCCTAACTCCCCTTCCAGAA-ATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTC-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCATGCAACTTTCCTTACCAAGA-CTCTATCTCCCACTTCTAATTTT--GAAATATCCC--A-CTTT---AAGTCATATTGCGTCCTTATTTTTTTGGTGGCAATC--CT-TTGGCTTCTGATGATG--A-CTGAAAAA-AGCCG--ACTA-GCTC-----T-------GCT--TGGAGACACTTAATTG-CTGGTG------GTCTCCA---CTTTCA-GT-GTTC--GG-AGTCCA-TG-CAAGGAATA-C-ATCAATTGGTAG---TC-T---------------CAAACATGAGAT-AATGTGGG-G-TAAAT---CC--CGTGGCCTCA-T-TCCTG-GTTGCATTGTG-TGCCT---GAACAA-----GTGTT--GCAA---TGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT----G--TCGA-CAACATTCT-AATGAGT--------GTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGGGATGGT--------AAGGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC---TTGG---TCAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA--GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGGC-AA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAA------------------CT----AAAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT------------ATTTGT-------TGT-ACGAG----CCTAC-ATGCTGGTTAACAT---CTTG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCC--GGAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCANC----A-------------------CCTCTGA-A--GTTTC------------------CCTCCTGGTATTT-CCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTG-TGTCAGTAA--AAA--ATAGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATTGACCACT--TCCGTATGA-TATATCAAAA--TTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTG-TGA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACATG-AAATTGATTACCAAACAGATATC-CATGCA-GCTTGTCACATACAACCCATTtaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|3 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCCTTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATAA----------ATCTCCTCA-TCC-ATTT-TT-CAGCTAATTTGTTCTTATCCTTCAA-A-G----CAACATTTCTCACCAAAA-CTCGAT-TCCTGCCTCTAACTT-----AACATCTTTAACCTTG---GCATCATACCT-GTTCTTG-TTCTT-GTTCGCCATTTTCTGC-GACT-CTGCTGTAGCAATCTT-ATGC-A-CTGCCTCTA-ACTC-----TTC-TGCAATTCATTGGAA----TAACCA-CT-GTGAGTTTAGTCTTC-----TTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG----C-TGGGA---TTCCA-T-CCGACATCAGAT-AGTGT-GGAG-CATAT---CC--TGTTGCATCA-C-TCTTT-GTAGCGTTGTA-TGCTT---GAACCA-----ATGGA--GCAA---CGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG-----G---TAATCAGCAACTT-GATCAGT--------GTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAGGATGGT--AT------GGTGTTG-CCTCGTTTTCTTTATACCTA-CCACTTTACATAACTCTTTCA-AGAC-CTTCGAT-TT--AGTTTC--TACC---TTGG---TCAC-TGT-ACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------A-AGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAAT--AGCTT-GTG-AGA--ATCTAGT-----GAATGATCGGTTA-TGATCAA-AATA-T---CTC-ATACCCACCCTT---GGAT-TTCTCA--AGACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-C----AATGGGAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT---------TACTTCTGA-------TGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCCGG-GTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACTTCCCTGT---ATACTTCA--AGTTTT--TTTTCT---CTTCTCTCC--ATCTATAACTGTA---ATTATATACAAAACTCCTTTCAACTACTAATTGCAACTTTC--TCCACTCTCTAA-AATGTCTCTGTACCTCTG-ATGGTTCTCTCTTCATGTTCATCTT-ATGTGGTC-TAAATC
gi|3 : aaaaaaccagaatatggTGACAAATGGCTTTTACT-TTCTCATTGA--AAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCATCTACCCAGA--TCTATACGA-GAT--CGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG---AG-AGCAC--------------------GT-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTACTTG-GAATTGCGTCTCATAAAGATAAT-CGTGAA-ACTTATCACAAACAGACCACTTA-----AGA-GCTAAGAACTCTAACTTGTGAGCAGGATAG---TTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCTTCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCTctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagttTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAACGTGT-ACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTCAGATGT--ACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGA----TTTT-TTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCCTAATTCCCCTTCCAGAA-AAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCT--TGTTT-CCTTTTAATA-C----CAACTTTCCTCACCAAAA-CTCTGTCTCCCACTTCTAAGTTT--G-AATACCTC--ACTTTT---AAGTCATATCA-TTCCTTA--TTTTTGGTGACAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAT-AGCAGACGTCATGCGT-----TCT-TGAAGCT--TTGCAACA--TAAGTG-CT-GTG------GTCT-CA---CTTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-C-ATCAATTGACAG---TC-TCGGA---TGCCAGC-CAAACTTGAGAT-AATGT-GG-GTTAAAT---CC--TATGGCATCG-T-TCCTG-GTTGCATTTTG-TGCCT---GAACAA-----GTGGT--GCAA---TGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGGGATGGT--------AAGGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC---TTGG---TCAC-CGT-G-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------A-AAAA--aatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : GT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTA-AAAACCTCC------------TTT----AGACTCAAAAGGTCTATGGAAAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|5 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCATCCGCGTGAGCATT-GAATTTCC-TTGGTCGGTA-GACTATATTGAAG--TTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC----AACGGGTTTGTCCTGTAAATAAT-C-CGAACATTTCTCGGTTATTGACCACTTG-----GGA-GCCAAAAACTCTAGTTTATGGGTGGGGTAGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACCCTGT-CTAACCTGTTTGTT------CCTGGTACAGTACAGCACC
gi|6 : aatATA--TAAGTGACT-GAT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGcagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|7 : ATA--TAAGTGACT-GAT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGT-GG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAG--TGGTG-ATAGGC--GGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTG-AAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|8 : CC--GCCC---CTAGGTTTCTC-TAT-G-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------G-AAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGAT--GGCTTTGGGCAAA--ATCTTGT----AAA-TGGT-TGTAAATTACCAGTGACATT---CTCCAAAACCTCTT-TTAAAGATATTCT----TAACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACAAGT-CTGCT-CAGGCCTGACTGGAGTTT---------TGCTACTGGATACATCTGC-ACGGG----TCTACCATGTTGATTCGCAT---CTTGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATC-ATAA--GTA------TTATACgca
blockSeqs : C C AGTTCTAG T A G A T CGAG G GTACT T C C T CA G TTGT T G A A T T C C A TTTTTTTTTT A T T A CCATG T A C T T TTTA TA TAA C AT TT T T A AC G ACGTCAT ATAGGTCCT AA CA G C CT A G AGTTTA GGAT AC G TG AA A TGGCG AGTCC C AGA AGC A G G AG AGC AG A G T GC ATGGGCAAG A GAAAG TA ACTC G G GACT TG TAC T TTGCTAAAGTTTAGGC T G A TGTGAATA T GC TT G T G GATAGGC C A T T C T G G T G G A TT AGG GTT A T A C G A G TATAG A C C CATTATCCTCTATGTGTG AAG T AA CA G A C TA T CA . GAAA A A T ATT C A ACATAGAGATCTCACA T T C T AT GTA T T G TGCTACTGGATACATC A GGCA C T GG A TGA A CTA T G G T A T C AAT CGGA T G A A AA T CT GAGG TCCT TACTAATTGCAACTTTCTCCA C . A CTGTACCTCTGAT G A C G A T AAATA T . T TTCACTG AG AAAATC GT C A GA G A AA AT GG C C ATCAAAA A AC C AT CC G C T G C CT C G C AT A T A TAA G C T C C T C G C T G CCGTA T AC A A A GG CTG GA AA T T GA C
blockSeqs : A C . C . G . C . CG T . . . G C . T A . . . . . . . TC A . C T T TGA . . . TT . C . . A C CCTCTA TTC GC . A C . A . . GGAT A . TG AG . TGGCG ACA A . ACG G . . GT AGC AG A . C G ATGGGCAAG C GAAAG TA A . A GCTT . . G TTGCTAAAGTTTAGGC . G G . T GC . A A G GATAGGC T T T C T T A C T G G A TT AGG . A T A . C T A TATAG . G . CATTATCCTCTATGTGTG G C AA AA A . C . . A . . A . . . . A TTTTAAAGATATTCT A A . A . CGT G T G TACTTCTGA . . . T GA T . . . T G . . . . C . TGT C G A . . . . A . A C . . C C . . . TTTACTT AT AAAA GC C G AT A T GA AC . T . CGAAAAA A . . . C G C G A . T . . . AG . . T . A . A T G . A T . G A . . GT A T C . TGC T AA . A TT A
blockSeqs : . . G . T T . . . . . . . G A . C C C TG . . . T . C . . C T AAAT TCT GA . G C . . . . A A . A A . TACA ACA G . ACG C . . C . . . . T T TGCCT A . . A . A GATT . . A AGTGTC . . C . G . . G A G AA T A T C T T G G . . . G . . . A . . . G G A . . A . GA G C C A A . . . . C . . A . . . . T CCTTGGATTTCTCA T C . . . C . . . ATTTGT . . . . . G . . . . . . . . . . . GG T . . . . . . . CTTAC . . . . T . A C AC AG . C . ATTGAAG . . . . T A T A C . . . . . GG . . A . T . A A C . A C . G A . . A G . . . CT . .
blockSeqs : C . A A . . . . . . . C A . . T G . . . . . . . . . T A ACTA T . . C T . . . . A A . . A . ACAG TT C . AT G . . G . . . . C G TGCTT T . . A . A ATG . . G AGTG . . T . C . . A A G AT T T . G . . C T . . . G . . . G . . . A T A . . A . A . C T G G . . . A . . A . . . . T CTTT T . A TT T . . . . . . . . T . . . . . . . . . TT . . C . . . C C A . G A . A A .
blockSeqs : T . . . . A . . . A . TACA TC T . . C . . . . . . . G A TGCCT T . . . . A A . . C AGTG . . G . G . . A T . AA . T . G . . C T . . . . . . . G . . . A T G . . A . A . . C G . . . . . . . . . CT G . . . . . . . T . . . T G T . . A . C T
blockSeqs : . . . . . . . . . C . TAC TC T . . C . . . . . . . G A C . . . . . A A . . C AGG . . G . G . . A T . . . . T . . . . T . . . . . G
blockSeqs : . C . A C . .
blockSeqCons : T**** T* ACNA*** G** AA******** A* ** CTTTAGATCTC********* C*
originalCons : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT--G-AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACACCATGCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTG-ATA-GCAAGGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCC-T---GGAT-TTCT----AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTG-TGA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
finalCons : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-C----CAACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAATTTT----AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTAT-TTTTTGGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTG-AAAA-AGCNGACNA---GCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CT-GTG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGT-GGG--TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGGGATGGTAA--------GGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------G-AAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGA-AA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCTTTAGATCTC---------AGACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTGC-GA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA
Alignments
lowQualScore : 11111111111111111111111
lowQualScore : 33333333 2222 333333 22 11 2222 1 3333333333 11111 3333 11 111 11 11 11 33333333333 222222222 11 1 111111111 2222 11 11 111111 111111 2222 222 222 11 1 222222222 22222 11 1111 1111 111 55555555555555555 1 22222222 11 1 22222222 111 1 1 1 1 11 222 111 1 1 22222 88888888888888888 222 11 11 1 11 1111 111 88888888888888888888888888 1 2 11 2222 4444444444444444444444444 1 2222 1 111 1 111 1 1 1 1 111 2222 1 11 1 11 2222 2222 00000000000000000000000 1 44444444444444 1 2 22222 2222 33333333 22222222 11 11 111111111 11 11 1 11 111 1 22222 1 11 111 11 55555555
lowQualScore : 1 1 55555555 1 1 1 7 3 8888 1 555555 1 6 6 00 00 1 8888 7 0 6 1 8 1 0 1 8 8 5555555555 8 8 8 0 8 0 8 88888 8 5 3 8 5555 11 6 444 0 8 88 88 11 0 0 3 8 99 99 22222222222 000000000 33 11 1 1 77 1 777777777 7777 00 5 88 777 5 55 333333 888888 2 888 1111 1 5 555 000 55 1 5 1 66 555555555 3 88888 0 55 5555 5 1 0 3333 77 000 1 44444444444444444 0 5 00 1 1 00000000 1 55 77 0 1 1 1 00000000 888 0 0 1 1 7 1 8 7 1 1 3 3 3 3 55 000 000 2 1 1 5 5 1 4 88888 5 3 5 00000000000000000 000 1 44 999 3 6 2 11 8 6 11 4444 3 6 6 111 6 00000000000000000000000000 1 1 0 0 33 9999 9 3 2 7777777777777777777777777 0 1111 0 3 22 4 777 0 777 3 0 2 0 0 0 0 2 777 0 5555 0 2 2 3 5 0 33 0 33 0000 0 8888 0 88888888888888888888888 6 3 7 66666666666666 1 3 6 6 1 1 77777 1 3333 1 0 88888888 55 11111111 0 77 2 1 00 1 1 22 22 11 6 8 777777777 5 11 6 99 00 3 1 3 6 11 44 88 8 6 55 6 6 1 111 3 6 1 1 1 6 5 1 6 1 6 00000 0 0 77 2 9 3 33 000 88 44 7 1 00000000 1
lowQualScore : . . ........ . . . . . .... . ...... . . . .. .. . .... . . . . . . . . . . .......... . . . . . . . ..... . . . . .... .. . ... . . .. .. .. . . . . .. .. ........... ......... .. .. . . .. . ......... .... .. . .. ... . .. ...... ...... . ... .... . . ... ... .. . . . .. ......... . ..... . .. .... . . . .... .. ... . ................. . . .. . . ........ . .. .. . . . . ........ ... . . . . . . . . . . . . . . .. ... ... . . . . . . . ..... . . . ................. ... . .. ... . . . .. . . .. .... . . . ... . .......................... . . . . .. .... . . . ......................... . .... . . .. . ... . ... . . . . . . . . ... . .... . . . . . . .. . .. .... . .... . ....................... . . . .............. . . . . . . ..... . .... . . ........ .. ........ . .. . . .. . . .. .. .. . . ......... . .. . .. .. . . . . .. .. .. . . .. . . . ... . . . . . . . . . . . ..... . . .. . . . .. ... .. .. . . ........ .
lowQualScore : 0 0 00000000 0 0 0 3 7 3333 0 000000 0 7 7 77 33 0 3333 3 0 5 0 0 4 8 0 0 0 0000000000 0 0 0 8 0 8 0 44444 0 0 8 0 4444 00 4 000 8 0 66 88 00 8 8 2 0 00 00 00000000000 444444444 88 00 0 7 99 4 777777777 6666 77 7 88 000 0 00 444444 222222 2 888 0000 0 7 000 000 77 4 7 7 11 999999999 0 66666 4 77 0000 7 4 4 7777 99 000 0 77777777777777777 4 7 66 4 0 77777777 0 77 99 7 4 0 4 77777777 777 7 7 7 0 3 0 0 3 0 0 3 3 3 7 77 000 000 7 4 4 7 3 9 0 66666 7 6 7 00000000000000000 222 0 33 333 7 7 5 00 0 0 00 2222 5 7 7 777 7 22222222222222222222222222 0 2 0 0 88 5555 2 2 5 2222222222222222222222222 0 2222 0 2 88 2 555 0 555 2 2 5 0 0 0 0 5 555 8 2222 2 0 5 2 5 2 88 0 88 8888 7 3333 7 00000000000000000000000 7 3 3 33333333333333 0 3 7 7 0 0 55555 0 5555 0 7 88888888 88 88888888 8 22 5 2 00 4 0 00 22 00 4 0 000000000 6 00 7 22 33 2 0 2 0 44 44 88 0 7 22 7 7 0 777 5 7 0 0 0 7 7 0 7 0 3 00000 0 2 88 0 8 0 88 000 88 00 3 0 33333333 0
consensus : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCA----ACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAA-TTTN---AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTT-GGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTGAAAA-A--GC--NGAC--CATGCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CTG-TG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGTGG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGG-GATG--------GTAA--GGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------GAAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGGCAAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCTTTAGAG----TCTC---A---GACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTGC-GA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
Reference ( family-2531 ) : NNNNNNNNNNNNNCAATCGCCATAACGATTTGGCNGTNTTCGGGCTCGCGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACNGATGTCATNATNTCTAGATGCAGACTCTTCTACAGGGGATATCGGAGTTGACTGCTGATCTACCCGTGTTGAAGGCATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAANTT-T-ACCATCGTCTGTTTTGGTTTCTTTANAGGAAATCTGATTTTCCCCCAGATGT-TACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATTCGGATGACACATCAGTTTCTGANGAATTCTGTATTTCAGTCGG----TTTTTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAGGGTCCTAATTCCNCTTCCAGAA-ATGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCA----ACTTTCCTCACCAAGA-CTCTGTCTCCCACTTCTAA-TTTT---AATATCTC--ACCTTT---AAGTCATATCG-GTCCTTA-TTTTTT-GGTGGCAATC--CTGTTGGCTTCTGATGATGCAA-CTGAAAA-A--GC--NGAC--NA-GCTC-----TCC-TGAAGCT--TTGNAACA--TAAGTG-CTG-TG------GTCTCCG---CTTTCA-GT-TTCC--GG-A-TCCA-TGCCAAGGAATA-C-GTCAATCGGCAG---TC-TCGGA---TGCCA-C-CAAACATNAGAT-AATGTGG-G-TGAAT---CC--TGTGGCATCG-T-TCCTG-GTTGCGTTGTA-TGCCC---GAACNA-----ATGGT--GCAA---TGTAGGAC-TTCCGGCCAGATNT--CT---GNTCAGTTTCC-------AGT----G-CTTGA-CGGCATTCT-AATNAGT--------GTTTGATTAAACCNTT--CAGCA--GAGCCGTTTCCCNTGG-GATG--------GTAA--GGCGTCGTCCTGGTTTTCCTNATTCCTAGCTATTCTGCATAGTTCTTTNA-TGAC-CTTAGAT-TCGAAATTCC--GCCC---TTGG---TCGC-TGT-G-AAGTTTCTCTGGAAAGC-----T-GTAATG-AAG-----------------GAAAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--AGCTT-GGG-AAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACCTCCTTTAGA-----TCTC---A---GACTCAAAAAGTCNATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCG-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT---------TACNTCTGN-------TGC-ACGAG----TCTAC-ATGTTGGTTCGCAT---CTTG-TTCT---ATTCCTGGCCAATAGTAGCGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCCTGGAAAACACTCCGGTAATACTAACTGTCTAACCTGCTGGCC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCGAC----AATT-CAACTTCC--TCCGCTCTCTAA-AATGTCTC-GCACCTCTG-A-GGTTCCCTCCTNGTATTC-TCTTCCCTTGGTC-TAAACCACTTCTCATGATGCTNGTTATCCTGCTTNTAAATAGCNTTTGTCATTNGCTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACGAACACGCTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTGCTGTCAGTAA--AAA--ATTGGTTTCCTTGAAAGACCGTCTGCATCTGCATTCAAATNACCACT--TCTGTACGA-TATATCGAAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCCAGCTTAG-CTTTGC-GA-AT-ATGTACGT-GAANGG-TT-ATTGTCNGTA---ACGACGTG-AAATTGNTTNCCATACAGATAAT-CATGNA-GCTTGTCACATACGGCCCACTTG-----AGA-GCCAAGAACTCTAACTTGTGAGCGGGGTAGTTATTCTC--ACTCGNTCG-TAGACCTCTGCTTGCATAAGCAATTACCCTCTTCTNTCCTTCTTGTT----GGCTTGATATAGTACAGCNCCT
gi|1 : CAATCGTCATAACGATTTGGTAGTATTCGGGCTCGCGTGGACCTTCTAT--------GAATGTTCGGGGAACAGATATCATCATCTCTAGATACAGACTCTTCTACAGGGGATATCAGAGTTGACTGCTG---------TGTTGAAGGCTTATTAGAATTCTGAAAGGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAATA----TAAATT-TTACCTTTGTCTGTTTTGGTTTCTTTACAAGAAATTTGATTTTCTCC---ATGTGTACGTGTAGTTTTCACTCTAAATAAATCCGTGTCTGATCGCTCCGAGTCAGATT------ACACATTAGTTTCTGAAGAATTCTGTATTCCAGTCGG----TTTCTTTTTTCTTGTTGCCTTGGCTACCGGAGGATCTAGTTCACCGGGAGGAATGAAATTAAACGACAGTAGC-ATATTTCGGTGTAAGGTCCTACTTCCTTCTCCAGAA-AAGCTTTTCACCTTGTACACCAGAACTTCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGATTATGTTT-CCCTTTAGTA-CCT----ACTTTCCTCACCAAGA-CTATGTATCCCAC-------TTTG---AATACCTC--ACTTTT---AAGTCATATTG-GTC---A--TTTTT-GGTGGCAATC--CTGTTGGCTTCTGATGGTGCGA-CTGAAAA-A--GCTTACAC--CATGCTT-----TCC-TTAAGCT--TTGCAACA--TAAGTG-CTA-TG------GTCTCCC---TTTTCA-GT-TTTC--GG-A-TCCA-TGCCAAAGAATA-C-ATCAGTTGGCAG---TT-TTGGA---TGCCAGC-CAAACATGAGAT-AATGTGG-G-TAAAT---CC--TGTGGCGTCG-T-TCCTA-GTTGCATTGTA-TGCCT---GAACTA-----ATGGT--GCAA---TGTAGGAC-TTCCGGTTAGATAT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCTTT--CGGCA--GAGCCATTTCCCATGG-GATGGTACATATGTAA--GGTGTTGTCCTGGTTGTCCTAATTCCTAGC-ATTTTGCATGGTTCTTTGA-TGAC-TTTAGAT-TCGAAATTCC--GCCC---TTGT---TTAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTAATG-AAG-----------------GACAA--GTTCTCGTATAGAGCCTTAGCAGT-CGT-A-TGTGCTGTTTGA-TTCCTGCATGGAAT--AGCTT-GGGCAAATCATCTTGT----AAATTGGTCTGTAA-TTACCAA-GACATT---CTT-AAAACCT-CTCTAGAATGT-TCT----A---AACTAAAGAGGTCAATGCAAACTA-ATTCCA-TGG--GTCTTGTCGCA-AGAATTGGTGCAAGTTCTGTTGCAGGCCTGGCTGGAGTTTTGTTACATATACATCTGC-------TGC-ACGAG----TCTAC-ATGTTGGTTCACAT---CGTG-TTCT---ATTCCTGGCCAATAGCAGCGCTGTCTTGCTAGCCAAAGTGTTTTGTCCT-TCCCTGT-GTGTCC-AACATCA-TTATGTATTCCCTCTAAA---GCCACTGGCCT--AAAACACTCTGGTAATACTAACTGTCTAACCTGCTGATC--ATC-ATGA--GTAGAGGTTTTATACAGGAC----ATCGATGTGGAATTCCAACTTCTTGTTTGCTCT-TAACAATTTCT--GCACCTCTGAA-GGTTCCTTCCTAGTATTC-TCTCCCCTTGGTCTTAAACCACTTCTCATGATGCTTATTATCCTGCTTGT-----GCATTTGTCATTGGCTTGTTCTTCCTTCCAATCGTTGACATTTAGTATGTCACATGGTACTAGATCCTCACCAGCCATATGAGGTATTCTATCCACTAACACACTTTGACAACATGGTATGGATATAGAGGCTGCCTGGCACAGATCT-----TG-TGTCAGTAAATAAA--ATTGATTTACTTGAAAGACCGTCTGCATCTGCATTCAAATTACCACT--TCTGTATGA-TATATCACAA--TTATAGCTGGCT--A-GAGCA--GCTA-CCCACCTCTGGCTAGTGGCATCAAGCTTAGACTTTGT-GA-AT-ATGTACGT-GAAAGG-TT-ATTGTCAGTA---ACGACGTG-AAATTGGTTACCATGCAGATAAT-CATGCA-GCTTGTCACTTAACGCCCATTTC-----AAA-GCCAAAACCTCCATCTTAGGAGCAGGGTAATTATTCCC--ACTAGGTCG-TAAACCTTTGCTTACATAGGCAATTACCTTCTTCTGTCCTTCTTGTTCTTAAGCTTGATATAGTACAGCTCCT
gi|10 : ctgtcatgtggtcAACTAAAGGGCAATAGCGATATGTCGGTGTAG--TCCTAATTCCACTTCCAGAA-ATGCTTTTC-CCTTGTACCCCGGCACTTCTGGGTTTGGTATGCTGTGGCA-TGGTATATTTTTTTTTTTACCTTTGAAATCCCATTTTATTCTGCTAGCTTATGTTT-CCCTTTAATATCCT----ACTTTCCGCACCAAGAACTCTGTCTCCCACTTCTAA-TTTTTTAAATAT-TC--ACCTTTTAAAAATCCT-TTG-GTCCTTAATTTTTT-GGAGGCAATC--CTGTTGGCTTCTGATGAT-TAA-ATGAAAACA--GC--GGAA--AT-GCTCATAGGTCCTTAAAGCT--TTGGAACA--TAAGTG-CTG-TG------GTCTCCA---CTTTCACGTGTTCC--GGAA-TCCA-TGCCA--GAATA-C--TTAATCAGCAGAGTCC-TCGGA---TGCCA-
gi|11 : --GA-A-TCCA-AGC--AGGAA-----ATCTATCGGTAG---TT-TAGGAAGATGCC----CAAACATAAGATGAAAGTGG-C-TGTAT---CC--TGTTG--TTG-TGTTTTGCGTTGCGTTGTA-----C---GAA--A-----ATAAT----AACTCTGGAAGATGTTTCGGCCA-ATGTTGCTTACGTTCAGTTGTT-------AGT----GTCTTTA-TGGAAT--T-GATAAGTTGTGAATAGTTCTATTAAATCTTT--CA-CATTGAG-CGTTTCCTTCAG-GATG--------AT
gi|12 : GT-GAATGGATT-GTTGCCAGCA---ATGGT-TGCAAATTGTTTCTAATCC---TAATTCCTGGA-ATTCTTCCCATATGGCCCATTTGCCGTAAAATGCAAGGAATTTTTA-TTGTGAGCAGGGTAAATATTCTC--ACTC-TTCGATAGACTTCTGGTTACAT--GCAA
gi|13 : catttGGGATTAAGCTT-GTG-AGA--GTCTTGTGAAAAAAATAGTCGTTAA-TAACCCA-TATATTATTCTC-TAATCCACACATAGAGA---TCTC---ACAAGACTCAGAAAATCTATcaact
gi|14 : caTATGGATTGTTATATCCATGAACATGATTTGTCCACATGTTATGGATACAAAGGGTGTCTGACACAGAGCTCT---TACTGTC--TA----------TG--------GAAA---------CATCTGCAATCAAACAACCATT--CCTGTACGA-TAT--------------GCTGGCT--A-GTGCA--ACTA--CCACCTCTtgccttggatgtgtagtttcactgggacacatttgtctggactctaggcgacag
gi|15 : -GGGCC--GCCA-CCCATCTCTGGCTTGTAGCATCCATCTTGG-CTTTG--GACATGATATACGTCGAAGGA-TT-ATTATCTGTT---ACGACGCG-AAACTGATTTCCGTAGAGATAAT-CATGTA-GTTTGTCACACACAGCCCACTTG-----
gi|2 : CAATCGCCATAACGATTTGGCCGTCTTCGGGCTCGTGTGGACCTTCTACAGTTCTAGGAATGTTCGGGGAACTGATGTCATAATGTCTAGATGCAGACTCTTCTACAGGAGATATCGGAGTTGACTGCTGATCTACCTGTGTTGAAGGCATACTAGCATTCTGAAAAGAAGCAGAAATGCTTGGGCTAATAGAATGAGAAACACGAGTAAGTT------ATCGTCTGTTTTGGTTTCTTTATAGGAAATCTGATTTT-CCCCAGATGT-TACGTACAGTTTTCACTCAAAATAAATCCGTGTCTGATCGCTACGAGTCAGATTCAGATGACACATCAGTTTCTGAGGAATTCTGTATTTGAGTTGGTTGTTTTTTTTTTTCTTGTTGCCTTGGCTACAGGAGGATCTACTTCACC
gi|2 : acggccatgCCTAACTCCCCTTCCAGAA-ATACTTTTCACCCTGTACACCGGAACATCTGGGTTTGGTATGCTGTGG-A-TGGTATAT----------ACCTCTGAA-TCCCATTC-AT-CTGCTAGCTTATGTTT-CCCTTTAATA-CCATGCAACTTTCCTTACCAAGA-CTCTATCTCCCACTTCTAA-TTTTGA-AATATCCC--AC-TTT---AAGTCATATTGCGTCCTTA-TTTTTTTGGTGGCAATC--CT-TTGGCTTCTGATGATG--A-CTGAAAA-AA-GC--CGAC--TA-GCTC-----T-------GCT--TGGAGACACTTAATTG-CTGGTG------GTCTCCA---CTTTCA-GT-GTTC--GG-AGTCCA-TGC-AAGGAATA-C-ATCAATTGGTAG---TC-TC---------------AAACATGAGAT-AATGTGG-GGTAAAT---CC--CGTGGCCTCA-T-TCCTG-GTTGCATTGTG-TGCCT---GAACAA-----GTGTT--GCAA---TGTAGGAC-TTCCAGTCAGACTT--CT---GGTCAGTTTCC-------AGT----G--TCGA-CAACATTCT-AATGAGT--------GTTTGGTAAAACCTCT--CAGCA--GAGTAATTTCCCATGG-GATG--------GTAA--GGCGTTGCCCTGGTTTTCCTAATTTCTAGC-ATGCTGCATAGTTCTTTGA-TGAC-TTTAGAT-TCAAAATTCC--GCCC---TTGG---TCAC-TGT-G-AAGTTTCTCAGGAAAGC-----T-GTACTG-AAG-----------------GAAAAA-GTTCTCGTATAGAGCCTTAGTAGT-CGT-A-TGCGCTGTTTGA-TTCCTGCATGGGAT--GGCTT-GGG-CAA--ATCTTGT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTC-AAAACT---------------------A---AAGTCAAGAAATCAATGTAAACTA-ATTCCA-TAG--GTCTTGTCGTA-AGAATTGGTACAAGTTCTGCTGCAGGCCTGACTGGAGTTT------------ATTTGT-------TGT-ACGAG----CCTAC-ATGCTGGTTAACAT---CTTG-TTCT---ATTCCTGGCCAATGATAACGCTGTCTTGCTAGCCAAAGTGTCTTGTCCT-TCCCTGG-GTGTCC-AACATCA-TTGTGTATTCCCTCTAAA---GCCACTGTCC--GGAAACACTCTGGTAATACTAACTGTTTAACCTGCTGGTC--ATC-ATGA--GTAGAGGTTTTATACGAGAC----ATCANC----A-------------------CCTCTGA-A--GTTTC------------------CCTCCTGGTATTT-CCTTCCCTTGGTCGTAAACCACTTCTCATGATGCTAGTTATCCTGCTTTTAAATAGCTTTT----TTTACTTGTTCTTCCTTCCAATCGTTGACATCTAGTGTGTCACATGGTACTAGATCCTCACCAGCCATATAAGGTAATCAATCCACGAACACACTTTGACAACATGGTATGGATACAGAGGCTGCCTGGCACAGAGCTTTCACTG-TGTCAGTAA--AAA--ATAGGTTTCCTTGAGAGACCGTCTGCATCTGCATTCAATTGACCACT--TCCGTATGA-TATATCAAAA--TTATAGGTGGCTACA-GAGCA--GCTACCCCACCTCTGGCTAGTGGCATCCAGCTTAGCCTTTGT-GA-AT-ATGTACGT-GAGGGG-TT-ATTGTCAGTA---ACGACATG-AAATTGATTACCAAACAGATATC-CATGCA-GCTTGTCACATACAACCCATTtaactccccttccagaaatacttttcaccctgtacaccggaacatctgggtttggtatgctgtggatggtatatacctctgaatcccattcatctgctagcttatgtttccctttaataccatgcaactttccttaccaagactctatctcccacttctaattttgaaatatcccactttaagtcatattgcgtccttatttttttggtggcaatcctttggcttctgatgatgactgaaaaaagccgactagctctgcttggagacacttaattgctggtggtctccactttcagtgttcggagtccatgcaaggaatacatcaattggtagtctcaaacatgagataatgtggggtaaatcccgtggcctcattcctggttgcattgtgtgcctgaacaagtgttgcaatgtaggacttccagtcagacttctggtcagtttccagtgtcgacaacattctaatgagtgtttggtaaaacctctcagcagagtaatttcccatgggatggtaaggcgttgccctggttttcctaatttctagcatgctgcatagttctttgatgactttagattcaaaattccgcccttggtcactgtgaagtttctcaggaaagctgtactgaaggaaaaagttctcgtatagagccttagtagtcgtatgcgctgtttgattcctgcatgggatggcttgggcaaatcttgtaaaatggtctgtaattaccaagacattctcaaaactaaagtcaagaaatcaatgtaaactaattccataggtcttgtcgtaagaattggtacaagttctgctgcaggcctgactggagtttatttgttgtacgagcctacatgctggttaacatcttgttctattcctggccaatgataacgctgtcttgctagccaaagtgtcttgtccttccctgggtgtccaacatcattgtgtattccctctaaagccactgtccggaaacactctggtaatactaactgtttaacctgctggtcatcatgagtagaggttttatacgagacatcancacctctgaagtttccctcctggtatttccttcccttggtcgtaaaccacttctcatgatgctagttatcctgcttttaaatagctttttttacttgttcttccttccaatcgttgacatctagtgtgtcacatggtactagatcctcaccagccatataaggtaatcaatccacgaacacactttgacaacatggtatggatacagaggctgcctggcacagagctttcactgtgtcagtaaaaaataggtttccttgagagaccgtctgcatctgcattcaattgaccacttccgtatgatatatcaaaattataggtggctacagagcagctaccccacctctggctagtggcatccagcttagcctttgtgaatatgtacgtgaggggttattgtcagtaacgacatgaaattgattaccaaacagatatccatgcagcttgtcacatacaacccatt
gi|3 : acggccatgcaatcgccataacgatttggccgtcttcgggctcgtgtggaccttctacagttctaggaatgttcggggaactgatgtcataatgtctagatgcagactcttctacaggagatatcggagttgactgctgatctacctgtgttgaaggcatactagcattctgaaaagaagcagaaatgcttgggctaatagaatgagaaacacgagtaagttatcgtctgttttggtttctttataggaaatctgattttccccagatgttacgtacagttttcactcaaaataaatccgtgtctgatcgctacgagtcagattcagatgacacatcagtttctgaggaattctgtatttgagttggttgtttttttttttcttgttgccttggctacaggaggatctacttcaAATAGC-ATATTTCTATGCAGAGTCCGTATTTTGCCTCCAGCCTCTCCTTTCCAC-TTGTATACAGGTAGTCCTAGTCTT----TGCTGCAA-AACCAAATAA----------ATCTCCTCA-TCC-ATTT-TT-CAGCTAATTTGTTCTTATCCTTCAA-A-GCA----ACATTTCTCACCAAAA-CTCGAT-TCCTGCCTCTAA-CTT----AACATCTTTAACCTTG---GCATCATACCT-GTTCTTG-TTCTT--GTTCGCCATTTTCTGC-GACT-CTGCTGTAGCAATCTTATGC-ACTGC--CT-C--TA-ACTC-----TTC-TGCAATTCATTGGAA----TAACCA-CTG-TGAGTTTAGTCTTC-----TTTCA----TTCCA-GG-A-TCCAATCCTAAAAAA-A-CAGTCTATCGGGAG----C-TGGGA---TTCCA-T-CCGACATCAGAT-AGTGTGGAG-CATAT---CC--TGTTGCATCA-C-TCTTT-GTAGCGTTGTA-TGCTT---GAACCA-----ATGGA--GCAA---CGTATGAT-ATCCAATCGGCTTT--CT---GATCATTTTCC-------AG-----G---TAATCAGCAACTT-GATCAGT--------GTTTTGTTGAAACGTT--CAGCA--GATCCGTTCCCCATAG-GATG--------GTAT--GGTGTTG-CCTCGTTTTCTTTATACCTA-CCACTTTACATAACTCTTTCA-AGAC-CTTCGAT-TT--AGTTTC--TACC---TTGG---TCAC-TGT-ACAACTTTTTCTGGAAA-------T-ATAGTGCAAG-----------------AAGAA--GTTTTCATAGAGGGCTTTAG-AGT-TGTCA-T-CGCTGTCTGA-TTCCTGCAGGGAAT--AGCTT-GTG-AGA--ATCTAGT-----GAATGATCGGTTA-TGATCAA-AATA-T---CTC-ATACCCACCCTTGGA-----TTTCTCAA---GACTCAAAAAGTATATACACACAA-ATTCCATTGGATGTGTTGTT-C----AATGGGAAACAGTTCTGCTGTCGGCTTGACAGGTGTCT---------TACTTCTGA-------TGCAACGAGGGCATTTTC-A-ATT--TTCTCATTGATTTC-TTCTCTAATTAAAGGCCAGAAGTACCTCTACCTTGCCA-CCACAGAGTTTTCTCCT-TTCCCGG-GTGACC-TGTATCT-CTATGGATAC---CTAAAAATACCACTTCCCTGT---ATACTTCA--AGTTTT--TTTTCT---CTTCTCTCC--ATCTATAACTGTA---ATTATATACAAAACTCCTTTCAACTACTAATTGCAACTTTC--TCCACTCTCTAA-AATGTCTCTGTACCTCTG-ATGGTTCTCTCTTCATGTTCATCTT-ATGTGGTC-TAAATC
gi|3 : aaaaaaccagaatatggTGACAAATGGCTTTTACT-TTCTCATTGA--AAATCACTGGCTTCCTTGATAATCCATCTGTATCTCCATTCATCTACCCAGA--TCTATACGA-GAT--CGAAAAATCATAACTGGCT--A-AAGCA--TCTA-TCCATCTATG-------------AG---AG-C---AC-G---T-ATGTAAGT-G---GA-TT-GTTGTCCGTG---ACTACTTG-GAATTGCGTCTCATAAAGATAAT-CGTGAA-ACTTATCACAAACAGACCACTTA-----AGA-GCTAAGAACTCTAACTTGTGAGCAGGATAG---TTCTC--ACCCTGTCT-TAGACCTCTGCTGGCATAAGCAATTACTCTCTTCTTTCCTTCCTG------GATTTGATATAGAATTGCCCCTctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagtttgacaaatggcttttactttctcattgaaaatcactggcttccttgataatccatctgtatctccattcatctacccagatctatacgagatcgaaaaatcataactggctaaagcatctatccatctatgagagcacgtatgtaagtggattgttgtccgtgactacttggaattgcgtctcataaagataatcgtgaaacttatcacaaacagaccacttaagagctaagaactctaacttgtgagcaggatagttctcaccctgtcttagacctctgctggcataagcaattactctcttctttccttcctggatttgatatagaattgcccctaatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : aaaaaaccagaatatggaatagcatatttctatgcagagtccgtattttgcctccagcctctcctttccacttgtatacaggtagtcctagtctttgctgcaaaaccaaataaatctcctcatccatttttcagctaatttgttcttatccttcaaagcaacatttctcaccaaaactcgattcctgcctctaacttaacatctttaaccttggcatcatacctgttcttgttcttgttcgccattttctgcgactctgctgtagcaatcttatgcactgcctctaactcttctgcaattcattggaataaccactgtgagtttagtcttctttcattccaggatccaatcctaaaaaaacagtctatcgggagctgggattccatccgacatcagatagtgtggagcatatcctgttgcatcactctttgtagcgttgtatgcttgaaccaatggagcaacgtatgatatccaatcggctttctgatcattttccaggtaatcagcaacttgatcagtgttttgttgaaacgttcagcagatccgttccccataggatggtatggtgttgcctcgttttctttatacctaccactttacataactctttcaagaccttcgatttagtttctaccttggtcactgtacaactttttctggaaatatagtgcaagaagaagttttcatagagggctttagagttgtcatcgctgtctgattcctgcagggaatagcttgtgagaatctagtgaatgatcggttatgatcaaaatatctcatacccacccttggatttctcaagactcaaaaagtatatacacacaaattccattggatgtgttgttcaatgggaaacagttctgctgtcggcttgacaggtgtcttacttctgatgcaacgagggcattttcaattttctcattgatttcttctctaattaaaggccagaagtacctctaccttgccaccacagagttttctcctttcccgggtgacctgtatctctatggatacctaaaaataccacttccctgtatacttcaagttttttttctcttctctccatctataactgtaattatatacaaaactcctttcaactactaattgcaactttctccactctctaaaatgtctctgtacctctgatggttctctcttcatgttcatcttatgtggtctaaatcctgtgttcttcagcccaatcactctactaagtgttttatccttgagttgctcaactcgccaatccacttgactgcaaagaatggggtcctccgattccatgccgcccgtacatggaatagattctgccgctaaactgataaagtgtggcaaggaacacgtcatagttTATCGGAGTTGACTGCTGATCTACCCGTGTTGAAAGAATACTAGAATTCTGAAAAGAAGCAGAAATGTTTGGATTAGTAGAATGAGAAACA----TAACGTGT-ACTATCATCTGCTTTGGTTTCTTTAGAGGAAATCAGATTTTCCCTCAGATGT--ACGTGTAGTTTTCACTCTGAATAAATTCGTGTCTGATCGCTCCGAGTAAGATTCGGATGACACATCAGTTTCTGATGAATTATGTATTTCAGTCGA----TTTT-TTTTTCTTTTTGCCTTGGCTACCGGAGGATCTAGTTCACTGGGAGGAATGAAATTAAAGGACAGTAGC-ATATTTCGGTGTAAGGTCCTAATTCCCCTTCCAGAA-AAGCTTTTCACCTTGTACACCGGAACTTCTGGGTTTGGTATGCTGTGC-A-TGGTATAT----------ACCTCTGAA-TCCCATTT-AT-CTGCTAGCT--TGTTT-CCTTTTAATA-CCA----ACTTTCCTCACCAAAA-CTCTGTCTCCCACTTCTAAGTTTG---AATACCTC--ACTTTT---AAGTCATATCA-TTCCTTA--TTTTT-GGTGACAATC--CTGTTGGCTTCTGATGATGCAA-CTGAAAT-A--GC--AGACGTCATGCGT-----TCT-TGAAGCT--TTGCAACA--TAAGTG-CTG-TG------GTCT-CA---CTTTCA-GT-GTTC--GG-A-TCCA-AGCCAAAGAATA-C-ATCAATTGACAG---TC-TCGGA---TGCCAGC-CAAACTTGAGAT-AATGTGG-GTTAAAT---CC--TATGGCATCG-T-TCCTG-GTTGCATTTTG-TGCCT---GAACAA-----GTGGT--GCAA---TGTAGGAC-TTCCAGTAAGATTT--CT---GGTCAGTTTCC-------AGT----G--TTGA-CAACATTCT-AATTAGT--------GTTTGATTAAACCCCA--CAGCA--GAGCCATTTCCCATGG-GATG--------GTAA--GGCGTTGTCCTGGTTTTCCTAATTCCTAGC-ATTTTGCATAGTTCTTGGA-TGAC-TTCAGAT-TCAAAATTCC--ACCC---TTGG---TCAC-CGT-G-AAGTTTCTCGGGAAAAC-----T-GTAATG-AAG-----------------AAAAA--aatcctgtactgctagcatctgtaagtaaaacaaatggtaatttgtaatttgcatacccaagaataggggg
gi|4 : GT----AAAATGGTCTGTAA-TTACCAA-GACATT---CTA-AAAACCTCCTTT---------------A---GACTCAAAAGGTCTATGGAAAaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaaaatggtctgtaattaccaagacattctaaaaacctcctttagactcaaaaggtctatggaaa
gi|5 : tatcggagttgactgctgatctacccgtgttgaaagaatactagaattctgaaaagaagcagaaatgtttggattagtagaatgagaaacataacgtgtactatcatctgctttggtttctttagaggaaatcagattttccctcagatgtacgtgtagttttcactctgaataaattcgtgtctgatcgctccgagtaagattcggatgacacatcagtttctgatgaattatgtatttcagtcgatttttttttctttttgccttggctaccggaggatctagttcactgggaggaatgaaattaaaggacagtagcatatttcggtgtaaggtcctaattccccttccagaaaagcttttcaccttgtacaccggaacttctgggtttggtatgctgtgcatggtatatacctctgaatcccatttatctgctagcttgtttccttttaataccaactttcctcaccaaaactctgtctcccacttctaagtttgaatacctcacttttaagtcatatcattccttatttttggtgacaatcctgttggcttctgatgatgcaactgaaatagcagacgtcatgcgttcttgaagctttgcaacataagtgctgtggtctcactttcagtgttcggatccaagccaaagaatacatcaattgacagtctcggatgccagccaaacttgagataatgtgggttaaatcctatggcatcgttcctggttgcattttgtgcctgaacaagtggtgcaatgtaggacttccagtaagatttctggtcagtttccagtgttgacaacattctaattagtgtttgattaaaccccacagcagagccatttcccatgggatggtaaggcgttgtcctggttttcctaattcctagcattttgcatagttcttggatgacttcagattcaaaattccacccttggtcaccgtgaagtttctcgggaaaactgtaatgaagaaaaaaggtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCATCCGCGTGAGCATT-GAATTTCC-TTGGTCGGTA-GACTATATTGAAG--TTAT---TGGAT--ACAAGCAATGAAA-TCCATTGGTGACCAGTGGCATCTAACTTCG-CTGTACTGA-GT-GCATACGT-CATTGG-TTTATTGTCTGTATAAACAAC----AACGGGTTTGTCCTGTAAATAAT-C-CGAACATTTCTCGGTTATTGACCACTTG-----GGA-GCCAAAAACTCTAGTTTATGGGTGGGGTAGTTCTTCTCGGATTTGCTC---AATTCCCTGCTTGCATAAGCAATTACCCTGT-CTAACCTGTTTGTT------CCTGGTACAGTACAGCACC
gi|6 : aatATA--TAAGTGACTG-AT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGTGG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAGTGGTG--------ATAGGCGGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTGAAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGcagttctgtctggcacgcatccgtatgaagcttaaatggcttgctgaaatccgggtaggccaatacagggggtgatgtaagtctgttccttagctcatcaaaagcatcttgttggttttagtcccagtgtcacttaggatctactttgggtttggcattgctccgtagttccttaccaactgccataatgtcaatgagtggtctggctatcttggtgaaattgtggatacattttcgacaatatccagcgaatcctacgaactgtttcacttgctcagagttggttggtgtaggccagttctttaccttgctgagcttgtctggatatggttcaactccctcctttgaaacaatgtgttcaacatacttgaccct
gi|7 : ATA--TAAGTGACTG-AT------GTCCCTGGATCCTTC--GT-TTCCTGGG-C-TCTA-TTCCTAGAAATGGC-GTCAACTGACAA---ACATTGGG---TGCAA-CGCAAACATCAGAA-AATGTGG---TGAATAGCCCAGTTTGGCATCAAT-TCGTA-ACTGAGTTATAATGGGCAAGGGACTAGAAAGATGATTAGCA------TAGAAT-TTCAATCTA---AT--TT---GCTCTATTTTCTTGCTAAAGTTTAGG-CTTAA-TGGCATTTTGAATGAGA--------GTTTGATTAAACCGTTGCTAGCC--GATCCATTGCCTTTAGTGGTG--------ATAGGCGGTGTCGTTCTGGATTTCTTTA-TGTTGGCTATCCAACA-ACTTCTTTTATTGACGCTTGGCTGTCGAAATTCCTTGCGCAGGGTGG---TCGCTTATAG-CAATATATCTGGAAAACTATAGT-ATAATG-AAGCATTATCCTCTATGTGTGAAAA---TTTTCATATAAAGCTTTAGCTGTAAGT-G-TATGCTAGTTGA-TTTTTGgca
gi|8 : CC--GCCC---CTAGGTTTCTC-TAT-G-AA-TTTCTCTGGAAAGC-----CAGTA-TG-AAG-----------------GAAAAAAGTTCTCGTATAGAACCTTAGCAGT-CAT-AATGCGCTGTTTGAATTCCTG-ATGGGAT--GGCTTTGGGCAAA--ATCTTGT----AAA-TGGT-TGTAAATTACCAGTGACATT---CTCCAAAACCTCTTTTAAAGATATTCTT---A----ACTCAAAAAGTCGATGCAACTCACATTCCAATGG--GTCTTGTC-CGTAGAAT-GGTACAAGT-CTGCT-CAGGCCTGACTGGAGTTT---------TGCTACTGGATACATCTGC-ACGGG----TCTACCATGTTGATTCGCAT---CTTGATTCT---AT-CCTGGCCAATAGTAGTGTTGTCTTGTTAGCCAAAGTGTCTTGTCCTGTCCCTGGTGGGTCCAAACATCATTTGTGTATTCCCTCTAAA---GCCACTGTTCCGGAAAAAAATCTGGTAATACTAACTGTCT-ACCTGCTGGCCAAATC-ATAA--GTA------TTATACgca
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCCATGAGTTGTGACAAGGGTCTGTCAATCTTGCCGAAGTTGGTATCTCAATAAATCTTTGCTAATGAGTCATGACTAGAATATCCTTAAAAATTCCAGACCTTCTCGTTTGTTGTACGGGTTGACCAGTTCAGCACTTTGCTGGTCTTGTCTGGATTCGTCTCCATACCCTGGTCCGATACTATGTGTCTTCAATGTTTGACACGGCTCTGTAAAAATGTGCAGTTCTTTCGTGAAAGATTTGATCCACTTGCTAAGGTCGTTGGAGATGCTCCTATATAATTCTGGAGAAAATAATGTCATTCAGAGAAATAAAAAAGATGCTGAGGTACAATTCCCCTAGATCTAGTTCTAGTCGTTGGACAGTATGTATAGGTGAGCTGTTGGATAATCTAAATAATATCCGGTTATATTAAAAAATCCTATAGAGGACCAACAGCAAAAGTTGTTCTTTGCGTTTGTTCCTCGCCTATCT
Unaligned ( gi|16 ): CATTCATCATTCGTCATTCCATAGAAAACTTCCTCAACTAATTGTGACTTTTCCCATTCTCTGAGTGAAGGTCAGATTGTTCTTCTCTCGTGTTTCCTTTAGTGTTGTCTAAATTCTGCATCCTTCA