lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 222222 1 1 6666666666666666666666 1 11 1111 11111 11 11 111 11 11 77777777777777777777777777777777777777 333333333 222222 4444444 222 2222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 2222 11 22 1 1 1 111 2222 1 2 11 2 333 2 4 1 222 5555 1 2 333333 1 22 2 2 4 2 2222 2 1111111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 2222 1111 3333333333 1 444444 444444444444 444 66666666666666666 222 1 1 333333 1 1 444444444444 11 333333333 4 333333 1 6666666 4 1 666 333 22 66666666666666666666666666 2 1 22 2 2 2 55555 333333333 11 1 1 444444444 1 6666666 1 11 222222 1 1 1 1 1 1 1 11 22 777777777777777777 22 1 111 33333 1 11 1 111111111111111111111111111111111111111111111111111111111111 2222 1 3333 1 2 1 3333333333 1 1111111 11 1 2222 4444 11 1 1 11 666666666666 1 9999999999999999999999999999999999999999999999999999999999999999999999999999999 11 1 22222 1 1 4444444 11 1 11 1111 77777777777777 2222 11 1 1 11 1111111 1 11 111 11 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 2 1 222 99999999999 1 1 4444 11 1 4444444 22 333333333333 3333 1 1 1 33 1 444444 3333333 1 33333 1 555555555 1 1 44444444444 3333333333 111 1 1 5555555555555555555555555555 1 555555555555555555555555 1 333 22222 1 1 55555555555555555555555555555555555555555555555555555555 1 22 111 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 2 11 1 11 2222 1111 1 22222222222222 2222222222 11111 44444444444444 111 11 22 1111111111 88888888888888888888888888888888888888 111 111 22222 33333333 11111
lowQualScore : 6 666666 3 3 1111111111111111111111 0 11 7777 8 88888 1 11 8 8 8 8 77 8 88 111 11 22 00 77777777777777777777777777777777777777 666666666 222222 4 1111111 333 9999 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 7 2222 88 6 00 3 5 2 777 2222 3 0 88 0 888 0 0 5 111 0000 5 0 2 000000 5 55 2 4 0 0 0 0 4444 0 8888888 7 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 7 8888 9999 7 8888888888 3 7 222222 555555555555 7 7 111 00000000000000000 333 3 3 111111 3 5 888888888888 99 333333333 0 444444 5 8888888 4 0 6 5 222 555 44 77777777777777777777777777 4 4 0 2 5 4 77 2 55 8 0 0 4 00000 6 666666666 6 88 3 3 444444444 3 1111111 3 6 6 44 999999 2 5 0 2 3 0 0 0 88 00 666666666666666666 88 3 777 33333 6 0 33 0 555555555555555555555555555555555555555555555555555555555555 55 1111 33 0 8888 0 0 0 5555555555 0 7777777 2 33 0 0000 2222 3 33 0 0 33 2 6 7 444444444444 6 4 3 9999999999999999999999999999999999999999999999999999999999999999999999999999999 88 3 77777 3 3 1111111 88 3 88 8888 88888888888888 1111 22 0 0 33 8888888 0 3 33 111 33 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 0 6 3 6 333 11111111111 3 3 7 6666 88 7 2 7777777 00 7 7 666666666666 7 5555 3 3 3 11 6 3 333333 6666666 3 33333 3 333333333 3 3 77777777777 2222222222 6 777 3 77 3 3 7777777777777777777777777777 3 999999999999999999999999 3 666 77777 0 0 11111111111111111111111111111111111111111111111111111111 3 00 888 1 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 8 6 8 8 8 8 8 8 88 99 6 33 4444 2222 99 99 6 11111111111111 99 9999999999 6 6 66666 55555555555555 111 5 11 77 11 5 888 555 5 0 7777777777 5 44444444444444444444444444444444444444 777 3 000 99 5 5 55555 88 55555555 22 77777 77 5 5 5
lowQualScore : . ...... . . ...................... . .. .... . ..... . .. . . . . .. . .. ... .. .. .. ...................................... ......... ...... . ....... ... .... ................................................................................................................................... . . .... .. . .. . . . ... .... . . .. . ... . . . ... .... . . . ...... . .. . . . . . . .... . ....... . ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... . .... .... . .......... . . ...... ............ . . ... ................. ... . . ...... . . ............ .. ......... . ...... . ....... . . . . ... ... .. .......................... . . . . . . .. . .. . . . . ..... . ......... . .. . . ......... . ....... . . . .. ...... . . . . . . . . .. .. .................. .. . ... ..... . . .. . ............................................................ .. .... .. . .... . . . .......... . ....... . .. . .... .... . .. . . .. . . . ............ . . . ............................................................................... .. . ..... . . ....... .. . .. .... .............. .... .. . . .. ....... . . .. ... .. ............................................................................................................................................ . . . . . ... ........... . . . .... .. . . ....... .. . . ............ . .... . . . .. . . ...... ....... . ..... . ......... . . ........... .......... . ... . .. . . ............................ . ........................ . ... ..... . . ........................................................ . .. ... . ................................................................................................. . . . . . . . . .. .. . .. .... .... .. .. . .............. .. .......... . . ..... .............. ... . .. .. .. . ... ... . . .......... . ...................................... ... . ... .. . . ..... .. ........ .. ..... .. . . .
lowQualScore : 0 000000 3 3 8888888888888888888888 0 00 0000 0 00000 8 66 0 0 0 0 44 0 66 888 88 22 22 77777777777777777777777777777777777777 555555555 000000 0 3333333 333 3333 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 7 3 7777 33 7 77 3 0 0 777 7777 3 0 55 0 555 0 0 5 555 5555 5 0 5 000000 0 55 5 0 0 0 0 0 0000 0 7777777 3 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3 3333 7777 3 7777777777 3 3 000000 000000000000 3 3 777 33333333333333333 333 3 3 777777 3 0 333333333333 00 555555555 0 555555 0 0000000 0 0 0 5 555 000 00 55555555555555555555555555 0 0 0 5 5 0 55 5 55 5 0 0 0 00000 0 555555555 0 33 3 3 777777777 3 0000000 3 7 7 00 222222 5 0 0 8 5 0 0 0 33 00 333333333333333333 77 3 777 33333 7 0 22 0 555555555555555555555555555555555555555555555555555555555555 00 2222 55 0 8888 0 0 0 5555555555 0 8888888 0 88 0 0000 0000 2 88 8 0 88 5 7 3 333333333333 7 7 3 7777777777777777777777777777777777777777777777777777777777777777777777777777777 33 3 00000 3 3 0000000 33 3 33 7777 00000000000000 7777 55 0 0 22 0000000 0 2 88 000 88 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 7 0 0 3 7 333 77777777777 3 3 3 7777 33 3 3 0000000 77 3 3 333333333333 3 0000 3 3 3 77 7 3 000000 7777777 3 33333 3 333333333 3 3 22222222222 8888888888 0 555 7 33 3 3 7777777777777777777777777777 3 333333333333333333333333 3 777 88888 0 0 33333333333333333333333333333333333333333333333333333333 3 77 000 0 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 0 0 2 0 0 0 0 0 88 00 0 66 8888 5555 22 22 2 88888888888888 22 2222222222 7 7 77777 55555555555555 777 0 99 99 44 7 666 999 7 1 6666666666 7 44444444444444444444444444444444444444 999 6 000 77 7 0 33333 11 77777777 11 33333 99 0 7 7
consensus : TAGAGAAAA-TA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-T----TAGA-NT-TGC-AT-TAA-AC-G-G-AA--AGTTTTNCATT-GAA-CAG--CCTTGA-------AG----GGNATTTGA----TTCCTCAAAAGTTTCCAAAGGAGACA-TG-TTTTNCTTGAGAATT---NA--AATA---GCA-GTGTTTCAAAN---------A---TAA-----TGCTA--TTTT----AATGCC----A-CT-G-AA-AAGGGCG-TTA-----TTG--AAACT-T-TAT-A-AATT----AAATG-C-------TAC-GAC-GACACGGT-TGAAAAAAACAGTT-A--TTT--CAGAA-ACATTT-AAT-CTTCTTA-T-AAGTTGT--A-TTCAAA-TGTTACAAATATNGCAATTAAAAAAAGATGCAT-TCATTTTCAAGAAATAAATTTACTTTTGTTTCAAATGNCCATATANNTATCCCGCATCTGTTTGGCGATGNCCAATTNAGGGACAAGCAAATTCAATGTTTAATTTAAGTTGTTAACCTTTGCATATGC-CC-TTCATCA----------AAA--TG-A-A-T-NTAAG-GCAAAT---T--AATTT-AAATGCAAAGNTTGTGGCAAATTGANTTAAATGAAAAATTAATCGNCAAACCAAAAAGCTATCACAAACACGTTTCACCAAACTTTTTCTTGAATATTT--AATAAAAATAATCTACAGCTGAAGCAATTTTAATTCAAACTAACACCGNTATAGCNNANCAACCCAACNCCATCTAAAAAACAAACATGT-CTTCATTATACTGATTTTTAAATTTTTATGCTTCGTTGAGATTTAAATTAACTCCACTNATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGNGAAGAATTNAAATCAATCACAAGANTTNTNANTAGAACTATTTGACTTTTTCTCTNTG-GTAATTCTTCCTTGAANTCATATAACAGTCTTTATANATAGGAACCTNGGTAAAGAAAACACAAACAANAAAAAAAANNNTTNATTATTTTCTTCCCGCCGGNTATATGAAAGGGANTTTTTCCCCAAATGAGGTATTNTTTCACCNCNTAATATG----TCATCT-AG-TATACT--AA------AA-TTAATAA-TAG--TCACTTT--G-GATGTC--AACATGCTTGAAA---TCCAATGTC-T--AAA-----TTAC-CACTGG---AC-AATGC-AATCA-G----ACGACT-GAT-GCAACCTA------ATT---AACTTGANGCAAGGCCGCCGGGGACCCCTT-CATTTAANTTCTCTTGTTTTACTTTTAAAANAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTTATCCTTTAATCAAAAAATTCATCCAATTGATCNTGAT-ATAAAAATACTTTTCTTGGTTTTAATATGCTNANTAATAACCACNTTAGANTTTAATTTAANTTNNATTATTCATAAGCAGGTCNTTAATAAAAACTTTACGGTTAATNCTTTAAAGCGCTGTAATGATCGGG--TTC-GTA-TT-A---GC--ATC-GGGTTC-CA--A-GCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGNGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTT--GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---A----TCCGGTCGGACGNGNAGNGANNACCGNTNCGNNNCGCG--------------TGTACGA----TATTCGAA-GGGAG--TT-GA-TGCC-GATTA----AAACAGT-GAG-T-G-NTTAATTTTTTC--TA-GTGCGAA--TNATTT-TTGTTTGA--CTTCCAAAAAG-ATCCGT--GGGCGAAAATTCCTTGGA-TA-------TCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TT--CGT-AAT----TA-TTGG---CAATTT--TG----ATA--TTTTA-CAGGAC-AT--TC-TCAC-GA----TT-AC--CAT-ATTCA--GA-AG-AACTGGA------AA--GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTNACAT--GT-N----CTA--TCTGTG-ATCATT-AT--C--TAC--A--ACAGTA-AACC---GTAAA--CAAGA-A-T-GGGA-AA------CTT---A---C-----GCCACTTTTATGAAGTTGAGGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTGA-CCATTACGAGGCAG---AAACAA-C--------CAC-CGTC-TGTGTGAA-C--AATAAATGA--CAGAACAAAAGGAG-TTG---TTGTGGATTGTGAAT-AAATATTTGTGATTG---T--GA--T-GATCGTAG-C-AAGTA-TT-CTAC-GAGT--AGAATTT-TTA-TAG-GAAAATGAAG-----C-AAGTGCCGT-ATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCN-AG-GAGAC-TTNAG-T--AAAAAA---AAAATNCTNNTTT-TTG-AA----GAT--------AT-CGAAAT----TCTCT-TTCC-C-GGG-ATT-ATT--AATGC---AAG-AAAG--GCATTTAATNAAC-AG-TTTG-----TATG-CAT-ATTCGAAT-GC-G-CC----ATAAATTG---CGAT--C-AA-TGT-CTTTTCA-ATGCTATTTAAATGT-TCATTATTA-TGAC---T-CATTTCAATGCC--T-TA-ATGCA-A-CTTCAATGC-T-A-ATT-T-AAA--TG-C-AG-----T---------CTA-AT-GCAAG-TCTAA-T-GC-A-ACTTC-AA-TGGG--ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGC----AA---TAC--TAATG--C----------CT-TTT-AAT-----GC-----CA------GTGTCATG---CTTTT-T-CAA--TG--AAA-CT-G-TC-A-ATT-CAATGTT--T---NTTTTCT-AATGCA-C--GTTC----CC--NTTACA-TTTTTTCAAA-AA---TGTT---ATGGCAATGC-TATTTC-A--ATGCTN-TGA----AT--AAAAATGCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( gi|2 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-T----TAAA-AT-TGC-AT-TAA-AC-G-G-AA--AGTTTTTCATT-GAA-CAG--TCTTGA------TAG----GGCATATGA----TTTCTC---AGTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATT---GA--AATA---GCA-GT-TTTCAAA----------A---TAA-----TGCTA--TTTT----AATGCC----A-TT-G-AA-AAGCGCA-TTA-----TTG--AAACT-TCTA--A-AATT----AAATG-C-------TAC-AAC-G-CACAGTATGAAAAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-T-AAGTTGT--A-TTCAAA-TGTTAC-AATATTGC-ATT-AAAAAAGAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTC-AATGCTTATATATA-AT-CCACATCTGTTTGGTGATGGTCAATTTAA-GAC-AGCAAATTCAATG-TTAA-TTAAGTTGTTAACC-TTGCATATGCACC-TTCATCA----------AAA--TGCAGA-T-TTGAG-GCAAAT---T--AATTT-AAATGCAA---------------GAATTAA------------TCGT--AAC-----AGCTATCA-AAA---G-TTCAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA-T---TCTAAA---C-A-TATGTTCTTCAGT-TATTGA-T----AA-TTTTAT-CT--GTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTA--T---TCT-GAATTCAT-TAA---TC-TTA-AT-TAGGA-CTTTGGTAAAAAA-----------CAA---AAACTTTTTATTATTTTCTT----CTGGG-ATAT---AGAGATTTTTTTTTTCAAT--GGTA-TG-------ACAT-ATATG----TCATCTGAG-TATACT--AA------AA-TTAATAA-TA---TCACTTT--GAGATGTCA-AACATGCTTGAAA---TCCAATGTC-TA-AAA-----TTA--CACTGG---AC-AATGC-AATCA-G----ACAACT-GATGGCAACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT----C--TTAAAATAATTA-TCTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCA---GAT-ATGATGATAAA--TA----TCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAATAT-CATA-GCAGGTCATTAA-----ACTTTGCGGTTAACACTTTAA-GCGCCGTAATGATCGGG--TTC-GTA-TT-A---GC-TATC-GGGTTC-----A-GCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---A----TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------TGTACGA----TATTCGAA-GAG----TT-GA-TGCC-GATT-----AAA--GT-GAG-T-G-TTTAGTTTTTTC--TA-GTGCGAA--TTATTT-TTATTTGA--CTTCTAAAAAG-ATCCGT--GGGCGAAAATTCCTTGG--TA-------TCTCCTTTGGT-GTA-A-TA--GGC-T-------TA-GGTC------TTTATA--TT--CGT-AAT----TA-TTG----CAATTT--T-----ATA--TTTTA-CAGGAC-AT--TC-TCAC-GA----TA-AC--CAT-ATTCA--GA-AGTAACTGGA------AA--GA--TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCA---C----AC--A---GCAACG-----GGTGACAT--GT-A----CTA--TCTGTG-ATCATT-AT--C--TAC--A--A-AGT--AACC---GTAAA--CAAGA-A-T-GGGA-AA------CTT---A---C-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA-----------CAC-CGTC-TGTGTGAA-A--AATAAATGA--CAGAACAAAAAGAG-TTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTG---T--GA--T-GATCGTA--C-AAGTA-TT-CTAC-GAGT--AGAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGT-ATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCT-A--GAGAC-TGGAG-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------AT-CGAAAT----TCTCT-TTCC-C-ACG-ATT-ATT--AATG----AAG-AAA---GCATTTAATT-AC-AG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGAT--C-AA-TGT-CTTTTCA-ATGC-ATTTAAA--T-TCATGATTA-TGA----T-CATTTCAATGCC-GTCTA-ATGCA-A-CTTCAATGC-T-A-ATT-T-AAA--TG-C-AG-----T---------CTA-AT-GCAAGCTCTAA-T-GC-A-ACTTC-AA-TGGG--ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGC----AA---TAC--TAATG--C----------CT-TTT-AAT-----GC-----CA------GTGTCATG---CTTTT-T-AAA--TG--AAA-CT-G-TC-A-ATT-CAATGCT--T---TTTTTCT-AATGCATC--GTTC----CC--TTTACAATTTTTTC----AA---TGTT---ATGTCAATGC-TATTTT-C--ATGCTT-TGA----ATTAAAAAATGCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|6 : TAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-T----TAAA-AT-TGCTAT-TAA-AT-G-GAAA--AGTTT
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACT----TAAATATATGC-AT-TAACAT-GTG-AA--AGTTTTT-ATT-GAAACAG---CTTGA------AAA----TGGAT-TGAATTTTTTCTC---AGTTT-CAAAAGAAA-A-TGATTTTTCTTGAGAATT---GA--AATA---GCA-GT-TTTCAAAC---------A---TAA-----TTCTA--TTTC-----ATGCC----A-CT----A-AAG-GCA-TTAT----TTG--AAACT-T-TATTA-AATT----AAATG-C-------TAC-AAC-GACACA-T-TGAAAAAAACAGTT-ATTTTT--CA-AA-ACATTT-AAT-CTTTCTA-T-TAGTTGT--A-TTCAAATTGTTACAAATATTGCAATT---AAAAGAT-CAT-TCATTTTC-AGAAATA----TACTTTTGTTTCAAATGCTCATATAAT-AT-CCG-ATCTGTTTGGCGATGGTCAATTTAAGGAC-AGCAAATTCAATGTTTAATTTAAGTTGTTAACC-TTGCATA-----C-TTCCTCATACTTAGGATAAA--TG-ATA-TAATAAT-GCACCT---T--CATCA-AAATGCAAAGTTTGTGGCAAATTGATTTAAATGAAAAATTAATCGT--AAC-----AGCTATCACAAA---GTTTCAC--AACTTTTTCTTAAATATTT--AATAAAAATAATTTACAGCTGAAGCAATT--AATT-------ACACCGTTAT-GCTTATCA---CAACT---TTTAAA---CAA-CATGT--TTCATTATACTGATT----AATTTTTATGCT--GTTGAGATT------AACTT-ACTAATTATA------GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT------TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG---TTTT-TCTTTG-GTAATT---CCT-G-ATTCAT-TAA---TCTTTATAT-TAGGA-CTTGGGTAAAGAA-----------AAA---AAACCTTTAATT-TTTTCTT----CT-GT-ATAT---AGAAATTTTTTC-----ATGAGGTA-TT-------TCTTAATATG----ATATCTGAGCTATACT--AAAAAACTAA-TAAATAA-TA---TCACTTTACGAGA--TC--AACATGCTTGGAA---TCCAATGTC-T---AA-----TTAT-TACTGG---AC-AATGC-AATCA-G----ACAACTAGAT-GCAACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTT-CATT--AATTCT-TTGTTTTAT--TTAAAATAATTATTCCATCAgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAGAAGA-GT-TGC-AT-TAA-ACGG-G-AA--AG--TTTCATG-AAA-GAGCATCTTGATCGGTTTAGAGATGGAATTTG-----TTCTTCAAAAG-TTCCAAAGAAGACAGTC-TTTTCCTTGAGAACTAACAA--AATAAATGCA-TTACTTCAAAT---------AAATTAA-----TGGCAACTTTT----AATGCC----ACTT-GAAA-AAGGGGG-CT------TTGACAAACT-ATTAT-A-AAT------AATGCC-------TACAAAC-GACACAG---AAAAAAAAC-GTT-A--TTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAA-TGTTAC-AATA-GGC-ATTAAAAAAAGATGCAT-TCA-TTTCAA-AAATAAATTTACTTTTG-TTC-AATGGCTATATATATATCCCACATCTGTTTG--GATGTCCAATTAAG-AACAAGCAAATTCAATGTTTAA-TTAAG----TAACCTTTGCATATGTTCC-T--ATTA------------------------CTAAG-GATAATGTAT--AATTT-AAATGCAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|5 : cttagaaAG------------T--TT--T--C-AT--TGAA----AAAGCA-T----GACA-CT-GGC-AT-TAA-AA-G-G-CATTAGTATTGCATTGGAA-TAG--CATTGA------cccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|4 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtcT--TGAA----GTTGCA-T----TAGA-CT-TGC-ATATAG-ACTG-G-CA----TTTTAAATT-TAG-CA-----TTG--------AG----GGCATTTGA----gtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcattA-TG-TTTGGCTTGAGAATT---TGCTAATA---GCAGGTGTTTCAAAAAATTACCGTA---TGACGAATTGCTA--ATTTCTGCAATGCCTAGAA-CTAG-AAGAAGGGCATTTAATTATTTG--AAACTATATA--AGAATTTGAAAGATG-CCTACAGTTAC-GACAG-CACGGTatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|6 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTGAGAAGAACAGTTCA--TTTTTCAGAA--CATTTCAATGCTTCTTATT-AAGTTGT--AGTTCAAG-Tggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|1 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagATGCACCCTTCATCA----------AAAAATGCAAAGT-TTGCGCGCAAAT---TTTAATTTTAAATGCAAAGG------------GAATTAAA-----------TCGGCAAACCAAAAAACTATCA-AAACACA-TTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC--GT-TAGTAAAGCAACCCAA-ACCATCTAAAAAAC-AATATGT-CTTCA-T-TAT-GA-TTTTAAA-TTTT-T-CTTCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAAAATT-CTCATTAGAACT-TTTGACTTTTTCTCTATG-GTA--TCTTTCTTGAAAT-ATATAACAGTC-TTA-AAATAGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCCCAAATG-GGTATTGTTTCACCACAT-AT-TGGTTTTCATCTTGA-TTTACTAAAA------AA-TT-ATAA-TAAC-CCACTTT----GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GATGCAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTT-CATTTAATTTCTCTTGT----CTTTTAAAAAAATTcgcgcatgttcaggattgtgt
gi|14 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaATG----TCATTT-AG-TAT-CT--AA------AAATTAATAAATGGAGTCACTTT--G-GATGTGC-AACATGCTTGAAATC-TCCAATGTC-T--AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTGCCAACTATAAAAGATT---AACTTGActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : ATTTCT-ATCCTTTAATTAAAAAATTCATCCAATTGAT-TTGAT--TAAA--TACTTTTCT-G--TT-A-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGATTATTCATAAGCAGGTCTTTAATAAAAACTTTACGGTTAATTTTTTAAAGCGCTGTAATGATCGCGCCTTC-GTA-TT-ATAGGCATTTC-GGGTTTCCAAAA-GTA-ACGGG--AGA-AAAAATTAAAA--TGTGGTTGAC-C-GTCAAGATAAACCAAGGT-TAC--GCG-CGATTTCTTAAAAA---------CCTT--GCGAGC-GCCCA-TGTTTAAAAAAAACCAAG-ACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAA----TCCTGTCGGACAAGGAGGGCGTCCCGATAAGAACCACGCCCTGTGGTGCTAATGTACGA----TAATCAAA-GGGAGT-TT-GAATGCC-GATT-----AAACAGTTGAG-T-G-A--AAATTTTTC--CA-GTGCGAAAATGATTT---ATTTGAACTTTCCAAAAAG-ATCTGT--G--CGAAA-TTCTCTGG--TAGGGGCTATCTC-TTCGGTTGTA-AGTAAGGGC-T-------TAAGGTC------AT-ACA--TTTCCGT-AAT----TA-TTGGCCCCAATTTCTT-----ATA--TTTTAACAGGACCATCTTC-CCACCGA----TTTAC--CAT-ATTCAAGGA-A--AACTGAATAACAAAA--AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGT-GGGATCTAAATCTGTG-TTCATTTAT--TCTTAC--A--TTAGT--AACA---GTAAAACCAAGA-AAT-GGAA-AAAAAATACT----ATCCC-----ACCACCTTTATGAA-TTGAGGAAAAAAgtg
gi|3 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTATCCTTTAATCAAAAA-TTCATCCA---GATCATGAT-ATAAAAATA----TCTTGGTTTTAATATGCTAATTAATAAC-ACGTT-GATT--AATTTAAGTTGTA-TAT-CATA-GCAGGTCATTAA-----ACTTTACGGTTAA-ACT--AA-GCGCTGTAATGATCGGG--TTC-GTATTT-A---GC--ATC-GGGTTCACA--A-GCT-AC-GGGAAGAGACACATTTAAA--C-T-GTTGAC-CAGTCAGAGTAA-CCA-GTT-TAC--GC--CGAGTACC----AA---------CCTTTGGCGAGC-GCC-A-TGTTAGAAA-----CAAGGACGGT-GC------TTA-CCGTTTAGTCCACAGA---ATCTGTCGGAAGGATCGTTCAGATAACACCTGTGCGCGTTCCA--------------TGTACTACTATTATTAG-A-GAG----TTAGATTGCCTGACTAAATAAAA--GT-GAGCT-G-GTTCATATTATCCTTATGTTCGAA---TATTA-T--TTTGA--CTCC--AAAAGCATCCGT--GGGC-AAAATTCCTTGGA-TA-------TCTCCTTAGCT-GTAGA-TA--TCC-TAAGTATGTA-TGTTTCCTTGTTTATAATTT--CTT-AATTTAATA-TTGA---CAAATT--TGACTAATAATTTTTA-CAGAATAAT--TC-TTCC-GACCATTA-ACATCATAATTCA--GATAGATACGAGA------AAT-GACTTTGT--G-TACAAAA--GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GAG-TCCTG--ATCGATTC----AC--T---GCAATATCCTCAATCATAT--AT-T----CTG--T-TGT--ACCATA-ATCAC--TAC--ACCACAGTAAAACCACGATAAA--CCAGACA-TCGCGATAA------CTTTACA---C-----GCCACTGTTAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctATGATCGGG--TTCTGTA-TTTA---GC--ATCAGGGTTC-----AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GTAA-CCA-GTTATACCCGCGGCGATT-CT----AAATTCTAAAACGTTG-GCGAGCCGCC-AATGTTTGAAG-----CAAGGACGGT-GCAAGTGTTTTTGCGTTTTGTCCACAGA---A----TCTGGTCGGAGAGGAATCGATAAGAACACCTGTGGGTCA-------------TGTA--A----TATTCCAA-AGGAAGTTT-GA-TGCC-GATT-----AAACAGT-GAG-T-GGTTTAATTTTTTC--TG-GTGCGAA--TGATTTATTGTT-GA--CTTCCAAAAAG-ATCCGTGGGGGCGAAAATTCCTTGGACTA--------CTCCTTTGGT-GTA-G-TA--GGCTT-------TA-GGTCT-----TTTATAT-TT--CGTAAAT----TATTTG----CAATTT--TA----ATA--TTCTA-CAGGAC-AT--TCTTCAC-GA----TT-AC--CAC-ATTCA--GA-AGTAACTGGA------AAAGGC--TTGT--G-TAGAAAA-GGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GAG-T-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACAT--GTGA----CTA--TCTGTGAATCATT-AT--C--TACCAA--A-AGTA-AACC---GTAAA--CAAGA-A-A-TGGA-AA------CTT---A---CAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcTATAA-C-TGGTT-AC-CTGACGGTGTAA-CCA-GTT-Tccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|11 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaa-GCA-GTGTTTA-GCGTTTTGTCCACAGA---A----TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------TGTACGA----TATTCGAAGGAG----TT-GA-TGCC-GATTA----AAA--GT-GAG-TGG-TTTAGTTTTTTC--TA-GTGCGAA--TTATTT-AT-TTTGA--CTTCTAAAAAG-ATCCGT--GGGcccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|15 : AAAA-GGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAAG-T-CTG--A
gi|4 : ATTGTGAACCATTACGAGGCAG---AAACAACCACAACACACACACGTC-TGTGTGAA-CTCAATAAATGA--CAGAACAAAA-GAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTG---TTGGA--TTGATCGTAAAC-AAGTA-TT-CTAC-GAGT--A-AATTTGTTAATA-AGAAGATGAAG-----CCAAGTGCCGT-ATT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCT-A--GGGAC-TTAAA-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAGAAAA---GCATTTAATGAAC-AGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-AT--CAAA-TGTCCTTTTCACATGC-CATTAAATGT-CCATGATTA-TGAC---T-CATTTCA----------A-ATGC----CCTCAATGC-TAA-ATT-TAAAA--TGCC-AG-----T---------CTATAT-GCAAG-TCTAA-T-GC-A-ACTTCAAA-TGGG--ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGC----AA---T-CTATAATG--C----------CT-TTTAAAT-----GC-----TA------GTGCCATG---CTTTT-TCAAA--TGAAAAA-CT-GTTC-C-ATT-CGATGTT--T---ATTTTCTAAATGC--CA-ATTCG---CC--TTTAC-ATTTTTTCAGA-AA---TGTT---ATGGCAATGA-TA-TTT-CAAATGCTT-TGA----AT--AAAAATGCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTT
gi|1 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaTTGGGA-C--TTACGAGGCAAGAAAAACAAACC-------CAC-CGTCCTGTG-GAA-C--ATTAAATGGATCAGAACAAAAGTAG---G---TTGTGGATTGTATGTAAAATATGTG-GATTG---T--GATCT-GATCG-A--CAAAGTATTT-CTAC-GAGTTAAGGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGT-TTTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCAA--GAGAC-TTTAGTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAAT-AAAATT----TCTCT-CTCCAG-GGG-ATTAATT--AA-GCCAAAAG-AAAG--GCATTT--TTAAC-AG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAAT--C-AATTGT-CTTTTC--ATGC-CATTAAATGT-TCATT-TTATTGAAACTT-CATTTCCAAGCC-A--AA-ATACATG-CTTTA-------A-ATT-T-AAATTTG-C-AAAGTTTT---------CTA-ATGGCAAG-TCTAA-TGGCAA-ACTTC-AATTGGGC-ATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGC----AATTTTAC--TTATGGTC----------CT-TTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTT-T-CAA--TGGAAAA-CT---TC-A-ATT-CAATG-T--T---TATTTCT-AA--------GTTCAAT-CT--TCTACA---TTTTCA---AA---TG-----ATGTCCA-AC-CA-TTG-C--AAGCTGATAA----ATTTATAG-------AC-T--TCAATGCAAAttgtaagg
gi|7 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgTTGTGA-CCATTACGAGGCAG---AAACA-----------CAC-CGTC-TGTGTGAACC--AATAAATGA--CAGAAC-AAAAGAG-TTGAACTTGTGGATTGTGAAT--AATATTTGTGATTGTGAT--GA--T-GATCGTAG-C-AAGTA-TTGCTACGGAGTA-AGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCA-AGGGAGAC-T--AG-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------AC-CGAAATCTACTCTCT-TCCC-C-AGGCATT-CTTTAAATGC---AAG-AAAAAGGCTTTTATTA-AC-AG-TTT
gi|5 : AAATTGGGTGTGG-ATGGCA-AG-GAGACTTAGTG-T--AAAAAA---AAAAtga
gi|5 : ATTTAAAT-GCCAG-TCTA------ATG-CA--AGTCTAAT-GT-A-AC----CTCAATGG----GATTCC-CA-TGT-AGTCTCA-ATGCTATTCCAA--T-GCAATACTAATG-------CCTTTTAATGCCAGTGTC-ATGCT-T-TTTCAATGA-A-A-ACTGT-CAA--TT-C-AA-----TGTTTATTTTCTA-AT-GCAAGTTCCCATT-AC-ATTTTTC-AA----A--ATG-TTATG---G-----CAA---TGC--TA--TTTCAATGCTTTGAA---TAA--AAATG--C----------TTCTTC-AAT-----GCAAAATCA------ATGCAGTT---CTTTT-T-aacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|10 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaTGCTATTTTAG--T-TCA--ATTC-TAA----TGCATTTCAATGAC-TTCTA-ATGCA-ggtaaggga
gi|9 : C-ATTTAAA--TGTCAT---TA--GAC---T-CATTC--ATGCC-----------A-A-----AATGCAT-ATATT-T-AAA--TG-CTAG-----T---------CTA-ATTGCAA--TCTAA-T-GC-A-ACCCC-AA-TGGATCATC-CCATGT-AGT--CTCA------T--CA--TTCCA-TGC----A------C--TAATG--C----------CT-TTT-AAT-----GC-----CA---------TCATG---CTTTCAT-GAA------AAA-CT-G-TC-A-ATCACA----T--T---ATTTTCT-AAT-CA-A--GTTC----CC--AT-ACA----TTTC----AAAA-TTTT---ATGC--ATGC-GATTTCAT--ATGCTA-TGA----AT-AGAAAATGCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTttgccaataaacgtttcatatattttaaaattgaaacgctaattcatgtttacgttttgattatggagcttctatgcatttttttttcaaaaaatcgtattgcaattctatttcaatgctctgaataattttttttattaattcaaatcaatggtgttccttcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|5 : TA-TGAC---T-CATTTCAATGC---TTTACATGCATATCTT-------T-A-ATT-T-AAA--TG-CCAG-----T---------CTA-AT-GCAAG-TCTAA-T-GT-A-ACCTC-AA-TGGG--ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGC----AA---TAC--TAATG--C----------CT-TTT-AAT-----GC-----CA------GTGTCATG---CTTTT-T-CAA--TGA-AAA-CT-G-TC-A-ATT-CAATGTT--T---ATTTTCT-AATGCA-A--GTTC----CC--ATTACA--TTTTTCAA--AA---TGTT---ATGGCAATGC-TATTTC-A--ATGCTT-TGA----AT--AAAAATGCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTtgta
gi|10 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---TGC--TA--TTTTAGTTC----AA---TTC--TAATG--CATTTCAATGACT-TCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTT-T-AAAATTG--AAA-C--G-CT-A-ATT-C-ATGTT--TACGTTTTGAT-TATGGAGC---TTCTATGCA--TTT----TTTTTTCAAAAAA---TCGT---ATTGCAATTC-TATTTC-A--ATGCTC-TGA----AT-----AATTTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTTttggtaaggga
gi|13 : TTT-T-CAA--TG--AAAACT-G-CC-ATGTT-CAAT--T--T---TTATTTT-AA-ATACCAAGCTC----CA--AT-ACATTTTTTTTCAA-AA---TGCT---ATTGCAATTC-TATTTC-A--ATGCTC-TGG----A----AAAA--CT--TT-T--TCAATTCAAAATCAA-TG-cgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : ataactgcatctaacataTT-T-CAA--TG--AAA-CTCG-TCGA-ATT-CAATGCTGAT---ATTTTCT-AAT-CA-A--GTTC----CCCTTTTACA--TTTTTC----AAAAATGTTTACATGCAAATGCATATTTC-A--ATGCTT-TGACAAAATAAAAGAATGCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTTtgaacttttttat
gi|16 : AAATCAA-TG-CAGTTCTTTcttgaaa
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 11111111111111111111 111111111111111111111111111 11111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 222222222 1 1 555555555555555 11111 1 11 2222 1 2222 1111 1 1 1 2 222222 1 222 00000000000000000000 22 333 1 1 333 111 222 6666666666666666666 11 2222 2222 22 11 333333333 11 111 11 11 22222 4444444 1 111111111111111111111111111 22222 1111 11 1 1 2 1 1 1111 1 2 2 222 2 1 11 333 222 333 1 2 2 2 2 3333 1 99999999999999999999999999999999999999999999999999 1 111 1 2222222 1 55555555555 1 4444 33 444444444444444 111 8888888888888888888888888888888888888888888888888888 22 11 66666 44444444 7777777 22 3333333 222 222 333 2 11 1 1 55555555555555555555555555555555555 2 7777777777777777777 44444444444444444 3333333333 7777777777 11 2222 11 333333 1 33333 22 1 22 333 3333333333333333 111 1 1 1 2222 1 111 1 222222222222 33 1 1 33 555555 1 5555555555555555555555555555555555555555555555555555555 333 22 22 4444 11 11 22 11 11 33333 1 2222222 777777777777777777 11 11 1 22222 1111 33333 1 11 1111 11 1 1 1 1 11 11 1 1 444444444444444 1 11 1 1 1 1 2222 1 111 11 99999999999999999999999999999999999999999999999999999 1 22 2222222 1 11 11 11111 11 11 4444444 1 111 11 33333333333 333333 22 1 2222 22222 11111 22222 1 111111 1 1 11111 2222 1 1 222 33333333 1 11 11 1 111 11 11 55555555555555555 22222 11 33333 11 11 1 22 1 2222 22 111 11 111 1 4444444444444444444444444 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 1 22 11 1 3333 1 1 11 1111 111 22 1 1 1 11111 1 2 22 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 44444444444 1 11 1 111 2222 22222 1 1 1 22 222 1111 2222 666666666666666 11 22222222 1 1111 111 1111 11111 2222222222 11111 22222222222222 111 11 11 333333333 111 111 222222222 1111 11 111
lowQualScore : 666666666 0 0 666666666666666 77777 0 33 1111 0 1111 2 2222 0 0 0 0 111111 3 555 22222222222222222222 1 22 0 777 999 0 0 6 0 0 1 1 111 777 000 1111111111111111111 33 1111 3 1111 33 33 2 000000000 33 777 33 33 44444 2222222 2 0 7 000000000000000000000000000 55555 3 4444 33 55 0 0 0 0 0 4444 0 3 88 3 111 3 3 7 44 777 6 7 222 222 000 2 11 1 0 3 3 7 3 7 3 6666 3 22222222222222222222222222222222222222222222222222 5 4 3 999 1 3 8888888 3 44444444444 5 0000 7 00 7 7 777777777777777 333 7777777777777777777777777777777777777777777777777777 00 7 11 00000 00000000 3333333 44 1 2222222 1 111 1 7 666 6 1 1 1 111 3 11 2 1 3 33333333333333333333333333333333333 3 0 1 6666666666666666666 333 1 7 00000000000000000 0 1 0000000000 5555555555 1 7 33 7777 3 33 888888 3 0 33333 66 0 33 3 3 111 9999999999999999 777 0 0 0 1111 2 0 111 0 999999999999 77 00 5 3 00 1 6 888888 1 5 5555555555555555555555555555555555555555555555555555555 7 7 7 777 44 00 7 7 4444 44 7 7 1 1 33 1 7 99 1 22 7 44 44 1 55555 0 8888888 333333333333333333 33 33 0 88888 4444 00000 0 11 3 3 7777 2 2 22 0 0 0 0 33 22 0 0 333333333333333 0 33 0 0 0 0 1111 0 88 8 444 00 66666666666666666666666666666666666666666666666666666 8 99 0 77 8 8 4444444 8 8 6 11 11 8 11 8 0 77777 11 0 11 55 8888888 3 2 4 0 444 33 44444444444 444444 33 0 1111 00000 44444 55555 0 888888 0 0 88888 1111 0 0 111 22222222 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 44 33 22222 33 2 22 0 77 0 4444 55 777 33 111 0 1111111111111111111111111 3 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 2 777 66666666666666666 0 3 33 33 2 3 8888 0 5 3 33 4444 777 3 22 0 0 0 77777 0 0 00 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 1 22 0 0 1111 66666666 0 1111 0 8888 0 0 33 3 0000 33 6 3 9 44 0 44444444444 3 22 3 666 8888 55555 3 3 3 00 333 3 7 999 8 7777 222 6666 8 111111111111111 8 8 11 8 00000000 8 6 8 8 8 8 8 8 2222 8 111 2222 99 99 7 44444 99 99 9999999999 6 66666 66666666666666 111 5 66 88 11 666 5 5 5 3 66 1 5 444444444 333 1 666 5 444444444 5 888 5 5 5 5 1 0000 9999 33 5 222 5 66 3 5 5
lowQualScore : ......... . . ............... ..... . .. .... . .... . .... . . . . ...... . ... .................... . .. . ... ... . . . . . . . ... ... ... ................... .. .... . .... .. .. . ......... .. ... .. .. ..... ....... . . . ........................... ..... . .... .. .. . . . . . .... . . .. . ... . . . .. ... . . ... ... ... . .. . . . . . . . . .... . .................................................. . . . ... . . ....... . ........... . .... . .. . . ............... ... .................................................... .. . .. ..... ........ ....... .. . ....... . ... . . ... . . . . ... . .. . . . ................................... . . . ................... ... . . ................. . . .......... .......... . . .. .... . .. ...... . . ..... .. . .. . . ... ................ ... . . . .... . . ... . ............ .. .. . . .. . . ...... . . ....................................................... . . . ... .. .. . . .... .. . . . . .. . . .. . .. . .. .. . ..... . ....... .................. .. .. . ..... .... ..... . .. . . .... . . .. . . . . .. .. . . ............... . .. . . . . .... . .. . ... .. ..................................................... . .. . .. . . ....... . . . .. .. . .. . . ..... .. . .. .. ....... . . . . ... .. ........... ...... .. . .... ..... ..... ..... . ...... . . ..... .... . . ... ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. ..... .. . .. . .. . .... .. ... .. ... . ......................... . ..................................................................................................................... . . ... ................. . . .. .. . . .... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . .. . ........... . .. . ... .... ..... . . . .. ... . . ... . .... ... .... . ............... . . .. . ........ . . . . . . . . .... . ... .... .. .. . ..... .. .. .......... . ..... .............. ... . .. .. .. ... . . . . .. . . ......... ... . ... . ......... . ... . . . . . .... .... .. . ... . .. . . .
lowQualScore : 888888888 0 0 000000000000000 55555 0 88 2222 0 2222 0 0000 0 0 0 0 222222 3 000 77777777777777777777 0 00 7 777 333 7 7 7 0 0 0 0 222 555 000 0000000000000000000 88 2222 2 2222 88 22 0 222222222 88 555 22 88 55555 5555555 0 0 0 222222222222222222222222222 00000 2 8888 88 88 0 0 0 0 0 8888 0 7 33 7 777 3 3 3 00 777 7 3 333 333 777 0 77 0 7 3 7 3 7 3 7 0000 3 77777777777777777777777777777777777777777777777777 7 7 3 000 0 3 0000000 3 77777777777 0 7777 3 33 3 3 777777777777777 777 7777777777777777777777777777777777777777777777777777 00 3 00 00000 00000000 7777777 00 0 0000000 0 000 0 3 333 7 0 0 0 777 7 00 0 0 3 33333333333333333333333333333333333 7 7 0 7777777777777777777 000 0 3 00000000000000000 7 0 0000000000 0000000000 0 3 88 5555 2 88 888888 2 0 88888 55 0 88 2 2 222 8888888888888888 555 0 0 0 2222 0 0 000 0 555555555555 77 33 0 3 77 0 7 777777 0 5 0000000000000000000000000000000000000000000000000000000 3 3 3 777 33 77 3 3 3333 77 3 3 0 0 33 0 3 33 0 00 3 77 77 0 77777 0 2222222 888888888888888888 88 88 0 55555 8888 00000 0 22 2 2 2222 5 5 55 8 0 0 0 88 55 0 0 222222222222222 0 88 0 0 0 0 2222 0 88 0 000 22 44444444444444444444444444444444444444444444444444444 0 44 0 00 0 0 0000000 0 0 0 88 00 0 00 8 8 22222 00 8 00 88 2222222 2 5 2 0 888 88 55555555555 888888 88 0 2222 22222 88888 00000 0 888888 0 0 55555 2222 0 0 000 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 22 88 22222 88 5 55 0 55 0 0000 55 555 88 000 0 8888888888888888888888888 3 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 0 2 88 88 8 2 2222 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 55 00000 0 0 00000 0 000000000 0 0 000 0 22 8 666666666 000 0 00 0 0 2222 22222222 0 2222 0 2222 0 0 88 2 0000 88 5 2 8 22 0 77777777777 3 77 3 777 3333 33333 3 3 3 77 888 2 0 555 0 2222 444 4444 0 444444444444444 0 0 00 0 22222222 0 0 0 0 0 0 0 0 0000 0 888 5555 22 22 5 22222 22 22 2222222222 7 77777 22222222222222 777 0 99 88 99 222 0 0 0 2 99 0 0 666666666 888 0 222 0 000000000 0 888 6 0 0 0 0 6666 0000 88 0 888 0 99 2 0 0
consensus : TAGAGAAAAAT--A-AC-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TT----AAAA-T-TGC-ATTAA-ACG-GGAAAGTTT-TTCA-TTGAA-CAGC--CTTGAT--------A---G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC--AATA---GCAG-TGTTTCAAANAA-T------TAA-----TGCTA--TTTT----AATGCC----ACT--GAA-AAGGGCATT-----ATTTGA--AACT-T-TAT-AA--ATT----AAATGCC------TACAA-CGACACA-----------------------GT-TGAA-----AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATGC-CCT-TCATCA----------A----AATG---A-AT--TAA--GCAC-----ATT-A---AAATGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAA---GTTTCAC--AACTTTTTCTTGAATATTTA--ATAAAAAT---TTACAGCTGAAGCAATTTTAAT--------ACACCGTTAT-GTNNATCA---CAAC----TCTAAAAAACAA-TATGT-CTTCATTATACTGATT----AATTTTTAT-CT--GTTGA-------ATTAACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTA--TCTTC--TGAATTCAT-TAA---TCTTTATA--TAGGA-CTTTGGTAAAGAAAA---AAACAA-----AAAACNTTTTATTATTTTCTTCCCG--GGGTATAT---AGAGATTTTTTTCCC-AATG-GGTATT--------ACATAATA--TGTCATCTGAG-TATACT--AAAAA-----TTAAT-AAT--AG-TCACTTTG-GATGT-CA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-T-GC-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTT-CATT--ATTTCTCTTGT-----TTTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCA---GAT-ATGAT-ATAAAAATA----TCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAA-TTAATTTAAGTTGTATTATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATTTA---GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CC-TT--G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGA-----CGAGGAGN------GAACACCNGTGCGNGTCACG--------------TGTACGA-TATTC-GAAGGGAGTTT-GA-TGCC-GATTAA--AACAG-TGAG-TGGTTTAATTTTTTC--TA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---CAATTT-TNA-TA-----TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTC-AGA-AGTA-ACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTG---NCT--ATCTGTG-ATCA-TTATC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTC-TGTGTGAACC-AATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TAT-GACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-CTTCAATGCT-A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG--AAA--CT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CCNTT--AC-ATTTTTT--C----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAA-T--A-AC-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TT----AGAN-T-TGC-ATTAA-ACG-G-AAAGTTT-TNCA-TTGAA-CAGC--CTTGA---------A---G--G---GNATTTGATTCCTCAAAAGTTTCCAAAGGAGACA-TG-TTTTNCTTGAGAATTNA---AATA---GCAG-TGTTTCAAANA---------TAA-----TGCTA--TTTT----AATGCC----ACT--GAA-AAGGGCGTT-----ATT-GA--AACT-T-TAT-AA--ATT----AAATGC-------TACGA-CGACACG-----------------------GT-TGAA-----AAAAACAGTT-A--TTT--CAGAA-ACATTT-AAT-CTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAAATATNGCAATTAAAAAAAGATGCAT-TCATTTTCAAGAAATAAATTTACTTTTGTTTCAAATGNCCATATANNTATCCCGCATCTGTTTGGCGATGNCCAATTNAGGGACAAGCAAATTCAATGTTTAATTTAAGTTGTTAACCTTTGCATATGC-CCT-TCATCA----------A----AATG---A-ATN-TAAG-GCAA-----ATTAATTTAAATGCAAAGNTTGTG-GCAAATT--GANTT-AAATG-AAA---AATTAA-TCGNCAAACCAAAAAGCTATCACAAACACGTTTCACCAAACTTTTTCTTGAATATTTA--ATAAAAATAATCTACAGCTGAAGCAATTTTAATTCAAACTAACACCGNTATAGCNNANCAACCCAACNCCATCTAAAAAACAAACATGT-CTTCATTATACTGATTTTTAAATTTTTATGCTTCGTTGAGATTTAAATTAACTCCACTNATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGNGAAGAATTNAAATCAATCACAAGANTTNTNANTAGAACTATTTGACTTTTTCTCTNTG-GTAATTCTTCCTTGAANTCATATAACAGTCTTTATANATAGGAACCTNGGTAAAGAAAACACAAACAANAAAAAAAANNNTTNATTATTTTCTTCCCGCCGGNTATATGAAAGGGANTTTTTCCCCAAATGAGGTATTNTTTCACCNCNTAATA--TGTCATCT-AG-TATACT--AAAA------TTAAT-AAT--AG-TCACTTTG-GATGT-C--AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACGACT-GA-T-GC-AACCTA------ATT---AACTTGANGCAAGGCCGCCGGGGACCCCTT-CATTTAANTTCTCTTGTTTTACTTTTAAAANAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTTATCCTTTAATCAAAAAATTCATCCAATTGATCNTGAT-ATAAAAATACTTTTCTTGGTTTTAATATGCTNANTAATAACCACNTTAGANTTTAATTTAANTTNNATTATTCATAAGCAGGTCNTTAATAAAAACTTTA-CGGTTAATNCTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-A---GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGNGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CC-TT--G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCCGGTCGGA-----CGNGNAGN------GANNACCGNTNCGNNNCGCG--------------TGTACGA-TATTC-GAAGGGAGTT--GA-TGCC-GATTAA--AACAG-TGAG-T-GNTTAATTTTTTC--TA-GTGCG--AATNATTT-TTGTTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---CAATTT-TGA-TA-----TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTC-AGA-AG-A-ACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTNACA--TGT----NCT--ATCTGTG-ATCA-TTAT--CTA-CA--ACAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----GCCACTTTTATGAAGTTGAGGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTC-TGTGTGAAC--AATAAATGA--CAGAACAAAAGGAGTTG---TTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAG-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-GAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTNA-G-T--AAAAAA---AAAATNCTNNTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CG-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATNAACAG-TTTG-----TAT-G-CAT-ATTCGAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCTATTTAAATGTTCATTATTA-TGA---CTCATTTCAATGCC--TTA-ATGCA-A-CTTCAATGCT-A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG--AAA--CT-G-TC-A-ATT-CAATGTT--TNTTTTCT-AAT---GC-A-CGTTC---CCNTT--AC-ATTTTTT--C----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTNTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAAC-TTAA-ACCTGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAGAAGAG-T-TGC-ATTAA-ACG-GGAAAGTTT---CA-TGAAA-GAGCATCTTGATCGGTTTAGA---GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAACAAAATAAATGCAT-TACTTCAAATAAAT------TAA-----TGGCAACTTTT----AATGCC----ACTTGAAA-AAGGGGGCT------TT-GACAAACTAT-TAT-AA--AT------AATGCC------TACAAACGACACA-----------------------G---AAA-----AAAAAC-GTT-A--TTT--CAGAAGACTTTA-AAT-TCTTTTA-TAAAATTGTTAA-TCAAAAT-GTTACAA-TA-GGCA-TTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAGA-ACAAGCAAATTCAATGTTTAATT-AAGT----AACCTTTGCATATGTTCCTATTACTA----------AGGATAATGTATA-ATT-TAAATGCACCCTTCATCAAA--AAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATT-CACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAAT-CAAACTAACAC-GTTA--GTAAAGCAACCCAA-ACCATCTAAAAAACAA-TATGT-CTTCATTAT---GATTTT-AAATTTTT---CTTCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTA--TCTTTCTTGAAAT-ATATAACAGTC-TTA-AAATAGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCCCAAATG-GGTATTGTTTCACCACATATTGGTTTTCATCT-TGATTTACTAAAAAA------TT-AT-AAT--AACCCACTTT--GATGT-CAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-T-GCAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTT-CATTTAATTTCTCTTGT----CTTTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCAATTGAT-TTGAT--TAAA--TACTTTTCT--GTT---ATATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGATTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATT-ATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGG----GAGAAAAAATTAAAA-TGTGGTTGA--CCGTCAAGATAAACCAAGGT-TAC--GCG-CGATTT-CTTAAAAA---------CC-TT--G-CGAGC-GCCCA-TGTTTAAAAAAAACCAAGACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGA-----CAAGGAGG------GCGTCCCGATAAGAACCACGCCCTGTGGTGCTAATGTACGA-TAATC-AAAGGGAGTTTGAA-TGCC-GATT-A--AACAGTTGAG-T-GA--AAATTTTTC--CA-GTGCGAAAATGA--T-TTATTTGAACTTTCCAAAAAGATCTGT----GCG-AAATTCTCTGGTAGGGGCTATCT-CTTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCCAATTTCTTA-TA-----TTTTAACAGGACC-ATCTTC-CCACCG---ATTTACCAT----ATTCAAGG-AA-A-ACTGAATAACA-AAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTGTG-TTCATTTATTCTTA-CA--TTAGT--AACA---GTAAAACCAAGAA-AT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCCTGTG-GAAC--ATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCC-CAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-CTTTA------A-ATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCAT--TCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAA--CT---TC-A-ATT-CAATGTT--TA-TTTCT-AA----------GTTCAATCTTCT--AC-A--TTTT--C----AAATGATGTC-------CAA--C-CATTGC-A-A-GCTG-------AT--A-AATTTATAG----AC-T--TCAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTG--AAA--C--G-CT-A-ATT-CA-TGTT--TACGTTTT-GATTATGG-A--GCTT---CTAT---GC-ATTTTTT--TTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--------AAT-TTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTT
gi|11 : GCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNN-----NNNNNNNN------NNNNNNNNNNNNNNNNNNNN--------------TGTACGA-TATTC-GAA-GGAGTT--GA-TGCC-GATTAA--A--AG-TGAG-TGGTTTAGTTTTTTC--TA-GTGCG--AATTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TG--AAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT----C-A-AGTTC---CCCTTTTAC-ATTTTT---C----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG--AAAA-CT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CAAT---AC-ATTTTTTTTC----AAA-A-TGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-T--TCAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataA--TGTCATTT-AG-TAT-CT--AAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC--AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATT-GC-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : -AAAAGGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAA-GT-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAAT--A-AC-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TT----AAAA-T-TGC-ATTAA-ACG-G-AAAGTTT-TTCA-TTGAA-CAGT--CTTGAT--------A---G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA---AATA---GCAG-T-TTTCAAA-A---------TAA-----TGCTA--TTTT----AATGCC----ATT--GAA-AAGCGCATT-----ATT-GA--AACT-TCTA--AA--ATT----AAATGC-------TACAA-CG-CACA-----------------------GTATGAA-----AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAAG-ACA-GCAAATTCAATGTT-AATT-AAGTTGTTAACCTT-GCATATGCACCT-TCATCA----------A----AATG---------------CAG-----ATT-----------------TGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCAAAAG-----TTCAC--AACTTTTTCTTGAATATTTACAATAAAAAT---TTACAGCTGAAGCAATT--AAT--------ACACCGGTGTAGTCCATCA---CAAT----TCTAAA---CA--TATGTTCTTCAGT-TATTGAT-----AATTTT-AT-CT--GTTGA-------ATTAACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTA----TTC--TGAATTCAT-TAA---TCTTAAT---TAGGA-CTTTGGTAAA--------AAACAA------AAACTTTTTATTATTTTCTT-CTG--GGATAT-----AGAGATTTTTTTTTTCAAT--GGTAT--------GACAT-ATA--TGTCATCTGAG-TATACT--AAAA------TTAAT-AAT--A--TCACTTTGAGATGT-CA-AACATGCTTGAAA---TCCAATGTCTA--AAA-----TTA--CACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTG------TCTTAAAATAATTA-TCTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATC---AAATTCATCCA---GAT-ATGATGAT--AAATA----TC-TGG-TTTAATATGCTAATTAATAA-CACGTTAGAA--TAATTTAAGTTGTAATA-TCAT-AGCAGGTCATT-----AAACTTTG-CGGTTAACACTTT-AAGCGCC------------------GTA--ATGATCGGG--TTC-GTATT-A---GCTA--TCGGGTTC------AGCT-ACGGGGAAGAGAAAAATTT-ATA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT--G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNN-----NNNNNNNN------NNNNNNNNNNNNNNNNNNNN--------------TGTACGA-TATTC-GAA--GAGTT--GA-TGCC-GATTAA-----AG-TGAG-T-GTTTAGTTTTTTC--TA-GTGCG--AATTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGG-TGTA-A-TA--GGC-T-------T-AGGTC------TTTATA--TTCGT-AAT----TATT-G---CAATTT-T-A-TA-----TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TAACCAT----ATTC-AGA-AGTA-ACTG------G-AAA-GA--TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCA---C----AC--A---GCAACG-----GGTGACA--TGT----ACT--ATCTGTG-ATCA-TTAT--CTA-CA--A-AGT--AACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTC-TGTGTGAAA--AATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TAT-GACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGC-ATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-CTTCAATGCT-A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-AT--T-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAA--CT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---GC-ATCGTTC---CCTTT--ACAATTTTTT--C--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAAT--ACACATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTT----AAATATATGC-ATTAACATGTG-AAAGTTT-TT-A-TTGAAACAGC---TTGA---------AAATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA---AATA---GCAG-T-TTTCAAACA---------TAA-----TTCTA--TTTC----A-TGCC----ACT--AAA----GGCATT-----ATTTGA--AACT-T-TATTAA--ATT----AAATGC-------TACAA-CGACACA------------------------T-TGAA-----AAAAACAGTT-A--TTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATTAAAA---GAT-CAT-TCATTTTCA-GAAATA----TACTTTTGTTTCAAATGCTCATATAA-TATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT-TCCTCATACTTAGGATA----AATG---ATATAATAAT-GCAC-----CTTCATCAAAATGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAA---GTTTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAACT---TTT---AAAC-AACATGT--TTCATTATACTGATT----AATTTTTATGCT--GTTGAG------ATTAACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTCCT-----GATTCAT-TAA---TCTTTATAT-TAGGA-CTTGGGTAAAGAAAA--------------AAAACCTTTAATT-TTTTCTTCT------GTATAT---AGAAATTTTTTC-----ATGAGGTATTT--------CTTAATA--TGATATCTGAGCTATACT--AAAAAACTAATAAAT-AAT--A--TCACTTTACGAGAT-C--AACATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-T-GC-AACTTT------ATA---AACTTGAAGCA-----GCCTGGGACCCCTT-CATT--AATTCT-TTGTTTTA--TTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATCAAAAA-TTCATCCA---GATCATGAT-ATAAAAATA----TCTTGGTTTTAATATGCTAATTAATAAC-ACGTT-GA--TTAATTTAAGTTGTAT-AT-CATA-GCAGGTCATTAA-----ACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATTTA---GC-A--TCGGGTTCAC---AAGCT-ACGGG-AAGAGACACATTTAAA--C-TG-TTGAC-CAGTCAGAGT-AACC-AGTT-TAC--GC--CGA-GTACC----AA---------CC-TTTGG-CGAGC-G-CCA-TGTTA----GAAACAAGGACGG-TGC------TTA-CCGTTTAGTCCACA---GAATCT-GTCGGAAGGATCGTTCAGA------TAACACCTGTGCGCGTTCCA--------------TGTACTACTATTA-TTAGAGAGTTA-GATTGCCTGACTAAATAAAAG-TGAGCT-GGTTCATATTATCCTTATGTTCG--AAT-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGC-TGTAGA-TA--TCC-TAAGTATGT-ATGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGA---CAAATT-TGACTAATAATTTTT-ACAGAA-TAA--TTC-TTC-CGACCA-TTAACATCATAATTC-AGATAG-ATACGA------G-AAATGACTTTG--TG-TAC-AAAA-GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GA-GTCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATA--TAT----TCT--GT-TGT--ACCA-TAATCACTA-CACCACAGTAAAACCACGATAAA--CCAG-ACATCGCGATA------AC--TTTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATTTA---GC-A--TCAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GT-AACC-AGTTATACCCGCGGCGA-TT-CT----AAATTCTAAAACG-TT--GGCGAGCCG-CCAATGTTT----GAAGCAAGGACGG-TGCAAGTGTTTTTGCGTTTTGTCCACA---GAATCTGGTCGGA------GAGGAATCGATAAGAACACC--TGTGGGTCA----------------TGTA--A-TATTCCAAAGGAAGTTT-GA-TGCC-GATT-A--AACAG-TGAG-TGGTTTAATTTTTTC--TG-GTGCG--AATGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGG-TGTA-G-TA--GGCTT-------T-AGGTCT-----TTTATAT-TTCGTAAAT----TATTTG---CAATTT-TAA-TA-----TTCT-ACAGGA-C-A--TTCTTCA-CG---A-TTACCAC----ATTC-AGA-AGTA-ACTG------GAAAA-GGC-TTG--TG-TAG-AAAAGGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GA-GT-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACA--TGTG---ACT--ATCTGTGAATCA-TTAT--CTACCA--AAAGT-AAACC---GTAAA--CAAG-A-AA-TGGA-A------AC--TT---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTC-TGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TAT-GACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----CCTCAATGCTAA-ATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-AT--T-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAA--CT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---GC-C-AATTCG--CCTTT--AC-ATTTTTT--C----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATCTT------T-A-ATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGA-AAA--CT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CCATT--AC-ATTTTTC--------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-T--A-AC-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TT----AAAA-T-TGCTATTAA-ATG-GAAAAGTTTGTACAGTTGAttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCT-AATA---GCAGGTGTTTCAAAAAATTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTA-GAAGAAGGGCATTTAATTATTTGA--AACT-A-TAT-AAGAATTTGAAAGATGCCTACAGTTACGA-CAGCACGGTGGTTTCGCCCCAGTTGAAGATGT-TGAAGTGAGAAGAACAGTTCATTTTT--CAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAGT-gaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTC-TGTGTGAACC-AATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : ATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCA------------T-ATATTT-AAA--TG-CTAG-----TCTA-ATTGCAA--TCTAAT-GC-AACCCC-AA-TGG--ATCATCCCATGT-AGT--CTCA------T--CA--TTCCA-TGCA------C--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TG--AAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT----C-A-AGTTC---CCAT---AC-ATTTC----------AA-AATTTT---ATG-CA-TGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 2222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 1 11111 9999999999999999999999999999999999999999 1111 11 1 1 1 1 1111 1 1 1 111 1 1 11 222 222 1 1 1 1 1 3333 1 2222222222222222222222222222222222222222222222222222 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 44444 2222 33333 1 44444444 1 11 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 1 11 11 22222 1 11111 777777777777777777 11 11 1 1111 1111 33333 1 1111 11 1 1 1 11 11 1 1 444444444444444 22 1 1 1 1 2222 1 111 888888888888888888888888888888888888888888888888888888888 33333 11 11111 11 11 4444444 1 111 11 33333333333 333333 22 1 2222 22222 1 22222 11 1 111111 1 1 11111 2222 11 1 33333333 1 11 11 1 111 11 11 55555555555555555 22222 11 33333 11 11 1 2222 1 2222 22 111 11 111 1 333333333333333333333333 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 1111111 11111111 11 22222 1 111 1111 111 2222222222 11111 22222222222222 111 22 22222222 111 11111 22222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 5 88888 3 8888888888888888888888888888888888888888 3 4444 33 55 0 0 8 6 0 0 4444 0 3 7 3 999 3 3 7 44 333 7 6 7 7 7 000 2 3 3 7 3 7 3 6666 3 0000000000000000000000000000000000000000000000000000 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 8 7 3 3 66666666666666666666666 1 7 99999 7 8888 0 66666 3 6 88888888 6 33 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 6 44 44 99999 7 0 66666 3 333333333333333333 33 33 0 4444 4444 00000 0 2 2 3 3 7777 2 2 22 7 0 0 0 33 22 0 0 333333333333333 33 0 0 0 0 1111 0 88 8 444 8 666666666666666666666666666666666666666666666666666666666 8 99 0 5 8 8 8 0 22222 8 8 0 8 8 11 8 0 44444 11 0 11 55 8888888 3 2 4 0 444 33 44444444444 444444 33 0 1111 00000 0 99999 33 0 888888 0 0 88888 1111 33 0 66 22222222 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 33333 33 2 22 0 6666 0 2222 55 777 33 111 0 999999999999999999999999 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 7777777 44444444 8 11 8 8 00000 8 8 8 8 8 0 8 88 8 0 8 111 2222 99 99 7 111 3 99 99 9999999999 6 66666 66666666666666 111 5 66 55 5 666 5 5 5 3 66 5 11111111 333 00000 5 3 22222222 5 888 5 5 5 5 4 0000 9999 33 5 222 5 66 3 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... . ..... . ........................................ . .... .. .. . . . . . . .... . . . . ... . . . .. ... . . . . . ... . . . . . . . .... . .................................................... . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . . ....................... . . ..... . .... . ..... . . ........ . .. . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. . .. .. ..... . . ..... . .................. .. .. . .... .... ..... . . . . . .... . . .. . . . . .. .. . . ............... .. . . . . .... . .. . ... . ......................................................... . .. . . . . . . ..... . . . . . .. . . ..... .. . .. .. ....... . . . . ... .. ........... ...... .. . .... ..... . ..... .. . ...... . . ..... .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. ..... .. . .. . .... . .... .. ... .. ... . ........................ . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ....... ........ . .. . . ..... . . . . . . . .. . . . ... .... .. .. . ... . .. .. .......... . ..... .............. ... . .. .. . ... . . . . .. . ........ ... ..... . . ........ . ... . . . . . .... .... .. . ... . .. . . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 0 55555 2 5555555555555555555555555555555555555555 2 8888 88 88 0 0 8 5 0 0 8888 0 3 3 3 777 3 3 3 00 333 3 7 3 3 3 777 0 3 3 3 3 3 3 0000 3 0000000000000000000000000000000000000000000000000000 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 3 77777777777777777777777 0 3 00000 3 3333 7 77777 3 7 33333333 0 88 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 0 77 77 77777 3 0 88888 2 888888888888888888 88 88 0 2222 8888 00000 0 5 5 2 2 2222 5 5 55 0 0 0 0 88 55 0 0 222222222222222 88 0 0 0 0 2222 0 88 0 000 8 888888888888888888888888888888888888888888888888888888888 0 44 8 6 0 0 0 8 22222 0 0 8 0 0 00 8 8 44444 00 8 00 88 2222222 2 5 2 0 888 88 55555555555 888888 88 0 2222 22222 0 22222 88 0 888888 0 0 55555 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 55555 88 5 55 0 0000 0 0000 55 555 88 000 0 888888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 4444444 00000000 0 00 0 0 00000 0 0 0 0 0 8 0 88 0 0 0 888 5555 22 22 5 777 5 22 22 2222222222 7 77777 22222222222222 777 0 99 66 0 222 0 0 0 2 99 0 66666666 888 11111 0 2 00000000 0 888 6 0 0 0 1 6666 0000 88 0 888 0 99 2 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATGC-CCT-TCATCA----------A----AATG---A-AT--T--AATGCACCCTC-ATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTTCT----GGGTATAT----AGAAATTTTTTCCC--AATG-GGTATT--------ACATA-TA--TGTCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-TATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCTGTGCGCGTTACATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAA--AACAG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTG---NCT--ATCTGTG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAA-CT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CC--NTTAC-ATTTTTT--C----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATGC-CCT-TCATCA----------A----AATG---A-AT--T--AA-GCAC-----ATTAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CTGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTTATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTTCCCG--GGGTATAT----AGAGATTTTTTTCC-CAATG-GGTATT--------ACATAATA--TGTCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTATTATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTT--G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCNGTGCGNGTCACGTGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAA--AACAG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TNATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTG---NCT--ATCTGTG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG--AAA-CT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CC--NTTAC-ATTTTTT--C----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TAT-A--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-A--TTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAAT-GTTACAA-TAG-GCA-TTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAGA-ACAAGCAAATTCAATGTTTAATT-AAGT----AACCTTTGCATATGTTCCTATTACTA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCCC-AAATG-GGTATTGTTTCACCACATATTGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGATTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGG----GAGAAAAAATTAAAA-TGTGGTTGA--CCGTCAAGATAAACCAAGGT-TAC--GCG-CGATTT-CTTAAAAA---------CCTT--G-CGAGC-GCCCA-TGTTTAAAAAAAACCAAGACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAA-TGCC-GATT-A--AACAGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGA--T-TTATTTGAACTTTCCAAAAAGATCTGT----GCG-AAATTCTCTGGTAGGGGCTATCT-CTTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCC-AATTTC--TTATA--TTTTAACAGGACC-ATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGAATAACA-AAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTGTG-TTCATTTATTC-TTA-CA--TTAGT--AACA---GTAAAACCAAGAA-AT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-C--TTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAA-CT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A--TTTT--C----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-T--TCAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTG--AAA-C--G-CT-A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-ATTTTTT--TTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--------AAT-TTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTT
gi|11 : GCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTG-A-TGCC-GATTAA--A--AG-TGAG-TGGTTTA-GTTTTTTCTA-GTGCG--AATTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TG--AAA-CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT----C-A-AGTTC---CCCTTTTAC-A-TTTTT--C----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG--AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--AT-AC-ATTTTTTTTC----AAA-A-TGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-T--TCAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataA--TGTCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : -AAAAGGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAA-GT-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAAG-ACA-GCAAATTCAATGTT-AATT-AAGTTGTTAACCTT-GCATATGCACCT-TCATCA----------A----AATG-----------------------------------CAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTTCT----GGG-ATAT----AGAGATTTTTTTTTTCAATG-G-TATG--------ACATA-TA--TGTCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAATAT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--A-GCTA--TCGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-G-CGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTG-A-TGCC-GATTAA-----AG-TGAG-T-GTTTA-GTTTTTTCTA-GTGCG--AATTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGG-TGTA-A-TA--GGC-T-------T-AGGTC------TTTATA--TTCGT-AAT----TATT-G---C-AATTT---T-ATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TAACCAT----ATTCA--GA-AGTAACTG------G-AAA-GA--TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCA---C----AC--A---GCAACG-----GGTGACA--TGT----ACT--ATCTGTG-ATCA-TTA-T--CTA-CA--A-AGT--AACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAA-CT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---GC-ATCGTTC---CC--TTTACAATTTTTT--C--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATGC-TACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-A--TTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATTAAAA---GAT-CAT-TCATTTTCA-GAAATA---T-ACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT-TCCTCATACTTAGGATA----AATG---ATATAAT--AATGCACCTTC-ATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTTCT------GTATAT----AGAAATTTTTTC-----ATGAGGTATT--------TCTTAATA--TGATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-TA-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGT-AACC-AGTT-TAC--GC--CGA-GTACC----AA---------CCTTTGG-CGAGC-G-CCA-TGTTA----GAAACAAGGACGG-TGC------TTA-CCGTTTAGTCCACA---GAATCT-GTCGGA--AGGATCGTTCAGA------T---------AA----CA---CCTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAG-ATTGCCTGACTAAATAAAAG-TGAGCTGGTTCATATTATCCTTATGTTCG--AAT-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGC-TGTAGA-TA--TCC-TAAGTATGT-ATGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGA---CAAATTTGACTAATAATTTTT-ACAGAA-TAA--TTC-TTC-CGACCA-TTAACATCATAATTCA--GATAGATACGA------G-AAATGACTTTG--TG-TAC-AAAA-GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GA-GTCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATA--TAT----TCT--GT-TGT--ACCA-TAA-TCACTA-CACCACAGTAAAACCACGATAAA--CCAG-ACATCGCGATA------AC--TTTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TA-GC-A--TCAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GT-AACC-AGTTATACCCGCGGCGA-TT-CT----AAATTCTAAAACGTT--GGCGAGCCG-CCAATGTTT----GAAGCAAGGACGG-TGCAAGTGTTTTTGCGTTTTGTCCACA---GAATCTGGTCGGA-GAGG-------AATCGATAAG---------AA----CA---CCTGTG--GGTCA--TGTA--A-TATTCCAAAGGAAGTTTG-A-TGCC-GATTAA--A-CAG-TGAG-TGGTTTA-ATTTTTTCTG-GTGCG--AATGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGG-TGTA-G-TA--GGCTT-------T-AGGTCT-----TTTATAT-TTCGTAAAT----TATTTG---C-AATTT---TAATA--TTCT-ACAGGA-C-A--TTCTTCA-CG---A-TTACCAC----ATTCA--GA-AGTAACTG------GAAAA-GGC-TTG--TG-TAG-AAAAGGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GA-GT-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACA--TGTG---ACT--ATCTGTGAATCA-TTA-T--CTACCA--AAAGT-AAACC---GTAAA--CAAG-A-AA-TGGA-A------AC--TT---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----C--CTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAA-CT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---GC-C-AATTCG--CC--TTTAC-ATTTTTT--C----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATC--TT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGA-AAA-CT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CC--ATTAC-ATTTTTC--------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TAT-AAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTT--CAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAGT-gtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-TATTTAAATGCT-AGTCT-AAT--TG-C-AA-----TCTA-AT-GCAAC-CCCAAT-GG-A---TC-A---------TCCCATGT-AGT--CTCA------T--CA--TTCCA-TGC------AC--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAA-CT-G-TC-A-ATCACA----T--TATTTTCT-AAT----C-A-AGTTC---CC--A-TAC-ATTTC----------AA-AATTTT---AT-GC-ATGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 1 11111 9999999999999999999999999999999999999999 1111 11 1 1 1 1 1111 1 1 1 111 1 1 11 222 222 1 1 1 1 1 111111111111111111111111111111111111111111111 1 11 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 11 1 1 11 33333 1 1111 1 1 1 1 11 11 444444444444444444 11 1 111 22222 111 8888888888888888888888888888888888 111 22222222 1 44444 11 22222 11 11 4444444 1 111 11 333333333 1 333333 22 1 2222 222 22222 11 1 2 11 1 1 111 1 2222 11 1 22222222 1 11 11 1 111 11 11 55555555555555555 22222 11 33333 11 11 1 22 111 2222 11 111 11 11111 1 444444444444444444444 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 1111111 11111111 11 22222 1 111 1111 111 2222222222 11111 22222222222222 111 1 111 22222222 111111111 111 222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 5 88888 3 8888888888888888888888888888888888888888 3 4444 33 55 0 0 8 6 0 0 4444 0 3 7 3 999 3 3 7 44 333 7 6 7 7 7 000 2 3 3 7 3 7 3 555555555555555555555555555555555555555555555 0 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 0 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 33 0 0 33 00000 0 2 2 3 3 7777 2 2 0 8 7 0 0 0 33 22 888888888888888888 99 0 111 55555 2 8 88 8 444 8 3333333333333333333333333333333333 8 444 00000000 8 99 0 5 6 8 22222 8 8 0 8 8 11 8 99999 11 0 11 2 3 8888888 3 2 4 0 444 33 333333333 0 444444 33 0 1111 8 777 88888 33 0 0 33 0 0 777 0 1111 33 0 66 99999999 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 33333 33 2 22 0 99 111 2222 33 3 777 33 88888 0 777777777777777777777 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 7777777 44444444 8 11 8 8 00000 8 8 8 8 8 0 8 88 8 0 8 111 2222 99 99 7 111 3 99 99 9999999999 6 66666 66666666666666 111 5 66 1 0 222 5 5 5 3 66 5 11111111 333333333 5 000 111111 5 888 5 5 5 5 4 0000 66 5 33 0 5 222 5 66 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... . ..... . ........................................ . .... .. .. . . . . . . .... . . . . ... . . . .. ... . . . . . ... . . . . . . . ............................................. . . .. . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .. . . .. ..... . . . . . .... . . . . . . . . .. .. .................. .. . ... ..... . . .. . ... . .................................. . ... ........ . .. . . . . ..... . . . . . .. . ..... .. . .. . . ....... . . . . ... .. ......... . ...... .. . .... . ... ..... .. . . .. . . ... . .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. ..... .. . .. . .. ... .... .. . ... .. ..... . ..................... . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ....... ........ . .. . . ..... . . . . . . . .. . . . ... .... .. .. . ... . .. .. .......... . ..... .............. ... . .. . . ... . . . . .. . ........ ......... . ... ...... . ... . . . . . .... .. . .. . . ... . .. . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 0 55555 2 5555555555555555555555555555555555555555 2 8888 88 88 0 0 8 5 0 0 8888 0 3 3 3 777 3 3 3 00 333 3 7 3 3 3 777 0 3 3 3 3 3 3 000000000000000000000000000000000000000000000 7 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 7 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 22 0 0 88 00000 0 5 5 2 2 2222 5 5 0 8 0 0 0 0 88 55 000000000000000000 22 0 000 00000 5 0 88 0 000 8 8888888888888888888888888888888888 0 000 66666666 0 44 8 6 0 0 00000 0 0 8 0 0 00 8 00000 00 8 00 5 2 2222222 2 5 2 0 888 88 555555555 0 888888 88 0 2222 8 555 22222 88 0 0 88 0 0 555 0 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 55555 88 5 55 0 00 000 0000 22 2 555 88 55555 0 888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 4444444 00000000 0 00 0 0 00000 0 0 0 0 0 8 0 88 0 0 0 888 5555 22 22 5 777 5 22 22 2222222222 7 77777 22222222222222 777 0 99 2 1 555 0 0 0 2 99 0 66666666 999999999 0 111 222222 0 888 6 0 0 0 1 6666 99 0 88 1 0 888 0 99 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATGC--CT-TC-CCA----------A----AATG---A-AT--T--AATGCACCTT-CATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAA--A-CAGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTGTG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATGC-CCT-TCATCA----------A----AATG---A-AT--T--AATGCACCCT-CATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CTGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGCGCGTTACATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAA--AACAGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGN---CTA--TCTGTG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TAT-A--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-A--TTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAAT-GTTACAA-TAG-GCA-TTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAGA-ACAAGCAAATTCAATGTTTAATT-AAGT----AACCTTTGCATATGTTCCTATTACTA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGGG----AGAAAAAATTAAAA-TGTGGTTGAC-C-GTCAAGATAAACCAAGGT-TAC--GCG-CGATTTCTTAAAAA---------CCTT--GCGAGC-GCCCA-TGTTTAAAAAAAACCAAG-ACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAATGCC-GATTAA--A-CAGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGATTT---ATTTGAACTTTCCAAAAAGATCTGT--G--CGAAA-TTCTCTGGTAGGGGCTATCTC-TTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCCAATTTC--TTATA--TTTTAACAGGACCATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGA-ATAACAAAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTGTG-TTCATTTATT-CTTA-CA--TTAGT-AA-CA---GTAAAACCAAGA-AAT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-C--TTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A----TTTTC----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-TT--CAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-A--TTTTTTTTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--A-A-----T-TTT--TT-TTATTAATTCAAA-TCAA-TG-GTGTTCCTT
gi|11 : -GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTGA-TGCC-GATTAA--A--AGT-GAG-TGGTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT-----CA-AGTTC---CCCTTTTAC-A---TTTTTC----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTTT--CAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG-AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--A-TAC-ATTTTTTTTC-----AA-AATGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-TT--CAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : AAAA-GGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAAG-T-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAAG-ACA-GCAAATTCAATGTT-AATT-AAGTTGTTAACCTT-GCATATGC-----------------------------------------------ACCTT-CATCAAAA--TGCAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--AG-CTAT--CGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTGA-TGCC-GATTAA-----AGT-GAG-T-GTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGGT-GTA-A-TA--GGC-T-------TA-GGTC------TTTATA--TTCGT-AAT----TATT-GC---AATTT---T-ATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATA-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GA--TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCA---C----AC--A---GCAACG-----GGTGACAT--GT-A---CTA--TCTGTG-ATCATT-AT--CT-A-CA--A-AGT--AACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---G-CATCGTTC---CC--TTTACAA--TTTTTTC--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATGC-TACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-A--TTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATTAAAA---GAT-CAT-TCATTTTCA-GAAATA---T-ACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT-TCCTCATACTTAGGATA----AATG---ATATAAT--AATGCACCTT-CATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGTAA-CCA-GTT-TAC--GC--CGAGTACC----AA---------CCTTTGGCGAGC-GCC-A-TGTTAGAAA-----CAAGGACGGT-GC------TTA-CCGTTTAGTCCACAGA---ATCT-GTCGGA--AGGATCGTTCAGA------T------------AAC-AC---CTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAGATTGCCTGACTAAATAAAAGT-GAGCTGGTTCATATTATCCTTATGTTCGAA--T-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGCT-GTAGA-TA--TCC-TAAGTATGTA-TGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGACA--AATTTGACTAATAATTTTTA-CAGAATAAT--TC-TTCC-GACCATT-AACATCATAATTCA--GATAGATACGAG-A------AATGACTTTGT--G-TACAAAA--GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GAG-TCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATAT--AT-T---CTG--T-TGT--ACCATA-ATCACT-A-CACCACAGTAAAACCACGATAAA--CCAGACA-TCGCGATAA------CT--TTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TAG-C-AT--CAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GTAA-CCA-GTTATACCCGCGGCGATT-CT----AAATTCTAAAACGTTG-GCGAGCCGCC-AATGTTTGAAG-----CAAGGACGGT-GCAAGTGTTTTTGCGTTTTGTCCACAGA---ATCTGGTCGGA-GAGG-------AATCGATAAG------------AAC-AC---CTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTGA-TGCC-GATTAA--A-CAGT-GAG-TGGTTTA-ATTTTTTCTG-GTGCGAA--TGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGGT-GTA-G-TA--GGCTT-------TA-GGTCT-----TTTATAT-TTCGTAAAT----TATTTGC---AATTT---TAATA--TTCTA-CAGGAC-AT--TCTTCAC-G---ATT-ACCAC----ATTCA--GA-AGTAACTGGAA------AA-GGC-TTGT--G-TAGAAAA-GGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GAG-T-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACAT--GTGA---CTA--TCTGTGAATCATT-AT--CT-ACCA--AAAGT-AAACC---GTAAA--CAAGA-A-A-TGGA-AA------CT--T---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----C--CTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---G-CC-AATTCG--CC--TTTAC-A--TTTTTTC----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-TT--CAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATC--TT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--ATTAC-A--TTTTTC------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TAT-AAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTT--CAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAGT-gtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-TATTTAAATGCT-AGTCT-AAT--TG-C-AA-----TCTA-AT-GCAAC-CCCAAT-GG-A---TC-A---------TCCCATGT-AGT--CTCA------T--CA--TTCCA-TGC------AC--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT-----CA-AGTTC---CC--A-TAC-A--TTTC--------AA-AATTTT---AT-GC-ATGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-TT--CAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 2222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 1 11111 9999999999999999999999999999999999999999 1111 11 1 1 1 1 1111 1 1 1 111 1 1 11 222 222 1 1 1 1 1 1111111111111111111111111111111111111111111111 1 11 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 1111 1111 33333 1 1111 11 1 1 1 11 11 1 1 444444444444444 1 1 1 1 2222 1 111 888888888888888888888888888888888888888888 11111111 22222 11 11111 11 11 4444444 1 111 11 33333333333 333333 22 1 2222 22222 1 22222 11 1 111111 1 1 11111 2222 11 1 33333333 1 11 11 1 111 11 11 55555555555555555 22222 11 444444444 1 2 1 2222 1 2222 22 111 11 111 1 333333333333333333333333 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 444444444444444 11 22222222 1 1111 111 1111 11111 2222222222 11111 22222222222222 111 1 111 22222222 111 11111 111 222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 5 88888 3 8888888888888888888888888888888888888888 3 4444 33 55 0 0 8 6 0 0 4444 0 3 7 3 999 3 3 7 44 333 7 6 7 7 7 000 2 3 3 7 3 7 3 6666666666666666666666666666666666666666666666 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 0 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 0 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 4444 4444 00000 0 2 2 3 3 7777 2 2 22 7 0 0 0 33 22 0 0 333333333333333 3 0 0 0 0 1111 0 88 8 444 8 555555555555555555555555555555555555555555 66666666 8 99 0 5 8 8 8 33333 8 8 0 8 8 11 8 0 44444 11 0 11 55 8888888 3 2 4 0 444 33 44444444444 444444 33 0 1111 00000 0 88888 33 0 888888 0 0 88888 1111 33 0 66 22222222 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 000000000 0 0 0 6666 0 2222 55 777 33 111 0 999999999999999999999999 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 999999999999999 8 11 8 00000000 8 6 8 8 8 8 8 8 2222 8 111 2222 99 99 7 44444 99 99 9999999999 6 66666 66666666666666 111 5 66 1 0 222 5 5 5 3 66 5 11111111 333 00000 5 000 111111 5 888 5 5 5 5 4 0000 66 5 33 0 5 222 5 66 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... . ..... . ........................................ . .... .. .. . . . . . . .... . . . . ... . . . .. ... . . . . . ... . . . . . . . .............................................. . .. . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... . ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .... .... ..... . . . . . .... . . .. . . . . .. .. . . ............... . . . . . .... . .. . ... . .......................................... ........ . .. . . . . . ..... . . . . . .. . . ..... .. . .. .. ....... . . . . ... .. ........... ...... .. . .... ..... . ..... .. . ...... . . ..... .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. ......... . . . .... . .... .. ... .. ... . ........................ . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ............... . .. . ........ . . . . . . . . .... . ... .... .. .. . ..... .. .. .......... . ..... .............. ... . .. . . ... . . . . .. . ........ ... ..... . ... ...... . ... . . . . . .... .. . .. . . ... . .. . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 0 55555 2 5555555555555555555555555555555555555555 2 8888 88 88 0 0 8 5 0 0 8888 0 3 3 3 777 3 3 3 00 333 3 7 3 3 3 777 0 3 3 3 3 3 3 7777777777777777777777777777777777777777777777 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 7 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 7 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 2222 8888 00000 0 5 5 2 2 2222 5 5 55 0 0 0 0 88 55 0 0 222222222222222 2 0 0 0 0 2222 0 88 0 000 8 222222222222222222222222222222222222222222 22222222 0 44 8 6 0 0 0 00000 0 0 8 0 0 00 8 8 44444 00 8 00 88 2222222 2 5 2 0 888 88 55555555555 888888 88 0 2222 22222 0 22222 88 0 888888 0 0 55555 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 222222222 0 0 0 0000 0 0000 55 555 88 000 0 888888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 222222222222222 0 00 0 22222222 0 0 0 0 0 0 0 0 0000 0 888 5555 22 22 5 22222 22 22 2222222222 7 77777 22222222222222 777 0 99 2 1 555 0 0 0 2 99 0 66666666 888 11111 0 111 222222 0 888 6 0 0 0 1 6666 99 0 88 1 0 888 0 99 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATG--CCT--T-C-CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGC---AGAAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-CTTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TAT-A--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAAG-ACA-GCAAATTCAATGTTTAATT-AAGTTGTTAACCTT-GCATATG--CCT--TCC-CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGC---AGAAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-CTTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TAT-A--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-A--TTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAAT-GTTACAA-TAG-GCA-TTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAGA-ACAAGCAAATTCAATGTTTAATT-AAGT----AACCTTTGCATATGTTCCTATTAC-TA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGG----GAGAAAAAATTAAAA-TGTGGTTGA--CCGTCAAGATAAACCAAGGT-TAC--GCG-CGATTT-CTTAAAAA---------CC-TT-GCGAGC-GCCCA-TGTTTAAAAAAAACCAAGACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAA-TGCC-GATTAAAC---AGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGA--T-TTATTTGAACTTTCCAAAAAGATCTGT----GCG-AAATTCTCTGGTAGGGGCTATCT-CTTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCC-AATTTC--TTATA--TTTTAACAGGACC-ATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGAATAACA-AAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTG-TG-TTCATTTATTC-TTA-CA--TTAGT--AACA---GTAAAACCAAGAA-AT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-CTTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCAT--TCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A----TTTTC----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-TT--CAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-A--TTTTTTTTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--A-A-----T-TTT--TT-TTATTAATTCAAA-TCAA-TG-GTGTTCCTT
gi|11 : GCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTG-A-TGCC-GATTAAA----AG-TGAG-TGGTTTA-GTTTTTTCTA-GTGCG--AATTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT-----CA-AGTTC---CCCTTTTAC-A---TTTTTC----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTTT--CAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG-AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--A-TAC-ATTTTTTTTC-----AA-AATGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-TT--CAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : -AAAAGGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAA-GT-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-A--TTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAAT-GTTACAA-TATTGCA-TTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAAG-ACA-GCAAATTCAATGTT-AATT-AAGTTGTTAACCTT-GCATATG--C----------------------------------------------ACC-TTCATCAAAA--TGCAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--A-GCTA--TCGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTG-A-TGCC-GATTAA-----AG-TGAG-T-GTTTA-GTTTTTTCTA-GTGCG--AATTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGG-TGTA-A-TA--GGC-T-------T-AGGTC------TTTATA--TTCGT-AAT----TATT-G---C-AATTT---T-ATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TAACCAT----ATTCA--GA-AGTAACTG------G-AAA-GA--TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCA---C----AC--A---GCAACG-----GGTGACA--TGT-A---CT--ATCTG-TG-ATCA-TTA-T--CTA-CA--A-AGT--AACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGC---AGAAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-CTTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-AT--T-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---G-CATCGTTC---CC--TTTACAA--TTTTTTC--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATGC-TACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-A--TTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATTAAAA---GAT-CAT-TCATTTTCA-GAAATA---T-ACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT--TCCTCATACTTAGGATA----AATG---ATATAAT--AATGCACC-TTCATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGT-AACC-AGTT-TAC--GC--CGA-GTACC----AA---------CCTTTGGCGAGC-G-CCA-TGTTA----GAAACAAGGACGG-TGC------TTA-CCGTTTAGTCCACA---GAATCT-GTCGGA--AGGATCGTTCAGA------T---------AA----CA---CCTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAG-ATTGCCTGACTAAATAAAAG-TGAGCTGGTTCATATTATCCTTATGTTCG--AAT-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGC-TGTAGA-TA--TCC-TAAGTATGT-ATGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGA---CAAATTTGACTAATAATTTTT-ACAGAA-TAA--TTC-TTC-CGACCA-TTAACATCATAATTCA--GATAGATACGA------G-AAATGACTTTG--TG-TAC-AAAA-GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GA-GTCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATA--TAT----------TCTGTTGTACCA-TAA-TCACTA-CACCACAGTAAAACCACGATAAA--CCAG-ACATCGCGATA------AC--TTTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TA-GC-A--TCAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GT-AACC-AGTTATACCCGCGGCGA-TT-CT----AAATTCTAAAACGTTG-GCGAGCCG-CCAATGTTT----GAAGCAAGGACGG-TGCAAGTGTTTTTGCGTTTTGTCCACA---GAATCTGGTCGGA-GAGG-------AATCGATAAG---------AA----CA---CCTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTG-GTGCG--AATGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGG-TGTA-G-TA--GGCTT-------T-AGGTCT-----TTTATAT-TTCGTAAAT----TATTTG---C-AATTT---TAATA--TTCT-ACAGGA-C-A--TTCTTCA-CG---A-TTACCAC----ATTCA--GA-AGTAACTG------GAAAA-GGC-TTG--TG-TAG-AAAAGGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GA-GT-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACA--TGTGA---CT--ATCTG-TGAATCA-TTA-T--CTACCA--AAAGT-AAACC---GTAAA--CAAG-A-AA-TGGA-A------AC--TT---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGC---AGAAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----CCTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-AT--T-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---G-CC-AATTCG--CC--TTTAC-A--TTTTTTC----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-TT--CAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATCTT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--ATTAC-A--TTTTTC------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TAT-AAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTT--CAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAGT-gtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGC---AGAAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-T-----------ATTT-AAA--TG-CTAG-----TCTA-ATTGCAA--TCTAAT-GC-AACCCC-AA-TGG--ATCATCCCATGT-AGT--CTCA------T--CA--TTCCA-TGCA------C--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT-----CA-AGTTC---CC--AT-AC-A--TTTC--------AA-AATTTT---ATG-CA-TGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-TT--CAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 11111 9999999999999999999999999999999999999999 2222 1 1 1 1 1111 1 1 1 1 1 1 3333 222 1 1 1 1 1 22222222222222222222222222222222222222222222222 1 11 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 1111 1111 33333 1 1111 11 1 1 1 11 11 1 1 444444444444444 1 1 1 1 2222 1 111 888888888888888888888888888888888888888888 11111111 22222 11 11111 11 11 4444444 1 111 11 33333333333 333333 22 1 2222 22222 1 22222 11 1 111111 1 1 11111 2222 11 1 33333333 1 11 11 1 111 11 11 55555555555555555 22222 11 444444444 1 2 1 2222 1 2222 22 111 11 111 1 333333333333333333333333 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 1111111 11111111 11 22222 1 111 1111 111 2222222222 11111 22222222222222 111 1 111 22222222 111111111 111 222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 55 88888 3 8888888888888888888888888888888888888888 3 8888 55 0 0 8 6 0 0 4444 0 3 7 3 7 3 3 3 7 7 6 0000 6 7 7 7 000 2 3 3 7 3 7 3 88888888888888888888888888888888888888888888888 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 0 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 0 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 4444 4444 00000 0 2 2 3 3 7777 2 2 22 7 0 0 0 33 22 0 0 333333333333333 3 0 0 0 0 1111 0 88 8 444 8 555555555555555555555555555555555555555555 66666666 8 99 0 5 8 8 8 33333 8 8 0 8 8 11 8 0 44444 11 0 11 55 8888888 3 2 4 0 444 33 44444444444 444444 33 0 1111 00000 0 88888 33 0 888888 0 0 88888 1111 33 0 66 22222222 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 000000000 0 0 0 6666 0 2222 55 777 33 111 0 999999999999999999999999 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 7777777 44444444 8 11 8 8 00000 8 8 8 8 8 0 8 88 8 0 8 111 2222 99 99 7 111 3 99 99 9999999999 6 66666 66666666666666 111 5 66 1 0 222 5 5 5 3 66 5 11111111 333333333 5 000 111111 5 888 5 5 5 5 4 0000 66 5 33 0 5 222 5 66 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... .. ..... . ........................................ . .... .. . . . . . . .... . . . . . . . . . . . .... . . . . ... . . . . . . . ............................................... . .. . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... . ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .... .... ..... . . . . . .... . . .. . . . . .. .. . . ............... . . . . . .... . .. . ... . .......................................... ........ . .. . . . . . ..... . . . . . .. . . ..... .. . .. .. ....... . . . . ... .. ........... ...... .. . .... ..... . ..... .. . ...... . . ..... .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. ......... . . . .... . .... .. ... .. ... . ........................ . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ....... ........ . .. . . ..... . . . . . . . .. . . . ... .... .. .. . ... . .. .. .......... . ..... .............. ... . .. . . ... . . . . .. . ........ ......... . ... ...... . ... . . . . . .... .. . .. . . ... . .. . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 00 55555 2 5555555555555555555555555555555555555555 2 5555 88 0 0 8 5 0 0 8888 0 3 3 3 3 3 3 3 3 3 7 7777 7 3 3 3 777 0 3 3 3 3 3 3 33333333333333333333333333333333333333333333333 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 7 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 7 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 2222 8888 00000 0 5 5 2 2 2222 5 5 55 0 0 0 0 88 55 0 0 222222222222222 2 0 0 0 0 2222 0 88 0 000 8 222222222222222222222222222222222222222222 22222222 0 44 8 6 0 0 0 00000 0 0 8 0 0 00 8 8 44444 00 8 00 88 2222222 2 5 2 0 888 88 55555555555 888888 88 0 2222 22222 0 22222 88 0 888888 0 0 55555 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 222222222 0 0 0 0000 0 0000 55 555 88 000 0 888888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 4444444 00000000 0 00 0 0 00000 0 0 0 0 0 8 0 88 0 0 0 888 5555 22 22 5 777 5 22 22 2222222222 7 77777 22222222222222 777 0 99 2 1 555 0 0 0 2 99 0 66666666 999999999 0 111 222222 0 888 6 0 0 0 1 6666 99 0 88 1 0 888 0 99 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-A--TTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTCGGACGAGG-------AGN------G---------AA----CA---CCTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGC-T-------T-AGGTCT-----TTTATA--TTCGT-AAT----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------G-AAA-GAC-TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-ATCA-TTA-TC-CTA-CA--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-TT--CAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TA-TA--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-A--TTTCAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAA-TGTTAC-AATAG-GC-ATTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAG-AACAAGCAAATTCAATGTTTAA-TTAAGT----AACCTTTGCATATGTTCCTATTAC--TA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGG----GAGAAAAAATTAAAA-TGTGGTTGA--CCGTCAAGATAAACCAAGGT-TAC--GCG-CGATTT-CTTAAAAA---------CC-TT-GCGAGC-GCCCA-TGTTTAAAAAAAACCAAGACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAA-TGCC-GATTAAAC---AGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGA--T-TTATTTGAACTTTCCAAAAAGATCTGT----GCG-AAATTCTCTGGTAGGGGCTATCT-CTTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCC-AATTTC--TTATA--TTTTAACAGGACC-ATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGAATAACA-AAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTG-TG-TTCATTTATTC-TTA-CA--TTAGT--AACA---GTAAAACCAAGAA-AT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-C--TTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A----TTTTC----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-TT--CAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-A--TTTTTTTTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--A-A-----T-TTT--TT-TTATTAATTCAAA-TCAA-TG-GTGTTCCTT
gi|11 : GCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTG-A-TGCC-GATTAAA----AG-TGAG-TGGTTTA-GTTTTTTCTA-GTGCG--AATTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT-----CA-AGTTC---CCCTTTTAC-A---TTTTTC----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTTT--CAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG-AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--A-TAC-ATTTTTTTTC-----AA-AATGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-TT--CAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : -AAAAGGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAA-GT-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-A--TTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAA-GACA-GCAAATTCAATGTT-AA-TTAAGTTGTTAACCTT-GCATATG--C-----------------------------------------------ACC-TTCATCAAAA--TGCAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--A-GCTA--TCGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNNNNNNNNNN-------NNN------N---------NN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTG-A-TGCC-GATTAA-----AG-TGAG-T-GTTTA-GTTTTTTCTA-GTGCG--AATTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGG-TGTA-A-TA--GGC-T-------T-AGGTC------TTTATA--TTCGT-AAT----TATT-G---C-AATTT---T-ATA--TTTT-ACAGGA-C-A--TTC-TCA-CG---A-TAACCAT----ATTCA--GA-AGTAACTG------G-AAA-GA--TTG--TG-TAG-AAAAGGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GA-GT-CTG--ATCA---C----AC--A---GCAACG-----GGTGACA--TGT-A---CT--ATCTG-TG-ATCA-TTA-T--CTA-CA--A-AGT--AACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---G-CATCGTTC---CC--TTTACAA--TTTTTTC--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATG-CTACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-ATTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATT--AAAA-GAT-CAT-TCATTTTC-AGAAATA----TACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT--T-CCTCATACTTAGGATA----AATG---ATATAAT--AATGCACC-TTCATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGT-AACC-AGTT-TAC--GC--CGA-GTACC----AA---------CCTTTGGCGAGC-G-CCA-TGTTA----GAAACAAGGACGG-TGC------TTA-CCGTTTAGTCCACA---GAATCT-GTCGGA--AGGATCGTTCAGA------T---------AA----CA---CCTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAG-ATTGCCTGACTAAATAAAAG-TGAGCTGGTTCATATTATCCTTATGTTCG--AAT-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGC-TGTAGA-TA--TCC-TAAGTATGT-ATGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGA---CAAATTTGACTAATAATTTTT-ACAGAA-TAA--TTC-TTC-CGACCA-TTAACATCATAATTCA--GATAGATACGA------G-AAATGACTTTG--TG-TAC-AAAA-GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GA-GTCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATA--TAT----------TCTGTTGTACCA-TAA-TCACTA-CACCACAGTAAAACCACGATAAA--CCAG-ACATCGCGATA------AC--TTTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TA-GC-A--TCAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GT-AACC-AGTTATACCCGCGGCGA-TT-CT----AAATTCTAAAACGTTG-GCGAGCCG-CCAATGTTT----GAAGCAAGGACGG-TGCAAGTGTTTTTGCGTTTTGTCCACA---GAATCTGGTCGGA-GAGG-------AATCGATAAG---------AA----CA---CCTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTG-A-TGCC-GATTAAAC---AG-TGAG-TGGTTTA-ATTTTTTCTG-GTGCG--AATGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGG-TGTA-G-TA--GGCTT-------T-AGGTCT-----TTTATAT-TTCGTAAAT----TATTTG---C-AATTT---TAATA--TTCT-ACAGGA-C-A--TTCTTCA-CG---A-TTACCAC----ATTCA--GA-AGTAACTG------GAAAA-GGC-TTG--TG-TAG-AAAAGGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GA-GT-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACA--TGTGA---CT--ATCTG-TGAATCA-TTA-T--CTACCA--AAAGT-AAACC---GTAAA--CAAG-A-AA-TGGA-A------AC--TT---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----C--CTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---G-CC-AATTCG--CC--TTTAC-A--TTTTTTC----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-TT--CAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATC--TT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--ATTAC-A--TTTTTC------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-TT--CAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TA-TAAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTTCAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAG-Tgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-TATTTAAATGCT-AGTCT-AAT--TG-C-AA-----TCTA-AT-GCAAC-CCCAAT-GG-A---TC-A---------TCCCATGT-AGT--CTCA------T--CA--TTCCA-TGC------AC--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT-----CA-AGTTC---CC--A-TAC-A--TTTC--------AA-AATTTT---AT-GC-ATGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-TT--CAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 11111 9999999999999999999999999999999999999999 1 11 1 1 1 1 1111 1 1 1 1 1 1 3333 222 1 1 1 1 1 22222222222222222222222222222222222222222222222 1 11 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 11 1 1 11 33333 1 1111 1 1 1 1 11 11 444444444444444444 11 1 111 22222 111 8888888888888888888888888888888888 111 11111111 1 22222 11 22222 11 11 4444444 1 111 11 333333333 1 333333 22 1 2222 222 22222 11 1 2 11 1 1 111 1 2222 11 1 22222222 1 11 11 1 111 11 11 55555555555555555 22222 11 3333333333 1 2 1 22 111 2222 11 111 11 11111 1 444444444444444444444 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 1111111 11111111 11 22222 1 111 1111 111 2222222222 11111 22222222222222 111 1 111 22222222 111111111 111 222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 55 88888 3 8888888888888888888888888888888888888888 3 0 88 55 0 0 8 6 0 0 4444 0 3 7 3 7 3 3 3 7 7 6 0000 6 7 7 7 000 2 3 3 7 3 7 3 88888888888888888888888888888888888888888888888 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 0 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 0 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 33 0 0 33 00000 0 2 2 3 3 7777 2 2 0 8 7 0 0 0 33 22 888888888888888888 99 0 111 55555 2 8 88 8 444 8 3333333333333333333333333333333333 8 444 66666666 8 99 0 5 6 8 33333 8 8 0 8 8 11 8 99999 11 0 11 2 3 8888888 3 2 4 0 444 33 333333333 0 444444 33 0 1111 8 777 88888 33 0 0 33 0 0 777 0 1111 33 0 66 99999999 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 7777777777 0 0 0 99 111 2222 33 3 777 33 88888 0 777777777777777777777 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 7777777 44444444 8 11 8 8 00000 8 8 8 8 8 0 8 88 8 0 8 111 2222 99 99 7 111 3 99 99 9999999999 6 66666 66666666666666 111 5 66 1 0 222 5 5 5 3 66 5 11111111 333333333 5 000 111111 5 888 5 5 5 5 4 0000 9999 33 5 222 5 66 3 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... .. ..... . ........................................ . . .. .. . . . . . . .... . . . . . . . . . . . .... . . . . ... . . . . . . . ............................................... . .. . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... . ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .. . . .. ..... . . . . . .... . . . . . . . . .. .. .................. .. . ... ..... . . .. . ... . .................................. . ... ........ . .. . . . . ..... . . . . . .. . ..... .. . .. . . ....... . . . . ... .. ......... . ...... .. . .... . ... ..... .. . . .. . . ... . .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. .......... . . . .. ... .... .. . ... .. ..... . ..................... . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ....... ........ . .. . . ..... . . . . . . . .. . . . ... .... .. .. . ... . .. .. .......... . ..... .............. ... . .. . . ... . . . . .. . ........ ......... . ... ...... . ... . . . . . .... .... .. . ... . .. . . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 00 55555 2 5555555555555555555555555555555555555555 2 0 55 88 0 0 8 5 0 0 8888 0 3 3 3 3 3 3 3 3 3 7 7777 7 3 3 3 777 0 3 3 3 3 3 3 33333333333333333333333333333333333333333333333 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 7 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 7 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 22 0 0 88 00000 0 5 5 2 2 2222 5 5 0 8 0 0 0 0 88 55 000000000000000000 22 0 000 00000 5 0 88 0 000 8 8888888888888888888888888888888888 0 000 22222222 0 44 8 6 0 0 00000 0 0 8 0 0 00 8 00000 00 8 00 5 2 2222222 2 5 2 0 888 88 555555555 0 888888 88 0 2222 8 555 22222 88 0 0 88 0 0 555 0 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 2222222222 0 0 0 00 000 0000 22 2 555 88 55555 0 888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 4444444 00000000 0 00 0 0 00000 0 0 0 0 0 8 0 88 0 0 0 888 5555 22 22 5 777 5 22 22 2222222222 7 77777 22222222222222 777 0 99 2 1 555 0 0 0 2 99 0 66666666 999999999 0 111 222222 0 888 6 0 0 0 1 6666 0000 88 0 888 0 99 2 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TA-TA--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-ATTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAA-TGTTAC-AATAG-GC-ATTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAG-AACAAGCAAATTCAATGTTTAA-TTAAGT----AACCTTTGCATATGTTCCTATTAC--TA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGGG----AGAAAAAATTAAAA-TGTGGTTGAC-C-GTCAAGATAAACCAAGGT-TAC--GCG-CGATTTCTTAAAAA---------CCTT--GCGAGC-GCCCA-TGTTTAAAAAAAACCAAG-ACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAATGCC-GATTAAAC---AGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGATTT---ATTTGAACTTTCCAAAAAGATCTGT--G--CGAAA-TTCTCTGGTAGGGGCTATCTC-TTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCCAATTTC--TTATA--TTTTAACAGGACCATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGA-ATAACAAAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTG-TG-TTCATTTATT-CTTA-CA--TTAGT-AA-CA---GTAAAACCAAGA-AAT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-C--TTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A----TTTTC----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-T--TCAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-A--TTTTTTTTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--------AAT-TTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTT
gi|11 : -GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTGA-TGCC-GATTAAA----AGT-GAG-TGGTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT-----CA-AGTTC---CCCTTTTAC-A---TTTTTC----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG-AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--A-TAC-ATTTTTTTTC-----AA-AATGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-T--TCAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : AAAA-GGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAAG-T-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-ATTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAA-GACA-GCAAATTCAATGTT-AA-TTAAGTTGTTAACCTT-GCATATG--C-----------------------------------------------ACC-TTCATCAAAA--TGCAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--AG-CTAT--CGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTGA-TGCC-GATTAA-----AGT-GAG-T-GTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGGT-GTA-A-TA--GGC-T-------TA-GGTC------TTTATA--TTCGT-AAT----TATT-GC---AATTT---T-ATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATA-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GA--TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCA---C----AC--A---GCAACG-----GGTGACAT--GT-A---CTA--TCTG-TG-ATCATT-AT--CT-A-CA--A-AGT--AACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---G-CATCGTTC---CC--TTTACAA--TTTTTTC--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATG-CTACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-ATTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATT--AAAA-GAT-CAT-TCATTTTC-AGAAATA----TACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT--T-CCTCATACTTAGGATA----AATG---ATATAAT--AATGCACC-TTCATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGTAA-CCA-GTT-TAC--GC--CGAGTACC----AA---------CCTTTGGCGAGC-GCC-A-TGTTAGAAA-----CAAGGACGGT-GC------TTA-CCGTTTAGTCCACAGA---ATCT-GTCGGA--AGGATCGTTCAGA------T------------AAC-AC---CTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAGATTGCCTGACTAAATAAAAGT-GAGCTGGTTCATATTATCCTTATGTTCGAA--T-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGCT-GTAGA-TA--TCC-TAAGTATGTA-TGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGACA--AATTTGACTAATAATTTTTA-CAGAATAAT--TC-TTCC-GACCATT-AACATCATAATTCA--GATAGATACGAG-A------AATGACTTTGT--G-TACAAAA--GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GAG-TCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATAT--AT----------TCTGTTGTACCATA-ATCACT-A-CACCACAGTAAAACCACGATAAA--CCAGACA-TCGCGATAA------CT--TTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TAG-C-AT--CAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GTAA-CCA-GTTATACCCGCGGCGATT-CT----AAATTCTAAAACGTTG-GCGAGCCGCC-AATGTTTGAAG-----CAAGGACGGT-GCAAGTGTTTTTGCGTTTTGTCCACAGA---ATCTGGTCGGA-GAGG-------AATCGATAAG------------AAC-AC---CTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTG-GTGCGAA--TGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGGT-GTA-G-TA--GGCTT-------TA-GGTCT-----TTTATAT-TTCGTAAAT----TATTTGC---AATTT---TAATA--TTCTA-CAGGAC-AT--TCTTCAC-G---ATT-ACCAC----ATTCA--GA-AGTAACTGGAA------AA-GGC-TTGT--G-TAGAAAA-GGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GAG-T-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACAT--GTGA---CTA--TCTG-TGAATCATT-AT--CT-ACCA--AAAGT-AAACC---GTAAA--CAAGA-A-A-TGGA-AA------CT--T---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----C--CTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---G-CC-AATTCG--CC--TTTAC-A--TTTTTTC----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATC--TT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--ATTAC-A--TTTTTC------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TA-TAAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTTCAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAG-Tgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-TATTTAAATGCT-AGTCT-AAT--TG-C-AA-----TCTA-AT-GCAAC-CCCAAT-GG-A---TC-A---------TCCCATGT-AGT--CTCA------T--CA--TTCCA-TGC------AC--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT-----CA-AGTTC---CC--A-TAC-A--TTTC--------AA-AATTTT---AT-GC-ATGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 11111 9999999999999999999999999999999999999999 1 11 1 1 1 1 1111 1 1 1 1 1 1 3333 222 1 1 1 1 1 22222222222222222222222222222222222222222222222 1 11 1 11 1 222 1 11 33333 1 11 11 44444444444 111 444444444 22 222 2222 1111 22 11 3333 1 1 333333 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 11 1 1 11 33333 1 1111 1 1 1 1 11 11 444444444444444444 11 1 111 22222 111 8888888888888888888888888888888888 111 11111111 1 22222 11 22222 11 11 4444444 1 111 11 333333333 1 333333 22 1 2222 222 22222 11 1 2 11 1 1 111 1 2222 11 1 22222222 1 11 11 1 111 11 11 55555555555555555 22222 11 3333333333 1 2 1 22 111 2222 11 111 11 11111 1 444444444444444444444 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 1 1 11 1111 111 22 1 1 1 11111 1 2 11 22222 1 1 22222 1 444444444 1 1 222 11 111111111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 1111 1111111 11111111 11 22222 1 111 1111 111 2222222222 11111 22222222222222 111 1 111 22222222 111111111 111 222222 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 55 88888 3 8888888888888888888888888888888888888888 3 0 88 55 0 0 8 6 0 0 4444 0 3 7 3 7 3 3 3 7 7 6 0000 6 7 7 7 000 2 3 3 7 3 7 3 88888888888888888888888888888888888888888888888 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 44444444444 333 777777777 6 00 22 333 7777 3333 7 00 7 11 0000 7 3 0 3 888888 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 0 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 33 0 0 33 00000 0 2 2 3 3 7777 2 2 0 8 7 0 0 0 33 22 888888888888888888 99 0 111 55555 2 8 88 8 444 8 3333333333333333333333333333333333 8 444 66666666 8 99 0 5 6 8 33333 8 8 0 8 8 11 8 99999 11 0 11 2 3 8888888 3 2 4 0 444 33 333333333 0 444444 33 0 1111 8 777 88888 33 0 0 33 0 0 777 0 1111 33 0 66 99999999 0 22 33 0 8 8 8 88 111 8 8 0 11 8 8 11 77777777777777777 55555 33 33 7777777777 0 0 0 99 111 2222 33 3 777 33 88888 0 777777777777777777777 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 0 5 3 33 4444 777 3 00 0 0 0 77777 0 0 77 55555 0 0 55555 0 000000000 0 0 555 1 11 0 444444444 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 222 8888 8 7777777 44444444 8 11 8 8 00000 8 8 8 8 8 0 8 88 8 0 8 111 2222 99 99 7 111 3 99 99 9999999999 6 66666 66666666666666 111 5 66 1 0 222 5 5 5 3 66 5 11111111 333333333 5 000 111111 5 888 5 5 5 5 4 0000 9999 33 5 222 5 66 3 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... .. ..... . ........................................ . . .. .. . . . . . . .... . . . . . . . . . . . .... . . . . ... . . . . . . . ............................................... . .. . . . .. . . ... . .. ..... . .. . .. . . ........... ... ......... . .. .. ... .... .... . .. . .. .... . . . . ...... .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... . ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .. . . .. ..... . . . . . .... . . . . . . . . .. .. .................. .. . ... ..... . . .. . ... . .................................. . ... ........ . .. . . . . ..... . . . . . .. . ..... .. . .. . . ....... . . . . ... .. ......... . ...... .. . .... . ... ..... .. . . .. . . ... . .... .. . .. ........ . .. .. . . . . .. ... . . . .. . . .. ................. ..... .. .. .......... . . . .. ... .... .. . ... .. ..... . ..................... . ................................................................................................................. . . ... ................. . .. .. . . ... . . . .. .... ... . .. . . . ..... . . .. ..... . . ..... . ......... . . ... . .. . ......... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... ... .... . ....... ........ . .. . . ..... . . . . . . . .. . . . ... .... .. .. . ... . .. .. .......... . ..... .............. ... . .. . . ... . . . . .. . ........ ......... . ... ...... . ... . . . . . .... .... .. . ... . .. . . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 00 55555 2 5555555555555555555555555555555555555555 2 0 55 88 0 0 8 5 0 0 8888 0 3 3 3 3 3 3 3 3 3 7 7777 7 3 3 3 777 0 3 3 3 3 3 3 33333333333333333333333333333333333333333333333 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 00000000000 777 777777777 7 77 00 333 0000 3333 3 00 3 00 7777 3 3 7 3 333333 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 7 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 22 0 0 88 00000 0 5 5 2 2 2222 5 5 0 8 0 0 0 0 88 55 000000000000000000 22 0 000 00000 5 0 88 0 000 8 8888888888888888888888888888888888 0 000 22222222 0 44 8 6 0 0 00000 0 0 8 0 0 00 8 00000 00 8 00 5 2 2222222 2 5 2 0 888 88 555555555 0 888888 88 0 2222 8 555 22222 88 0 0 88 0 0 555 0 2222 88 0 00 88888888 0 55 88 0 0 0 0 88 888 0 0 8 00 0 0 00 55555555555555555 00000 55 88 2222222222 0 0 0 00 000 0000 22 2 555 88 55555 0 888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 0 5 2 88 8888 555 2 88 0 0 0 22222 0 0 00 00000 0 0 00000 0 000000000 0 0 000 0 22 8 888888888 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 444 6666 0 4444444 00000000 0 00 0 0 00000 0 0 0 0 0 8 0 88 0 0 0 888 5555 22 22 5 777 5 22 22 2222222222 7 77777 22222222222222 777 0 99 2 1 555 0 0 0 2 99 0 66666666 999999999 0 111 222222 0 888 6 0 0 0 1 6666 0000 88 0 888 0 99 2 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TA-TA--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-ATTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAA-TGTTAC-AATAG-GC-ATTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAG-AACAAGCAAATTCAATGTTTAA-TTAAGT----AACCTTTGCATATGTTCCTATTAC--TA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAACTTTT-CTTGA-TATTT--------------CTACAGCTGAAGCAATTTTAA-TCAAACTAACAC-GTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTAT---GATTTTAAATTTTTCT-TCGTTGA-ATTTAAATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGGG----AGAAAAAATTAAAA-TGTGGTTGAC-C-GTCAAGATAAACCAAGGT-TAC--GCG-CGATTTCTTAAAAA---------CCTT--GCGAGC-GCCCA-TGTTTAAAAAAAACCAAG-ACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGG-------AGG------GCGTCCCGATAAGAACCACGCCCTGTG-GTGCTA-ATGTACGA-TAATC-AAAGGGAGTTTGAATGCC-GATTAAAC---AGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGATTT---ATTTGAACTTTCCAAAAAGATCTGT--G--CGAAA-TTCTCTGGTAGGGGCTATCTC-TTCGGTTGTA-AGTAAGGGC-T-------TAAGGTCA-----TACATT--TCCGT-AAT----TATTGGCCCCAATTTC--TTATA--TTTTAACAGGACCATCTTC-CCACCG---ATTTACCAT----ATTCAAGGA-A--AACTGA-ATAACAAAA-AAC-TTGTTTGCTAGAAAAAGGTTG-ACGCG-AACTTCCTAATTCTTCCACA-C-CGC--GAGGT-CGG--ATC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTG-TG-TTCATTTATT-CTTA-CA--TTAGT-AA-CA---GTAAAACCAAGA-AAT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTGT--GATCT-GAT---CG-AC-AAAGTATTT-CTACG-AGTTAA-GGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGTT-TTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGACTTTA-GTT--AAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTCCAAGCC--AAA-ATACATG-C--TTTA------AATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCATTCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCT--TCTAC-A----TTTTC----AAATGATGTC-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-T--TCAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CT--AT-GC-A--TTTTTTTTTCAAAA-AATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--------AAT-TTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTT
gi|11 : -GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAA-GGAG-TTGA-TGCC-GATTAAA----AGT-GAG-TGGTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-AT-TTTGA--CTTCTAAAAAGATCCGT--GGGcgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT-----CA-AGTTC---CCCTTTTAC-A---TTTTTC----AAA-AATGTTTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TG-AAAACT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CA--A-TAC-ATTTTTTTTC-----AA-AATGCT---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-T--TCAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : AAAA-GGATG-ATGCC-AA-TTC--AATT-TTGCACG-CAAGCTTAAG-T-CTG--Agtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-ATTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAA-GACA-GCAAATTCAATGTT-AA-TTAAGTTGTTAACCTT-GCATATG--C-----------------------------------------------ACC-TTCATCAAAA--TGCAGA-TTTGAG-GCAAATT--AATTT-AAATGCAAG---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--T-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T-------ACACCGGTGTAGTCCATCA---CAA--T-TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTGA-ATT------AACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--AG-CTAT--CGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCNNNNNNNNNNNNN-------NNN------N------------NNN-NN---NNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTGA-TGCC-GATTAA-----AGT-GAG-T-GTTTA-GTTTTTTCTA-GTGCGAA--TTATTT-TTATTTGA--CTTCTAAAAAGATCCGT--GGGCGAAAATTCCTTGG-------TATCTCCTTTGGT-GTA-A-TA--GGC-T-------TA-GGTC------TTTATA--TTCGT-AAT----TATT-GC---AATTT---T-ATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATA-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GA--TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCA---C----AC--A---GCAACG-----GGTGACAT--GT-A---CTA--TCTG-TG-ATCATT-AT--CT-A-CA--A-AGT--AACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTA--CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGACTGGA-G-T--AAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTCAATGCCGTCTA-ATGCA-A-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-ATT-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---G-CATCGTTC---CC--TTTACAA--TTTTTTC--------AATGTT---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATG-CTACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-ATTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATT--AAAA-GAT-CAT-TCATTTTC-AGAAATA----TACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACCTT-GCATA-----CT--T-CCTCATACTTAGGATA----AATG---ATATAAT--AATGCACC-TTCATCAAAA--TGCAAAGTTTGTG-GCAAATT--GATTT-AAATG-AAA---AATTAA-TCGT--AAC-----AGCTATCACAAAGT--TTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT-------ACACCGTTAT-GCTTATCA---CAA--C-TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTGAGATT------AACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGTAA-CCA-GTT-TAC--GC--CGAGTACC----AA---------CCTTTGGCGAGC-GCC-A-TGTTAGAAA-----CAAGGACGGT-GC------TTA-CCGTTTAGTCCACAGA---ATCT-GTCGGA--AGGATCGTTCAGA------T------------AAC-AC---CTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAGATTGCCTGACTAAATAAAAGT-GAGCTGGTTCATATTATCCTTATGTTCGAA--T-ATTA-T--TTTGA--C-TCCAAAAGCATCCGT--GGGC-AAAATTCCTTGG-A-----TATCTCCTTAGCT-GTAGA-TA--TCC-TAAGTATGTA-TGTTTCCTTGTTTATAATTTCTT-AATTTAATATTGACA--AATTTGACTAATAATTTTTA-CAGAATAAT--TC-TTCC-GACCATT-AACATCATAATTCA--GATAGATACGAG-A------AATGACTTTGT--G-TACAAAA--GTTG-ACGCG-AA--TC--AATT-TTGCACA-CACGC--GAG-TCCTG--ATCGATTC----AC---T--GCAATATCCTCAATCATAT--AT----------TCTGTTGTACCATA-ATCACT-A-CACCACAGTAAAACCACGATAAA--CCAGACA-TCGCGATAA------CT--TTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TAG-C-AT--CAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GTAA-CCA-GTTATACCCGCGGCGATT-CT----AAATTCTAAAACGTTG-GCGAGCCGCC-AATGTTTGAAG-----CAAGGACGGT-GCAAGTGTTTTTGCGTTTTGTCCACAGA---ATCTGGTCGGA-GAGG-------AATCGATAAG------------AAC-AC---CTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTG-GTGCGAA--TGATTTATTG-TTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGGT-GTA-G-TA--GGCTT-------TA-GGTCT-----TTTATAT-TTCGTAAAT----TATTTGC---AATTT---TAATA--TTCTA-CAGGAC-AT--TCTTCAC-G---ATT-ACCAC----ATTCA--GA-AGTAACTGGAA------AA-GGC-TTGT--G-TAGAAAA-GGTTGAACGCGAAA-TTC-------TTGCACACCACGC--GAG-T-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACAT--GTGA---CTA--TCTG-TGAATCATT-AT--CT-ACCA--AAAGT-AAACC---GTAAA--CAAGA-A-A-TGGA-AA------CT--T---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTGTTGGA--TTGAT---CGTAAACAAGTA-TT-CTACG-AGT--A--AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGTA-TT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GACTTAA-A-T--AAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCA---------A-ATGC----C--CTCAATGCTAAATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-ATT-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---G-CC-AATTCG--CC--TTTAC-A--TTTTTTC----AGA-AATGTT---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGTG-T--AAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTCAATGCT--TTACATGCATATC--TT------T-AATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--ATTAC-A--TTTTTC------AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TA-TAAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTTCAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAG-Tgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT-AA-TATTTGTGATTGT--GA--T-GATGATCGTAG-CAAGTA-TTGCTACGGAGT--AAGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGGTG-GGCAAGGGAGACT--A-G-TTCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC--ATGCC--AAA-ATGCATA-TATTTAAATGCT-AGTCT-AAT--TG-C-AA-----TCTA-AT-GCAAC-CCCAAT-GG-A---TC-A---------TCCCATGT-AGT--CTCA------T--CA--TTCCA-TGC------AC--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT-----CA-AGTTC---CC--A-TAC-A--TTTC--------AA-AATTTT---AT-GC-ATGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTtga
blockSeqs : A CA A . T CAGGATACGGTGT GAG . AA CATT C TATA T C G TTC A C AATGGATT GA . TTC C . A CT . . GTG AAATTACCGTATGACGAAT . CTGC A TAGA A GAAGGGCATTTAA T . TC TAAG TTGAA CC GTTA A GCACGGTGGTTTCGCCCCAGTTGAAGATGTTGAAGTGAG A C TT GA . C G C T . AG T A T A A . . C T A G T C A T T AC T G . T T T . CTTCCTCATACTTAGGATAAATGATATAAT . . G A . . . C . . . . C . T . T A AATAAAAAT TT TT C TA CC . T AAA A TC A AT T T G G . T . . T AT G . A AT T T TTC A C . . A T . AAACAAAAA T A . GG . TTTC A G . A A . G C A AACTAA ATGGAG GA . A A T TC . AA TT . A G G . A T G . TAAAAGATT G . C T C . C TTTA T T T A A G CA G . A T T A C AG T ATAT A AA A A CACTT A CATCAGTATTGTTTTTAT TC . T T . T . AC T G G A A AAC G G A C A . . A CC GG CTAAATTCTAAAA TG C AA . G . AA T . N AGGATCGTTCAGAT . . NNNNNNNN C CA T T T ATAAA . C T T . T TTAT . GG G A AC T C T . GA . TAAGTATG . TCCTTG AT A TTAA G A GACTA AT . A . T . ACC . CATA . T GT AA T CT . . . A A T A . C TT . C AC ACTGCAACAC TCCTC TG . GACTA T T . CA AC CCAC AA A ACG . CATC T CTTACAAAAA G A C . ACCACAACACACACA G CT . G T AAC . A T TG TT GAT T AA . G G AAG G A AA . C A . A . . . AT T GG TAGTGT . A A . . C CTAC C CAA C . TA T C AA A A A A T . C T . GG ATAA CG A . C AC C T T T GAT . C AAT GTCT C ATATAT CAATGCTA A . C C . T . C . . A A . C A T A . AT G . T TA . ATTTCAATGA A . ATTGCCAATAAACG . A AT A CG G T A A GA A TATGG CCCTTT A TTT TTTCAA . TAC T A A T C ACAA TAA AG . AAA T TA A T C
blockSeqs : A A . . . TAT G . . . . AT . . A TT . . AGG . . TC . . . . . . T CATAA . . A . . AAGCGCA T . T TTA T C A A CAGTATGAA A . TT A . . G T . . A . . T . . . . . T . G . C . . . G C . . . . T . TGC . . . T . . . . . . . . . . . . T A ACAATAAA T T C T TT . C TA . . . AC . . . . . T T A G . . . . . T . C . . . . . GAAAAAAAA C . . T . . . . . . A . G . A A TA AC . A A T . . A C . . . . . . . . . ATT G . . T . . . C . T . . G A . . . . . A C . . TAT A . . . ACT A . . . . T . . . C . G G A A AC G G . A A . . . . G ACCAA T . A . G . A . . N GAGGAATCGATAAG . . NNNNNNNN . G T . . AC . . . . . T ATTG . . G A A T C A . A . TT . T T . . T . TA . . . . . . . . . . . GA A . C . . . . . T A . . . . . . GATTCACT . TC . ACTA . A . . A AA A A . . AT . CTTTACAC . . C . CAC G C . A T AAC . . T . T . T G . . . AG . . G . . . . . . . . AT T G GGAGT . . . . . . . . CA . . . T C . G A A A . . . G . G . C . . . A . T T C GAT . C AAT TT . ATATC CAATGCT . . . . . . . . . . . A . C . T A . . C . A . . . . . CAG . . . A GT . . . A . . ACCA GCCTT . T CA . . G . . . T . AG . . T . . A . .
blockSeqs : . A . . . T G . . . . AT . . . . . . . . T ATAA . . . . . GGCA . . A A T C A . CATTGAA A . . G . . . C . . A . A . . . . . TA G . . A T . . . C . . . . . . . . . ATA . CT . . . . . . . . . . . . G . . C . . . C . . . . . . CTAA G . A . G . A . . G NNNNNNNNN . . CGCGTTCC . G . . . A . . . . . G ATT . . . A . . C T . G . T . . . . . . . T . . . . . . . . . . . GT A . . . . . . . T A . . . . . . ACACA . TG . . . . . . A A . A . . AA . CTTAC . C . CAC G . . . T . . . T . T . T . . . . A . . A . . . . . . . . TG A G TAAAT . . . . . . . . CA . . . T . . . . T . . . . . TA . C AT AA . AAC AAATGCT . . . . . . . . . . . A . . . T A . . T . A . . . . . TAG . . . A G . . . A . . GCAT CTAT . T CA . . T . . . C . A . . A . . A . .
blockSeqs : . . . . . NNNNNNNNN . . GGTC . T . . . . . . . . . . TT . . . . . . . . . . . . . A A . AGTTC . . . A . . C T . . . . . . . . . . . . . . . . . . . A . A . . . . . CAG . . . A G . . . A . . GCC CCTT . T C . . G . . . T . A . . T . . A . .
blockSeqs : . . . . . . . . . . CA . . . . G . . . A . . GCA CCAT . T C . . G . . . T . A . . A . . A . .
blockSeqs : . . . G . . . . . . CA CAA . T . . . G . . . T . A . . T . . . . .
blockSeqs : . . . . . . . . . . CA CCA . . . . . . . . . A . . . . . . . . . .
blockSeqCons : *** GGGGNNNCGAN*********************** *** CGCGTTCC A**** ** TT*** ** T* A** AT* NGANT**** *** C*** AAC**** AATGCT** ** ***** A* T** A*** ** *** ** ***** CAG*********** *** G** GCA***** CCNT***** T** C***** **
originalCons : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGACGAGG-------AGN------G------------AAC-AC---CTGTGNGTGCTNCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAAC---AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTT-TTATTTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AA-TTC--AATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGTATGGCNA-GGAGACTTAA-G-T--AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTCAATGCC--NNA-ATGCATA-C--TTCAATGCT-AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---G-CA-AGTTC---CC--NTTAC-A--TTTTTTC----AAA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
finalCons : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACCTT-GCATATG--CCT--T-C--CA----------A----AATG---A-AT--T--AATGCACC-TTCATCAAAA--TGCAAAGTTTGCG-GCAAATT--AATTT-AAATGCAAA---AATTAA-TCGT--AAC-----AGCTATCA-AAAGT--TTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T-------ACACCGTTAT-GTNNATCA---CAA--C-TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTGA-ATT------AACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TAG-C-AT--CGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGTAA-CCA-GTT-TAC--GCG-CGATT-CT----AA---------CCTTT-GCGAGC-GCC-A-TGTTTGAAA-----CAAGGACGGT-GCA-GTGTTTA-GCGTTTTGTCCACAGA---ATCTNGTCGGAGGGGNNNCGAN-----------------------AAC-AC---CTGTGCGCGTTCCATGTACGA-TATTC-GAAGGGAGTTTGA-TGCC-GATTAAA----AGT-GAG-TGGTTTA-ATTTTTTCTA-GTGCGAA--TNATTTTT---TTGA--CTTCCAAAAAGATCCGT--GGGCGAAAATTCCTTGG-A-----TATCTCCTTCGGT-GTA-A-TA--GGC-T-------TA-GGTCT-----TTTATA--TTCGT-AAT----TATTGGC---AATTT---TAATA--TTTTA-CAGGAC-AT--TC-TCAC-G---ATT-ACCAT----ATTCA--GA-AGTAACTGG-A------AA-GAC-TTGT--G-TAGAAAA-GGTTG-ACGCG-AAT-TCA--ATT-TTGCACA-CACGC--GAG-T-CTG--ATCG---C----AC--AC--GCAACG-----GGTGACAT--GTGA---CTA--TCTG-TG-ATCATT-ATC-CT-A-CA--ANAGT-AAACC---GTAAA--CAAGA-A-T-GGGA-AA------CT--T---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTGT--GA--T-GAT---CGTAN-CAAGTA-TT-CTACG-AGT--A-GAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTA-TT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGGAT-GGCNA-GGAGACTNGANT----AAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGAC---TCATTTCAATGCC--NNA-ATGCAAC----TTAATGCT--AATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-ATTCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GCCAG-----------TGTCATG---CTTTTTC-AA--TGAAAAACTG--TC-A-ATT-CAATGTT--TATTTTCT-AATGCA-----AGTTCCCNT-----TAC-AT--TTTTTC-----AA-AATGTT---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 1 1 1 555555555555555 11111 1 11 2222 1 22222222 1 1 111 1 222 777777777777777777 22 222 1 1 22 11 111 222 55555555555555555555 11 2222 2222 2 2222222222222222 11 111 11111 22222 11111 9999999999999999999999999999999999999999 1 11 1 1 1 1 1111 1 1 1 1 1 1 3333 222 1 1 1 1 1 22222222222222222222222222222222222222222222222 1 11 1 11 1 222 1 11 33333 1 11 11 444444444444 111 22222 11 1 22 1 222 11 1111 22 1111 3333 1 44444444 22 3333333 222 111 11 1 11 1 1 22222 1 222 1 1 44444444444444444444444 2222 111 2222 44444 1 44444444 1 2222 1 222222 3333333 22 1 333 111 333333 222 111 1 1 1 2222 1 1 1 1 222222222222 11 11 1 11 33333 1 555555555555555555555555555555555555555555555555555555 22 1 11 11 11 22 222222 11 22222 1 11111 777777777777777777 11 11 1 1111 1111 33333 1 1111 11 1 1 1 11 11 1 1 444444444444444 1 1 1 1 2222 1 111 22222222222 222 333333333 22222222 1111 1 11 2222 11 11 4444444 1 111 11 444444444 333333 11 1 222222 22222 1 22222 11 1 111111 1111 11111 2222 11 1 222222 22222 11 1 11 111 11 11 55555555555555555 22222 11 444444444 1 111 1 22222 222222 22 111 11 111 1 333333333333333333333333 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 111 44444444444444444 11 11 1 222 11 222222 1111 22 1 1 1 22 1 2 11 22222 1 1 22222 1 444444444 1 1 11 111 111 1 1 2222 33333333 1 2222 1 1111 1 1 11 2222 11 1 33333 1 1 111 2222 22222 1 1 1 22 1 1111 888888888888888888888888888 11 22222222 1 1111 111 1111 11111 2222222222 11111 22222222222222 111 111 22222222 111 111 1111 11 111
lowQualScore : 9 4444 0 0 0 666666666666666 77777 0 33 1111 0 33333333 0 0 6 333 3 555 999999999999999999 00 333 999 6 0 0 0 0 55 33 777 000 77777777777777777777 33 1111 3 1111 0 8888888888888888 3 33 777 88888 44444 55 88888 3 8888888888888888888888888888888888888888 3 0 88 55 0 0 8 6 0 0 4444 0 3 7 3 7 3 3 3 7 7 6 0000 6 7 7 7 000 2 3 3 7 3 7 3 88888888888888888888888888888888888888888888888 3 88 6 3 3 88 3 6 333 3 88 33333 3 88 7 88 7 7 333333333333 333 77777 88 3 00 22 3 333 88 3333 7 00 7777 0000 7 3 0 22222222 44 2222222 111 7 666 6 88 3 11 2 3 55555 7 6 3 333 7 3 3 66666666666666666666666 1 7 8888 0 222 8888 22222 3 6 88888888 3 3 1111 8 0 3 888888 4444444 66 0 3 3 3 111 777 888888 333 777 0 0 0 1111 0 0 0 0 999999999999 6 88 6 44 3 88 6 22222 7 5 444444444444444444444444444444444444444444444444444444 7 7 7 6 00 3 88 7 7 7 7 33 11 00 333333 44 99999 7 0 66666 3 333333333333333333 33 33 0 4444 4444 00000 0 2 2 3 3 7777 2 2 22 7 0 0 0 33 22 0 0 333333333333333 3 0 0 0 0 1111 0 88 8 444 44444444444 222 333 1 444444444 88888888 8 99 44 6 8 8 8 7777 0 6 8 8 0 8 8 11 8 3333 8 11 0 11 55 8888888 3 2 4 0 444 33 333333333 444444 33 0 222222 00000 0 88888 33 0 888888 1111 88888 1111 33 0 66 888888 11111 33 0 8 8 66 111 8 88 11 8 8 11 77777777777777777 55555 33 33 000000000 0 777 0 00000 333333 55 777 33 111 0 999999999999999999999999 3 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 2 777 66666666666666666 2 88 33 0 3 111 33 3 3 222222 4444 3 00 0 0 0 33 2 0 0 77 55555 0 0 55555 0 000000000 0 0 999 1 11 0 8 1 000 444 0 00 0 0 1111 66666666 0 1111 0 1111 0 0 33 3 0000 33 6 3 9 3 0 33333 3 1 3 666 8888 55555 3 3 3 00 6 5 3 7 777 8 7777 88 111111111111111111111111111 8 8 11 8 00000000 8 6 8 8 8 8 8 8 2222 8 111 2222 99 99 7 44444 99 99 9999999999 6 66666 66666666666666 111 5 66 5 22 222 5 5 5 3 66 5 11111111 333 1 666 5 3 66 888 5 66 66 888 5 5 5 5 4 0000 9999 33 5 222 5 66 3 5 5
lowQualScore : . .... . . . ............... ..... . .. .... . ........ . . . ... . ... .................. .. ... ... . . . . . .. .. ... ... .................... .. .... . .... . ................ . .. ... ..... ..... .. ..... . ........................................ . . .. .. . . . . . . .... . . . . . . . . . . . .... . . . . ... . . . . . . . ............................................... . .. . . . .. . . ... . .. ..... . .. . .. . . ............ ... ..... .. . .. .. . ... .. .... . .. .... .... . . . ........ .. ....... ... . ... . .. . .. . . ..... . . . ... . . . ....................... . . .... . ... .... ..... . . ........ . . .... . . . ...... ....... .. . . . . ... ... ...... ... ... . . . .... . . . . ............ . .. . .. . .. . ..... . . ...................................................... . . . . .. . .. . . . . .. .. .. ...... .. ..... . . ..... . .................. .. .. . .... .... ..... . . . . . .... . . .. . . . . .. .. . . ............... . . . . . .... . .. . ... ........... ... ... . ......... ........ . .. .. . . . . .... . . . . . . . .. . .... . .. . .. .. ....... . . . . ... .. ......... ...... .. . ...... ..... . ..... .. . ...... .... ..... .... .. . .. ...... ..... .. . . . .. ... . .. .. . . .. ................. ..... .. .. ......... . ... . ..... ...... .. ... .. ... . ........................ . ................................................................................................................. . . ... ................. . .. .. . . ... .. . . ...... .... . .. . . . .. . . . .. ..... . . ..... . ......... . . ... . .. . . . ... ... . .. . . .... ........ . .... . .... . . .. . .... .. . . . . . ..... . . . ... .... ..... . . . .. . . . . ... . .... .. ........................... . . .. . ........ . . . . . . . . .... . ... .... .. .. . ..... .. .. .......... . ..... .............. ... . .. . .. ... . . . . .. . ........ ... . ... . . .. ... . .. .. ... . . . . . .... .... .. . ... . .. . . .
lowQualScore : 8 8888 0 0 0 000000000000000 55555 0 88 2222 0 22222222 0 0 5 000 3 000 333333333333333333 00 333 333 7 0 0 8 2 00 88 555 000 00000000000000000000 88 2222 2 2222 0 5555555555555555 2 88 555 00000 55555 00 55555 2 5555555555555555555555555555555555555555 2 0 55 88 0 0 8 5 0 0 8888 0 3 3 3 3 3 3 3 3 3 7 7777 7 3 3 3 777 0 3 3 3 3 3 3 33333333333333333333333333333333333333333333333 3 33 7 7 3 33 3 7 333 3 33 33333 3 33 3 33 3 3 000000000000 777 77777 33 3 77 00 3 333 33 3333 3 00 3333 7777 3 3 7 77777777 00 0000000 000 3 333 7 33 3 00 0 3 33333 3 7 3 333 3 3 3 77777777777777777777777 0 3 3333 7 333 3333 00000 3 7 33333333 3 2 2222 8 0 2 222222 8888888 55 0 2 2 2 222 555 222222 000 555 0 0 0 2222 0 0 0 0 555555555555 7 33 7 00 3 33 7 77777 3 5 000000000000000000000000000000000000000000000000000000 3 3 3 7 77 3 33 3 3 3 3 33 00 77 333333 77 77777 3 0 88888 2 888888888888888888 88 88 0 2222 8888 00000 0 5 5 2 2 2222 5 5 55 0 0 0 0 88 55 0 0 222222222222222 2 0 0 0 0 2222 0 88 0 000 22222222222 000 000 0 444444444 22222222 0 44 00 0 0 0 0 0000 8 0 0 0 8 0 0 00 8 2222 0 00 8 00 88 2222222 2 5 2 0 888 88 555555555 888888 88 0 222222 22222 0 22222 88 0 888888 0000 55555 2222 88 0 00 888888 22222 88 0 0 0 88 888 0 88 00 0 0 00 55555555555555555 00000 55 88 222222222 0 555 0 00000 000000 55 555 88 000 0 888888888888888888888888 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 5 555 55555555555555555 5 88 88 8 2 000 22 2 2 222222 8888 2 88 0 0 0 88 5 0 0 00 00000 0 0 00000 0 000000000 0 0 888 0 22 8 0 0 444 000 2 55 0 0 2222 22222222 0 2222 0 0000 0 0 88 2 0000 88 5 2 8 2 0 33333 3 0 3 777 3333 33333 3 3 3 77 7 5 2 0 555 0 2222 66 000000000000000000000000000 0 0 00 0 22222222 0 0 0 0 0 0 0 0 0000 0 888 5555 22 22 5 22222 22 22 2222222222 7 77777 22222222222222 777 0 99 1 11 555 0 0 0 2 99 0 66666666 888 0 222 0 2 99 888 0 99 99 888 6 0 0 0 1 6666 0000 88 0 888 0 99 2 0 0
consensus : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACC-TTGCATATG--CCT-T--C--CA----------A----AATG---A-AT--T--AATGCA-CCTTCATC--AAAATGCAAAGTTTGCG-GCAAA--TTAA-TTTAAATGCAAA---AATT-AATCGT--AAC-----AGCTATCA-AA--AGTTTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T---AC--AC-CGTTAT-GTNNATC-AC---AAC--TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTG------A-ATTAACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCC-GTC------GGAGGG---GTNCCGATAAGAA-CA---CCTGTGNGTGCTCCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GAT----TAAACAG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTTAT--T-TTGA--CTTCCAAAAAGATCCGTGGG--CGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGCT-------T-AGGTCT-----TTTATA--TT-CGTAA-T----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTCT-CA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------GAAA-GAC-TTG--TG-TAG-AAAAGGTTGA-CGCGAA-TTC--AATT-TTGCACAC-ACGC--GA-GT-CTGA--TCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-A-TCA-TTA-TC-CTAC-A--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTG---T--GA--T-GATCGTAN-CAAGTA-TT-CTAC-GAGT--AGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGT-ATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCNA-GGAGAC-TNGA-NTAAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTC-AATGCC--NNA-ATGCA-A-CTT-AATGCT---A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CCNTT--AC-ATTTT--TT---CA-AA--ATGT--T---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
Reference ( family-2077 ) : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGGGAAAGTTTTTCATTGAA-CAGC--CTTGAT--------A--G--G---GAATTTG-TTTCTCA---GTTTCCAAAAGAAACA-TG-TTTTTCTTGAGAATTGAC-AA--TA---GCAG-TGTTTCAAANAA-TTA----A--------TGCTA--TTTT----AATGCC----ACT-GAA-AA---GGGC-----ATTATTTGA--AACT-T-TA-TA--AATT----AAATGCCTACA---A-CGACA-----------------CAGT-TGAA--------------AAGAACAGTT-ATTTTTCAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CAT-TCATTTTCAAGAAATA---TTACTTTTGTTTCAAATGCTTATATATATATCC-GCATCTGTTTGGCGATGGTCAATTTAA-GACA-GCAAATTCAATGTTTAA-TTAAGTTGTTAACC-TTGCATATG--CCT-T--C--CA----------A----AATG---A-AT--T--AATGCA-CCTTCATC--AAAATGCAAAGTTTGCG-GCAAA--TTAA-TTTAAATGCAAA---AATT-AATCGT--AAC-----AGCTATCA-AA--AGTTTCAC--AACTTTTTCTTGAATATTTA--ATAAA---AATTTACAGCTGAAGCAATTTTAA-T---AC--AC-CGTTAT-GTNNATC-AC---AAC--TCTAAAAAACAATATGT-CTTCATTATACTGATT---AATTTTTAT-CCGTTG------A-ATTAACTCCACTAATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAATCAAT-ACAAGAATTCTCAT--GAACT-TTTGACTTTTTCTCTTTG-GTATCTT--CTGAATTCAT-TAA---TCTTAATAT-AG-GACTTTGGTAAAGAAAA---AAAC-----AAAAAACNTTTTATTATTTTCTT----CCGGGTATAT----AGAAATTTTTTCC--C-AATG-GGTATT--------ACATA-TATG----TCATCTGAG-TATACTAAAAA-----TTAATAA-T--AG-TCACTTTG-GATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAA-----TTA-CCACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TG-C-AACCTA------ATT---AACTTGATGCA--GCCGCC-GGGACCCCTTC-ATT--ATTTCTCTTGT-T---TTTAAAATAATTATTCCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAAAAATTCATCCAGAT-ATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAACCACGTTAGAATT-AATTTAAGTTGTA-T-ATTCATAAGCAGGTCATTAA---AAACTTTA-CGGTTAACACTTTAAAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTC-C---AAGCT-ACGGGGAAGAGAAAAATTTAAAA-C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATCTNGTC------GGAGGG---GNNNCGANAA----CA---CCTGTGCGCGTTCCATGTACGA-TATTC-GAAGGGAGTTTG-A-TGCC-GAT----TAAA-AG-TGAG-TGGTTTA-ATTTTTTCTA-GTGCG--AATNATTT-T--T-TTGA--CTTCCAAAAAGATCCGTGGG--CGAAAATTCCTTGG-A-----TATCTCCTTCGG-TGTA-A-TA--GGCT-------T-AGGTCT-----TTTATA--TT-CGTAA-T----TATTGG---C-AATTT---TAATA--TTTT-ACAGGA-C-A--TTCT-CA-CG---A-TTACCAT----ATTCA--GA-AGTAACTG------GAAA-GAC-TTG--TG-TAG-AAAAGGTTGA-CGCGAA-TTC--AATT-TTGCACAC-ACGC--GA-GT-CTGA--TCG---C----AC--AC--GCAACG-----GGTGACA--TGTGA---CT--ATCTG-TG-A-TCA-TTA-TC-CTAC-A--ANAGT-AAACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAGGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACAA--CCAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAGNAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTG---T--GA--T-GATCGTAN-CAAGTA-TT-CTAC-GAGT--AGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGT-ATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCNA-GGAGAC-TNGA-NTAAAAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-GG-ATT-ATT--AATGC---AAG--AAAGGCATTTAATTAACAG-TTTG-----TATGACAT-ATTTNAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATGCCATTTAAATGTTCATNATTA-TGA---CTCATTTC-AATGCC--NNA-ATGCA-A-CTT-AATGCT---A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAG-TCTAAT-GC-AACTTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCANTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TGAAAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CCNTT--AC-ATTTT--TT---CA-AA--ATGT--T---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--NC-T--TCAATGCAAAATCAA-TG-CAGTTCTTT
gi|1 : AGAGAAACTTA-AACC-TGTCT-AAA------------T--TTTTG--CCAT--TGGA----GATGCA-TAGAG-AAGAGT-TGC-ATTAA-ACGGGAAAGTTT--CATGAAA-GAGCATCTTGATCGGTTTAGA--GATG---GAATTTG-TTCTTCAAAAGTT-CCAAAGAAGACAGTC-TTTTCCTTGAGAACTAAC-AAAATAAATGCAT-TACTTCAAATAAATTA----A--------TGGCAACTTTT----AATGCC----ACTTGAA-AAAGGGGGC---------TTTGACAAACTAT-TA-TA--AAT------AATGCCTACA---AACGACA-----------------CAG---AAA--------------AAAAAC-GTT-ATTT--CAGAAGACTTTA-AATTCTT-TTA-TAAAATTGTTAA-TCAAAA-TGTTAC-AATAG-GC-ATTAAAAAAAGATGCAT-TCATTT-CAA-AAATAAATTTACTTTTGTTC--AATGGCTATATATATATCCCACATCTGTTTGG--ATGTCCAATTAAG-AACAAGCAAATTCAATGTTTAA-TTAAG----TAACCTTTGCATATGTTCCTATTAC--TA----------AGGATAATGTATA-AT--TTAAATGCACCCTTCATCAAAAAATGCAAAGTTTGCGCGCAAATTTTAATTTTAAATGCAAAGGGAATTAAATCGGCAAACCAAAAAACTATCA-AAACACATTCACCAAAC-TTTTCTTG-ATATT--------------TCTACAGCTGAAGCAATTTTAA-TCAAACTAACACGTTA--GTAAAGCAACCCAAACCATCTAAAAAACAATATGT-CTTCATTA---TGATTTTAAATTTTTCT-TCGTTGAATTTAA-ATTAACTCCACTTATTGTGTTGTGTGTGTTGGTGAGAAAAATAGAAAAAAAGAGAAAGCAGACCGAGTAGTAAGACGAGAGAGAAAGACAGAAGAAGGGAGGAAACCAGAGAGAAAGAGAAGAATTAAAA--AATCACAA-AATTCTCATTAGAACT-TTTGACTTTTTCTCTATG-GTATCTTTCTTGAAAT-ATATAACAGTCTTAAAAT-AGAAACCTTGGTAAAAAAAACACAAACAACAAAAAAAAAAATTTATTATTTTCTTCCCGCCGGGTATATGAAAAGGAATTTTTTCC--CAAATG-GGTATTGTTTCACCACATA-T-TGGTTTTCATCTTGA-TTTACTAAAAA-----ATTATAA-T--AACCCACTTT--GATGTCAGAAC-TGC--GAAAAATTCCAATGTCTTACAAATTTTTTTACCCACTGGAACAC-AATGC-ATTCA-GGACAACGACT-GA-TG-CAAACCTA------ACTTAAAATTTGAT-CAAGGCCGCCGGGGACCCCTTC-ATTTAATTTCTCTTGTCT---TTTAAAAAAATT
gi|1 : cttagaaATTTCT-ATCCTTTAATTAAAAAATTCATCCA-AT--TGAT-TTGATTAAATACTTTTCTGTTA-TATGCTTAATAATAACCACTTTAAAATTTAATTTAATTTTGA-TTATTCATAAGCAGGTCTTTAATAAAAACTTTA-CGGTTAATTTTTTAAAGCGCT------------------GTA--ATGATCGCGCCTTC-GTATTATAGGC-ATTTCGGGTTT-CCAAAAGTA-ACGG----GAGAAAAAATTAAAA-TGTGGTTGA--CCGTCAAGATAAACCAAGGT-TAC--GCG-CGATTT-CTTAAAAA---------CC-TT-GCGAGC-GCCCA-TGTTTAAAAAAAACCAAGACGGTTGCA-GTGTTTA-GCCTTTTGTCCACAAACAAATCCTGTCGGACAAGGAGGGC--GTCCCGATAAGAACCACGCCCTGTG-GTGCT-AATGTACGA-TAATC-AAAGGGAGTTTGAA-TGCC-GAT----TAAACAGTTGAG-TGA---A-AATTTTTCCA-GTGCGAAAATGATTT-A--T-TTGAACTTTCCAAAAAGATCTGT--G--CG-AAATTCTCTGGTAGGGGCTATCT-CTTCGGTTGTA-AGTAAGGGCT-------TAAGGTCA-----TACATT--TC-CGTAA-T----TATTGGCCCC-AATTTC--TTATA--TTTTAACAGGACC-ATCTTCC-CACCG---ATTTACCAT----ATTCAAGGA-A--AACTGAATAACAAAA-AAC-TTGTTTGCTAGAAAAAGGTTGA-CGCGAACTTCCTAATTCTTCCACAC--CGC--GAGGT-CGGA--TC----C----ACCAACTTGCAACG-----GG-AACATTTGTGGGATCTAAATCTG-TG-T-TCATTTATTC-TTAC-A--TTAGT--AACA---GTAAAACCAAGAA-AT-GGAA-AAAAAATACTATC---CC-----ACCACCTTTATGAA-TTGAGGAAAAAActaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|1 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttTTGGGA-C--TTACGAGGCAAGAAAAACAAACCCAC----------CGTCC-TGTGGAA-CATTAAATGGATCAGAACAAAAGTAG--G---TTGTGGATTGTATGTAAAATATGTG-GATTG---T--GATCT-GATCG-AC-AAAGTATTT-CTAC-GAGTTAAGGAATT-TTATTAG----AATGAAGGGCTCC-AAGTGCCGT-TTTTTAAATGA-TTGTTTTTTTATTGTGGTTGATTAAATTGGGTGTGGTATGGCCA-AGAGAC-TTTAGTTAAAAAAATTAAAATATTCTCTT-TTG-AAAAAGGATTAACCCGAATA-AAATT----TCTCT-CTCCAGG-GG-ATTAATT--AA-GCCAAAAG--AAAGGCATTT--TTAACAG-TTTGATACCTATCCCAT-GTTGAAATGGT-GTCC----ATAAATTGGGCCAATC-AATTGT-CTTTTC--ATGCCA-TTAAATGTTCATT-TTATTGAAACTTCATTTC-CAAGCC--AAA-ATAC---------ATGCTTTAA-ATTT-AAATTTG-C-AAAGTTTTCTA-ATGGCAAG-TCTAATGGCAAACTTC-AATTGGGCAT--TCCCATTG-AGTTCTTCAAAATTGCGATA--TCCAATTGCAATTTTAC--TTATGGTC----------CTTTT-AATTGAGGGT-----CA--------GTCAGGGGCCTTTTTC-AA--TGGAAAACT---TC-A-ATT-CAATGTT--TA-TTTCT----------A-AGTTCAATCTTCT--AC-A--TT--TT---CA-AATGATGT--C-------CAA--C-CATTGC-A-A-GCT-------GAT--A-AATTTATAG----AC-T--TCAATGCAAAaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttgttgggacttacgaggcaagaaaaacaaacccaccgtcctgtggaacattaaatggatcagaacaaaagtaggttgtggattgtatgtaaaatatgtggattgtgatctgatcgacaaagtatttctacgagttaaggaattttattagaatgaagggctccaagtgccgttttttaaatgattgtttttttattgtggttgattaaattgggtgtggtatggccaagagactttagttaaaaaaattaaaatattctcttttgaaaaaggattaacccgaataaaatttctctctccaggggattaattaagccaaaagaaaggcatttttaacagtttgatacctatcccatgttgaaatggtgtccataaattgggccaatcaattgtcttttcatgccattaaatgttcattttattgaaacttcatttccaagccaaaatacatgctttaaatttaaatttgcaaagttttctaatggcaagtctaatggcaaacttcaattgggcattcccattgagttcttcaaaattgcgatatccaattgcaattttacttatggtccttttaattgagggtcagtcaggggcctttttcaatggaaaacttcaattcaatgtttatttctaagttcaatcttctacattttcaaatgatgtccaaccattgcaagctgataaatttatagacttcaatgcaaa
gi|10 : cttagaaagagaaacttaaacctgtctaaatttttgccattggagatgcatagagaagagttgcattaaacgggaaagtttcatgaaagagcatcttgatcggtttagagatggaatttgttcttcaaaagttccaaagaagacagtcttttccttgagaactaacaaaataaatgcattacttcaaataaattaatggcaacttttaatgccacttgaaaaagggggctttgacaaactattataaataatgcctacaaacgacacagaaaaaaaacgttatttcagaagactttaaattcttttataaaattgttaatcaaaatgttacaataggcattaaaaaaagatgcattcatttcaaaaataaatttacttttgttcaatggctatatatatatcccacatctgtttggatgtccaattaagaacaagcaaattcaatgtttaattaagtaacctttgcatatgttcctattactaaggataatgtataatttaaatgcacccttcatcaaaaaatgcaaagtttgcgcgcaaattttaattttaaatgcaaagggaattaaatcggcaaaccaaaaaactatcaaaacacattcaccaaacttttcttgatatttctacagctgaagcaattttaatcaaactaacacgttagtaaagcaacccaaaccatctaaaaaacaatatgtcttcattatgattttaaatttttcttcgttgaatttaaattaactccacttattgtgttgtgtgtgttggtgagaaaaatagaaaaaaagagaaagcagaccgagtagtaagacgagagagaaagacagaagaagggaggaaaccagagagaaagagaagaattaaaaaatcacaaaattctcattagaacttttgactttttctctatggtatctttcttgaaatatataacagtcttaaaatagaaaccttggtaaaaaaaacacaaacaacaaaaaaaaaaatttattattttcttcccgccgggtatatgaaaaggaattttttcccaaatgggtattgtttcaccacatattggttttcatcttgatttactaaaaaattataataacccactttgatgtcagaactgcgaaaaattccaatgtcttacaaatttttttacccactggaacacaatgcattcaggacaacgactgatgcaaacctaacttaaaatttgatcaaggccgccggggaccccttcatttaatttctcttgtcttttaaaaaaattctaataatccacaatatactattatatttttatttctatcctttaattaaaaaattcatccaattgatttgattaaatacttttctgttatatgcttaataataaccactttaaaatttaatttaattttgattattcataagcaggtctttaataaaaactttacggttaattttttaaagcgctgtaatgatcgcgccttcgtattataggcatttcgggtttccaaaagtaacgggagaaaaaattaaaatgtggttgaccgtcaagataaaccaaggttacgcgcgatttcttaaaaaccttgcgagcgcccatgtttaaaaaaaaccaagacggttgcagtgtttagccttttgtccacaaacaaatcctgtcggacaaggagggcgtcccgataagaaccacgccctgtggtgctaatgtacgataatcaaagggagtttgaatgccgattaaacagttgagtgaaaatttttccagtgcgaaaatgatttatttgaactttccaaaaagatctgtgcgaaattctctggtaggggctatctcttcggttgtaagtaagggcttaaggtcatacatttccgtaattattggccccaatttcttatattttaacaggaccatcttcccaccgatttaccatattcaaggaaaactgaataacaaaaaacttgtttgctagaaaaaggttgacgcgaacttcctaattcttccacaccgcgaggtcggatccaccaacttgcaacgggaacatttgtgggatctaaatctgtgttcatttattcttacattagtaacagtaaaaccaagaaatggaaaaaaaatactatcccaccacctttatgaattgaggaaaaaaaactcatttttttccgtgaatgatccattcaaggaatggatgcccatttcccgtcccaggggatttgtcccactaaaaaacgggttccgaagtgcttttcaatatgtgtccacttggacctaaatttgaaagataagcagtttgatttg---TGC--TA--TTTTAGTTCAA---TTC--TAATG--CATTTCAATGACTTCT-AAT-----GCATTGCCAATAAACGTTTCATA---TATTTTA-AAATTGAAACGCT------A-ATT-CA-TGTT--TACGTTTT-GATTATG--G-AGCTT---CTAT---GC-ATTTT--TTTTTCA-AA--AAATCGT---ATTGCAATTC-TATTTC-A-ATGCTCTG----AAT--------AAT-TTT--TT-TTATTAATTC-AAATCAA-TG-GTGTTCCTT
gi|11 : GCA-GTGTTTA-GCGTTTTGTCCACA---GAATCNNNNN------NNNNNN---NNNNNNNNNN----NN---NNNNNNNNNNNNN--TGTACGA-TATTC-GAAGG-AGTT-G-A-TGCC-GAT----TAAA-AG-TGAG-TGGTTTA-GTTTTTTCTA-GTGCG--AATTATTTAT--T-TTGA--CTTCTAAAAAGATCCGTGGG--cgataagggtttatgttttgtgttgtaatttaataagaaaaat
gi|12 : TTTC-AA--TGAAA--CTCG-TCGA-ATT-CAATGCTGATATTTTCT-AAT----C-A-AGTTC---CCCTTTTAC-ATTTT--TC---AA-AA--ATGT--TTACATGCAAATGCATATTTC-A-ATGCTTTGACAAAAT--A-AAAGAAT-GCT--ACTT--TCAATGC-AAATCAATTGCCAGTCCTTT
gi|13 : TTTTC-AA--TGAAAA-CT-G-CC-ATGTT-CAATTTT--TATTTTA--AAT---ACCA-AGCTC---CAAT---AC-ATTTTTTTT---CA-AA--ATGC--T---ATTGCAATTC-TATTTC-A-ATGCTCTG----GA---A-AA--A----CT--TT-T--TCAATTCAAAATCAA-TG-cttgaaa
gi|14 : ataactgcatctaacataATG----TCATTT-AG-TAT-CTAAAAA-----TTAATAAATGGAG-TCACTTTG-GATGTGC-AACATGCTTGAAATC-TCCAATGTCT---AAA-----TTA--CACTGG---ACAAATGCGAATCAGG----ACAACT-GATTG-C-CAACTATAAAAGATT---AACTTGAtgaacttttttat
gi|15 : -AAAAGGATGA-TGCCAA-TTC--AATT-TTGCACGC-AAGCTTAA-GT-CTGA--gtg
gi|16 : AAATCAA-TG-CAGTTCTTT
gi|2 : TAGAGAAAAATA-A--C-TG-CT-AAA------------T--TT--G--C-AT--TGAA----GATGCA-TTAAA-A----T-TGC-ATTAA-ACGG-AAAGTTTTTCATTGAA-CAGT--CTTGAT--------A--G--G---GCATATGATTTCTCA---GTTTTCAAAAGAAACA-TG-TTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAAA----TA----A--------TGCTA--TTTT----AATGCC----ATT-GAA-AA---GCGC-----ATTATT-GA--AACT-TCTA--A--AATT----AAATGC-TACA---A-CG-CA-----------------CAGTATGAA--------------AAGAACAGTT-ATTT--CAGAA-ACATTT-AATGCTTCTTA-TAAG-TTGT--A-TTCAAA-TGTTAC-AATATTGC-ATTAAAAAA-GAT-CATCTCATTTTCAAGAAATA---TTACTTTTGTTTCAA-TGCTTATATATA-ATCC-ACATCTGTTTGGTGATGGTCAATTTAA-GACA-GCAAATTCAATGTT-AA-TTAAGTTGTTAACC-TTGCATATG--C-----------------------------------------------A-CCTTCATC--AAAATGCAGA-TTTGAG-GCAAA--TTAA-TTTAAATGCAAG---AATT-AATCGT--AAC-----AGCTATCA-AA--AGTT-CAC--AACTTTTTCTTGAATATTTACAATAAA---AATTTACAGCTGAAGCAATT--AA-T---AC--AC-CGGTGTAGTCCATC-AC---AAT--TCTAAA---CA-TATGTTCTTCAGT-TATTGAT----AATTTT-AT-CTGTTG------A-ATTAACTT-ACTAATTGT-------GTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA---TTAAAATCAAT-ATAAGATTTCTCAT--GAACT-TTTGATTTTTT-TCTTTGTGTAT--T--CTGAATTCAT-TAA---TCTTAAT-T-AG-GACTTTGGTAAA--------AAAC-----AAAAA-CTTTTTATTATTTTCTT----CTGGG-ATAT----AGAGATTTTTTTTTTC-AATG-G-TATG--------ACATA-TATG----TCATCTGAG-TATACTAAAA------TTAATAA-T--A--TCACTTTGAGATGTCA-AACATGCTTGAAA---TCCAATGTCT---AAAA----TTA-C-ACTGG---AC-AATGC-AATCA-G----ACAACT-GA-TGGC-AACCTA------ATT---AACTTGATGCA--GCCGCT-GGGACCCCTTCCATT--ATCCCTCTTGT-C---TT-AAAATAATTAT-CTATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTCTTATCCTTTAATCAAA---TTCATCCAGAT-ATGATGATAA--A--TATCT-GGTTT-AATATGCTAATTAATAAC-ACGTTAGAAT--AATTTAAGTTGTAAT-AT-CATA-GCAGGTCATTAA---A--CTTTG-CGGTTAACACTTTAA-GCGCC------------------GTA--ATGATCGGG--TTC-GTATT--A-GCTA--TCGGGTTC------AGCT-ACGGGGAAGAGAAAAATTTATA--C-TGGTTGAC-CCGTCAGAGT-AACC-AGTT-TAC--GCG-CGA-TT-CT----AA---------CCTTT-GCGAGC-G-CCA-TGTTT----GAAACAAGGACGG-TGCA-GTGTTTA-GCGTTTTGTCCACA---GAATC--NNN------NNNNNN---NNNNNNNNNN----NN---NNNNNNNNNNNNNNNTGTACGA-TATTC-GAAGAG---TTG-A-TGCC-GAT----T-AA-AG-TGAG-T-GTTTA-GTTTTTTCTA-GTGCG--AATTATTT-TTAT-TTGA--CTTCTAAAAAGATCCGTGGG--CGAAAATTCCTTGG-------TATCTCCTTTGG-TGTA-A-TA--GGCT-------T-AGGTC------TTTATA--TT-CGTAA-T----TATT-G---C-AATTT---T-ATA--TTTT-ACAGGA-C-A--TTCT-CA-CG---A-TAACCAT----ATTCA--GA-AGTAACTG------GAAA-GA--TTG--TG-TAG-AAAAGGTTGA-CGCGAA-TTC--AATT-TTGCACAC-ACGC--GA-GT-CTGA--TCA---C----AC--A---GCAACG-----GGTGACA--TGT-A---CT--ATCTG-TG-A-TCA-TTA-T--CTAC-A--A-AGT--AACC---GTAAA--CAAG-A-AT-GGGA-A------AC--TT---AC-----ACCACCTTTATGAA-TTGAAGAAAAAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAA--AAATAAATGA--CAGAACAAAAAGAGTTGAACTTGTGGATTGTGAAT-AAATATTTGTGATTG---T--GA--T-GATCGTA--CAAGTA-TT-CTAC-GAGT--AGAATTT-TTA-TAGAAAAAATGAAG-----C-AAGTGCCGT-ATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGTGTGG-A-GGCTA--GAGAC-TGGA-GTAAGAAA---AAAATCCTGCTTT-TTG-AA----GAT--------ATC-GAAAT----TCTCT-TTCC-CA-CG-ATT-ATT--AATG----AAG--AAA-GCATTTAATT-ACAG-TTTG-----TATGACAT-ATTTTAAT-GC-G-CC----ATAAATTG---CGATC-AA-TGT-CTTTTCA-ATG-CATTTAAA--TTCATGATTA-TGA----TCATTTC-AATGCCGTCTA-ATGCA-A-CTTCAATGCT---A-ATTT-AAA--TG-C-AG-----TCTA-AT-GCAAGCTCTAAT-GC-AACTTC-AA-TGGG-AT--T-CCATGT-AGT--CTCAA---TGC--TA--TTCCACTGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTA-AA--TG--AAACT-G-TC-A-ATT-CAATGCT--TTTTTTCT-AAT---GC-ATCGTTC---CCTTT--ACAATTTT--TT---C---A--ATGT--T---ATGTCAATGC-TATTTT-C-ATGCTTTG----AATTAA-AA--AAT-GCT--AC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTttggtaagggaga
gi|3 : AGAGAAAAATACA--CATG-CT-AAA------------TATTT--GAGC-ATAATGAACATTGATGCACTTAAATA----TATGC-ATTAACATGTGAAAGTTTTT-ATTGAAACAGC---TTGAA--------AATG--GATTGAATTT--TTTCTCA---GTTTC-AAAAGAAA-A-TGATTTTTCTTGAGAATTGA--AA--TA---GCAG-T-TTTCAAACA---TA----A--------TTCTA--TTTC----A-TGCC----ACT-AAA-------GGC-----ATTATTTGA--AACT-T-TATTA--AATT----AAATG-CTACA---A-CGACA-----------------CA-T-TGAA--------------AAAAACAGTT-ATTTTTCA-AA-ACATTT-AAT-CTTTCTA-TTAG-TTGT--A-TTCAAATTGTTACAAATATTGCAATT--AAAA-GAT-CAT-TCATTTTC-AGAAATA----TACTTTTGTTTCAAATGCTCATATA-ATATCC-G-ATCTGTTTGGCGATGGTCAATTTAAGGACA-GCAAATTCAATGTTTAATTTAAGTTGTTAACC-TTGCATA-----CT-T--CCTCATACTTAGGATA----AATG---ATATAAT--AATGCA-CCTTCATC--AAAATGCAAAGTTTGTG-GCAAA--TTGA-TTTAAATG-AAA---AATT-AATCGT--AAC-----AGCTATCACAA--AGTTTCAC--AACTTTTTCTTAAATATTTA--ATAAAAATAATTTACAGCTGAAGCAA--TTAATT---AC--AC-CGTTAT-GCTTATC-AC---AAC--TTT--TAAACAACATGT--TTCATTATACTGATT---AATTTTTATGCTGTTG------AGATTAACT-TACTAATTAT
gi|3 : TTCAAATCAAT-A-AAGAATTATAAG--GAACTATTTG----TTTTTCTTTG-GTAATTC--CTGA-TTCAT-TAA---TCTTTATATTAG-GACTTGGGTAAAGAAAA---AAA-----------ACCTTTAATT-TTTTCTT----CTG--TATAT----AGAAATTTTTTC------ATGAGGTATT--------TCTTAATATG----ATATCTGAGCTATACTAAAAAACTAATAAATAA-T--A--TCACTTTACGAGATCA-A-CATGCTTGGAA---TCCAATGTCT---AA------TTA-TTACTGG---AC-AATGC-AATCA-G----ACAACTAGA-TG-C-AACTTT------ATA---AACTTGAAGCA--GC--CT-GGGACCCCTTC-ATT--AATTCT-TTGT-TTTATTTAAAATAATTATTCCATCAagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|3 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatTTATCCTTTAATC-AAAAATTCATCCAGATCATGAT-ATAA--AAATATCTTGGTTTTAATATGCTAATTAATAA-CACGTT--GATT-AATTTAAGTTGTA-T-A-TCAT-AGCAGGTCATT-----AAACTTTA-CGGTTAA-ACT---AAGCGCT------------------GTA--ATGATCGGG--TTC-GTATT-TA-GC-A--TCGGGTTCAC---AAGCT-AC-GGGAAGAGACACATTT-AAA-C-T-GTTGAC-CAGTCAGAGT-AACC-AGTT-TAC--GC--CGA-GTACC----AA---------CCTTTGGCGAGC-G-CCA-TGTTA----GAAACAAGGACGG-TGC------TTA-CCGTTTAGTCCACA---GAATCT-GTC------GGAAGGATCGTTCAGATAA----CA---CCTGTGCGCGTTCCATGTACTACTATTA-TTAGAGAGTTAG-ATTGCCTGACTAAATAAA-AG-TGAGCTGGTTCATATTATCCTTATGTTCG--AAT-ATTA-T--T-TTGA--C-TCCAAAAGCATCCGTGGG--C-AAAATTCCTTGG-A-----TATCTCCTTAGC-TGTAGA-TA--TCCTAAGTATGT-ATGTTTCCTTGTTTATAATTT-CTTAA-TTTAATATTGA---CAAATTTGACTAATAATTTTT-ACAGAA-TAA--TTCT-TC-CGACCA-TTAACATCATAATTCA--GATAGATACGA------GAAATGACTTTG--TG-TAC-AAAA-GTTGA-CGCGAA--TC--AATT-TTGCACAC-ACGC--GA-GTCCTGA--TCGATTC----AC---T--GCAATATCCTCAATCATA--TAT----------TCTGTTGTA-CCA-TAA-TCACTAC-ACCACAGTAAAACCACGATAAA--CCAG-ACATCGCGATA------AC--TTTACAC-----GCCACTGTTAaatattatattatattgtttattgctttatcctttaatcaaaaattcatccagatcatgatataaaaatatcttggttttaatatgctaattaataacacgttgattaatttaagttgtatatcatagcaggtcattaaactttacggttaaactaagcgctgtaatgatcgggttcgtatttagcatcgggttcacaagctacgggaagagacacatttaaactgttgaccagtcagagtaaccagtttacgccgagtaccaacctttggcgagcgccatgttagaaacaaggacggtgcttaccgtttagtccacagaatctgtcggaaggatcgttcagataacacctgtgcgcgttccatgtactactattattagagagttagattgcctgactaaataaaagtgagctggttcatattatccttatgttcgaatattattttgactccaaaagcatccgtgggcaaaattccttggatatctccttagctgtagatatcctaagtatgtatgtttccttgtttataatttcttaatttaatattgacaaatttgactaataatttttacagaataattcttccgaccattaacatcataattcagatagatacgagaaatgactttgtgtacaaaagttgacgcgaatcaattttgcacacacgcgagtcctgatcgattcactgcaatatcctcaatcatatattctgttgtaccataatcactacaccacagtaaaaccacgataaaccagacatcgcgataactttacacgccactgtta
gi|4 : agagaaaaatacacatgctaaatatttgagcataatgaacattgatgcacttaaatatatgcattaacatgtgaaagtttttattgaaacagcttgaaaatggattgaattttttctcagtttcaaaagaaaatgatttttcttgagaattgaaatagcagttttcaaacataattctatttcatgccactaaaggcattatttgaaactttattaaattaaatgctacaacgacacattgaaaaaaacagttatttttcaaaacatttaatctttctattagttgtattcaaattgttacaaatattgcaattaaaagatcattcattttcagaaatatacttttgtttcaaatgctcatataatatccgatctgtttggcgatggtcaatttaaggacagcaaattcaatgtttaatttaagttgttaaccttgcatacttcctcatacttaggataaatgatataataatgcaccttcatcaaaatgcaaagtttgtggcaaattgatttaaatgaaaaattaatcgtaacagctatcacaaagtttcacaactttttcttaaatatttaataaaaataatttacagctgaagcaattaattacaccgttatgcttatcacaacttttaaacaacatgtttcattatactgattaatttttatgctgttgagattaacttactaattatagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcaaatcaataaagaattataaggaactatttgtttttctttggtaattcctgattcattaatctttatattaggacttgggtaaagaaaaaaaacctttaattttttcttctgtatatagaaattttttcatgaggtatttcttaatatgatatctgagctatactaaaaaactaataaataatatcactttacgagatcaacatgcttggaatccaatgtctaattattactggacaatgcaatcagacaactagatgcaactttataaacttgaagcagcctgggaccccttcattaattctttgttttatttaaaataattattccatcaaatattatattatattgtttattgctACTTTAACGGTAAAC---TTAAAGCGCTCATCAGTATTGTTTTTATGTATCATGATCGGG--TTCTGTATT-TA-GC-A--TCAGGGTT-C---AAGCTTACGGGGAAG-GAAGAATTTAAAAAC-TGGTT-ACACCGTCAG-GT-AACC-AGTTATACCCGCGGCGA-TT-CT----AAATTCTAAAACGTTG-GCGAGCCG-CCAATGTTT----GAAGCAAGGACGG-TGCAAGTGTTTTTGCGTTTTGTCCACA---GAATCTGGTC------GGAGAG---GAATCGATAAGAA-CA---CCTGTGGGT----CATGTA--A-TATTCCAAAGGAAGTTTG-A-TGCC-GAT----TAAACAG-TGAG-TGGTTTA-ATTTTTTCTG-GTGCG--AATGATTTAT--TGTTGA--CTTCCAAAAAGATCCGTGGGGGCGAAAATTCCTTGG-AC----TA-CTCCTTTGG-TGTA-G-TA--GGCT-------TTAGGTCT-----TTTATA--TTTCGTAAAT----TATTTG---C-AATTT---TAATA--TTCT-ACAGGA-C-A--TTCTTCA-CG---A-TTACCAC----ATTCA--GA-AGTAACTG------GAAAAGGC-TTG--TG-TAG-AAAAGGTTGAACGCGAAATTC-------TTGCACACCACGC--GA-GT-CTGACATCA---CTGCAAC--AC--GCCACA-----GGTGACA--TGTGA---CT--ATCTG-TG-AATCA-TTA-TC--TACCA--AAAGT-AAACC---GTAAA--CAAG-A-AA-TGGA-A------AC--TT---ACAAAAAACCACTTTAATGAAGTTGAGGAAAAA
gi|4 : catttATTGTGAACCATTACGAGGCAG---AAACAA--CCACAACACACACACGTCTGTGTGAACTCAATAAATGA--CAGAACAAAAGAGATTG-------GGATTGTGAAT-AA-TATTTGTGATTG---TTGGA--TTGATCGTAAACAAGTA-TT-CTAC-GAGT--A-AATTTGTTAATAA-GAAGATGAAG-----CCAAGTGCCGT-ATT-----TGAATTG---------TGT-GTTGA-TAAATTGGGTGTGG-ATGGCTA-GG-GAC-TTAA-ATAAAAAA---AATTTCCTGCTTTATTG-AA----GAT--------ATCCGAAAA----TCTCTCTTCC-CAAGG-ATT-ATT--AATGC---AAG--AAAAGCATTTAATGAACAGTTTTG-----TATGACATCATTTGAAT-GCGG-CCATAAATAAATTG---C-ATCAAA-TGTCCTTTTCACATGCCA-TTAAATGTCCATGATTA-TGA---CTCATTTCAAATGCC--------------CTC-AATGCTA--A-ATTTAAAA--TGCC-AG-----TCTATAT-GCAAG-TCTAAT-GC-AACTTCAAA-TGGG-AT--T-CCATGTAAG----TTAA---TGC--TAATTTCCATTGCAA---T-CTATAATG--C----------CTTTTAAAT-----GC-----TA------GTGCCATG---CTTTTTCAAA--TGAAAAACT-GTTC-C-ATT-CGATGTT--TATTTTCTAAAT---GC-C-AATTCG--CCTTT--AC-ATTTT--TT---CAGAA--ATGT--T---ATGGCAATGA-TATTTCAA-ATGCTTTG----AAT--A-AA--AAT-GCTAAAC-T--TCAATGCAAAATC-A-TG-CAGTTCTTTccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaattgtgaaccattacgaggcagaaacaaccacaacacacacacgtctgtgtgaactcaataaatgacagaacaaaagagattgggattgtgaataatatttgtgattgttggattgatcgtaaacaagtattctacgagtaaatttgttaataagaagatgaagccaagtgccgtatttgaattgtgtgttgataaattgggtgtggatggctagggacttaaataaaaaaaatttcctgctttattgaagatatccgaaaatctctcttcccaaggattattaatgcaagaaaagcatttaatgaacagttttgtatgacatcatttgaatgcggccataaataaattgcatcaaatgtccttttcacatgccattaaatgtccatgattatgactcatttcaaatgccctcaatgctaaatttaaaatgccagtctatatgcaagtctaatgcaacttcaaatgggattccatgtaagttaatgctaatttccattgcaatctataatgccttttaaatgctagtgccatgctttttcaaatgaaaaactgttccattcgatgtttattttctaaatgccaattcgcctttacattttttcagaaatgttatggcaatgatatttcaaatgctttgaataaaaatgctaaacttcaatgcaaaatcatgcagttctttttgtaagg
gi|5 : catttactttaacggtaaacttaaagcgctcatcagtattgtttttatgtatcatgatcgggttctgtatttagcatcagggttcaagcttacggggaaggaagaatttaaaaactggttacaccgtcaggtaaccagttatacccgcggcgattctaaattctaaaacgttggcgagccgccaatgtttgaagcaaggacggtgcaagtgtttttgcgttttgtccacagaatctggtcggagaggaatcgataagaacacctgtgggtcatgtaatattccaaaggaagtttgatgccgattaaacagtgagtggtttaattttttctggtgcgaatgatttattgttgacttccaaaaagatccgtgggggcgaaaattccttggactactcctttggtgtagtaggctttaggtcttttatatttcgtaaattatttgcaattttaatattctacaggacattcttcacgattaccacattcagaagtaactggaaaaggcttgtgtagaaaaggttgaacgcgaaattcttgcacaccacgcgagtctgacatcactgcaacacgccacaggtgacatgtgactatctgtgaatcattatctaccaaaagtaaaccgtaaacaagaaatggaaacttacaaaaaaccactttaatgaagttgaggaaaaaccctcatttttttccgtaatctatcaggaatatggagtgcattgctgccaagggattgtgccacctcactaaaaacgtcgaggctttcaaaggtgtccggtaaccaatttgaaggattatagcagttgaAAATTGGGTGTGG-ATGGCAA-GGAGACTTAGT-GTAAAAAA---AAAAttgtaagg
gi|5 : TA-TGA---CTCATTTC-AATGCT--TTACATGCATATCTT------T---A-ATTT-AAA--TG-CCAG-----TCTA-AT-GCAAG-TCTAAT-GT-AACCTC-AA-TGGG-AT--TCCCATGT-AGT--CTCAA---TGC--TA--TTCCAATGCAA---TAC--TAATG--C----------CTTTT-AAT-----GC-----CA------GTGTCATG---CTTTTTC-AA--TG-AAAACT-G-TC-A-ATT-CAATGTT--TATTTTCT-AAT---GC-A-AGTTC---CCATT--AC-A-TTT--TT---CA-AA--ATGT--T---ATGGCAATGC-TATTTC-A-ATGCTTTG----AAT--A-AA--AAT-GCT--TC-T--TCAATGCAAAATCAA-TG-CAGTTCTTTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgactcatttcaatgctttacatgcatatctttaatttaaatgccagtctaatgcaagtctaatgtaacctcaatgggattcccatgtagtctcaatgctattccaatgcaatactaatgccttttaatgccagtgtcatgctttttcaatgaaaactgtcaattcaatgtttattttctaatgcaagttcccattacatttttcaaaatgttatggcaatgctatttcaatgctttgaataaaaatgcttcttcaatgcaaaatcaatgcagttctttttggtaaggga
gi|6 : aaattgggtgtggatggcaaggagacttagtgtaaaaaaaaaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGAGAAAA-TA-A--C-TG-CTTAAACAGGATACGGTGT--TT--G--C-AT--TGAA----GATTCA-TTAAA-A----T-TGCTATTAA-ATGGAAAAGTTTttggtaaggga
gi|6 : A-TG-TTTGGCTTGAGAATTTGCTAA--TA---GCAGGTGTTTCAAAAAA-TTACCGTATGACGAATTGCTA--ATTTCTGCAATGCCTAGAACTAGAAGAA---GGGCATTTAATTATTTGA--AACT-A-TA-TAAGAATTTGAAAGATGCCTACAGTTA-CGACAGCACGGTGGTTTCGCCCCAGT-TGAAGATGTTGAAGTGAGAAGAACAGTTCATTTTTCAG-A-ACATTTCAATGCTTCTTATTAAG-TTGT--AGTTCAAG-Tgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgatgtttggcttgagaatttgctaatagcaggtgtttcaaaaaattaccgtatgacgaattgctaatttctgcaatgcctagaactagaagaagggcatttaattatttgaaactatataagaatttgaaagatgcctacagttacgacagcacggtggtttcgccccagttgaagatgttgaagtgagaagaacagttcatttttcagaacatttcaatgcttcttattaagttgtagttcaagtcgcgcatgttcaggattgtgt
gi|7 : tagagaaaataactgcttaaacaggatacggtgtttgcattgaagattcattaaaattgctattaaatggaaaagtttgtacagttgagaccgacggagcgaacgcctcgtgaaaagggcagtgtgaagtttgtgtctcttgttcaaatgaggtcaggtttcaagaaagaaagcgtgtgtagaggcgaccgatacgctaattgagtttttctctgTTGTGA-CCATTACGAGGCAG---AAACA----CAC----------CGTCTGTGTGAAC-CAATAAATGA--CAGAACAAAAG-AGTTGAACTTGTGGATTGTGAAT--AATATTTGTGATTGTGAT--GA--T-GATCGTAG-CAAGTA-TTGCTACGGAGTA-AGAATTT-TTA-TAG-AAAAATGAAG-----C-AAGTGCCGTAATT-----TGA-TTG---------TGT-GTTGA-TAAATTGGGGGTGG-TGGGCAAGGGAGAC-TAGT-TCAAAAAG---AAAATTCTAATTT-TTGAAA----AAT--------ACC-GAAATCTACTCTCT-TCCC-CA-GGCATT-CTTTAAATGC---AAGAAAAAGGC-TTTTATTAACAG-TTTcgcgcatgttcaggattgtgt
gi|9 : CATTTAAATGT-CATTA-----GA---CTCATTC---ATGCC--AAA-ATGCA------------T---ATATTT-AAA--TG-CTAG-----TCTA-ATTGCAA--TCTAAT-GC-AACCCC-AA-TGG--ATCATCCCATGT-AGT--CTCA------T--CA--TTCCA-TGCA------C--TAATG--C----------CTTTT-AAT-----GC-----CA---------TCATG---CTTTC----A--TGAAAAACT-G-TC-A-ATCACA----T--TATTTTCT-AAT----C-A-AGTTC---CCAT---AC-ATTT--------CA-AA--ATTT--T---ATG-CA-TGC-GATTTC-ATATGCTATG----AAT--AGAA--AAT-GCT---C-T--TCAATGCAAAATCAA-TG-CA-TTCTTTtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): ACCACTTTTATTGTGAATTGAGGAGATATAACTCATTTTTTCCTTGTCGATAACATACTCAGGAGTAGAAGTGCAATTCGCCGCCAGGGATTGTTGCCACTAAAAACTGTCCCGAACAGGGATGAGGGCGGATGTGCTGATTTCAAGAGCGTTGTAACGTGTGTATAGATAGAGTATAAGCAGTGAATTCTAAGCCTCTCTACGATGCTAAGCAAAATACACTTTATCTCTGTTCTGTTCGTGATACACATTTACTCATCACTAGAACAAAAATGAGTTGGCGTGTATTGTA
Unaligned ( gi|17 ): TGTTTAACATCAGTTTTATAGATAAGAAACA