lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 1111 22222222222222222222222222 11 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 111111111 1 111111 3333333333333333333333333333333333333333 111111111111111 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111 1 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 222222222222 1 1111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 4444444444444444444444444444444444444 111111111 1111111111111 1111111111111111111 222222 1111111111 1111
lowQualScore : 0 1 1 33 2 2 8888 8 6666 22 44 44 22 5555 66666666666666 4 1 666 00000000000000000000000000 222 5555 11 5 2222 33 1 77777 1 11 11 1 3333 11 444 1 1 11 1 66 1 6666666666 1 4 1 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1 11 1 7777 1 22222 33333 111 4444 11 11 55555 2222 2 3333333 2 111 1 111111111 1 22 11 1 1 1 4444 33 2 2222 2222 111111 22 1 11 1 1 333333 333 0000000000000000000000000000000000000000 11 1 1 2222222 1 1 0 3 333333333333333 1 1 1 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 1 0 6666 22 22 22 1 444 333 3333 9 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 000000000000 1 33 2 88888 2 9999 2 555555 77777 2 5 2 22 7777777777 333 2 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 4 33 2 7777 2 7777777 5 8888888 99 88 8 7777777777777777777777777777777777777 111111111 5555555555555 22 1 555 22 5 33 5 6666666 7777777777777777777 4 4 222222 2 1111111111 4 2222 2 0 2
lowQualScore : . . . .. . . .... . .... .. .. .. .. .... .............. . . ... .......................... ... .... .. . .... .. . ..... . .. .. . .... .. ... . . .. . .. . .......... . . . . .................................................................................................................................... . . .. . .... . ..... ..... ... .... .. .. ..... .... . ....... . ... . ......... . .. .. . . . .... .. . .... .... ...... .. . .. . . ...... ... ........................................ .. . . ....... . . . . ............... . . . ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... . . .... .. .. .. . ... ... .... . . ...................................................................................................................................................................................................................................... ............ . .. . ..... . .... . ...... ..... . . . .. .......... ... . ............................................................................................................................................................................................................................................................. . .. . .... . ....... . ....... .. .. . ..................................... ......... ............. .. . ... .. . .. . ....... ................... . . ...... . .......... . .... . . .
lowQualScore : 0 0 7 77 5 5 1111 2 7777 55 66 00 22 0000 99999999999999 6 5 999 44444444444444444444444444 444 3333 99 9 9999 22 2 22222 2 44 66 8 9999 88 777 3 3 88 3 88 3 5555555555 3 0 5 5 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 1 1 66 1 1111 1 88888 88888 888 1111 44 44 11111 4444 2 5555555 1 888 0 666666666 1 33 44 2 1 1 7777 66 2 2222 4444 999999 66 1 55 1 1 333333 111 9999999999999999999999999999999999999999 88 3 3 9999999 3 3 4 7 555555555555555 4 4 4 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 4 3333 22 22 22 6 444 000 9999 7 4 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 222222222222 2 22 4 22222 4 4444 0 888888 88888 3 8 7 99 6666666666 777 2 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 4 22 4 5555 2 6666666 0 1111111 33 00 6 7777777777777777777777777777777777777 444444444 4444444444444 55 8 777 55 5 11 2 2222222 2222222222222222222 2 2 444444 2 9999999999 4 5555 5 4 5
consensus : CATGACGTGTAAAACGTTG--CAATA-T-TA---TACAA----ATC--TTG--AT--TT--AT----ATGC----------G---A-AAA-TCT---T----GA--------------------TTT---A----TAT--TCGA----TAAT-C-TTG-T---T-ATTC-A--TAT----GC--G---A-A-A--A-TCTTG--A-T-------TT-A-TATTCGA-T-AA---T----NT-N--AATATT-TA--T-ACA-----------G------TG----TA-TGC--GA--TA------A--ATN-T--TG----AT---T-----A-TA-----------T-G-----CGA-----AA-A-TC--TT-G----A-T-----T-----T---A----TA--T--TC----GA----T-A-------A-TCT---T-G-----T---T-ATTC-A--TAT-G-CG---A--A-AAT--C-TT----GN-----T--T-T--A-TAT-TC----G-AT---A-----------A-----------T----N-----T-T---G--A-T-AT----T--T-AT-ATGCGA----TA-AA----TCT-TG-A-T----------A---AT-TCCG-GT-AC--A---AA-T---TNGA-----T-TT--------TATG--CGAT-A-A--TC-TT-G--AT-TTN---TA--TNCGA-T-A------A-TC-TTG----ATT-T----TTN------------TNTA----C---GATA---A-TC---TTG----A---TT----TAT--------AN---T----C-GA------T-------AA-T------C--TTTTTA--TTTAT-ATT--CGA-T-AA-TCTTG-TTATTT-AT----------ATTCGA-T-AATC---TTG-------T--TA--C----ATG--T------------ATAT--AT-A-TT-CGATA---A-TCTTG--AC---TAATATNT---ATATNC-AAAATCTTG-------TTA----T------NTATA------TTCGAT-AA-TCTTGTT-----A-------------TA---T--ATATTC--GATAA-TCTTGTTAT--ACAT---ATTCGATAACCTTGCTATTTATATGCGAAAATTTAGTTGTATATATGACAATCGTGATGTTTATATGCGAACATGTTTATGTGTATTCGATTGT-------ATATTCGA----TAA-TCTTG-TTATNTNTATAT---TCC--GAAAANT-TT-G--ATTTATA----NCCGAT-A-----A-TC----T-T--CG-T--A---CG----CTTG-AT-AA-------T---------C--AT--A-------TTCG--A------T---C--GAT---AATCTTGATATTTATATGCGAT---AAATC--TTG--AT--T-T---ATAT---T----CGAT-AATC-T---T---A-T-T--T-TATA-TTC-G--AT-A-NTC---T-TGT---T-ATTTA-TATT-CGAT-----AA---TNTTG-T-TATTTAT---------ATTC--GA-T-AAT-CTT---C-TG----------AT--NTATA--TTCG-A--TAAATCTTGATT--TAT---ACGCNGTAAATT-----GCA-AT-AATTT----TT-C-TGCA-AT-------TN----ATAT---------AN-ATATCAA--GA-TT-----AT-C--GNATATA-A------AT-----CAAGATTTATCGNAT--AT---NAATAN-CA---AGATTAT------C----GAA---T---------------A---T----CAA---------A------------TATAAAT----A----AC-AAGA-TT-ATC--GAAT-------A---C---A------------TA--NA------TA-N------CAA---GA-TT-ATC--G--AATATA---------A--AT--C-AAGA--TTA----T--CGCAT-------T----------AAT------TTTCGCATATAAA--T-AN---CAAGATTATCGA-------ATATAA-------A-TCAAG-ATTT-T------C-----------GCA-------A----A---AA---------TAAA--C-----GT---TG--CA-AT---A--T-TAC-A-CAA-------AT----------------C--TTGA-T-TNN----TAT-GC----------AA-AAATCTTG---A-TTTAT-ATTCGATAATCT
Reference ( gi|1 ) : CATG-TATGTAAAATGTTG--CAATA-T-TA---AACGA----ATC--TTG--AT--TT--AT----ATGC----------G---A-AAA-TCT---T----TA--------------------TTT---A----TAT--TTGA----TAAA-C-TTG-T---T-ATTC-A--TTT----GC--G---A-A-A--A-TCTTG--A-T-------TC-A-TATTCAA-T-AA---T----AT-G--AATATT-TA--T-ACA-----------G------TG----TA-TGC--GA--TA------A--ATG-T--TG----AT---T-----A-TA-----------A-G-----CGA-----AA-A-TC--TT-G----A-T-----T-----T---A----TA--T--TT----GA----T-A-------A-TCT---T-G-----T---T-ATTC-A--TTT-G-CA---A--A-AAT--C-TT----GT-----T--T-T--A-TAT-TC----A-AT---A-----------A-----------T----A-----T-G---G--A-T-AT----T--T-AT-ATGCGA----TA-AA----TGT-TG-A-T----------A---AT-TCCG-GT-AC--A---AA-T---TAGA-----T-TT--T-----TGTG--CGAT-A-A--TC-TT-G--AT-TTT---TG--TGCGA-T-G------A-TC-TTG----ATT-T----TTC------------TTTA----C---GATG---A-TC---TTG----A---TT----TAT--------AA---T----T-GA------T-------GT-T------C--TTTTTA--TTTAT-ATT--CAA-T-AA-TCTTG-TTATCT-AT----------ATTCGA-T-GATC---TTG-------T--TA--C----ATG--T------------ATAT--AT-A-TT-TGATG---A-TCTTA--AC---TAATATAT---ATATTCTAAGATCTTG-------TTA----T------ACATA------TTTGAT-GA-TCTTATT-----A-------------TA---T--ATATTC--GATGA-TCTTGTTAT--ACAT---ATTCGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------ATATTCGA----TGA-TCTTG-TTATATATATAT---TCC--AAAAAAT-TT-G--ATTTATA----ACGGAT-A-----A-TC----T-T--CG-T--A---CG----CTTG-AT-AA-------T---------C--AT--A-------TTCG--A------T---C--GAT---AATCTTGATATTTATATGCGAT---AAATC--TTG--AT--T-T---ATAT---T----TAATGAATC-T---T---A-T-TTCT-TATG-TTT-G--AT-A-TTC---C-TGT---T-ATTTA-TGAT-CGAT-----AA---TATTG-T-TATTCAT---------ATTT--GA-T-AAC-CTT---C-CA----------AT--CTGTA--TTCG-A--TAAATGTTGATC--TAT---ACACTGTAAATT-----GCATAT-AATTT----TTTCCTGCATAC-------TT----ATAT---------AC-ATATCAA--GA-TT-----AT-C--ATATATA-A------AT-----CAAGATTTATCGAAT--AT---TAATAG-CA---AGATTAT------T----GAA---T---------------A---T----CAA---------A------------TATAAAT----A----AC-AAGA-TT-ATC--AAAT-------A---C---A------------TA--CA------TA-G------CAA---GA-TT-ATG--G--AATGCA---------A--AT--C-AAGA--TGA----T--CGCAT------TT------T---AAT------TTTTGCTCATGAA--T-AT---CAAGATTATTGA-------ATATGA-------A-CCAAG-GTTT-T------C-----------ACA-------A----A---AA---------TAAA--C-----GT---TG--CA-AT---A--T-TAC-A-CAA-------AT----------------C--TTGA-T-TAT----TAT-GC----------AA-AAATCTTA---A-TTTAT-ATTCAATAATCT
gi|8 : CATGACGTGTAAAATGATG--CAATG-T-TA---CACAA----ATC--TTG--AT--TT--AT----ATGCAAAAAAAAATA---A-AAA-TCT---T----GA--------------------TCT---G----TAT--TT
gi|15 : gggta-TGTGTAAGACGTTA--CAATA-T-CA---TACAT----GTC--TTG--CT--TC--AT----ATGC----------G---A-AAA-TCT---T----GC--------------------TTT---A----TAT--TCGA----TAAT-T-TTG-A---T-ATTT-A----T----GCAAA---A-A-A--A-AATTG--A-T-------T----------A-T-AA---T----AT-A--AGTAtctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcattagtattcgataatttggttatttcttcagtaaaaatcttgttttatttcgataatctttatatctatgtgcgaaaatcttgatttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|3 : cacATG-AAAACTTTG--CAA-A-C-TAT--AACAA----ATA--T----AT--TT--AT----ATGC----------A---A-AAA-TTT---T----GA--------------------TTC---A----TAT--T-------CAAA-T-CTG-A---T-ATTC-A--TAT----GT--G---A-A-A--A-TTTTG--A-T-------TA-ACTATTTA
gi|2 : cTGTAAAACGGTG--CAATA-T-TA---TACAA----ATC--TTG--AT--TC--AT----ATGC----------G---A-AAA-TCT---T----GA--------------------TTT---G----CAT--TCGA----TAAT-C-TTG-A---T-GTTT-A--TAT----GC--G-----A-A--T-TTTTT--A-T-------GT-A-TATTCGG-T-AA---T----CT--------------------------------------TG----T--TGC--A----A------A--AGA-T--TG----AT---T-----T-T--------------------CGAT----AA-A-TC--TT-GTT--A-TTTAAAT-----T---A----CA--T--TC----TA----T-A-------A-CCT---T-G-----C---T-ATTT-A--TAT-G-CG---A--A-AAT--T-TA----GT-----T--G-T--A-TAT-AT----G-AC---A-----------A-----------T----C-----G-T---G--A-T-GT----T--T-AT-ATGCGA-----A-CA----TGT-TT-A-T----------------------GT-GT-------A-T---TCGA-----T-------------TG--TGAT-GTA--TA-T-----AT-T-----------CCA-C-A------A-TC-TTG-----TT-T----TTT------------TTTATGTGC---GAAC---A-TT---TTG----A---TT----TATATACGGTAAA---T----TCGA------T-------AA-T------C--TTGTAA--TTCAT-ATT--CGA-T-AA--CTTtatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaattcttgttatatatacatgtatttgataatctcgctattcatattcgatcatcttgttgtatatcgatatcttgatcattatgtgcaacatattcatatgcgataatcttgattatacattcaataaatcttgatttatatt
gi|2 : cgTGTAAAACGTTG--CAATA-T-TA---TACAA----A-----TG--AT--TT--AT----ATTC----------C---A-TAA-TTTGG-T----TATTCATATCCATAACTCTTGTTTT---A----TAT--TTGA----TAAT-C-TTG-A---T-ATCA-A--TAT----GC--G---A-A-A--A-GTTTG--A-T-------TT-A-AATGCGT-T-AAGT-T----ATCG--AATATaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|4 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcTGTAAAACGTTG--CAATA-T-TAC--AACAA----GTCCTTTG--AT--TT--ATA---ATGC----------G---G-AAA-TCTCGGT----TT--------------------TGT---A-----AT--TCGG----TAA----TTG-------GTTT-A--TTTTAAGGC--A---A-A-A--A-TCTTG--ACT-------TT-A-TATTCGA---AA---T----CT-T--GTTATT-C------CA------------------------TA-TGC--GA---A------A--ATC-T--TG----ATC--T-----C-TA-----------T-T-----CGA-----TA-T-TT--TT--------T-----T-----T---A-----A--T--TT----AA----T-ATGCAGAGA-TTT---T-G-----------ATTC-A--AAT-G-CG---AT-A-AATTCT-TT----GA-----T--T-T--A-TAT-TT----G-AT---G-----------AT----------T----T-----T-G---A--A-T-AA----T--T-AT-AC--------T----------T-TG-A-T----------A---ATCTTTG-TT-AT---------T---T--A-----T-TT--T-----T-----CGAT-A-A--TC-TT-G--AT-ATTAA-TA--TTCAACT-A------A-CC-GTG-----TG-T----CTA------------TTTA----C----ATGTATA-TTCAATTG----AT--TT----TAT--------AT---T----C-GA------TACCATTAAT-T------T--TTGTTAATTTTATAATT--CGA-T-AA---------ATTTAAT----------ACTCGA-T-AACC---TTgagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|12 : TGCAAAACGTTG--CAATG-T-TG---TACAA----A-C--ATC--ATC-CC--AT----GTGC----------G---A-TAA-TCT---T----GA--------------------TTT---A----TAT--CCAA----TAAT-C-TTG-A---T-ATTT-C--TAT----GC--A---A-A-A--A-CTTTG--A-T-------TT-A-TATTTGA-T-AA---C----CT-T--GACATT-CAATT-GCATATTCTTT---GATT---TG----TA-GTC--CATTTA------A--ATG-T--TG----AT---T-----G-TA-----------A-C-----CGA-----TA-A-TC------------T-----T-----T---A----TA--T--Ttgaatatcaatatgcga
gi|9 : ctTGTAAAAAGTTG--CAGTG-T-TG---TACAG----ATG--TTG--AT--TT--AT----ATGC----------A---A-AAA-TAT---T----CA--------------------TCT---G----TAT--TCGA----TAAT-T-TTA-T---C-GTTT-A--TAT----GC--G---A-A-A--A-CTTCG--A-TAAAGTTATCTA-TGTGCCA-A-AA---T----AT-T----TATT-TA--T-ACATCAATAATATCG------TG----TG-TA--------A------A--AGG-T--TGCAATAT---T-----A-TATA---------A-ATCATTCGAT----AATA-TT--TT-A----A-T-----TA----T---A----CAATT--TT----GA----T-A-------A-TCT---T-G-----C---T-ATGT-A--TAT-G-CA---A--A-AAT--A-TT----TA-----T--T-T--A-TATCTG----A-AA---A-----------A-----------TCTAGA-----T-A---G--A-T-AT----T--C-GA-ATAC-A----CA-AA----TGA-TT-A-T----------A---GT-c
gi|20 : ttatggcgTGTAAAACGTTG--CAATA-T-CA---TATAA----ATC--TTG--AT--TT--AT----ATGA----------A---A-GAA-TCT---T----GA--------------------TCT---A----TAT--TCAA----CAAT-C-GTA-A---T-ATCT-A--TAT----GC--
gi|11 : ggcgTGTAAAATGTCG--CAATA-T-TATATAATAATTATATC--CTC--AT--GT--AT----ATGC----------G---A-AAA-TCT---T----GA--------------------TTT---T----TAT--TCGA----TATT-C-TTG-T---C--------------------------A-A--A-TCTTC--A-A-------TC-A-TATTCAA-T-AA---T----
gi|19 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaacggcgTGTAACACGTTG--CAACAAT-CC---TACCA----ATT--TTG--AT--TT--AC----AGGT----------G---C-AAA-TCT---T----GA--------------------TTT---A----TAT--C--A----TAAA-C--CG-T---T-AT---A--TTT----c
gi|5 : cgtatgaagTAAAACACTG--TATTA-T-TA---TATAA----ATC--TTG--AT--TT--AT----ATGC----------A---A-AAA-TCT---T----GA--------------------TTT---A----TAT--TTGA----TAGT-T-TTA-TCAAT-ATTC-A--TAA----AC--G---A-A-A--A-TCATA--A-T-------TT-G-TATTC-----AA---T----AT-A--AGC-TT-GA--T-ATA-----------G-------A----CA-TGC-------A------A--ATT-T--TG----A-----------------------------------A-----AA-----------------------T-----T---A----TA--T--TC----GA----C-A-------A-TCTCAAT-G-----TC--T-ATAT-A--TGT-G--A---A--A-ATT--T-TT----ATATATGT--T-T--A-TAT-TC----A-AT---A-----------A-----------T----C-----T-T---GATA-T-AT----T--T-CT-ATTTGA----TATCA----TTT-TG-C-T----------AT--AT-ACTT-GC-AA--A---AATT---TTGA-----T-TG--G-----TATG--TGAT-A-A-----TT-A--A---------A--TGCAA-T-A------A-TC-ATG----Aa
gi|17 : aaaAAATCTTGGTTAATA-T-GT---AATAA----ATC--TTG--AT--TT--GT----ATTC----------A---A-TAA-TTTTG-T----TA--------------------TCT---A----TAT--TCGA----TAAT-C-TTG-T---T-ATTC-A--agattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|7 : tgatttatatgcgatAATCTTG--TAATC-TATA---TAC-A----TTC--TTG--AT--TTTCAT----ATGC----------G---A-AAAATCT---G----GA--------------------TTT---A----TAT--TCAA----TAAT-C-TTG-T---T-GTTT-A--TAT----GC--A---A-A-G--AGTTTTG--G-T-------TT-A-CATAAGA-T-AACCGT----ATTG--ATTATA-TA--T---------------G------TGCGAATAGTTT--GA--TA------A--ATC-T--TGTT--ATC--T-----A-TA-----------T-G-----CAA-----AA-A-TG--TT-G----A-G-----T-----T---A----TA--C--TC----CA----T-A-------A-TCT---T-G-----T---T-ACTG-A--AAT-G-CG---A--A-A-------------------T--A-T--A-TAT-TC----G-AC---A-----------A-----------T----cata
gi|3 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcactaaatcttgattaccagtatattcatgggaaaatcttttattaatgttcgatATTTTG--TATTA-T-TA---TGCGATA--AAG--TTG--AT--TA--AA----ATGC----------G---T-AAT-TCT---TGTTATA--------------------TAT---ACATGTAT--TTGA----TAAT-C-TCG-C---T-ATTC-A--TAT----TC--G---A-T-C--A-TCTTG--T-T-------GT-A-TA-TCGA-T-AT---C----TT-G--ATCATTATG--T-GCA-----------ACATATTCA----TA-TGC--GA--T-------A--ATC-T--TG----AT---T-----A-TA-----------C-ATT---CAAT----AA-A-TC--TT-G----A-T-----T-----T---A----TA--T--Tcttgtttcatttttatttatatc
gi|14 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcATA-T-TG---A--TA----ATC--TTATTAT--TT--AT----ATGC----------ATGCA-AAA-TCT---T----AA--------------------TTC---A----TAT--TTGA----TAAA---TCC-T---C-ATAC-A--TAT----G---G---T-A-A--A-TCTTG--A-T-------GT-A-TATTCGA-TCAA---TTTTGAT-GTCAATATT-TA--
gi|6 : A----ATC--TCG--AT--TT--AT----ATTT----------G---ATAAA-TCT---T----TA--------------------TTT---A----TGT--TCGA----TTAA-C-TT--T---T-ATTT-C--TGT----AC--G---ATA-A--A-TCTTG--A-T-------GC-A-TATTCA--------------AC-G--AATTTT-GA--T---------------G------TA----CA-TTC--AA--TA------A--ATC-T--------------------------------------------------AA-A-TC------------------------T---A----TA--T--TC----GA----T-A-------A-TCT---T-A-----G---T-ATTC-A--TGT-G-CA---A--A-ACG--C-TT----GA-----T--T-T--A-TAT-TC----A-AT---A-----------AACCTTGGTTTCT----ATGTTTT-G---A--A-T-TT----T--T-AT-ATTTGA----TA-AA----TCT-T
gi|17 : aaA----ATC--TTG--GT--TA--AT----ATGT----------A---ATAAA-TCT---T----GA--------------------TTT---G----TAT--TCAA----TAAT-T-TTG-T---T-ATCT-A--TAT----TC--G---A-T-A--A-TCTTGTTA-T-------TC-A-CATttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|21 : tgatttatatgcgataA----ATG--TTG--AT--TT--AT----ATTC----------G---A-TAA-TCT---TGA--TA--------------------TCT---A----TAT--GTGA-----AAA-T-TT--T---A-ATTC-A--a
gi|13 : ttA----ATC--TTGGTAT--TT--AT----ATGC----------G---A-A-----T---T----TA--------------------TTTTTCA----TAT--TCGACTAGTAAT-C-TTG-A---A-ATAT-A--TTT----GC------C-A-A--A-TTTTG--A-T-------TC-A-TATGCGA-T-AC---T----A--A--AATATT-GA--T---------------T------TA----TA-TTC--GG--TA------A--CCT-T--CG----A----T-----A-T---------------------------------TT--TT-GTT--A-T-----C-----T---A----TA--T--TC----GA----T-A-------A-Tttcggaaggctaaataaacaaa
gi|10 : tgtagtcgatA----ATC--TTG--ATGTTC--AT----ATGA----------G---A-AAA-TCT---T----GA--------------------TTT---AATA-TATAATCGA----TAAT-A-TGG-T---T-ATTC-A--TTT----AC--C---A-A-A--A-----A--A-A-------AA-A-TAATAAA-T-AA--------AT-A--AAT-TC-GA--TGATC-----------T------TG----T-----------TA------C--ATG-T--------AT---TC----A-TA-----------T-G-----CGA-----AA-A-TC--TT-
gi|4 : gacatgtgaaacgatttaatatcatttttgatttatacgatatatatatgatattcttc--TTG--GT--TT--ATTTTAAGGC----------A---A-AAA-TCT---T----GAC-------------------TTT---A----TAT--TCGA-----AAT-C-TTG-T---T-ATTCCA--TAT----GC--G---A-A-A--A-TCTTG--A-T-------CT-C-TATTCGA-T-AT---T----TT------TTTT-AA--T-TTA-----------A------T------A-TGC---A--GA------G--ATT-T--TG----AT---T-----C-AA-----------ATG-----CGAT----AA-A-TTCTTT-G----A-T-----T-----T---A----TA--T--TT----GA----T-G-------A-TTT---T-GAATAAT---T-ATAC----TTT-G------A--T-AAT--CTTT----GTTA---T--T-T--ATTTT-TC----G-AT---A-----------A-----------T----C-----T-T---G--A-T-AT----T--A-AT-ATTCAAC---TA-AC----CGTGTGTC-T----------A---TT-TACATGT-AT--ATTCAA-T---T-GA-----T-TT--TA----TATT--CGAT-A-C--CA-TT-A--AT-TTT---TG--Tacagctgttcaatatattacatcttgattggtatgcga
gi|17 : tgtaaaacgttgcaatattacaacaagtcctttgatttataatgcggaaatctcggttttgtaattcggtaaTG--AT--TT--AT----ATGC----------G---ATAAA-TCT---T----GG--------------------TTA---A----TAT--GTAA----TAAATC-TTG-------ATTT-G--TAT----TC--A---A-T-A--A-TTTTGTTA-T-------CT-A-TATTCGA-T-AA---T----CT-T--GTTATT-CA--C-ATA-----------taattttataattcgataaatttaatactcgataacctttgaatatcaatatgcga
gi|8 : TG--AC--CC--AT----ATGT----------G---G-AAA-TCT---T----CA--------------------TTA---G----TAT--TCGA----TAAT-T-TGG-T---T-ATTT-C--TTCA---GT--A---A-A-A--A-TCTTG--T-T-------TT-A-T-TTCGA-T-AA---T----CT-T--TATATC-TA-------------------------------TG-TGC--GA---A------A--ATC-T--TG----AT---TTATTCA-TAAACTCCGTGACA-G-----TGA-----AA-T-TT--TT-T----A-C-----T-----T---A----TT--T--TT----G
gi|18 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatg--AT----ATTC----------T---A-CGA-TCT---T----AA--------------------TTT---A----TTT--CCGA----TAAT-C-TCT-T---T-ATTC-A--TAT----GC--G---A-A-A--C-TCTTG--C-T-------TT---TATTcg
gi|21 : tggcgtgtaacacgttgtaC----------G---A-AAA-TGT---T----GA--------------------TTT---A----TAT--TCGA----TAAT-C-TTG-A---T-ATCT-A--TAT----GT--G---A-A-A--A-TTTTA--A-T-------TC-A-agcga
gi|16 : tt--------------------TTT---A----TAT--GCGA----TAAA-CCTTGAT---T-CTTC-A--TTT----GC--ATTCA-ATA--A-TCTTGTTA-T-------CT-A-TATTCAA-T-AA---T----AT-T--GTTATT-TA--T-gaaggctaaataaacaaa
gi|13 : gtT---G----TAG--TCGA----TAAT-C-TTG-G---T-ATTT-A--TAT----GC--G---A-A-TTTA-TTTT-------------TC-A-TATTCGACT-AG---T----A------ATCTT-GA------A-----------A------TA----TA-TTT--GC--CA------A--ATT-T--TG----AT---TC----A-TA-----------T-G-----CGATACTAAA-A-TA--TT-G----A-T-----T-----T---A----TA--T--TC----GG----T-A-------A-CCT---TCG-----A---T-ATT-----TTT-G------------------TT----A------T--C-T--A-TAT-TC----G-AT---A-----------A-----------T----caactataaacattaaca
gi|14 : ---A----TAT--T-GA----TAAT-C-TTA-T---T-ATTT-A--TAT----GC--ATGCA-A-A--A-TCTTA--A-T-------TC-A-TATTTGA-T-AA---------------ATCCT-CA--T-ACA------------------------TA-TG--------------------G-T--------------------------------------------------AA-A-TC--TT-G----A-T-----G-----T---A----TA--T--TC----GA----TCA-------A-TTT---T-G-----
gi|20 : A----TAAATC-TTG-------ATTT-A--TAT----GA--A---A-G-A--A-TCTTG--A-T-------CT-A-TATTCAA-C-AA---T----CG-T--AATATC-TA--T-Aatgtcaatattta
gi|11 : ggcgtgtaaaacgttgcaatatcat-C-TTG-T---T-AATC-A--TAT----GG--G---A-A-A--A-TATTG--T-T-------TT-G-TATTCGA-T-AA---TC---AT-G---TTATC-TA--T-Atgc
gi|15 : agcaagattatcgaatggagatgca-C-TTG-C---T---TC-A--TAT----GC--G---A-A-A--A-TCTTG--C-T-------TT-A-TATTCGA-T-AA---T----TT-T--GATATT-TA--T-GCA--------------------------------AA--AA------A--AAA-T--TG----AT---T-----A-TA-----------A-aaaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatgtatatgcgaaaatcttgatttttattcgatattcttgtcaaatcttcaatcatattcaataatc
gi|21 : cactacttata-TTG-T---TTATTT-AGCCTT----CC--G---A-A-A--A-TGTTG--A-T-------TT-A-TATTCGA-T-AA---T----CT-T--GATATC-TA-------------------------------TA-TGT--GA---A------A--ATT-T--TA----AT---T-----acatgtatgatattgtaacgtcttacaca
gi|7 : tttg---T-ATTC-A--T------GG--G---A-A-A--A-TCTTTT-A-T-------TA-A-TGTTCGA-T-AA---T----CTTGT-AATCTA-TA--T-ACA-----------T------TC----T----T--GA--T--------------T--T------T---C-----A-TA-----------T-G-----CGA-----AA-AATC--TG-G----A-T-----T-----T---A----TA--T--TC----AA----T-A-------A-TCT---T-G-----T---T-GTTT-A--TAT-G-CA---A--AGAGT--T-TT----GG-----T--T-T--A-CAT-AA----G-AT---A-----------ACCG--------T----A-----T-T---G--ATT-AT----A--T-AT-GTGCGA----AT-AG----T-T-TG-A-T----------A---AA-TCTT-GT------------T------A-----T-CT--A-----TATG--CAAA-A-A--TG-TT-G--AG-TTA---TA--CTCCA-T-A------A-TC-TTG-----------------------------TTA----CTGAAATG------C---GAA----A---TA----TAT--------AT---T----C-GACAATCTT-------GT-T------TCATTTTTA--TTTAT-ATa
gi|12 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcactaaatcttgattaccagtaC-A--TGT----GC--G---A-T-A--A-TCTTG--A-T-------TT-A-TATCCAA-T-AA---T----CT-T--GATATT-T------C-------------------------TA-TGC--AA---A------A--ACT-T--TG---------------------------------------------------------------A-T-----T-----T---A----TA--T--TT----GA----T-A-------A-CCT---T-G-----A---C-ATTC-A--ATT-G-CA---T--A-TTC--T-TT----GA-----T--T-T--G-TAG-TC----C-ATTTAA-----------A-----------T----G-----T-T---G--A---------T--T-GT-AACCGA----T--AA----TCT-TT-A-T--------------AT-TCc
gi|21 : cttgcaaaacgttgcaatgttgtacaaacatcatccTGTT-TA--T-TTA-----------G------CC----T--TCC--GA---A------A--ATG-T--TG----AT---TT----A-TA-----------T-T-----CGA-----TA-A-TC--TT-GAT--A-T-----C-----T---A----TA--T--GT----GA----A-A-------A-TTT---T-A-----------ATTC-A--
gi|10 : ttATT-TA--T-ACG-----------A------TA----TA-TATATGA--TATTCTTCA--ATC-T--TG----ATGTTC-----A-TA-----------T-G-----AGA-----AA-A-TC--TT-G----A-T-----T-----T---AATA-TA--TAATC----GA----T-A-------A-TAT---G-G-----T---T-ATTC-A--TTT-ACCA---A--A-AA--------------------------A-AA--------A-AT---A-----------A-----------T----A-----------A--A-T-A-----------------AA----TA-AA----T-T-CG-A-T----------G---AT-CTTG-TT-AC--A----------TGTA-----T-TC--A-----TATG--CGAA-A-A--TC-TT----AC-AGC---TG--TTCAA-T-ATATTACA-TC-TTG----ATT-aa
gi|4 : gacatgtgaaacgatttaatatcatttttg------TG----TAATTC--GG--TA------A--TTGGT--TT----AT---T-----T-TA-----------A-GG----CAA-----AA-A-TC--TT-G----ACT-----T-----T---A----TA--T--TC----GA------A-------A-TCT---T-G-----T---T-ATTCCA--TAT-G-CG---A--A-AAT--C-TT----GA-----T--C-T--C-TAT-TC----G-AT---A-----------T-----------T----T-----T-T---T--T-TAAT----T--TAAT-ATGC-A----GA-GA----TTT-TG-A-T---------------T----------C--A---AA----------------------------TG--CGAT-A-AATTCTTT-G--AT-TTA---TA--TTTGA-T-G------A-TT-TTGAATAATT-A----TAC------------TTT---------GATA---A-TC---TT----------------------------------------------T-------GT-T------A--TT--TA--TTT----TT--CGA-T-AA-TCTTG-ATATTA-AT----------ATTCAACT-AACC---GTGTGTCTATT--TA--C----ATG--T------------ATAT--TC-A-AT-TGAT--------TT-----------TATATTCGATACCATTAATTTTTG-------TTAATTTT------ATA-A------TTCGAT-AA-----ATT-------------------TA------ATACTC--GATAA-CCTTggtatgcga
gi|17 : tgtaaaacgttgcaatattacaacaagtcctttgatttataatgcggaaatctcggttt------TA----TA-TGC--GA--TA------A--ATC-T--TG----GT---T-----AATA-----------T-G-----TAAT----AA-A-TC--TT-G----A-T-----T-----T---G----TA--T--TC----AA----T-A-------A-TTT---T-G-----T---T-ATCT-A--TAT-T-CG---A--T-AAT--C-TT----GT---------------TAT-TC----ACAT---A-----------tgaatatcaatatgcga
gi|16 : tgatt------TA----TA-TGC--GA--TA------A--ACC-T--TG----AT---T------------------------------------------C--TT-C----A-T-----T-----T---G----CA--T--TC----AA----T-A-------A-TCT---T-G-----T---T-ATCT-A--TAT-T-CA---A--T-AAT--A-TT----GT-----T--A-T--T-TA--TC----A-AC---------------------------T----A-----T-A---A--A-C-AT----T--
gi|13 : gttt------TG----TA-GTC--GA--TA------A---TC-T--TG----GTATTT-----A-TA-----------T-G-----CGA-----A--------TT-T----A-T-----T-----TTTCA----TA--T--TC----GACTAGT-A-------A-TCT---T-G-----A---A-ATAT-A--TTT-G-CC---A--A-A-T--T-TT----GA-----T--T-C--A-TAT-GC----G-AT---ACTAAA------A-----------T----A-----T-T---G--A-T-------T--T-AT-ATTCGG----TA-AC----CTT-CG-A-T----------A---TT-TTTG-TT-Aaaca
gi|3 : ----TA-TGC--GA--TA------A--A-G-T--TG----AT---T-----A-AA-----------ATG-----CGT-----AA-T-TC--TT-GTTATA-T-----A-----T---ACATGTA--T--TT----GA----T-A-------A-TCT---C-G-----C---T-ATTC-A--TAT-T-CG---A--T-CAT--C-TT----GT-----T--G-T--A-TA--TC----G-AT---ATCTTGATCATTA-----------T----G-----T-GCAAC--A-T-AT----T--C-AT-ATGCGA----T--AA----TCT-TG-A-T----------T---AT-tctatattcgataat
gi|8 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattatC--AA--TA------ATCATG-T---G----AC---CC----A-TA-----------T-G-----TGG-----AA-A-TC--TT-C----A-T-----T-----A---G----TA--T--TC----GA----T-A-------A-TTT---G-G-----T---T-ATTT-C--TTCAG-TA---A--A-AAT--C-TT----GT-----T--T-T--A-T-T-TC----G-AT---A-----------A-----------T----C-----T-T---T--A-T-AT----C--T-AT-GTGCGA-----A-AA----TCT-TG-A-TTTATTCATA-A---AC-TCCG-TG-AC------AG-T---GAAA-----T-TT--T-----T--------T-A-----C-TT----AT-TTT---TG--CGacattcaataaatcttgatttatatt
gi|5 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaacA--TA------A--ATC-T--TG----AT---TT----A-TA-----------T-G-----CAA-----AA-A-TC--TT-G----A-T-----T-----T---A----TA--T--TT----GA----T-A-------G-TTT---T-A-----TCAAT-ATTC-A--TAA-A-CG---A--A-AAT--C-AT----AA-----T--T-T--G-TAT-TC----A-AT---------------A-----------T----AAGC--T-T---G--A-T-AT----A--G-AC-ATGC-------A-AA----TTT-TG-A-------------------------------A---AA-T---TATA-----T-T---------------CGAC-A-A--TC-TC-A--ATGTCTATATA--TGTGA-A-A------A-TT-TTT----ATA-T----ATG------------TTTATATTC---AATA---A-TC---TTGATATA---TT----TCT--------AT---T----T-GA------T-------AT-C------A--TTTTGC--TATAT-ACTTGCAA-A-AA-TTTTG---ATTG-GT----------ATGTGA-T-AA---------------T--TA--A----ATG--C------------A-AT--A--A-TCATGAAG---A---TTG--CC---GAATATAA---ATA
gi|20 : aaataaaacactgtattattatA--TA------A--ATC-T--TG----AT---TT----A-TA-----------T-G-----AAA-----GA-A-TC--TT-G----A-T-----C-----T---A----TA--T--TC----AA----C-A-------A-TCG---T-A-----A---T-ATCT-A--TAT-G-Cacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|15 : ggcgtgtaaaacgttgcaatatcatA--TA------C--ATG-TCTTG----CT---TC----A-TA-----------T-G-----CGA-----AA-A-TC--TT-G----C-T-----T-----T---A----TA--T--TC----GA----T-A-------A-TTT---T-G-----A---T-ATTT-A----T-G-CA---A--A-AA
gi|2 : cactacttatattataatcaattttA------A--ACG-T--TGCAATAT---T-----A-TA-------------------CAA-----A---------T-G----A-T-----T-----T---A----TA--T--TC----CA----T-A-------A-TTT---G-G-----T---T-ATTC-A--TAT-C-CA---T--A-ACT--C-TT----GT-----T--T-T--A-TAT-TT----G-AT---A-----------A-----------T----C-----T-T---G--A-T-AT----C--A-AT-ATGCGA----AA-AG----T-T-TG-A-T----------gatattgtaacgtcttacaca
gi|5 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaa-T--TG----AT---T-----T-TA--------------------GA-----AA-A-TT--TTTG----A-T-----T-----T---A----TA--T--TT----GA----T-T-------A-TCT---T-G-----T---T-ATTT-A--TAT-T-CG---G--C-AAT--C-TTCATGAT-----TA-T-T--G-CAT-TT----A-AT---T-----------A-----------T----tacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|11 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtg---T-----A-TA-----------T-G-----CGA-----AA-A-TC--TT-G----A-T-----T-----T---T----TA--T--TC----GA----T-A-------T-TCT---T-G-----T---C-A-----------------------AAT--C-TT----CA-----A--T-C--A-TAT-TC----A-AT---A-----------A-----------T----tccaaatt
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatg-G-----CGA-----TA-A-TC--TT-G----A-T-----T-----T---A----TA--T--CC----AA----T-A-------A-TCT---T-G-----A---T-ATTT-C--TAT-G-CA---A--A-AAC--T-TT----GA-----T--T-T--A-TAT-TT----G-AT---A-----------A-----------C----C-----T-T---G--A-C-AT----T--C-AA-TTGC-A----TA-TT----CTT-TG-A-T---------------T-TGTA-GT--C--C---AT-T---TAAA-----TGTTGAT-----TGTAACCGAT-A-A--TC-TT-T--AT-ATT---c
gi|21 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgt-----CGA-----AA-A-TG--TT-G----A-T-----T-----T---A----TA--T--TC----GA----T-A-------A-TCT---T-G-----A---T-ATCT-A--TAT-G-TG---A--A-AA------------T-----T--T-T--A--AT-TC----A-Ac
gi|6 : tA-----AA-A-TC--TC-G----A-T-----T-----T---A----TA--T--TT----GA----TAA-------A-TCT-----------T---T-ATTT-A--TGT-T-CG---ATTA-ACT--T-TT----AT-----T--TCT--G-TA---C----G-ATA--A-----------A-----------T----C-----T-T---G--A-T-G--------C-AT-ATTCAA----CG-AA----TTT-TG-A-T----------GTACAT-TCA-----AT--A---AA-TC--TAAA-----T-CT--A-----TATT--CGAT-A-A--TC-TT-AGTAT-TCA---TG--TGCAA-A-A------C-GC-TTG----ATT-TATA-TTCAATAAACCTTGGTTT-----C---TATG-----TT---TTG----AATTTT----TAT--------AT---T----T-GA------TA------AA-T------C--TTT-----TTTAT-ATT--TAA-GAAA-TATTG---ATGT-AC----------ATTTTA-TAGCTC---TTG-------------------------------------ATAT--AT-A-CT-TGGCA---A-ACT-----C---TAATTTAT---ATgaaggctaaataaacaaa
gi|7 : -----AA-A-TC--TT-G----A-T-----TACCAGT---A----TA--T--TCATGGGA----A-A-------A-TCT---T-------T---T-ATTA-A--TGT-T-CG---A--T-AAT--C-TT----GTAA---T--C-T--A-TAT---------AC---A-----------T-----------T----C-----T-T---G--A-T-TT----T--C-AT-ATGCGA----AA-AA----TCT-GG-A-T------------------------------------T---TATA-----T-T---------------CAAT-A-A--TC-TT-GTTGT-TTA---TA--TGCAA-A-G------AGTT-TTG----GTT-T----ACA------------T--A----A---GATA---A-CCGTATTG----A---TTATA-TATGTGCG---AA---TAGTTT-GA------T-------AAAT------C--TTGTTA--TCTAT-ATG--CAA-A-AA-TGTTG---AGTT-AT----------ACTCCA-T-AATC---TTG-------T--TA--CTGAAATG--CGAA---------ATAT--AT-A-TT-CGACA---A-TCTTgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|18 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcact-A-TC--TT-A----A-T-----T-----T---A----TT--T--CC----GA----T-A-------A-TCT---C-T-----T---T-ATTC-A--TAT-G-CG---A--A-ACT--C-TT----GC-----T--T-T----TAT-Tgtttcatttttatttatatc
gi|17 : tggcgtgtaacacgttgtaatattctacgT-G----A-T-----T-----T---A----TA--T--GC----GA----T-A-------AATCT---T-G-----------GTTA-A--TAT-G-TA---AT-A-AAT--C-TT----GA-----T--T-T--G-TAT-TC----A-AT---A-----------A-----------T----T-----T-T---G--T-T-AT----C--T-AT-ATTCGA----T--AA----TCT-TG---T----------T---AT-TCagcga
gi|16 : -T-----T-----T---A----TA--T--GC----GA----T-A-------AACCT---T-GA----T---T-CTTC-A--TTT-G-CATTCA--ATAAT--C-TT----GT-----TATC-T--A-TAT-TC----A-AT---A-----------A-----------T----A-----T-T---G--T-T-AT----T--T-AT-CAACTA----TA-AA----CAT-TA-A-C----------A---acata
gi|13 : gt-----T---G----TA--G--TC----GA----T-A-------A-TCT---T-G-----G---T-ATTT-A--TAT-G-CG---A--A------T-TT----AT-----T--T-TTCA-TAT-TCGACTA-GT---A-----------A-----------T----C-----T-T---G--A-A-AT----A--T-AT-TTGC------CA-AA----TTT-TG-ATT----------C---ATATGCG-AT-ACTAA---AA-TA--TTGA-----T-TT--A-----TATT--CGGT-A-A--CC-TTCGATAT-TTT---TG--T
gi|14 : ---A----TA--T--T-----GA----T-A-------A-TCT---T-A-----T---T-ATTT-A--TAT-G-CATGCA--A-AAT--C-TT----AA-----T--T-C--A-TAT-TT----G-AT---A-----------A-------------------------------A-T-CC----TCAT-AC-ATATGG----TA-AA----TCT-TG-A-T----------GT--ATATTCG-AT--C--A---AT-T---TTGA-----T-tatctatattcgataat
gi|2 : -A-------A-TCT---T-G-----------ATTC-A--TAT-G-CG---A--A-AAT--C-TT----GA-----T--T-T--G-CAT-TC----G-AT---A-----------A-----------T----C-----T-T---G--A-T-GT----T--T-AT-ATGCGAATTTTT-TA----TGT----A-T----------A------TTCG-GT-A-----------------A-----T-CT--T-----GTTG--CAA--A-A--GA-TT-G--AT-TTT---------CGA-TAA------A-TC-TTG-------------TTA------------TTTA--------AATT---A-CA---T----------TC----TAT--------AA-----------------------------C------C--TTGCTA--TTTAT-ATG--CGA-A-AA-TTTAG-TTGTAT-AT----------AT--GA-C-AATC---GTGATGT---T--TA--T----ATG--C------------GAAC--AT-G-TT-T-ATGTGTA-T-TCG--ATTG-TGATGTAT---ATATTCCACAATCTTGTTTTTTTTTA----TGTGCGAACAT-------TTTGAT------TTA-T-----A-------------TACGGT--AAATTC--GATAA-TCTTGTAAT--TCAT---ATTCGATAAgtcaatattta
gi|20 : cgtgtaaaacggtgcaatattataca-A-------A-TCT---T-G-----------ATTT-A--TAT-G-AA---A--G-AAT--C-TT----GA-----T--C-T--A-TAT-TC----A-AC---A-----------A-----------T----C-----G-T---A--A-T-AT----C--T-AT-ATGCcttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|11 : ggcgtgtaaaacgttgcaatatcatata-TCT---T-G-----T---T-AATC-A--TAT-G-GG---A--A-AAT--A-TT----GT-----T--T-T--G-TAT-TC----G-AT---A-----------A-----------TC---A-----T-G---T----T-AT----C--T-AT-ATGC
gi|15 : agcaagattatcgaatggagat-TCT---T-G-----C---T---TC-A--TAT-G-CG---A--A-AAT--C-TT----GC-----T--T-T--A-TAT-TC----G-AT---A-----------A-----------T----T-----T-T---G--A-T-AT----T-----T-ATGCAA----AA-AAAAATTGA-TT-A-T----------A---AT-aaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatgtatatgcgaaaatcttgatttttattcgatattcttgtcaaatcttcaatcatattcaataatc
gi|21 : cactacttatT---T-G-----T---TTATTT-AGCCTT-C-CG---A--A-AAT--G-TT----GA-----T--T-T--A-TAT-TC----G-AT---A-----------A-----------T----C-----T-T---G--A-T-AT----C--T-AT-ATGTGA-----A-AA----T-T-T----T----------A---AT-TCcatgtatgatattgtaacgtcttacaca
gi|12 : tttC-A--TGT-G-CG---A--T-AAT--C-TT----GA-----T--T-T--A-TAT-CC----A-AT---A-----------A-----------T----C-----T-T---G--A-T-AT----T--T-CT-ATGCAA-----A-AA----CTT-TG-A-T------------------------------------T---TATA-----T-TT---------------GAT-A-A--CC-TT-G--AC-ATT---CAATTGC-A-T-A------T-TCTTTG----ATT-TGTAGTCCA-----------TTTA--------AATG----------TTG----A----T----TGT--------AA---C----C-GA------T-------AA-T------C--TTTATA--TTa
gi|7 : cttgcaaaacgttgcaatgttgtacaaacatcatcc-T--A-TAT-TC----A-CT---A-----------A----------------A-----TCGT--G--A-T-GTACCAG--T-AT-ATTCAC----TA-AA----TCT-TG-A-T----------T---A---CCA-GT-AT--ATT-CA-T---GGGAAAATCT-TT--TATTAATGTT--CGAT-A-A--TC-TT-GTAAT-CTA---TA--TAC-A-T----------TC-TTG----ATT-T----TCA------------TATG----C---GAAA---AATC---TGG----A---TT----TAT--------AT---T----C-AA------T-------AA-T------C--TTGTTG--TTTAT-ATG--CAAAG-AG-TTTTG---GTTT-AC----------ATAAGA-T-AACCGTATTGA------T--TA--T----ATA--T------------GTGCGAAT-AGTT-TGATA---AATCTTG-------T--TATCT---ATATGCAAAAATGTTGAG-----TTA----T------AC----------TCCAT-AA-TCTTGTT-----ACTGAAATGCGAAATA---T--ATATTC--GACAA-TCTTGTTc
gi|17 : tgatatacctg-AT----T--T-AT-ATGCGA----TA-AA----TCT-TG-G-T----------------------------------------TAA------------------TATG--TAAT-A-AA-TC-TT-G--AT-TTG---TA--TTCAA-T-A------A-TT-TTG------T-T----ATC------------TATATT--C---GATA---A-TC---TTG---------T----TAT--------tcatttttatttatatc
gi|3 : tg----T--T-ATTATGCGA----TA-AA-----GT-TG-A-TTAAAATGCGTA---AT-TCTT-GTTAT--A---TA-TACATGTA-----T-TT---------------GAT-A-A--TC-TC-GCTAT-TCA---TA--TTCGA-T-C------A-TC-TTG-------------TTG------------TATAT---C---GAT----A-TC---TTG----A---TC----------------A---T----T--A------T-------GT-G------C--AACATA--TTCAT-ATG--CGA-T-AA-TCTTGATTA--T-AC----------ATTCAA-TAAATC---TTGAT-----T--TA--T----ATtcacata
gi|6 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgta--A---AA-TC--TCGA-----T-TT--A-----TATT--TGAT-A-AA-TC-TT-T--AT-TTA---TG--TTCGA-T-T------A-AC-TT------TTAT----TTC------------TGTA----C---GATA---AATC---TTG----A---TG----CAT--------AT---T----C-AA------C-------GA--------A--TTTTGA--TGTAC-ATT--CAA-T-AAATCTAA---ATCT-AT----------ATTCGA-T-AATC---TTA-------G--TATTC----ATG--TGCAAAACGCTTGATTT--AT-A-TT-CAATA---A-ACCT--------TGGTTTCT---ATGTTTTGA-ATTTT-----------------------TATA------TTTGATAAA-TCTTTTT------------------------T--ATATTTAAGA-AA-TATTGATGT--ACAT---TTTt
gi|17 : aGA-----T-TT--A-----TATG--CGATAA-A--TC-TT-G--GT-TAA---TA--TGTAA-TAA------A-TC-TTG----ATT-T----GTA------------TT------C---AATA---A-TT---TTGTT--A---TC----TAT--------AT---T----C-GA------T-------AA-T------C--TTGTTA--TTCAC-ATatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|12 : t-----TGTG--CGAT-A-A--TC-TT-G--AT-TTA---TA--TCCAA-T-A------A-TC-TTG----ATA-T----TTC------------TATG----C---AAAA---A-CT---TTG----A---TT----TAT--------AT---T----T-GA------T-------AA-C------C----------TTGAC-ATT--CAA--------TTG------C-AT----------ATTCTT-T-GAT----TTG-------TAGTC--C----ATT--T------------AAAT--GT---------TG---A-TTGTA--ACCGATAATCTTT---ATATTCa
gi|11 : cttgcaaaacgttgcaatgttgtacaaacatcatccca-----TATG--CGAA-A-A--TC-TT-G--AT-TTT---TA--TTCGA-T-A------T-TC-TTG----
gi|17 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatgtaT-G--AT-TTA---TA--TGCGA-T-A------AATC-TTG----GTT-A----ATA------------TGTA---------ATA---AATC---TTG----A---TT----TGT--------AT---T----C-AA------T-------AA-T------T--TTGTTA--TCTAT-ATT--CGA-T-AA-TCTTG-TTATTC-AC----------ATtcaaatcttcaatcatattcaataatc
gi|17 : -T----TTA------------TATG----C---GATA---AATC---TTG----G---TTAATATGT--------AA---T----A-AA------T---------------------CTTGA--TTTGT-ATT--CAA-T-AA-TTTTG-TTATCT-AT----------ATTCGA-T-AATC---TTG-------T--TA--a
gi|16 : tgaAT--------AAACCT----T-GA------T--------------------TCTTCA--TTTGC-ATT--CAA-T-AA-TCTTG-TTATCT-AT----------ATTCAA-T-AATA---TTG-------T--TA--ttcacata
gi|5 : gttttatatgcgA---T----T-GA------T-------TT-TAGAAAAT--TTTTGA--TTTAT-ATT--TGA-T-TA-TCTTG-TTATTT-AT----------ATTCGG-C-AATC---TT---------------C----ATGATT------------AT-T--GC-A-TT-TAATT---A-TCACAT-AC---CAATtttatcaactataaacattaaca
gi|21 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgTTGA--TTTAT-ATT--CGA-T-AA-TCTTG-ATATCT-AT----------ATGTGA-A-AATT---TTccaaatt
gi|11 : tttgaatt--TTTGT-ATT--CGA-T-AA-TCATG-TTATCT-ATATGCATCTCCATTCGA-T-AATC---TTG-------C--Tcattttcggaaggctaaataaacaaa
gi|2 : TTAT-A----CAA----A-TCTTG---ATTC-AT----------ATGCGA-A-AATC---TTG-------------------------------------ATTT--GC-A-TT-CGATA---A-TCTTG--A-------TGTTT---ATATGCGAA--TTTT--------TTA----T------GTATA------TTCGGT-AA-TCTTGTTGCAAAA-------------GA---TTGATTTTC--GATAAATCTTGTTATTTAAATTACATTCTATAACCTTGCTATTTATATGCGAAAATTTAGTTGTATATATGACAATCGTGATGTTTATATGCGAACATGTTTATGTGTATTCGATTGTGATGTATATATTCCA----CAA-TCTTG-TTTTTTTT-TATG--TGC--GAACATT-TT-G--ATTTATAT---ACGG-T-A-----A--A----T-T--CGAT--A---AT----CTTG--T-AAT------T---------C--AT--A-------TTCG--A------T---acaatattttcccatatgattaacaagaaaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatgtatatgcgaaaatcttgatttttattcgatattcttgtcaaatcttcaatcatattcaataatc
gi|3 : cgtgtaaaacggtgcaataTG--T------------AT-T--ATTA-TG-CGATA---A-AGTTG--AT---TAAAATGC---GTAAT------TCTTG-------TTA----T------ATATACATGTATTTGAT-AA-TCTCGCT-----A-------------TT---C--ATATTC--GATCA-TCTTGTTGT--ATA------TCGATaacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|17 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattt------------ATTT--AT-A-TG-CGATA---AATCTTG--GT---TAATATGT---A-AT----AAATCTTG---------A----T------TTGTA------TTCAAT-AA-TTTTGTT-----A-------------TC---T--ATATTC--GATAA-TCTTGTTATTCACAT---Aatcttgatcattatgtgcaacatattcatatgcgataatcttgattatacattcaataaatcttgatttatatt
gi|14 : tg--AT-A-TT--GATA---A-TCTTATTAT---T--TATAT---GCATGC-AAAATCTTA---------A----T------TCATA------TTTGAT-AAATCCT--C-----A-------------TA---C--ATAT----GGTAAATCTTG--AT--GTAT---ATTCGAT
gi|5 : AAAATTTT--------TGA----T------TTATA------TTTGAT-TA-TCTTGTT-----A-------------TT---T--ATATTC--GGCAA-TCTTcaattttgatgtcaatattta
gi|2 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtgataattaaatgcaataatcatgT-------ATATTCGG----TAA-TCTTG-TTG--------------C--AAAAGAT-T--G--ATTT--------TCGAT-A-----AATC----T-T--GT-T--A----------TTT-A--AA-------T---------T--AC--A-------TTC----------T-------AT---AACCTTGCTATTTATATGCGA----AAAT---TTA--GT--TGT---ATAT---A----TGAC-AATC-G---T---G---------ATG-TTT----AT-A-TGCGAACATGT---TTATGTG-TATT-CGAT-----TG---TGATG-T--AT--AT---------ATTC--CA-C-AAT-CTTGTTT-TT----------TT--TTATG--TGCG-A---ACATTTTGATT--TAT---ATACGGTAAATT------CG-AT-AAT---------CTTGTA-AT-------TC----ATAT---------TCGATAAC-------TT-----AA-C--GCATTTA-A------AT-----CAAACTTT-TCGCAT--AT---TGATAT-CA---AGAT--------------------T---------------A---T----CAA---------A------------TATAA------A----AC-AAGAGTT-AT---GGAT---------------A------------TG--AA------TA-A------CCA---AA-TT-ATG--G--AATATA---------A--AT--C-Actaaaatcaatccaaatt
gi|6 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgT-------ATGTTCGA----TTA-ACTT--TTATTTCTGTA------C--GATAAATCTT-G--ATGCATATTCAACG----A-----A-TT----T-TGATG-T--A---CA----TTCA-AT-AAATCTAAAT---------CT-AT--A-------TTCG--A------T------------AATCTTAGTATTCATGTGCAA----AACGC--TTG--AT--T-T---ATAT---T----CAATAAACC-T---T---G-G-TTTC-TATGTTTT-G--A--A-TT---------------TTTA-TATT-TGAT-----AA----ATCT-T-T-TTTAT---------ATTTAAGA---AAT-ATT------G----------AT--GTACA--TTTT-A--TAGCTCTTGATA--TAT---ACTTGGCAAACT------C---T-AAT-------------------------TT----ATAT---------GC-G-ATC----GA-AT-----ATAC--ACCGGTA-A------AT-----CTAGATTTATCGAAtttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|4 : aaaatctcgatttatatttgataaatctttattT-------ATATTCGA-----AA-TCTTG-TTAT-TCCATAT---GC----GAAAATCTT-G--ATCTCTA----TTCGAT-A-----T-TT----T-T-------------------TT---T-AA-------T---------TTAAT--A-------TGCA----------------GA----GATTTTGAT--TCAAATGCGAT---AAATTCTTTG--AT--T-T---ATAT---T----TGATGATTT-T---G---A-A-TAAT-TATACTTT-G--AT-A-ATCT--T-TGT---T-ATTTATTTTT-CGAT-----AA---TCTTG-A-TATTAAT---------ATTC--AACT-AAC-Ccctacaaaagaattttcgcacaaaaaatc
gi|12 : tgtaaaacgttgcaatattacaacaagtcctttgatttataatgcggaaatctcggttttgtaattcggtaattggtttattttaaggcaaaaatcttgacttT-------ATATCCAA----TAA-TCTTG-ATATTTCTATG------C--AAAAACT-TT-G--ATTTATA----TTTGAT-A-----A-CC----T-TGACA-T--T---CA----ATTGCAT-AT-------T---------C--TTTGA-------TTTGTAG------T---C--CATTTAAATGTTGA---TTGTAACCGAT----AATC--------T--T-T---ATAT---T----gtgtgtctatttacatgtatattcaattgattttatattcgataccattaatttttgttaattttataattcgataaatttaatactcgataacctttgaatatcaatatgcga
gi|7 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgtgcgataatcttgattT-------ATATTCAC----TAAATCTTGATTACCAGTATAT---TCATGGGAAAAT-CT-----TTTAT----------T-A-----A-TG----T-T--CGAT--A---AT----CTTG--T-AA-------T---------CT-AT--A-------T--------------------AC---ATTCTTGATTTTCATATGCGAA---AAATC--TGG--AT--T-T---ATAT---T----CAAT-AATC-T---T---G-T-TGTT-TATA-TGCAA--AG-A-GTT---T-TGG---T-TTACA-TAA---GAT-----AACCGTATTGAT-TATATATGTGCGAATAGTTT--GA-TAAAT-CTT---G-TT----------AT--CTATA--TGCA-A---AAATGTTGAGT--TAT---ACTCCATAAc
gi|13 : tgatatacctgtatattcactaaatcgtgatgtaccag-------ATATTCGACTAGTAA-TCTTG---AAATATATTT---GCC----AAATT-TT-G--ATTCATAT---GC-GAT-A--------C----TAA--AA-T--A----------TTG-AT----------T---------T--AT--A-------TTCG--GTAACCTT---C--GAT---ATTTTTGTTATCTATATTCGAT---AAtcttgttactgaaatgcgaaatatatattcgacaatcttgtttcatttttatttatatc
gi|5 : tgtagtcgataatcttggtatttatatgcgaatttatttttcA-TCTTG---ATTTATATG------C--AAAAATC-TT-G--ATTTATA----TTTGAT-AGTTTTA-TCAATAT-T--CA-T--A---AA----C--G-AA-AA-------T---------C--AT--AATTTGTATTCA--A------T-------AT---AAGCTTGATATAGACATGC------AAATT--TTG--AAAAT-T---ATAT---T----CGAC-AATC-T---C---AAT-GTCTATATA-TGT-G--AA-AATTT---T-TATATAT-GTTTA-TATT-CAAT-----AA---TCTTGATATATTTCT---------ATTT--GA-T-ATC-ATT---T-TG----------CT--ATATA--CTTGCA--AAAATTTTGATTGGTATGTGATAAT-TAAAT------GCA-AT-AAT---------CATGAAGAT-------TGCCGAATAT---------AA-ATAACAA--GA-TA-----AT-C--AAATATA-A------AT-----CAAAAATTTTCTAAA--AT---CAATt
gi|3 : aaataaaacactgtattattatataa-TCTTG-TTATATATACATGTATTT--GATAATC-TC-GCTATTCATA----TTCGAT-C-----A-TC----T-TGTTG-T--ATATCGATATCTTG-AT-CA-------TTATGTGCAAC--AT--A-------TTCAT-A------TG--C--GAT---AATCTTGAT-TATACATTCAAT---AAATC--TTG--AT--T-T---ATAT---T----ccaaatt
gi|2 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaatATTTATAT---TCC--ATAA--T-TT-G--GTT-AT----------T-C-----A-TA----T-C--CA-T--AA--CT----CTTG-TT----------T---------T--AT--A-------TTTG--A------T------------AATCTTGATATCAATATGCGA----AAAGT--TTG--AT--T-T---AAATGCGT----TAA
gi|6 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacAAAAT-CTCG--ATTTATA----TTTGAT-A-----AATC----T-T------------------------T-AT-------T---------T--AT--G-------TTCG--A------T--------T---AACTTT--TATTTCTGTACGAT---AAATC--TTG--AT--G-C---ATAT---T----CAACGAATT-T---TG--A-T----G-TACA-TTC-A--AT-A-AAT---C-TA----A-ATCTA-TATT-CGAT-----AA---TCTTA-G-TATTCAT---------GTGC--AA---AACGCTT------G----------AT--TTATA--TTCA-A--TAAACCTTGGTT--TCT---ATGTTTTGAATT-----catttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|10 : T-TT-G--ATTTATA-----CG-AT-A---------------------T--A---TA----TATG-AT-AT-------T---------C--------------TTC-----------------------AATCTTGATGTTCATATGAGA----AAATC--TTG--AT--T-TA--ATAT---A----TAATtttatatttgataaatcttttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|17 : gacatgtgaaacgatttaatatcattT-G--ATTTATAT---GC-GATAA-----A-TC----T-T--GG-TTAA---TA----TGTA-ATAAA-------T---------C--TTG-A-------TTTGT-AT-----T---C--AAT---AATTTTGTTATCTATATTCGAT----AATC--TTGTTAT--T-C---ACAT---cgataatatggttattcatttaccaaaaaaaaaataataaataaataaattcgatgatcttgttacatgtattcatatgcgaaaatcttacagctgttcaatatattacatcttgattggtatgcga
gi|18 : T-A-----A-TA----T-T--C--T--A---CGAT--CTTA-AT----------T---------T--AT----------TTC--------------C--GAT---AATCTCTTTATTCATATGCGA----AACTC--TTG--CT--T-T----TAT---T----a
gi|15 : tggcgtgtaacacgttgC----T-T--CA-T--A---TG----C--G-AA-AA-------T---------C--TT--G-------CTTT--A------TATTC--GAT---AATTTTGATATT--TATGCAAA---AAAagcga
gi|12 : cactacttatattataatcaattt----CTTG-AT----------T---------T--AT--A-------TCCA--A------T------------AATCTTGATATTTCTATGCAA----AAACT--TTG--AT--T-T---ATAT---T----TGAT-AACC-T---TGACA-T-T------CA-ATT-GC-AT-A-TTC---T-T-T---G-ATTTG-TAGT-CCATTTA--AA---TGTTG----ATT-GT---------AACC--GA-T-AAT-CTT---caagacatgtatgatattgtaacgtcttacaca
gi|14 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgtgcgataat----CTTA-AT----------T---------C--AT--A-------TTTG--A------T-------A----AATCCTCATAC--ATATG--GT---AAATC--TTG--AT--G-T---ATAT---T----CGATCAATT-T---T---tatattc
gi|21 : atattgataatcttattatttatatgcatgcaaaatTTG-AT----------T---------T--AT--A-------TTCG--A------T------------AATCTTGATATCTATATGTGA----AAATT--TTA--AT--T-C---Agatgtcaatattta
gi|2 : ttTG-AT----------T---------T--AT--A-------TTC--------------C---AT---AATTTGGTTATTCATATCC-AT---AACTC--TTG--TT--T-T---ATAT---T----TGAT-AATC-T---T---cattttcggaaggctaaataaacaaa
gi|9 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcT-AA-------T---------T--AT--A---------CA--A------T---TTTGAT---AATCTTGCTATGTATATGCAA----AAATA--TTT--AT--T-T---ATAT---C----TGAAAAATC-T---tttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|8 : ttatggcgtgtaaaaagttgcagtgttgtacagatgttgatttatatgcaaaaatattcatctgtattcgataattttatcgtttatatgcgaaaacttcgataaagttatctatgtgccaaaatatttatttatacatcaataatatcgtgtgtaaaaggttgcaatattatataaatcattcgataatatttT--A-------TT-----------T---C--GAT---AATCTTTATATCTATGTGCGA----AAATC--TTG--AT--T-T---ATagatagatattcgaatacacaaatgattatagt
gi|14 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcattagtattcgataatttggttatttcttcagtaaaaatcttgttt--A------T---T--GAT---AATCTTATTATTTATATGC-ATGCAAAATC--TTA--AT--T-C---ATAT---T----TGATAAATC-------------CTCA-TACA-TAT-G--GTAA-ATC---T-TG------ATGTA-TATT-CGATC----AA---TTTTG-A-TGTCAAT---------ATTT--tcataaactccgtgacagtgaaattttttacttatttttgcg
gi|13 : at------T---C--GAT---AATCTTGGTATTTATATGCG------AATT--T----AT--T-TTTCATAT---TCGACTAGT-AATC-T---TGAAA--------TATA-TTT-GCCAA-A-TT----T-TG------ATTCA-T-ATGCGATACTAAAA---TATTG----ATTTAT---------ATTC--GG-T-AAC-CTT---C-GATATTTTTGTTAT--CTATA--TTCG-A--TAAa
gi|3 : tgtagATATTTATATGCAA----AAATT--TTG--AT--T-C---ATAT---T----CA---AATC-T---G---A-TATTCA-TATG-Tt
gi|17 : catgaaaactttgcaaactataacaaatATTTATATGCGAT---AAATC--TTG--GT--T-A---ATAT---G----TAATAAATC-T---T---G-----------A-TTT-G--------------------------TA-T--T-CAAT-----AA---TTTTG-T-TATCTAT---------ATTC--GA-T-AAT-CTT---gaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaattcttgttatatatacatgtatttgataatctcgctattcatattcgatcatcttgttgtatatcgatatcttgatcattatgtgcaacatattcatatgcgataatcttgattatacattcaataaatcttgatttatatt
gi|16 : tgTTTATATGCGAT---AAACC--TTG--AT---------------------------TC-T---TC--A-T----T-TGCA-TTC-A--AT-A-ATC---T-TGT---T-ATCTA-TATT-CAAT-----AA---TATTG-T-TATTTAT---------gttattcacata
gi|12 : gtATGTGCGAT---AA-TC--TTG--AT--T-T---ATAT---C----CAAT-AATC-TTGAT---A-T-TTC--TATG---C-A--AA-A-ACT---T-TG------ATTTA-TATT-TGAT-----AA---CCTTG-A-CATTCA----------ATTG--CA-T-ATT-CTT-----TG----------AT--TTGTA--GTCC-ATTTAAATGTTGATcaactataaacattaaca
gi|6 : cttgcaaaacgttgcaatgttgtacaaacatcatccc---AAATC--TCG--AT--T-T---ATAT---T----TGATAAATCTT---T---A-T----T-TATG-TTC-G--AT---TAA---C-TTT---T-ATTTC-TGTA-CGATA----AA---TCTTG----ATGCAT---------ATTC--AA-C-GA--ATT---T-TG----------AT--GTACA--TTCA-A--TAAATCTAAATC--TAT---Atgtaaccgataatctttatattc
gi|2 : aT-TATA-TTC-C--AT-A-ATT---T-GGT---T-ATTCA-T-AT-CCAT-----AAC--TCTTG-T-T--TTAT---------ATTT--GA-T-AAT-CTT---G-AT----------AT--CAATA--TGCG-A--AAAGT-TTGATT--TAA---ATGCGTTAAGTTATC--GAATATGAATT-----------ACA----------------AGAT-------------TATCGA--AT-TT-----AC-C--GTATATA-A------AT-----CAAAATGT-TCGCAC--ATAAAAAAAAA-CA---AGATTGT------G----GAA---T------------------------------------A------------TATACAT----C----AC-A-------ATC--GAAT-------A---C-----------------A--CA------TA---------AA---CA-TG-TTC--G--CATATA---------AACAT--C-ACGA--TTG----T--CATATATACAACT------A---AAT------TTTCGCATATAAA--T-AG---CAAGGTTATAGA-------ATGTAATTTAAATA-ACAAG-ATTTAT-------------------CG-------A----A---AA---------TCAATCT-----TT---TG--CA-ACAAGA--T-TAC---CGA-------AT----------------ttcgataatcttagtattcatgtgcaaaacgcttgatttatattcaataaaccttggtttctatgttttgaatttttatatttgataaatcttttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|14 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatTT-G--AT-A-ATC---T-TAT---T-ATTTA-T-AT-GCATGC---AA---AATCT-T-AATTCAT---------ATTT--GA-TAAAT-CCT---C-------------AT--ACATA--T--G-G--TAAATCTTGATG--TAT---Aatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|5 : ata-A-TTT---T-TG------ATTTA-TATT-TGAT-----TA---TCTTG-T-TATTTAT---------ATTC--GG-C-AAT-CTT---CATG----------ATTATTGCA--TT------TAA---TT-ATC---AC---ATACC---AAT-------CA-A--AATTT----TTGCAAGTATATAGCAAAATG----ATATCAAATAGAAAT-ATATCAA--GA-TT-----AT-T--GAATATA-AACATATAT-----AAAAATTT-TCACAT--AT-----ATAGACATTGAGATTGT------C----GAA---T---------------A---T------A---------A------------TTT---T----------C-AAAA-TT---------T-------G---C---A------------TGTCTA------TA-T------CAA---GC-TT-ATATTG--AATACA---------A--AT--T-A----------------------------------T---GAT------TTTCGTTTATGAA--T-ATTGATAAAACTATCAA-------ATATAA-------A-TCAAG-ATTT-TTG----C-----------ATA-------T----A---AA---------TCAA--G-----ATTTATA--TA-AT---A--A-TAC-A-ttcgatcaattttgatgtcaatattta
gi|6 : aaataaaacacT--TTGTAGGTTCG-A--TAAATCTAGATT--TAC----CGGTGTATATTCGATCGCATAT-AAATTAGAGTT---TGC------------C----AAGT---------AT-ATATCAA--GAGCT-----AT-A--AAATGTA-C------AT-----CAATATTTCTTAAAT--A----TAAAA---A---AGATT-------------------T---------------A---T----CAA---------A------------TATAAA-----A----AT----------TC--AAA--------A---C---A------------TA--GA------AA-C------CAA---GGTTT-ATT--G--AATATA---------A--AT--C-AAG-------------CG------------------------------TTTTGCACATGAA--T-AC---TAAGATTATCGA-------ATATAG-------A-TTTAG-ATTTATTGAATGT-----------ACATC-----A----A---AA---------T--T--C-----GT---TG---A-AT---A----TGC-ATCAA------------------------------GATT-TAT----CGT-AC----------AG-AAATtttctaaaatcaatccaaatt
gi|15 : aaaatctcgatttatatttgataaatctttatttatgttcgattaactttt-AATTT----TTTTTTGCATA---------------------------A--ATATCAA--AA-TT-----AT-C--GAATATA-A------AG-----CAAGATTT-TCGCAT--AT---GA--AG-CA---AGAagaattttcgcacaaaaaatc
gi|2 : cactacttatattataatc----ATAT---------AA-ACATCAC--GA-TT-----GT-C--ATATATACA------AC-----TAA-ATTT-TCGCAT--AT---AAATAG-CA---AGGTTAT------A----GAA---T---------------G---T------A---------A------------TTTAAAT----A----AC-AAGA-TTTATCGAAAAT-----------C---AATCT--------TT--TG------CA-A------CAA---GA-TT-ACC--G--AATATA---------C--AT--A-AAAA----A----TT-CGCAT-----------------------------------ATAAA--C-AT---CAAGATTATCGA-------ATGCAA-------A-TCAAG-ATTT-T------C-----------GCA-------T----ATG-AA---------TCAA--G-----ATTTGTA--TA-AT---A--T-TGC-A-Ccatgtatgatattgtaacgtcttacaca
gi|4 : cgtgtaaaacg----ATAT---------AA-A-ATCAATTGA-AT-----AT----ACATGTA-A------ATAGACACACGGTTAGTTGAAT--AT---TAATAT-CA---AGATTAT------C----GAA-----------------------------AA-----------------------ATAAAT----A----ACAAAGA-TT-ATC--AAA--------G---T---A------------TA--AT------TATT------CAA---AA-TC-ATC--A--AATATA---------A--AT--CAAAGAATTTA----T--CGCAT------TTGAA---TCAAAAT------CTCTGCATATTAAATT-AA---AAAAAATATCGA-------ATAGAG-------A-TCAAG-ATTT-T------C-----------GCA-------T----ATGGAA---------TAAgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|17 : tgtaaaacgttgcaatattacaacaagtcctttgatttataatgcggaaatctcggttttgtaattcggtaattggtttattttaaggcaaaaatcttgactttatattcgaaatcttg----ATAT---------AG-ATAACAA--AA-TT-----AT-T--GAATACA-A------AT-----CAAGATTTATTACAT--AT---TAAC---CA---AGATT-------------------T---------------A---T----CGC---------A------------TATAAAT----tcgataccattaatttttgttaattttataattcgataaatttaatactcgataacctttgaatatcaatatgcga
gi|14 : tg----ATAT---------AC-AT--CAA--GA-TTT----AC-C--ATATGTA---------T-----GAGGATTTATCAAAT--AT---GAAT---TA---AGATT-T------T----GCA---T---------------G---C----------------A------------TATAAAT----A----AT-AAGA-TT-ATC--AAtcgataatcttgttattcacata
gi|21 : ata----ATAT---------AG-ATATCAA--GA-TT-----AT-C--GAATATA-A------AT-----CAACATTT-TCGGAtcgatcaattttgatgtcaatattta
gi|20 : tttgaattaaaattttcacAT---------AT-AGATCAA--GA-TT-----CT-T--TCATATA-A------AT-----CAAGATTTATATGAT--AT---Taggctaaataaacaaa
gi|13 : ggcgtgtaaaacgttgcAT---------AT-AAATCAA--TA-TTTTAGTAT-C--GCATATG-A------AT-----CAAAATTTGGCAAAT--AT-----ATTT-CA---AGATTAC------TAGTCGAA---T---------------A---T----GAA---------AAATAAATTCGCATATAAAT----A----CC-AAGA-TT-ATC--GACT-------A---C---A------------tcaacaatcgtaatatctatatgc
gi|12 : -ATGTCAA--GG-TT-----AT-C--AAATATA-A------AT-----CAAAGTTT-TTGCAT--AG---AAATAT-CA---AGATTAT------T----GGA---T---------------A---T-----AA---------A------------T----------------C-AAGA-TT-ATC--tcggtaaccttcgatatttttgttatctatattcgataat
gi|12 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgtgc-ATATAAA--GA-TT-----AT-C--GGTTACA-A-------T-----CAACATTTA---AATGGAC---TA-----CA---A-ATCAA------A----GAA---T---------------A---T----GCA---------A------------T-TGAAT----G----TC-AAGG-TT-ATC--AAAT-------A---T---AAATCAAAGTTTTTG--CA------TA-GAAATATCAA---GA-TT-ATT--G--GATATA---------A--AT--C-AAGA--TTA----T--CGCAtcaattgcatattctttgatttgtagtccatttaaatgttgattgtaaccgataatctttatattc
gi|7 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgCAA--GA-TT-----GT-CGAATATATA---------------------TT-TCGCAT--TT---CAGTAA-CA---AGATTAT------G----GAG---T---------------A---TAACTCAACATTTTTGCA------------TATAGAT----A----AC-AAGA-TTTATC--AAACTATTCGCA---C---A------------TA--TA------TA-AT-----CAATACGG-TT-ATC--T--TATGTA---------A--AC--C-AAAA--C----------------------------------T------CTTTGCATATAAA--C-AA---CAAGATTATTGA-------ATATAA-------ATCCAGA-TTTT-T------C-----------GCATATG---A----A---AA---------TCAA--G-----AA---TG--TATATAG-A--T-TAC-A-AGA-------TT----------------A--TCGA-A-CAT----TAA-TA----------AA-AGATTTTtc
gi|17 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcactaaatcttgattaccagtatattcatgggTATGTG-A------ATAA---CAAGATT-ATCGAAT--AT---AGATAA-CA---AAATTAT------T----GAA---T---------------A--------CAA---------A------------T----------------C-AAGATTT-AT------T-------A---C---A------------TA--T-------TA-AC-----CAA---GATTT-ATC--G--CATATA---------A--AT--C-Atttcatttttatttatatc
gi|3 : ATATA-A------AT-----CAAGATTTATTGAAT--GTA--TAAT---CA---AGATTATCGCATAT----GAA---TATGTTGCACATAATGA---T----CAAG--------A------------TATCGATATACA----AC-AAGA-TG-ATC--GAAT---------------A------------TG--AA------TA-G------CGA---GA-TT-ATC--A--AATACATGTATATATA--A---C-AAGA----A----TTACGCAT------TT------T---AAT------
gi|8 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgATA-A------AT-----CAAGATTT-TCGCAC--AT---AGATAT-AA---AGATTAT------C----GAA------------------------------------------------------ATAAA----------AC-AAGA-TT-TT------T-------A---CTGAA------------GA--AA------TA-A------CCA---AA-TT-ATC--G--AATACT---------A--AT--G-AAGA--TTT----C--CACAT-----------------------------------ATGGG--T-CA---CATGATTATTGG-------TTAGAA-------A-CCAAG-t
gi|13 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttTTATCGAAT--AT---AGATAA-CA---AAAATAT------C----GAAGGTT---------------A---C----CGA---------A------------TATAAAT----------C-AATA-TT-TT----AGT-------ATCGC---A------------TA--TG------AA-T------CAA---AA-TT--TG--GCAAATATA---------T--TT--C-AAGA--TTACTAGT--CGAAT------ATGAAAAAT---AA-------ATTCGCATATAAA--T-AC---CAAGATTATCGA-------CTAtcataaactccgtgacagtgaaattttttacttatttttgcg
gi|12 : tgAATAT-AA---AGATTAT------C----GGT---T---------------ACAAT----CAAC--------A------------TTTAAAT----GGACTAC-AA------ATC--AAAG-------AA--T---A------------TG--CAATTGAATG-T------CAA---GG-TT-ATC--A--AATATA---------A--AT--C-AA-------------------------------------AGT------TTTTGCATAGAAA--T-AT---CAAGATTATTGG-------ATATAA-------A-TCAAG-ATTA-T------C-----------GCA-------t
gi|11 : cttgcaaaacgttgcaatgttgtacaaacatcatcccatgAG-CA---AGATTAT------C----GAA---TGGAG-----------A---TG---CA-----------------------TATAGAT----A----AC-ATGA-TT-ATC--GAAT-------A---C---A------------c
gi|16 : ATAAAT----A----AC-AATA-TT-ATT--GAAT-------A--------------------TA--GA------TA-A------CAA---GA-TT-ATT--G--AATGCA---------A--AT--G-AAGA--aaacaatattttcccatatgattaacaagaaaacggcgtgtaaaatgtcgcaatattatataataattatatcctcatgtatatgcgaaaatcttgatttttattcgatattcttgtcaaatcttcaatcatattcaataatc
gi|21 : gttttatatgcgataaaccttgat-AAAA-TT-TTC--ACAT-------A--------------------TA--GA------TA-T------CAA---GA-TT-ATC--G--AATATA---------A--AT--C-AACA--Tcaactataaacattaaca
gi|3 : tttgaatt---A------------TA--TA------AA-T------CAA---GA-TTTATT--G--AATGTAT--------A--AT--C-AAGA--TTA----T--CGCAT------AT------G---AATA-----TGTTGCACAT-AA--TGAT---CAAGA-TATCG--------ATATAC-------A-ACAAG-ATGA-T-------------------CG-------A----A---TA---------TGAA---------T---AG--CG-AG---A--T-TAT---CAA-------ATA---------------C--ATG----TATA---TATAAC----------AA-GAA--TTACGCA-TTT-T-AATCAAtttcggaaggctaaataaacaaa
gi|11 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagA-G------CAA---GA-TT-ATC--G--AATG--------------------GAGA--TG----------CAT-----------------------------------ATAGA--T-AA---CATGATTATCGA-------ATACAA-------A-ACAAT-ATTT-T------CCCATATGATTAACA-------A----G---AAAACGGCGTGTAAAA-T-----GT---CG--CA-AT---A--T-TAT-A-TAATAATTATAT----------------C--CTCA-TGTAT-----AT-GC----------GA-AAATCTTG---A-TTTTT-ATTCGATATTCTt
gi|17 : ATGTG---------A--ATAAC-AAGA--TTA----T--CG---------------------AAT--------------ATAGA--T-AA---CAAAATTATTGA-------ATACAA-------A-TCAAG-ATTTAT------T-----------ACA-------tgtcaaatcttcaatcatattcaataatc
gi|15 : tgatttatatgcgataaatcttggttaataA--TAA----T--CA-AT------TT------T-----T------TTTTGC--ATAAA--T-AT---CAAAATTATCGA-------ATATAA-------A-GCAAG-ATTT-T------C-----------GCA-------a
gi|2 : cactacttatatt--CGCAT------TT------A---AATCAAACTTTTCGCATATTGA--T-AT---CAAGATTATCAA-------ATATAA-------A-ACAAGAGTTtatgaagcaagacatgtatgatattgtaacgtcttacaca
gi|3 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaa---AAT------TTTCACATATGAA--T-AT---CA-GATT--TGA-------ATATGA-------A-TCAAA-ATTT-TTG----C-----------ATA-------T----A---AA---------TATA--T------T---TG--TT-AT---AGTT-TGC-A--AA-------GT----------------T--TTCA-T-atggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|21 : c---AAT------TTTCACATATAGA--T-AT---CAAGATTATCGA-------ATATAA-------A-TCAAC-ATTT-T------C-----------GGA-------AGGCTA---AA---------TAAA--C-----ttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaattcttgttatatatacatgtatttgataatctcgctattcatattcgatcatcttgttgtatatcgatatcttgatcattatgtgcaacatattcatatgcgataatcttgattatacattcaataaatcttgatttatatt
gi|2 : tttgaattaaATGAA--T-TA---CAAGATTATCGATTTCGGTATATAA-------A-TCAAA-ATGT-T------C-----------GCACCAGTTTA----A---AA---------AAAA--CAGATTGT---TG--GA-AT---A--TATAC-ATCAA-------AT----------------C--aaa
gi|5 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaat----A---AA---------TAAAA-C-----AC---TG--TA-TT---A--T-TAT-A-TAA-------AT----------------C--TTGA-T-TTA----TAT-GC----------AA-AAATCTTG---A-TTTAT-ATTTGATAGTTTgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|17 : A---------TAAA--T-----CT---TGGTTA-AT---A--TGTA--A-TAA-------AT----------------C--TTGA-T-TTG----TAT-TC----------AA-TAATTTTGTT-A-TCTAT-ATTCGATAATCTtatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtgataattaaatgcaataatcatgaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|7 : tgatttatatgcgA---------TAAT--C------T---TG--TA-AT---C--TATAT-A-CAT--------T----------------C--TTGA-T-TTTCA--TAT-GCG---------AA-AAATCTGG---A-TTTAT-ATTCAATAATCTtgttattcacata
gi|2 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcactaaatcttgattaccagtatattcatgggaaaatcttttattaatgttcgAAA--C-----GG---TG--CA-AT---A--T-TAT-A-CAA-------AT----------------C--TTGA-T-TCA----TAT-GC----------GA-AAATCTTG---A-TTTGC-ATTCGATAATCTtgttgtttatatgcaaagagttttggtttacataagataaccgtattgattatatatgtgcgaatagtttgataaatcttgttatctatatgcaaaaatgttgagttatactccataatcttgttactgaaatgcgaaatatatattcgacaatcttgtttcatttttatttatatc
gi|2 : cgtgtaAAA--C-----GT---TG--CA-AT---A--T-TAT-A-CAA-------ATGATTTATATTCCATAAT--TTGG-T-TATTCA-TAT-CC----------AT-AACTCTTG---T-TTTAT-ATTTGATAATCTtgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|4 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaAAA--C-----GT---TG--CA-AT---A--T-TACAA-CAA-------GT----------------CCTTTGATT-TAT----AAT-GC----------GG-AAATCTCG---GTTTTGTAATTCGGTAATtacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|12 : tgtaAAA--C-----GT---TG--CA-AT---G--T-TGT-A-CAA-------AC----------------------A-T-CATCCCATGT-GC----------GA-TAATCTTG---A-TTTAT-ATCCAATAATCTtggtttattttaaggcaaaaatcttgactttatattcgaaatcttgttattccatatgcgaaaatcttgatctctattcgatattttttttaatttaatatgcagagattttgattcaaatgcgataaattctttgatttatatttgatgattttgaataattatactttgataatctttgttatttatttttcgataatcttgatattaatattcaactaaccgtgtgtctatttacatgtatattcaattgattttatattcgataccattaatttttgttaattttataattcgataaatttaatactcgataacctttgaatatcaatatgcga
gi|9 : cttgcaAAA--A-----GT---TG--CA-GT---G--T-TGT-A-CAG-------AT----------------G--TTGA-T-TTA----TAT-GC----------AA-AAATATTC---A-TCTGT-ATTCGATAATTTtgatatttctatgcaaaaactttgatttatatttgataaccttgacattcaattgcatattctttgatttgtagtccatttaaatgttgattgtaaccgataatctttatattc
gi|8 : ttatggcgtgtaAAA--T-----GA---TG--CA-AT---G--T-TAC-A-CAA-------AT----------------C--TTGA-T-TTA----TAT-GCAAAAAAAAATAA-AAATCTTG---A-TCTGT-ATTtatcgtttatatgcgaaaacttcgataaagttatctatgtgccaaaatatttatttatacatcaataatatcgtgtgtaaaaggttgcaatattatataaatcattcgataatattttaattatacaattttgataatcttgctatgtatatgcaaaaatatttatttatatctgaaaaatctagatagatattcgaatacacaaatgattatagt
gi|20 : gggtacatgacgtgtaAAA--C-----GT---TG--CA-AT---A--T-CAT-A-TAA-------AT----------------C--TTGA-T-TTA----TAT-GA----------AA-GAATCTTG---A-TCTAT-ATTCAACAATCttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcattagtattcgataatttggttatttcttcagtaaaaatcttgttttatttcgataatctttatatctatgtgcgaaaatcttgatttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|15 : ggcgtgtaAGA--C-----GT---TA--CA-AT---A--T-CAT-A-CAT-------GT----------------C--TTGC-T-TCA----TAT-GC----------GA-AAATCTTG---C-TTTAT-ATTCGATAATTTgtaatatctatatgc
gi|3 : cactacttatattataatcaatttttttttgcataaatatcaAAA--C-----TT---TG--CA-A----A--C-TAT-AACAA-------AT----------------A--T--A-T-TTA----TAT-GC----------AA-AAATTTTG---A-TTCAT-ATTCA--AATCTtacaca
gi|6 : catga---TG--CA--T---A--T-TCA-A-CGA-------AT----------------T--TTGA-TGTAC-----AT-TC----------AATAAATCTAA---A-TCTAT-ATTCGATAATCTgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaattcttgttatatatacatgtatttgataatctcgctattcatattcgatcatcttgttgtatatcgatatcttgatcattatgtgcaacatattcatatgcgataatcttgattatacattcaataaatcttgatttatatt
gi|17 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttatttctgtacgataaatcttga-A-TAA-------AT----------------C--TTGG-T-TAA----TAT-GT----------AATAAATCTTG---A-TTTGT-ATTCAATAATTTtagtattcatgtgcaaaacgcttgatttatattcaataaaccttggtttctatgttttgaatttttatatttgataaatcttttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222222222222222 1111111111 111111111 111111111 1111 11111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111 1111111 111111 111111 111 1111 555555555555555555555555555555555555 11 222222 1 222 555555555555555555555 111111 1111111 11 1111 0000000000000000000000000000000 22222222 1 2222 1111111 11111 777777777777777777777777777777 2222 1 11 222222222 22222 333333333333333333333333 1 11 1 111 5555555555555 111 2 111 1 1111 44444444444 1 222 3333333 22 2222 22222222222222222 22 11111111 22222222 1 2222222222 11 444444444444444444444444444444444444444444444444444444444 22222222 111 333333333333333 4444444 22222222 1111 11 11 66666666666666666666666666666 11111 111111 9999999999999999999999999999999999999999999999 11 11 1 44444444444 1
lowQualScore : 4 2 2 2 1111111111111111 8888 8888 2 2 444 2 2 0000000000 4 2 2 2 2 4 111111111 2 33 33 444444444 2 22 1111 0 22222222 3 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 4 1 55 3333333 2222222 4 4 66 222222 1 66 4 4 222222 1 333 0 6666 5 4 333333333333333333333333333333333333 44 111111 1 999 3 111 4 1 1 444444444444444444444 8 1 999999 0 9999999 8 0 0 33 5 0 2222 0 0 9999999999999999999999999999999 1 88 6 44444444 3 0 1 2222 1111111 33333 77 99 6 111111111111111111111111111111 0000 3 11 55 666666666 00000 2 3 5 555555555555555555555555 0 5 33 0 666 5 2222222222222 777 4 3 2 1 1 777 0 2 3 1 6666 3 00000000000 5 111 1111111 00 8888 4 3 3 22222222222222222 88 22 8 1 88888888 6 1 44444444 5 4 4 0 5555555555 3 3 0 33 111111111111111111111111111111111111111111111111111111111 22 8 77777777 111 3 5 5 1 000000000000000 0 9999999 3 3 5 11 55555555 0 1111 1 1 11 1 0 11 88 33333333333333333333333333333 99 4 1 66666 111111 1 7777777777777777777777777777777777777777777777 2 11 3 33 0 00000000000 22 0 0 1 4 4
lowQualScore : . . . . ................ .... .... . . ... . . .......... . . . . . . ......... . .. .. ......... . .. .... . ........ . ....................................................................................................................... . . .. ....... ....... . . .. ...... . .. . . ...... . ... . .... . . .................................... .. ...... . ... . ... . . . ..................... . . ...... . ....... . . . .. . . .... . . ............................... . .. . ........ . . . .... ....... ..... .. .. . .............................. .... . .. .. ......... ..... . . . ........................ . . .. . ... . ............. ... . . . . . ... . . . . .... . ........... . ... ....... .. .... . . . ................. .. .. . . ........ . . ........ . . . . .......... . . . .. ......................................................... .. . ........ ... . . . . ............... . ....... . . . .. ........ . .... . . .. . . .. .. ............................. .. . . ..... ...... . .............................................. . .. . .. . ........... .. . . . . .
lowQualScore : 6 7 5 5 2222222222222222 8888 8888 5 5 111 4 4 3333333333 7 4 4 4 4 7 888888888 2 44 77 111111111 7 77 3333 2 44444444 3 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 4 55 0000000 8888888 0 4 11 888888 0 11 4 4 888888 0 666 4 3333 6 3 555555555555555555555555555555555555 22 222222 0 555 3 777 0 0 0 888888888888888888888 0 0 222222 8 6666666 0 8 7 44 7 1 1111 1 1 1111111111111111111111111111111 7 33 7 77777777 0 9 0 4444 1111111 11111 99 22 7 777777777777777777777777777777 8888 3 00 88 888888888 00000 5 2 8 888888888888888888888888 0 8 88 0 555 8 5555555555555 555 2 2 0 0 0 555 0 5 0 0 0000 2 00000000000 5 000 9999999 77 3333 7 8 8 66666666666666666 55 00 0 4 22222222 8 0 22222222 7 2 0 0 2222222222 2 2 2 88 222222222222222222222222222222222222222222222222222222222 00 0 00000000 888 2 6 6 0 000000000000000 8 0000000 2 8 6 66 66666666 8 4444 0 0 88 4 6 00 88 55555555555555555555555555555 22 2 0 77777 555555 0 7777777777777777777777777777777777777777777777 5 22 2 88 0 22222222222 00 0 2 2 0 0
consensus : CATGGCGTGTAAAACGTTG-CAATA-TT-ATA-CAA------------ATC----TTG----AT-TTAT-ATGCG---A-AA-A----------TCT-TGA-TTTA-T-ATTCGAT-AA-TCTT--G--T---TATTCATATGC--GA--AAATCTTG--------A-TTT-ATAT----TCGA-------TAATNTNAN--TATT-TA--TAC-------A-----------GTGTATG---------------CGATAA--A-TNTTG----A-T-T-ATATT-------CGAT--AA-ATCTTG--AT-----T-TATA--TTCGATA-------ATCT---TGN-TA-TTCATATGCGA-AAAT--CTT------GNTTTA--TATTCG-AT-A------ATCTTG--ATATTTATATGCGATA-AATNTTGATA-AT-TCTGGTACAAA-T-TNGA-TT-TTATGC----GATAAT-TTGAT-TT-ATATNCGA-TAA-TCTTGATTTTTATTTA----C--G---ACGATC--T-TGA-TTTATATTCGA------TAATCTTN-TTA--TTTAT-ATTCGATAATCTTGTTATTC-ATATTCGA----TAATCTTG---------TG----ATATC-----------ATATTCGATA-A-TCTTGATTA--ATATATATATNC-G--AAATCTTGTTATG----TATATT--CG-GTAA-TCTT----------G-TT-------AT---AT--ATATTC----GATAA-TC--TTGTTAT--ANAT---ATT-----CNATAACCTTGCTATTTATATGCGAAAATT-TAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TNCGAANATTTTGATTTATA-NNNGATAACCTTCGATAATCTTGATAATT-CATATTCGA-----TCGATAA-TCTT----GNTATTTATATGCGATAAATCTTGATT--TATATTTAAT-AA-TCTTGNT-CTTATATT-CGATANTCTTG--TTATCTATATTCGATAATNTTGTT--------ATTTA-TATTCGANAAT-CTTTCGATC-T--ATATTCGATAAATCTTG--ATTTATACGCCGTA-ATT-----GCATATAATTT---TT--CTGC-----A-ATTTATGTATATATCAAGA-TTATCGN-------ATATAA--ATCAAGATTTATCGAA------TATAAATAACAAGATTNTTG-ATATCGAATATAAATAACAAAAT--TATCGAATACATACATANCAAGA-TTATCGAAT--ATAAA-TCA-A-GA-TTATC-GTA--TNA---------ATTTTCGC--ATATAGATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACA-CAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
Reference ( family-142 ) : CATGACGTGTAAAACGTTG-CAATA-TT-ATA-CAA------------ATC----TTG----AT-TTAT-ATGCG---A-AA-A----------TCT-TGA-TTTA-T-ATTCGAT-AA-TCTT--G--T---TATTCATATGC--GA--AAATCTTG--------A-TTT-ATAT----TCGA-------TAATNTNAA--TATT-TA--TAC-------A-----------GTGTATG---------------CGATAA--A-TNTTG----A-T-T-ATATG-------CGA---AA-ATCTTG--AT-----T-TATA--TTCGATA-------ATCT---TGT-TA-TTCATATGCGA-AAAT--CTT------GNTTTA--TATTCG-AT-A------ATNTTG--ATATTTATATGCGATA-AATCTTGATA-AT-TCCGGTACAAA-T-TNGA-TT-TTATGC----GATAATCTTGAT-TT-NTATNCGA-TAA-TCTTGATTTTTNTNTA----C--G---ATAATC--T-TGA-TTTATANTCGA------TAATCTTT-TTA--TTTAT-ATTCGATAATCTTGTTATTT-ATATTCGA----TAATCTTG----TTACATG---TATAT------------ATATTCGATA-A-TCTTGACTA--ATATNTATATNC-A--AAATCTTGTTATN----TATATT--CG-ATAA-TCTT----------G-TT-------AT---AT--ATATTC----GATAA-TC--TTGTTAT--ACAT---ATT-----CGATAACCTTGCTATTTATATGCGAAAATT-TAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGATAATCTTGTTATNTNTA---TAT-TCCGAAAANTTTGATTTATA-NCCGATAATCTTCG-TACGCTTGATAA-T-CATATTCGA-----TCGATAA-TCTT----GATATTTATATGCGATAAATCTTGATT--TATATTCGAT-AA-TCTTATT--TTATATT-CGATANTCTTG--TTATTTATATTCGATAATNTTGTT--------ATTTA-TATTCGATAAT-CTTCTGATN-T--ATATTCGATAAATCTTG--ATTTATACGCNGTAAATT-----GCA-ATAATTT---TT--CTGC-----A-ATTNATATANATATCAAGA-TTATCGN-------ATATAA--ATCAAGATTTATCGNA------TATNAATANCAAGATTATCGAATATCAAATATAAATAACAAGAT--TATCGAATACATANATANCAAGA-TTATCGAAT--ATAAA-TCA-A-GA-TTATC-GCA--TTA---------ATTTTCGC--ATATAAATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACA-CAA-------ATCTTGATTNNT-ATGCAAAAATCTTGATTTATATTCGATAATCT
gi|1 : CATG-TATGTAAAATGTTG-CAATA-TT-AAA-CGA------------ATC----TTG----AT-TTAT-ATGCG---A-AA-A----------TCT-TTA-TTTA-T-ATTTGAT-AA-ACTT--G--T---TATTCATTTGC--GA--AAATCTTG--------A-TTC-ATAT----TCAA-------TAATATGAA--TATT-TA--TAC-------A-----------GTGTATG---------------CGATAA--A-TGTTG----A-T-T-ATAAG-------CGA---AA-ATCTTG--AT-----T-TATA--TTTGATA-------ATCT---TGT-TA-TTCATTTGCAA-AAAT--CTT------GTTTTA--TATTCA-AT-A------ATATGG--ATATTTATATGCGATA-AATGTTGATA-AT-TCCGGTACAAA-T-TAGATTT-TTGTGC----GATAATCTTGAT-TT-TTGTGCGA-TGA-TCTTGATTTTTCTTTA----C--G---ATGATC--T-TGA-TTTATAATTGA------TGTTCTTT-TTA--TTTAT-ATTCAATAATCTTGTTATCT-ATATTCGA----TGATCTTG----TTACATG---TATAT------------ATATTTGATG-A-TCTTAACTA--ATATATATATTCTA--AGATCTTGTTATA----CATATT--TG-ATGA-TCTT----------A-TT-------AT---AT--ATATTC----GATGA-TC--TTGTTAT--ACAT---ATT-----CGATGANNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNN-NN-NNNNNN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAAAATTTGATTTATA-ACGGATAATCTTCG-TACGCTTGATAA-T-CATATTCGA-----TCGATAA-TCTT----GATATTTATATGCGATAAATCTTGATT--TATATTTAATGAA-TCTTATTTCTTATGTT-TGATATTCCTG--TTATTTATGATCGATAATATTGTT--------ATTCA-TATTTGATAAC-CTTCCAATC-T--GTATTCGATAAATGTTG--ATCTATACACTGTAAATT-----GCATATAATTT---TTTCCTGC-----ATACTTATATACATATCAAGA-TTATCAT-------ATATAA--ATCAAGATTTATCGAA------TATTAATAGCAAGATTATTGAATATCAAATATAAATAACAAGAT--TATCAAATACATACATAGCAAGA-TTATGGAAT--GCAAA-TCA-A-GA-TGATC-GCATTTTA---------ATTTTTGC--TCATGAATATCAAGATTATTG-----AATATGA--AC--CAAGGTTT-TCA---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACA-CAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATT-TAATA-TC-AT------------------TT----TTG----AT-TTAT-A--CG---A-TATA----------TATATGA-T------ATTCTTC-AA-TCTT--G--A---TGTTCATATGA--GA--AAATCTTG--------A-TTTAATATATAATCGA-------TAATATGGT--TATT-CATTTACCAAAAAAA-----------AAATA-------------------ATAA--A-TA-------A-A-T-AAATT-------CGA---TG-ATCTTG---------T-TACA--T--G---------------------TA-TTCATATGCGA-AAAT--CTT------AC---AGCTGTTCA-AT-ATATTACATCTTG----ATTGGTATGCGA
gi|11 : CA-A-GA-TTATC-GAA--TGG---------AGAT--GC--ATATAGATAACATGATTATCG-----AATACAA--AA--CAATATTT-TCC---------CATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATA-TAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCG-CAATA-TT-ATA-TAATAATTAT-----ATC----CTC----AT-GTAT-ATGCG---A-AA-A----------TCT-TGA-TTTT-T-ATTCGAT-AT-TCTT--G--T---C----------------AAATCTTC--------A-ATC-ATAT----TCAA-------TAATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTG-CAATG-TT-GTA-CAA------------A-C----ATC----ATCCCAT-GTGCG---A-TA-A----------TCT-TGA-TTTA-T-ATCCAAT-AA-TCTT--G--A---TATTTCTATGC--AA--AAACTTTG--------A-TTT-ATAT----TTGA-------TAACCTTGA--CATT-------C-------A-----------AT---TG---------------C-ATAT--T-CTTTG----ATT-T-GTAGT-------CCATTTAA-ATGTTG--A------T-TGTA--ACCGATA-------ATCT---TTA-TA-TTCc
gi|13 : ctTGTAGTCGA------TAATCTTG-GTA--TTTAT-ATGCGA--AT-TTATTTTTC-ATATTCGACTAGTAATCTTG---------------AAAT------------ATATTTGCCA-AATTTTGATTC--ATATGCG-ATACTA--AAATATTG--ATT----TATATT--CG-GTAA-CCTTCGATATTTTTG-TT-------AT---CT--ATATTC----GATAA-T
gi|14 : ATA-TTGATA----------------ATC----TTATT--AT-TTAT-ATGCATGCA-AA-A----------TCT-TAA-TTCA-T-ATTTGATAAA-TCC------T---CATACATATG---GT--AAATCTTG--------A-TGT-ATAT----TCGATCAATTTTGATGTCAA--TATT-TA--
gi|15 : GTGTAAGACGTTA-CAATA-TC-ATA-CAT------------GTC----TTG----CT-TCAT-ATGCG---A-AA-A----------TCT-TGC-TTTA-T-ATTCGAT-AA-TTTT--G--A---TATT--TATGCAAAA--AAAAATTG--------A-TT-------------A-------TAATATAAG--TA
gi|16 : cacTTTATATGCGATAAACCTTGAT-----------------TCTTCAT--TTGCATT-CAATAATCTTG--TTATCTATATTCAATAATATTGTT--------ATTTA-Ta
gi|17 : gtATTTATATGCGATAAATCTTGGTT--AATATGTAAT-AAATCTTGAT--TTGTATT-CAATAATTTTG--TTATCTATATTCGATAATCTTGTT--------ATTCA-CATcaactataaacattaaca
gi|18 : tgTGGCGTGTAACACGTTG-TAATA-TT-CTA-C-----------------------------------------------G-A----------TCT-TAA-TTTA-T-TTCCGAT-AA-TCTC--T--T---TATTCATATGC--GA--AACTCTTG--------C-TTT--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTG-CAACAATC-CTA-CCA------------ATT----TTG----AT-TTAC-AGGTG---C-AA-A----------TCT-TGA-TTTA-T-ATC--AT-AA-AC-C--G--T---TATagcga
gi|2 : cgtCGTGTAAAACGGTG-CAATA-TT-ATA-CAA------------ATC----TTG----AT-TCAT-ATGCG---A-AA-A----------TCT-TGA-TTTG-C-ATTCGAT-AA-TCTT--G--A---TGTTTATATGC--G---AATTTTTT--------A-TGT-ATAT----TCGG-------TAATCT-------------------------------------TGT-TG---------------CA--AA--A-GATTG----A-T-T----TT-------CGAT--AA-ATCTTGTTATTTAAAT-TACA--TTCTATA-------ACCT---TGC-TA-TTTATATGCGA-AAAT--TTA------GTTGTA--TATATG-AC-A------ATCGTG--ATGTTTATATGCGA-A-CATGTTTAT---------GTGT--A-T-TCGA-T-----TGT----GAT-------GT-AT-ATATTCCA-CAA-TCTTG-TTTTTTTTTATGTGC--G---AACATT--T-TGA-TTTATATACGG------TAA-----------------ATTCGATAATCTTGTAATTC-ATATTCGA----TAA-CTTA----ACGCATT---TAAATCAAACTTTTCGCATATT-GAT--A-TCAAGATTATCAAATATA-AAAC-A--AGA----GTTATG----GATAT----GAATAA-CCAA----------A-TT-------ATGGAAT--ATA----------AA-TCATTTG-TAT--A-AT---ATT-----attta
gi|2 : AATCTTG--ATTC-ATATGCGA----AAATCTTG---------------ATTT------------GCATTCGATA-A-TCTTGA------TGTTTATATGC-G--AA-TTTT-TTATG----TATATT--CG-GTAA-TCTT----------G-TTGCAAA--AG---ATTGATTTTC----GATAAATC--TTGTTATTTAAATTACATT-----CTATAACCTTGCTATTTATATGCGAAAATT-TAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAACATTTTGATTTATA-TACGGTAA-ATTCGATAATCTTG-TAATT-CATATTCGA-----Tgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaGTGTAACACGTTGGCAATA-TT-ATA-CAATGCATTTATATTACCATATTTGGTTTAT-TCAT-ATCCA---ATAA-C----------TCTATGT-TTTAGT-ATTTGAT-AATTCTTAGA--T---CATCAATATGC--GA--AAAGTTTG--------A-TTT-AAAT----aacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtT--TTATATTACCATATT--TGGTTTATTCATATCCAATAACTCTATG--------TTTTAGTATTTGATAAT-TCTTAGATCATCAATATGCGA-AAAGTTTG--ATTTAAATGCCGT---TT-----A-----AGTTA---TT--C-G-----------AATATGAATTACAAGA-TTATCGATTTCGGTATATAA--ATCAAAATGT-TCGCACCAGTTTAAAAAAAACA-GATTGTTGGA-AT---ATATACAT--CAA------ATCGAATACA--CATAACATG---TGTCGCATCCATAAACTCA-C-GAATTGTCAGTA--CTATACAATACAATTTTCGC--ATAT-AATAGCAAGG-TATAGACTGTAATTTAA--ATAAAAAGATTTATCG---------GA-------------A----GAgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcaAATCTTGG-ATTC-AAGTGCAA----AAATCTTG---------------ATATTG----------GCATTCGATAGA-TTCTGA-TA--GTTCATAATTGC-G--AA---TTTTTATG----TATACTTACG-GTAA-TCTT----------G-TTTGGAAAAAG---ATTGATCTTCC---GATAAATC--TTTTTAT--TTAA---ATTACAGTCTATA-CCTTGCTATT-ATATGCGAAAATTGTA-TTGTATAGTACTGACAATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATC-TGTTTTTTTTAAACTGG-TGCGAACATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TAATT-CATATTCGA--------ATAA--CTTAAACGGCATTTAAAT----CAAA-CTT--TTCGCATATT-GAT-GA-TCTtcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttGGCGTGTAAAACGTTG-CAATA-TC-ATA-TAA------------ATC----TTG----AT-TTAT-ATGAA---A-GA-A----------TCT-TGA-TCTA-T-ATTCAAC-AA-TCGT--A--A---TATCTATATGC--c
gi|21 : A---------ATTTTCAC--ATATAGATATCAAGATTATCG-----AATATAA--AT--CAACATTT-TCG---------GA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaaAAAACTTTG-CAA-A-CT-ATAACAA------------ATA----T------AT-TTAT-ATGCA---A-AA-A----------TTT-TGA-TTCA-T-ATTCAA---A-TCT---G--A---TATTCATATGT--GA--AAATTTT-------------------------GA-------T----TAAC--TATT-TA--TA-------------------------TG---------------CGAAAA--AGTTTTN----N-N-N-NNNNN-------NNN---NN-NNNNNN--NN-----N-NNNN--NNNNNNN-------NNNN---NNN-NN-NNNNNNNNNNN-NNNN--NNN------NNNNNN--NNNNNN-NN-N------NNNNNN--NNNNNNNNNNNNNNNN-NNNNNN--TA-GT-TTTGGT-CATT-T-TGTA-TTATTATGC----GATAAAGTTGAT-TA-AAATGCG--TAATTCTTG--TTATATATA----C--A-------------------TGTATTTGA------TAATCTCG-CTA--TTCAT-ATTCGATCATCTTGTTG--T-ATA-TCGA----T-ATCTTGATCATTATGTGCAACATATTC----------ATATGCGATA-A-TCTTGATTA-------TACATTC-AATAAATCTTG--ATT----TATATT--aaa
gi|4 : catgTGTAAAACGTTG-CAATA-TT-ACAACAA------------GTCCT--TTG----AT-TTATAATGCG---G-AA-A----------TCT-CGGTTTTG-TAATTCGGT-AA---TT--GGTT---TATTTTAAGGC--AA--AAATCTTG--------ACTTT-ATAT----TCGA--------AATCTTGT--TATT-C-----C-------A--------------TATG---------------CGA-AA--A-TCTTG----A-TCT-CTATT-------CGA---TA-TTTTT----T-----T-TA-A--TTTAATATGCAGAGATTT---TG---A-TTCAAATGCGATAAATTCTTT------GATTTA--TATTTG-AT-G------ATTTTGA-ATAATTAT----------ACTTTGATA-ATCTTTGTT----A-T-TT-A-TT-TT-T-C----GATAATCTTGATATTAATATTCAACTAA-CCGTG-TGTCTATTTA----C--ATGTATATTCAAT-TGATTTTATATTCGATACCATTAATTTTTGTTAATTTTATAATTCGATAA-------ATTTAATACTCGA----TAACCTT----------TG---AATATCA----------ATATGCGA
gi|5 : TAAAACACTG-TATTA-TT-ATA-TAA------------ATC----TTG----AT-TTAT-ATGCA---A-AA-A----------TCT-TGA-TTTA-T-ATTTGAT-AG-TTTT--A--TCAATATTCATAAAC--GA--AAATCATA--------A-TTT-GTAT----TC----------AATATAAG--C-TT-GA--TAT-------A-----------G-ACATG---------------C---AA--A-TTTTG----A-------------------A---AA----------------T-TATA--TTCGACA-------ATCTCAATGTCTA-T--ATATGTGA-AAAT--TTTTATATATGTTTA--TATTCA-AT-A------ATCTTGATATATTTCTATTTGATATCATTTTGCTATAT-ACTTGCAAAAATT-TTGA-TTGGTATGT----GATAA--TTAA-------ATGCAA-TAA-TCATGA
gi|5 : aaa--------ATTGA-TTTTAGAAAAT-TTT-TGATT-T--ATATTTGATTA-TCTTGTTATTTATA------------------------------TT--CGGC-----A-ATCT---------TCATGA-TTATTGC-------ATTTAA----------TTATCACA------TACCAAT--CAAAATTTTTG-----CAAGTATA--TAGCAAAATGATATCAAATAGAAATATATCAAGA-TTATTGAAT--ATAAA--CA-------TAT--ATA--AAA---------ATTTTCACATATATAGACATTGAGATTGTCG-----AATATAATTTT--CAAAATTT---G---------CATGTCT--------A----TATC--------AAGC-TT---ATATTGAATA-CAA-------ATTATGATTTTC-GTTTATGAATATTGATagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagtttt---A-AA-A----------TCT-CGA-TTTA-T-ATTTGAT-AAATCTT---------TATTTATGTTC--GATTAACTTTT---------A-TTT-CTGT----ACGA-------TAA-----A--TCTT-GA--TGC-------A--------------TATT---------------CAACGA--A-TTTTG----A-TGT-ACATT-------CAAT--AA-ATCTAA--AT-----C-TATA--TTCGATA-------ATCT---TAG-TA-TTCATGTGCAA-AACG--CTT------GATTTA--TATTCA-ATAA------ACCTTG----GTTTCTATGTTTTG-AATTTTTATA-TT-T--G--ATAAA-TCTT---TT-TTATATTTAAGA-AATATTGAT-GT-ACATTTTA-TAGCTCTTGA----TATATA----CTTG---GCAAAC--TCTAA-TTTATATGCGA------Tccaaatt
gi|6 : TTTT-TGTGCGAAAATTCTTTTG----T--AGGTTCGATAAATCTAG--ATTTAC-CGGTGTATATTCGATCGCATATAAATTAGAGT--TTGC----------CAAGTATATATCAAGAGCTATAAA-------ATGTAC--ATCAATATTTCTTAAA------TATAAA-A--AAGATT------TATCAAATATAAA-AAT---------TCAAA-ACATAGAAACCAAGGTTTATTGAAT--ATAAA-TCA-A-G------C-G------------------TTTTGC--ACATGAATACTAAGATTATCG-----AATATAG--AT--TTAGATTTATTGAATGTACATCA-------------A----AATT-----------CGTTG-AATA-T--GCATCAA------------GATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttTGTATATTC-ACTAAATCGTGATGTACCAGTATATT--CA-CTAAATCTT----------GATT-------ACCA-GT--ATATTCATGGGAAAA-TC--TT-TTAT--TAAT---GTT-----CGATAATCTTGTAATCTATAT--------------------------ACAT-TCTTGATTTTCAT--ATGCGA-AAA-----ATCTG-----GAT----T--------TATA---TTCAATAATCTTGTT--GTTTA---TAT-GCAAAGAGTTTTGGTTTACA-TAAGATAACC---G-TA---TTGATTA-TATATGTGCGAATAGTTTGATAAATCTT----GTTATCTATATGCAA-AAATGTTGAGT--TATACTCCAT-AA-TCTTGTTACTGAAATG-CGAAA---------TAT--ATATTCGACAATCTTGTTTCATTTTTATTTA-TATatc
gi|8 : tgatataccCATGACGTGTAAAATGATG-CAATG-TT-ACA-CAA------------ATC----TTG----AT-TTAT-ATGCA---A-AA-AAAAATAAAAATCT-TGA-TCTG-T-ATTT-------TCTC--G--T---T--CCATAT----------ATTTT------------TT-ATATGCCTTTGA--------AATTGAAAGCCACTGTA--TTC-------T-----------CTGTGTGTTCTTGGTTTCTAACCAATAATCA-TGT-G----A-C-CCATATG-------TGG---AA-ATCTTC--AT-----T-AGTA--TTCGATA-------ATTT---GGT-TATTTCTTCAGTAA-AAAT--CTT------GTTTTA--T-TTCG-AT-A------ATCTTT--ATATCTATGTGCGA-A-AATCTTGATc
gi|8 : gggtaA-AAAATTT---CA--CTGTCACGGA-GTTTATGAATAAATCAAGA-TTTTCGC-------ACATAGATATAAAGA-TTATCGAA-------ATAA--AACAAGATTTT----TACTGA--AGAAATAACCAAAT--TATCGAATAC-TA---ATGAAGA-TTTCCACAT--ATGGG-TCACATGA-TTATT-Gttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaacATGGCGTGTAAAAAGTTG-CAGTG-TT-GTA-CAG------------ATG----TTG----AT-TTAT-ATGCA---A-AA-A----------TAT-TCA-TCTG-T-ATTCGAT-AA-TTTT--A--T---CGTTTATATGC--GA--AAACTTCGATAAAGTTA-TCT-ATGT----GCCA-------AAATATT----TATT-TA--TAC-------ATCAATAATATCGTGTGTA-------------------AA--A-GGTTGCAATA-T-T-ATATAAATCATTCGAT--AATATTTTA--AT-----TATACAATTTTGATA-------ATCT---TGC-TA-TGTATATGCAA-AAAT--ATT------TATTTA--TATCTGAAA-A------ATCTAG--ATA--GATATTCGAtacttatttttgcg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111
lowQualScore : 333333333333333333333333333333333333333333 1111111111 11111111111111 11111111 11111 6666666666666666666666666666666666666666666666666666666666666666666666 1111111 11111111 11111111 111 111 444444444444444444444444444444444444444444444 555555555555555555555555555555555555555 555555555555555555555555555 1 1111 33333333 6666666666666666666666 111 33333333 2222 111 77777777777777777 11 333333333333 11111 111 11 1111111 4444444444444 111 3333333333333333 11111 3333333333333 1 1 222222222 11 1111 1111 1111111 33333 1111 222222222 1 333333333 11 22222222222222222222222222222222222222222222222222222222 22 2222 66666666666 111 2222222 1111 333333333333333333333333 9999999999999999999999999999999999999999999999 11 333333333333333 1
lowQualScore : 0 33 2 2 444 777 2 999999999999999999999999999999999999999999 777 2 33 2 2 0000000000 5 33 2 2 2 8888888888 55 77777777777777 4 22222222 33 0 2 66666 777 8888 5 33 11111 1 5555555555555555555555555555555555555555555555555555555555555555555555 44 44 3 5555555 88 55 8 55 55555555 55 4 33333333 111 1 555 1 444444444444444444444444444444444444444444444 6 6 2 77 6 88888 777777777777777777777777777777777777777 8 8 666666666666666666666666666 0 3333 3 66666666 6 3 2222222222222222222222 000 00000000 1 1 2 9999 8 111 88 6 11111111111111111 1 8 0 8 66 8 555555555555 88888 3 8 77 2 1 222 66 5 0 8 8 2 8 2 2 11 6666666 2 8888888888888 111 3 2 6666666666666666 66666 1 4444444444444 4 99 1 1 6 666666666 0 11 7777 8 7 2222 44 99 4444444 77777 1 3 7 4444 6 1 1 555555555 2 0 1 0 444444444 3 3 0 33 33333333333333333333333333333333333333333333333333333333 33 0 1 7 3 99 9 0 6 0000 00000000000 2 444 7777777 8 2222 3 3 5 8 1 8 6 0 6 0 999999999999999999999999 1 99 1 3333333333333333333333333333333333333333333333 2 11 3 666666666666666 1 1 0 0 1 1 1
lowQualScore : . .. . . ... ... . .......................................... ... . .. . . .......... . .. . . . .......... .. .............. . ........ .. . . ..... ... .... . .. ..... . ...................................................................... .. .. . ....... .. .. . .. ........ .. . ........ ... . ... . ............................................. . . . .. . ..... ....................................... . . ........................... . .... . ........ . . ...................... ... ........ . . . .... . ... .. . ................. . . . . .. . ............ ..... . . .. . . ... .. . . . . . . . . .. ....... . ............. ... . . ................ ..... . ............. . .. . . . ......... . .. .... . . .... .. .. ....... ..... . . . .... . . . ......... . . . . ......... . . . .. ........................................................ .. . . . . .. . . . .... ........... . ... ....... . .... . . . . . . . . . . ........................ . .. . .............................................. . .. . ............... . . . . . . .
lowQualScore : 9 77 7 7 777 333 7 111111111111111111111111111111111111111111 333 7 77 5 5 9999999999 0 44 5 4 4 6666666666 99 44444444444444 8 11111111 77 9 7 77777 555 3333 2 44 00000 6 2222222222222222222222222222222222222222222222222222222222222222222222 66 66 6 0000000 66 55 0 55 22222222 55 0 99999999 333 1 999 0 777777777777777777777777777777777777777777777 7 7 2 77 7 55555 333333333333333333333333333333333333333 0 0 222222222222222222222222222 0 8888 5 00000000 7 0 2222222222222222222222 000 66666666 2 0 5 0000 8 888 88 0 44444444444444444 0 0 6 0 88 0 000000000000 00000 8 0 66 8 2 000 66 4 8 0 0 2 0 2 8 00 8888888 8 7777777777777 777 7 2 3333333333333333 00000 7 7777777777777 2 88 7 7 7 555555555 8 88 0000 8 1 1111 44 66 9999999 00000 8 0 3 3333 7 0 0 000000000 1 2 0 0 000000000 2 2 2 88 00000000000000000000000000000000000000000000000000000000 88 2 0 8 2 55 2 6 2 4444 44444444444 8 000 2222222 0 8888 8 8 0 2 0 0 4 8 0 8 777777777777777777777777 0 22 0 2222222222222222222222222222222222222222222222 5 22 2 555555555555555 0 0 0 2 2 0 0
consensus : CATGGCGTGT--AAAACGTTG-CAATA-TT---AT---A-CAA------------ATC----TTG--------------------AT---TTAT-A--TGCGA-AA-A----------TCT-TG--A-TTTA-T-ATT----CG----ATAA-TCTT-------G--T---TATTCATATGC----G---A--AAATCTTGA-T-----TT-ATAT----TCGAT-AATATNANTATTCA---TACAGT-TATG--CGATAA--ATNTTG--A-T-T-ATATTCGA--TA--A-ATCTTG-ATT-T--ATA--TT--CGATAA-TCTTG------NTATT--CAT--ATGCGA-AAAT--CTT------GNTTTA--TATTCG-AT-A------ATCTTG--ATATTTATATGCGATA-AATTTTGATA-AT-TTTGGTACAAA-T-TNGATT-TT-ATGC----G-ATAA-T-TTGAT-TT-ANAT-NCGA-TAA-T-CTTGATNTNTATTTAC--------GATA---ATC---T-TG--A-TTTATATTCG-ATA--A-----TCTT----GTT----A--TTTAT-AT-TCGATAATCTTGT------TATTC-ATATNCGATAATCTTG---A--TAT-----T-A-T--ATTCGAT-A-ATCTTGA-TTA----ATATATATATGCNAA-ATNTTGTTATGTATATT--CGGTAA-TCTTGTT---AA--ATA----TTGATATT-CGAT-AAATCTTG-TTA--T--ANATTACATTCT----ATAA-CCTTGCTATTNATATGCGAAAAT-T-TNGTTGTATA-TA-TGACAA-TCNTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGATAATCTTGTT-TNTTTA---TAT-TGCGAAN--A-TTTTGATTTATA-TNCGATAA-CTTCGATAA-TCTTGATAATTCATATT-CGA-----TCGATAA-TCTT----GNTATTTATATGCGATA----AATCTTGATT-TATAT-TCGAT-AATCTTGAT-CTTATATTCGATA-TCTTGTT-ATCTATATTCGATAATNTTGTT--------ATTTATATTCGANAAT-CTT---TCGATTTATGTTCGATAAATCTTG--ATTTATACGCTGTA------A-TCGCGTATAATTT---TT--CTG-CA-ATTTATATACATATCAAGAG-TTATCGCATNTAAATCAANATTTATCGAATATNAATA-CAAGATTTT--TG--TATCAAA---TATAAATAA--CAAGA-T--TATCGAATACATANATANCAAGA-TTATNGAATATAAATCAAGATTATCGTATN--AATTTTCGC--ATATAGATANCAAGATTATCGAATATAA--ATCAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGT--AAAACGTTG-CAATA-TT---AT---A-CAA------------ATC----TTG--------------------AT---TTAT-A--TGCGA-AA-A----------TCT-TG--A-TTTA-T-ATT----CG----ATAA-TCTT-------G--T---TATTCATATGC----G---A--AAATCTTGA-T-----TT-ATAT----TCGAT-AATNTNANTATTTA---TACAGTGTATG--CGATAA--ATNTTG--A-T-T-ATATTCGA--TA--A-ATCTTG-ATT-T--ATA--TT--CGATAA-TCTTG------NTATT--CAT--ATGCGA-AAAT--CTT------GNTTTA--TATTCG-AT-A------ATCTTG--ATATTTATATGCGATA-AATNTTGATA-AT-TCTGGTACAAA-T-TNGATT-TT-ATGC----G-ATAA-T-TTGAT-TT-ATAT-NCGA-TAA-T-CTTGATTTTTATTTAC--------GACG---ATC---T-TG--A-TTTATATTCG-ATA--A-----TCTT----NTT----A--TTTAT-AT-TCGATAATCTTGT------TATTC-ATATTCGATAATCTTGTG-A--TAT-----C-A-T--ATTCGAT-A-ATCTTGA-TTA----ATATATATATNCGAA-ATCTTGTTATGTATATT--CGGTAA-TCTTGTT-------ATA----T--ATATT-CGAT-AA-TCTTG-TTA--T--ANAT---ATTCN----ATAA-CCTTGCTATTTATATGCGAAAAT-T-TAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TNCGAAN--A-TTTTGATTTATA-NNNGATAACCTTCGATAA-TCTTGATAATTCATATT-CGA-----TCGATAA-TCTT----GNTATTTATATGCGATA----AATCTTGATT-TATAT-TTAAT-AATCTTGNT-CTTATATTCGATANTCTTGTT-ATCTATATTCGATAATNTTGTT--------ATTTATATTCGANAAT-CTT---TCGATCTATATTCGATAAATCTTG--ATTTATACGCCGTA------A-TTGCATATAATTT---TT--CTG-CA-ATTTATGTATATATCAAGA--TTATCGNATATAAATCAAGATTTATCGAATATAAATAACAAGATTNT--TGA-TATCGAA---TATAAATAA--CAAAA-T--TATCGAATACATACATANCAAGA-TTATCGAATATAAATCAAGATTATCGTATN--AATTTTCGC--ATATAGATANCAAGATTATCGAATATAA--ATCAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
gi|1 : CATG-TATGT--AAAATGTTG-CAATA-TT---AA---A-CGA------------ATC----TTG--------------------AT---TTAT-A--TGCGA-AA-A----------TCT-TT--A-TTTA-T-ATT----TG----ATAA-ACTT-------G--T---TATTCATTTGC----G---A--AAATCTTGA-T-----TC-ATAT----TCAAT-AATATGAATATTTA---TACAGTGTATG--CGATAA--ATGTTG--A-T-T-ATAAGCGA---A--A-ATCTTG-ATT-T--ATA--TT--TGATAA-TCTTG------TTATT--CAT--TTGCAA-AAAT--CTT------GTTTTA--TATTCA-AT-A------ATATGG--ATATTTATATGCGATA-AATGTTGATA-AT-TCCGGTACAAA-T-TAGATT-TTTGTGC----G-ATAA-TCTTGAT-TT-TTGT-GCGA-TGA-T-CTTGATTTTTCTTTAC--------GATG---ATC---T-TG--A-TTTATAATTG-ATG--T-----TCTT----TTT----A--TTTAT-AT-TCAATAATCTTGT------TATCT-ATATTCGATGATCTTGTT-A--CATGTATAT-A-T--ATTTGAT-G-ATCTTAA-CTA----ATATATATATTCTAAGATCTTGTTATACATATT--TGATGA-TCTTATT-------ATA----T--ATATT-CGAT-GA-TCTTG-TTA--T--ACAT---ATTCG----ATGA-NNNNNNNNNNNNNNNNNNNNNNN-N-NNNNNNNNNN-NN-NNNNNN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--A-ATTTGATTTATA-ACGGATAATCTTCG-TAC-GCTTGATAAT-CATATT-CGA-----TCGATAA-TCTT----GATATTTATATGCGATA----AATCTTGATT-TATAT-TTAATGAATCTTATTTCTTATGTTTGATATTCCTGTT-ATTTATGATCGATAATATTGTT--------ATTCATATTTGATAAC-CTT---CCAATCTGTATTCGATAAATGTTG--ATCTATACACTGTA------AATTGCATATAATTT---TTTCCTG-CATACTTATATACATATCAAGA--TTATCATATATAAATCAAGATTTATCGAATATTAATAGCAAGATTAT--TGAATATCAAA---TATAAATAA--CAAGA-T--TATCAAATACATACATAGCAAGA-TTATGGAATGCAAATCAAGATGATCGCATTTTAATTTTTGC--TCATGAATATCAAGATTATTGAATATGA--ACCAAGGTTT-TCA---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGT--GAAACGATT-TAATA-TC---AT---------------------TT----TTG--------------------AT---TTAT-A----CGA-TATA----------TATATG--A-T------ATT----CT----TCAA-TCTT-------G--A---TGTTCATATGA----G---A--AAATCTTGA-T-----TTAATATATAATCGAT-AATATGGTTATTCA---T----T-TAC---CAAAAA--AAA--A--A-T-A-ATA---AA--TA--A-A----------T--AAA--TT--CGATGA-TCTTGTTACATGTATT--CAT--ATGCGA-AAAT--CTT------AC---AGCTGTTCA-AT-ATATTACATCTTG----ATTGGTATGCGA
gi|11 : CAAGATTATCGAATG--GAGAT--GC--ATATAGATAACATGATTATCGAATACAA--AACAATATTT-TCC---------CATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGT--AAAATGTCG-CAATA-TT---AT---A-TAATAATTAT-----ATC----CTC--------------------AT---GTAT-A--TGCGA-AA-A----------TCT-TG--A-TTTT-T-ATT----CG----ATAT-TCTT-------G--T---C---------------------AAATCTTCA-A-----TC-ATAT----TCAAT-AATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGC--AAAACGTTG-CAATG-TT---GT---A-CAA------------A-C----ATC--------------------ATC--CCAT-G--TGCGA-TA-A----------TCT-TG--A-TTTA-T-ATC----CA----ATAA-TCTT-------G--A---TATTTCTATGC----A---A--AAACTTTGA-T-----TT-ATAT----TTGAT-AACCTTGACATT-------CAAT---TG--C-ATAT--TCTTTG--ATT-T-GTAGTCCATTTA--A-ATGTTG-A-T-T--GTA--AC--CGATAA-TCTTT------ATATT--Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTA-TTTT---TCATA-TTCGA----CT--AGTAA-TCTTGA-AAT--ATATT-TG-------CCA-AA-TTTT----G--ATTCATATGCGATACTAAAATATTGATT-TATAT-TCGGT-AACCTT------------CGATATTTTTGTT-ATCTATATTCGATAAT
gi|14 : A-T-ATT-----G----ATAA-TCTT-------A--T---TATTTATATGC----ATGCA--AAATCTTAA-T-----TC-ATAT----TTGAT-A-----AATCCTCA---TACA---TAT----GGTAA--ATCTTG--A-TGT-ATATTCGA--TC--A-ATTTTG-ATG-TCAATA--TT--
gi|15 : GTGT--AAGACGTTA-CAATA-TC---AT---A-CAT------------GTC----TTG--------------------CT---TCAT-A--TGCGA-AA-A----------TCT-TG--C-TTTA-T-ATT----CG----ATAA-TTTT-------G--A---TATT--TATGCAA--A---A--AAAAATTGA-T-----T-------------AT-AATATAAGTAta
gi|16 : cacTTTATATGCGATA----AACCTTGATT----------------CTTCAT--TTGCATTCAATAATCTTGTT-ATCTATATTCAATAATATTGTT--------ATTTATa
gi|17 : gtATTTATATGCGATA----AATCTTGGTT-AATAT-GTAATAAATCTTGAT--TTGTATTCAATAATTTTGTT-ATCTATATTCGATAATCTTGTT--------ATTCACATcaactataaacattaaca
gi|18 : tgTGGCGTGT--AACACGTTG-TAATA-TT---CT---A-C----------------------------------------------------------------G-A----------TCT-TA--A-TTTA-T-TTC----CG----ATAA-TCTC-------T--T---TATTCATATGC----G---A--AACTCTTGC-T-----TT--TAT----Ta
gi|19 : ATGAAGTGT--AACACGTTG-CAACAATC---CT---A-CCA------------ATT----TTG--------------------AT---TTAC-A--GGTGC-AA-A----------TCT-TG--A-TTTA-T-ATC----------ATAA-AC-C-------G--T---TATagcga
gi|2 : cgtAT---ATTAT----ACAAATCTTG--ATTCATATGCGAAAATCT-TGATT-TGCA-TT-CGATAA-TCTTGATGTTTAT--ATGCGA-AT-TTTTTATGTATATTCGGT--------------------------AATCTTGTT---------------GCAAAA--------GATT--------GAT---TTTCGATAAATCTTGTTA-TTTAAATTACAT-----TCTATAA-CCTT----GCTATTTATATGCGA-A----AAT-TTAGTTGTATAT-ATGAC-AATCGTGATGTTTATATGCGA-A--CATGTTTATGTGTATTCGATTGTGATGT---------AT--ATATTCCACAAT-CTTGTTTTTTTTTATGTGCGA-ACATTTTG--ATTTATATACGGTA------A-ATTCG-ATAATCT---T-----G-TA-ATTCATAT-----TCGATAACTTAACGCATTTAAATCAAACTTT-TCGCATATTGATATCAAGATT---------ATCAAA---TATAAA--A--CAAGAGT--TAT-GGATA--TGAATAACCAAA-TTATGGAATATAAATCAattta
gi|2 : cgtgtaaaacggtgcaAATCTTG--------ATTC-ATATGCGAAAATCTTG---A--T-T-----T-G-C--ATTCGAT-A-ATCTTGA-T--------GTTTATATGCGAA--TTTT-TTATGTATATT--CGGTAA-TCTTGTTGCAAA--AGA----TTGATTTT-CGAT-AAATCTTG-TTA--TTTAAATTACATTCT----ATAA-CCTTGCTATTTATATGCGAAAAT-T-TAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--A-TTTTGATTTATA-TACGGTAA-ATTCGATAA-TCTTG-TAATTCATATT-CGA-----Ttttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaAA--ACGTTGC-A-----ATATTATA--CA--A-AT---G-ATT-T--ATA--TT--CCATAA-TTTGG------TTATT--CAT--ATCCAT-AACT--CTT------GTTTTA--TATTTG-AT-A------ATCTTG--ATATCAATATGCGA-A-AAGTTTGATaacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaTGGCGTGTGTAACACGTTGGCAATA-TT---AT---A-CAATGCATTTATATTACCATATTTGGTTT----------------AT---TCAT-A--TCCAATAA-C----------TCTATG--T-TTTAGT-ATT----TG----ATAATTCTTAG-----A--T---CATCAATATGC----G---A--AAAGTTTGA-T-----TT-AAAT----tacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagt--AAAATCTTG---ATA-TTGGCATTCGA-TAG------------ATT----CTG--------------------ATAGTTCAT-AATTGCGA-A-------------TTT-TT--A-TGTA-T-ACTTA--CG----GTAA-TCTT-------G--T---T-------TGG----A---A--AAAGATTGA-T-----CT----T----CCGATAAATCTTTTTATTTAAATTACAGTCTATA--C---------CTTGCTA-T-T-ATATGCGA---A--A-A--TTGTATTGT--ATA--GTACTGACAATTCGTG------A-GTT--TATGGATGCGACACAT--GTT-------ATGTG--TATTCG-AT-----------TTG--ATGTATATATTCCAAC-AATCT--GT---T-TTT--TTTAAA-C-TGG--------TGC----GAACAT-T-TTGAT-TT-ATATACCGA--AA-T----------------C--------GATA---ATC---T-TGTAA-TTCATATTCGAATA--A------CTTAAACGGC----A--TTTAA-AT-----CAAACTTTT------CG--C-ATATT-GATGATC-TAAG-AATTAT-----C-A-A--ATACTAA-A-ACATAGAGTTATTGGATATGAATAAACCAA-ATATGGTAATATAAAT-----GCA----TTG-T-------ATA-------ATATT--GCC-AA--CGTG-TTA--C--ACAgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgAATCTTGG-------ATTC-AAGTGCAAAAATCTTG---A--TAT-----T-GGC--ATTCGAT-AGATTCTGA-T-A----GTTCATAATTGCGAA----TTTTTATGTATACTTACGGTAA-TCTTGTTTGGAAAAAGA----TTGATCTTCCGATAAA-TCTTT-TTATTT--AAATTACAGTCT----AT-A-CCTTGCTA-TTATATGCGAAAAT-TGTA-TTGTATAGTACTGACAATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--A-TTTTGATTTATATACCGA-AA---TCGATAA-TCTTG-TAATTCATATT-CGA--------ATAA--CTTAAACGGCATTTAAAT----CA----AA-CTT--TT-CGCATATTGAT-GATCTtgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttGGCGTGT--AAAACGTTG-CAATA-TC---AT---A-TAA------------ATC----TTG--------------------AT---TTAT-A--TGAAA-GA-A----------TCT-TG--A-TCTA-T-ATT----CA----ACAA-TCGT-------A--A---TATCTATATGC----c
gi|21 : --AATTTTCAC--ATATAGATATCAAGATTATCGAATATAA--ATCAACATTT-TCG---------GA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaa--AAAACTTTG-CAA-A-CT---AT---AACAA------------ATA----T----------------------AT---TTAT-A--TGCAA-AA-A----------TTT-TG--A-TTCA-T-ATT----CA----A--A-TCT--------G--A---TATTCATATGT----G---A--AAATTTTGA-T-----T---------------------AACTATTTA---TA-------TG--CGAAAA--AGTTT-----T-N-NNNNNNNN--NN--N-NNNNNN-NNN-N--NNN--NN--NNNNNN-NNNNN------NNNNN--NNN--NNNNNN-NNNN--NNN------NNNNNN--NNNNNN-NN-N------NNNNNN--NNNNNNNNNNNNNNNN-NNNNNNNNTA-GT-TTTGGT-CATT-T-TGTATTATT-ATGC----G-ATAAAG-TTGAT-TA-AAAT-GCG--TAA-TTCTTG--TTATATATACATGTATTTGATA---ATC---T-CGCTA-TTCATATTCG-ATC--A-----TCTT----GTTGTATA--TCGAT-ATCTTGATCATTATGTGCAACATATTC-ATATGCGATAATCTTG-------AT-----T-A-TACATTCAATAA-ATCTTGA-TTT----ATATaaa
gi|4 : catgTGT--AAAACGTTG-CAATA-TT---ACA--A-CAA------------GTCCT--TTG--------------------AT---TTATAA--TGCGG-AA-A----------TCT-CG--GTTTTG-TAATT----CG----GTAA---TT-------GGTT---TATTTTAAGGC----A---A--AAATCTTGACT-----TT-ATAT----TCGA--AATCTTGTTATTC------CA---TATG--CGA-AA--ATCTTG--A-TCT-CTATTCGA--TATTT-TTTTTA-ATT-TA-ATA--TG--CAGAGA-TTTTG--------ATT--CAA--ATGCGATAAATTCTTT------GATTTA--TATTTG-AT-G------ATTTTGA-ATAATTAT----------ACTTTGATA-ATCTTTGTT----A-T-TT-ATT-TT--T-C----G-ATAA-TCTTGATATTAATAT-TCAACTAA-C-CGTG-TGTCTATTTAC---------ATGTATATTCAAT-TG--ATTTTATATTCG-ATACCATTAATTTTT----GTT----AATTTTATAAT-TCGATAA-------------ATTTAATACTCGATAACCTT-TGAA--TAT-----CAA-T--ATGCGAt
gi|5 : T--AAAACACTG-TATTA-TT---AT---A-TAA------------ATC----TTG--------------------AT---TTAT-A--TGCAA-AA-A----------TCT-TG--A-TTTA-T-ATT----TG----ATAG-TTTT-------A--TCAATATTCATAAAC----G---A--AAATCATAA-T-----TT-GTAT----TC----AATATAAGC-TTGA---TATAG-ACATG--C---AA--ATTTTG--A----------------A--A-A--------T-T--ATA--TT--CGACAA-TCTCA------ATGTCTATAT--ATGTGA-AAAT--TTTTATATATGTTTA--TATTCA-AT-A------ATCTTGATATATTTCTATTTGATATCATTTTGCTATAT-ACTTGCAAAAATT-TTGATTGGT-ATGT----G-ATAA---------TT-AAAT-GCAA-TAA-T-CATGA
gi|5 : aaa--------ATTGATTTTAGAAAAT-TTT---T-GATTTATATTTGATTA-TCTTGTTATTTATA-------------------------------TT--CGG-CA-ATCT---------TCATGA--TTATTGCATTTAA--------TTATCACATACCAAT--CAAAATTTT--TG-----CAAG---TATA--TAG--CAAAA-TGATATCAAATAGAAATATATCAAGA-TTATTGAATATAAA-CA----TAT-ATAAA--AATTTTCACATATATAGACATTGAGATTGTCGAATATAATTTTCAAAATTT---G---------CATGTCT--------A----TATC--------AAGC-TT---ATATTGAATACAA-------ATTATGATTTTC-GTTTATGAATATTGATagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttA-AA-A----------TCT-CG--A-TTTA-T-ATT----TG----ATAAATCTT--------------TATTTATGTTC----G---ATTAACTTTT-A-T-----TT-CTGT----ACGAT-AA-----ATCTTGA---TGCA---TATT--CAACGA--ATTTTG--A-TGT-ACATTCAA--TA--A-ATCTAA-ATC-T--ATA--TT--CGATAA-TCTTA------GTATT--CAT--GTGCAA-AACG--CTT------GATTTA--TATTCA-ATAA------ACCTTG----GTTTCTATGTTTTG-AATTTTTATA----TTTG--ATAAA-TCTT--TT-TT-ATATTTAAG-A-AA-TATTGAT-GT-ACAT-TTTA-TAGCT-CTTGATATATACTT----------GGCA---AAC---TCTA--A-TTTATATGCG-ATccaaatt
gi|6 : TTTTTGTGCGAAAATTCTT---TTG---TAGGTTCGATAAATCTAG--ATTTAC-CGGTGTATATTCGA-TCGCATATAAATTAGAGT--TTGCCA-A-----GTATATATCAAGAG-CTATAAAATGTACATCAATATTTCTTAAATATAAA-A--AAGATT--------TATCAAA---TATA--------AAAA-T----TCAAA-ACATAGAAACCAAGGTTTATTGAATATAAATCAAG-----CG---------TTTTGC--ACATGAATACTAAGATTATCGAATATAG--ATTTAGATTTATTGAATGTACATCA-------------A----AATT-----------CGTTG-AATA-T--GC-----------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttTGTATATT--CACTAAATCGTGAT-------GTACCAGT--ATATT-CACT-AAATCTTGATTA--CCAGTAT---ATTCATGGGAAAA-TCTT-TTATTAATGTTCGATAAT-C-TTGTAATCTA-TA-T-ACAT-TCTTGATTTTCAT--ATGCGA-AAA-----ATCTG-----GAT----T--------TATA---TTCAATAATCTTGTT--GTTTA---TAT--GCAAAG--AGTTTTGGTTTACA-TAAGATAACC----GTA----TTGATTATATATGTG-CGAATAGTTTGATAAATCTT----GTTATCTATATGCAA-A----AATGTTGAGT-TATAC-TCCAT-AATCTTGTTACTGAAATGCGA-A---------ATATATATTCGACAATCTTGTTTCATTTTTATTTATATatc
gi|8 : tgatataccCATGACGTGT--AAAATGATG-CAATG-TT---AC---A-CAA------------ATC----TTG--------------------AT---TTAT-A--TGCAA-AA-AAAAATAAAAATCT-TG--A-TCTG-T-ATTTTCTCGTTCCATA-----T-------A--T---TTTTTATATGCCTTTG---A--AA---TTGA-AAGCCACT-GTAT----TC------TCTGTGTGTTCT---TG--GTTTCTAACCAATAATCATGT-G--A-C-CCATATGTGG---A--A-ATCTTC-ATT-A--GTA--TT--CGATAA-TTTGG------TTATTT-CTT--CAGTAA-AAAT--CTT------GTTTTA--T-TTCG-AT-A------ATCTTT--ATATCTATGTGCGA-A-AATCTTGATc
gi|8 : gggtaCAAAAATAAGTAA-AAAATTTCACTGT-CA-CGGAGTTTATGAATAAATCAAGA-T--TTTCG--CACATAGATATAAAGA-TTATCGAA-ATAAAACAAGATTTT--TACT--GA-----------AGAAATAACCAAATTATCGAATACTA--ATGAAGATTT-CCA---------CA-------------ttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccataATGGCGTGT--AAAAAGTTG-CAGTG-TT---GT---A-CAG------------ATG----TTGATTTATATGCAAAAATATTCAT---CTGT-A--TTCGA-TA-A----------TTT-TATCG-TTTA-T-ATG----CG----AAAA--CTTCGATAAAG--T---TATCTATGTGC----C---A--AAATATTTA-T-----TT-ATACA---TCAAT-AATATC-GTGTGTA----AAAG-GT-TG--CAATATT-ATATAA--A-T-C-AT--TCGA--TA--ATATTTTA-ATTAT--ACAATTT--TGATAA-TCTTG------CTATG--TAT--ATGCAA-AAAT--ATT------TATTTA--TATCTGAAA-A------ATCTAG--ATA--GATATTCGAcg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111
lowQualScore : 333333333333333333333333333333333333333333 1111111111 22222222222222222222 1111 00000000000000000000000000000000000000000000000000000000000000 1111111 11 111111 111111 11111 1111 99999999999999999999999999999999999999999999999999 1 55555555555555555555555555 11 222222222 22222222 333333333333333333333333333 33333333333333333 2222222222 22222222 4444444 111 3333333333 11 33 1 1111 1 1 11 1 1 555555555555 111 111 2222222 111 11 22222222 11 1 1111 3333333 2222 888888888888888888888888888888 333 2 111 1111 44444444444 888888888888888888888888 2 2222 44444444444 111 111111111111 1 333333333333333333333333 9999999999999999999999999999999999999999999999 11 333333333333333 1
lowQualScore : 0 33 2 2 5 777777777777777777777777777777777777777777 2 2 2 0000000000 4 33 2 55555 2 7777777777 6 66666666666666666666 3 88888888 33 0 33 2 66666 555 2 0000 3 33 11111111111111111111111111111111111111111111111111111111111111 3 22 8888 3 44 88888 44 1111111 22 4 111111 1 55 4 4 111111 777 44444 4 6666 0 99999999999999999999999999999999999999999999999999 1 1 1 5 00000000000000000000000000 3 666 555 55 5 222222222 44444444 8 0 333333333333333333333333333 1 3 6 99 00000000000000000 1 5555555555 55555555 0 77 1 9999999 0 3 111 8 5555555555 0 88 8 11 888 3 33 3 77 1 44 7 4 33 5555 3 1 0 88 3 0 444444444444 777 0 000 1 2222222 444 3 11 33333333 7 88 5 7777 7 7 6666666 2 1111 7 2 111111111111111111111111111111 111 1 3 1 0 3 000 3 3 8888 66666666666 0 7 7 111111111111111111111111 3 888 1 888888 2 1 5555 11111111111 777 7 3 666666666666 9999 1 1 0 1 3 9 0 999999999999999999999999 1 99 1 3333333333333333333333333333333333333333333333 2 11 3 666666666666666 1 1 0 0 1 1 1
lowQualScore : . .. . . . .......................................... . . . .......... . .. . ..... . .......... . .................... . ........ .. . .. . ..... ... . .... . .. .............................................................. . .. .... . .. ..... .. ....... .. . ...... . .. . . ...... ... ..... . .... . .................................................. . . . . .......................... . ... ... .. . ......... ........ . . ........................... . . . .. ................. . .......... ........ . .. . ....... . . ... . .......... . .. . .. ... . .. . .. . .. . . .. .... . . . .. . . ............ ... . ... . ....... ... . .. ........ . .. . .... . . ....... . .... . . .............................. ... . . . . . ... . . .... ........... . . . ........................ . ... . ...... . . .... ........... ... . . ............ .... . . . . . . . ........................ . .. . .............................................. . .. . ............... . . . . . . .
lowQualScore : 9 77 7 7 3 777777777777777777777777777777777777777777 7 4 4 3333333333 7 22 4 99999 2 7777777777 7 88888888888888888888 9 77777777 44 1 99 5 22222 444 5 3333 2 22 77777777777777777777777777777777777777777777777777777777777777 1 22 5555 3 66 33333 66 5555555 33 0 555555 0 55 0 0 555555 000 77777 0 1111 1 00000000000000000000000000000000000000000000000000 0 0 4 0 22222222222222222222222222 9 111 999 77 7 999999999 22222222 0 1 777777777777777777777777777 0 7 7 22 88888888888888888 0 2222222222 00000000 8 44 0 8888888 8 6 888 0 2222222222 8 66 6 88 666 2 88 2 55 0 00 3 0 33 3333 3 0 7 33 3 7 555555555555 555 2 222 0 5555555 888 2 00 22222222 0 88 5 5555 3 3 3333333 5 2222 0 5 999999999999999999999999999999 000 0 0 0 0 7 333 7 7 3333 77777777777 7 3 3 333333333333333333333333 3 000 0 333333 0 0 2222 00000000000 555 0 2 555555555555 2222 0 0 0 0 2 8 8 777777777777777777777777 0 22 0 2222222222222222222222222222222222222222222222 5 22 2 555555555555555 0 0 0 2 2 0 0
consensus : CATGGCGTGT--AAAACGTTG-CAATA-TTATA-CAA------------ATC----TTG--------------------AT-TTATATGCGA-AA-A----------TCT-TG--AT-T-----TA-TATT----CG----ATAA-TCTT-------G--------T---TATTCATATGC----G---A--AAATCTTG-A-T-----TT-AT-AT----TCGATAATATNG-GTATTC--A--TAC-AGT-T---ATGCGATAA--ATNTTGA-T-T---ATATTCGA--TAA-ATCTTG--ATT-T--A-----TA--TTCGATAATCTTG------NTATT--CATATGCGAAAA-TCTT------GNTTTA--TATTCG-AT-A------ATC---TTG--AT-ATTT-ATATGCGATA-NATTTTGATA-A-TTTTGGTACAAA-T-TNGATT-T-T-ATGC----GAT-AA----T-TTGATTTATATNCGATAA-TCTTG--------AT--TTNT---ATTTAC-GATAA-T-C-T-TG--ATTTA-TAT---------TCGATAATCTTGTT--------ATTTATATTCGA-TAATCTTG-T---TATT--------CAT------ATGCGAT-AATC--TTG------AT-T-T---A-CATTCGA------T-A-ATCTTGATTA--A---TATATATACGCGAA-AT-TTGTTATGTATATT--CG-ATAATCTTGTT-----AAA-TATCGATATTC-GATAAATC--TTGTTATTTANATTACATTCTATAACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAAT-CGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGATT----G-------TATAT---TCGACAATCTTGTT-TNTTTA---TAT-TGCGAA--CATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATAATTCATATTCGATC-ATAATCTT----GGCATTTATATGCGAT----AAATCTTGATT--TATATTCGAT-AATCTT-AT---TTGCGTTCGATA-T-CTTGTTATCTATATTCGATAATATTGTTATTTATGTNCGANAACTCTTTCGATCTATNTTCGATAAATNTTGATTTATACGNTG-TA------A-TCGCGTATAATTTA-ATT--CTG-CA-ACCT--GTACATATCAAGA-TTATCGNATNTAAATCAA-ATTTATCAAATATNAATA-CAAGATTTT--TG--TATCAAA---TATAAATAA--CAAGAT--TATCAAATACATANATATCAAGA-TTATCGAATATAAATCAAGATTATCGTATN--AATTTTCGC--ATATAGATANCAAGATTATCGAATATAA--ATCAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGT--AAAACGTTG-CAATA-TTATA-CAA------------ATC----TTG--------------------AT-TTATATGCGA-AA-A----------TCT-TG--AT-T-----TA-TATT----CG----ATAA-TCTT-------G--------T---TATTCATATGC----G---A--AAATCTTG-A-T-----TT-AT-AT----TCGATAATATNA-NTATTC--A--TAC-AGT-T---ATGCGATAA--ATNTTGA-T-T---ATATTCGA--TAA-ATCTTG--ATT-T--A-----TA--TTCGATAATCTTG------NTATT--CATATGCGAAAA-TCTT------GNTTTA--TATTCG-AT-A------ATC---TTG--AT-ATTT-ATATGCGATA-AATTTTGATA-A-TTTTGGTACAAA-T-TNGATT-T-T-ATGC----GAT-AA----T-TTGATTTANATNCGATAA-TCTTG--------AT--NTNT---ATTTAC-GATAA-T-C-T-TG--ATTTA-TAT---------TCGATAATCTTGTT--------ATTTATATTCGA-TAATCTTG-T---TATT--------CAT------ATNCGAT-AATC--TTG------ATAT-T---A-TATTCGA------T-A-ATCTTGATTA--A---TATATATATGCNAA-ATNTTGTTATGTATATT--CG-GTAATCTTGTT-----AAA-TATTGATATTC-GATAAATC--TTGTTAT--ANATTACATTCTATAACCTTGCTATTNATATGCGAAAATTTNGTTGTATA-TA-TGACAAT-CNTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGATT----G-------TATAT---TCGATAATCTTGTT-TNTTTA---TAT-TGCGAA--NATTTTGATTTATAT-NCGATAA-CTTCGATAATCTTGATAATTCATATTCGATCGATAATCTT----GNTATTTATATGCGAT----AAATCTTGATT--TATATTCGAT-AATCTTGAT--CTTATATTCGATA-T-CTTGTTATCTATATTCGATAATNTTGTTATTTATATTCGANAAT-CTTTCGATTTATGTTCGATAAATCTTGATTTATACGCTG-TA------A-TCGCGTATAATTT---TT--CTG-CA-ATTTATATACATATCAAGAGTTATCGCATNTAAATCAANATTTATCGAATATNAATA-CAAGATTTT--TG--TATCAAA---TATAAATAA--CAAGAT--TATCGAATACATANATANCAAGA-TTATNGAATATAAATCAAGATTATCGTATN--AATTTTCGC--ATATAGATANCAAGATTATCGAATATAA--ATCAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
gi|1 : CATG-TATGT--AAAATGTTG-CAATA-TTAAA-CGA------------ATC----TTG--------------------AT-TTATATGCGA-AA-A----------TCT-TT--AT-T-----TA-TATT----TG----ATAA-ACTT-------G--------T---TATTCATTTGC----G---A--AAATCTTG-A-T-----TC-AT-AT----TCAATAATATGA-ATATTT--A--TAC-AGTGT---ATGCGATAA--ATGTTGA-T-T---ATAAGCGA---AA-ATCTTG--ATT-T--A-----TA--TTTGATAATCTTG------TTATT--CATTTGCAAAAA-TCTT------GTTTTA--TATTCA-AT-A------ATA---TGG--AT-ATTT-ATATGCGATA-AATGTTGATA-A-TTCCGGTACAAA-T-TAGATT-T-TTGTGC----GAT-AA----TCTTGATTTTTGTGCGATGA-TCTTG--------AT--TTTT---CTTTAC-GATGA-T-C-T-TG--ATTTA-TAA---------TTGATGTTCTTTTT--------ATTTATATTCAA-TAATCTTG-T---TATC--------TAT------ATTCGAT-GATC--TTGTTACATGTATAT---A-TATTTGA------T-G-ATCTTAACTA--A---TATATATATTCTAAGATCTTGTTATACATATT--TG-ATGATCTTATT-----A---TAT--ATATTC-GATGA-TC--TTGTTAT--ACAT---ATTCGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN-NNNNNNN-NNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNNN----N-------TATAT---TCGATGATCTTGTTATATATA---TAT-TCCAAA--AAATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATAAT-CATATTCGATCGATAATCTT----GATATTTATATGCGAT----AAATCTTGATT--TATATTTAATGAATCTT-ATTTCTTATGTTTGATA-TTCCTGTTATTTATGATCGATAATATTGTTATTCATATTTGATAAC-CTTCCAATCTGTATTCGATAAATGTTGATCTATACACTG-TA------AATTGCATATAATTT---TTTCCTG-CATACTTATATACATATCAAGA-TTATCATATATAAATCAAGATTTATCGAATATTAATAGCAAGATTAT--TGAATATCAAA---TATAAATAA--CAAGAT--TATCAAATACATACATAGCAAGA-TTATGGAATGCAAATCAAGATGATCGCATTTTAATTTTTGC--TCATGAATATCAAGATTATTGAATATGA--ACCAAGGTTT-TCA---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGT--GAAACGATT-TAATA-TCAT------------------TT----TTG--------------------AT-TTATA--CGA-TATA----------TATATG--AT-----------ATT----CT----TCAA-TCTT-------G--------A---TGTTCATATGA----G---A--AAATCTTG-A-T-----TTAAT-ATATAATCGATAATATGG-TTATTC--A--T-----T-T---AC-CAAAAA--AAA--AA-T-A---ATA---AA--TAA-A-----------T--A-----AA--TTCGATGATCTTGTTACATGTATT--CATATGCGAAAA-TCTT------AC---AGCTGTTCA-AT-ATATTACATC---TTG-----ATTG-GTATGCGA
gi|11 : CAAGATTATCGAATG--GAGAT--GC--ATATAGATAACATGATTATCGAATACAA--AACAATATTT-TCC---------CATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGT--AAAATGTCG-CAATA-TTATA-TAATAATTAT-----ATC----CTC--------------------AT-GTATATGCGA-AA-A----------TCT-TG--AT-T-----TT-TATT----CG----ATAT-TCTT-------G--------T---C---------------------AAATCTTC-A-A-----TC-AT-AT----TCAATAATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGC--AAAACGTTG-CAATG-TTGTA-CAA------------A-C----ATC--------------------ATCCCATGTGCGA-TA-A----------TCT-TG--AT-T-----TA-TATC----CA----ATAA-TCTT-------G--------A---TATTTCTATGC----A---A--AAACTTTG-A-T-----TT-AT-AT----TTGATAACCTTG-ACATTC--AATTGC-A---T---ATTC---------TTTGATT-T---GTAGTCCATTTAA-ATGTTG--A-T-T--G-----TA--ACCGATAATCTTT------ATATT--Cc
gi|13 : ct-------TGTAG---TCGATAATCTTG-G-TATTTA---TA--TGCGAATTTATTT---TTCATAT-TCG---A-CT--AGTAATCTTGA-AAT--ATATTTG--CCA-AATTTT----G--ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACC-------------TTCGATATT-TTTGTTATCTATATTCGATAAT
gi|14 : A-TATT-----G----ATAA-TCTT-------A--------T---TATTTATATGC----ATGCA--AAATCTTA-A-T-----TC-AT-AT----TTGATAA-ATC-----CTC--A--TAC-A---T---AT--GGTAA--ATCTTGA-TGT---ATATTCGA--TCA-ATTTTG--ATG-TCAA-----TA--TT
gi|15 : GTGT--AAGACGTTA-CAATA-TCATA-CAT------------GTC----TTG--------------------CT-TCATATGCGA-AA-A----------TCT-TG--CT-T-----TA-TATT----CG----ATAA-TTTT-------G--------A---TATT--TATGCAA--A---A--AAAAATTG-A-T-----T--------------ATAATATAA-GTAta
gi|16 : cacTTTATATGCGAT----AAACCTTGATT----------------CTTCAT---TTGCATTCAATAAT-CTTGTTATCTATATTCAATAATATTGTTATTTATa
gi|17 : gtTGATTTATATGCGATAAATCTTG--------GT--TAAT---ATGTA---ATAAAT-C-T-TG--ATTTG-TAT---------TCAATAATTTTGTT--------ATCTATATTCGA-TAATCTTG-T---TATT--------CAC------ATcaactataaacattaaca
gi|18 : TGGCGTGT--AACACGTTG-TAATA-TTCTA-C-----------------------------------------------------------G-A----------TCT-TA--AT-T-----TA-TTTC----CG----ATAA-TCTC-------T--------T---TATTCATATGC----G---A--AACTCTTG-C-T-----TT--T-AT----Ta
gi|19 : ATGAAGTGT--AACACGTTG-CAACAATCCTA-CCA------------ATT----TTG--------------------AT-TTACAGGTGC-AA-A----------TCT-TG--AT-T-----TA-TATC----------ATAA-AC-C-------G--------T---TATagcga
gi|2 : cgtCGTGT--AAAACGGTG-CAATA-TTATA-CAA------------ATC----TTG--------------------AT-TCATATGCGA-AA-A----------TCT-TG--AT-T-----TG-CATT----CG----ATAA-TCTT-------G--------A---TGTTTATATGC----G---A--AT-TTTTT-A-T-----GT-AT-AT----TCGGTAATCTT------------------GT-T-----GCAA--A--AGATTGA-T-T------TTCGA--TAA-ATCTTGTTATT-T--AAATTACA--TTCTATAACCTTG------CTATT--TATATGCGAAAA-TTTA------GTTGTA--TATATG-AC-A------ATC---GTG--AT-GTTT-ATATGCGA-A-CATGTTTAT---------GTGTA---T-TCGATT-------GT----GAT-G-----------TATATATTCCACAA-TCTTG--------TT--TTTTTTTATGTGC-GAACA-T-T-T-TG--ATTTA-TATACGGTAAATTCGATAATCTTGTA--------ATTCATATTCGA-TAA-CTTA------ACG--------CAT-------TTAAATCAAAC--TT----------T-TCGCA-TATT-GA------T---ATCAAGATTATCA---AATATA-AAACAAG-A----GTTATGGATAT----GAATAACC----------AAATTATGGA-AT----ATAAATCATTTG-TATA-ATATTGCAattta
gi|2 : AATCTTG------ATT--------CAT------ATGCGAA-AATC--TTG------AT-T-T---G-CATTCGA------T-A-ATCTTGAT---------GTTTATATGCGAA--TTTT-TTATGTATATT--CG-GTAATCTTGTTGCA--AAA-GATTGATTTTC-GATAAATC--TTGTTATTTAAATTACATTCTATAACCTTGCTATTTATATGCGAAAATTTAGTTGTATA-TA-TGACAAT-CGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGATT----GTGATGTATATAT---TCCACAATCTTGTT-TTTTTT---TATGTGCGAA--CATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TAATTCATATTCGATacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaTGGCGTGTGTAACACGTTGGCAATA-TTATA-CAATGCATTTATATTACCATATTTGGTTT----------------AT-TCATATCCAATAA-C----------TCTATG--TT-T-----TAGTATT----TG----ATAATTCTTAG-----A--------T---CATCAATATGC----G---A--AAAGTTTG-A-T-----TT-AA-ATG---CCGTT--TA-AG-TTATTCGAA--TATGAAT-T---ACAAGAT-----TATCGA-T-TTCGGTAT---A--TAA-ATCaacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagtAATCTTG-G----ATT--------CAA------GTGCAAA-AATC--TTG------ATAT-T---GGCATTCGA------T-AGATTCTGAT-A--G---TTCATAATTGCGAA----TTTTTATGTATACTTACG-GTAATCTTGTTTGGAAAAA-GATTGATCTTCCGATAAATC--TTTTTATTTAAATTACAGTCTATA-CCTTGCTATT-ATATGCGAAAATTGTATTGTATAGTACTGACAATTCGTGA-GTTTATGGATGCGACACATGTT-ATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAA--CATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TAATTCATATTCGA---ATAA-CTTAAACGGCATTTAAAT----C----AAA-CTT--TTCGCATATT-GAT-GATCTaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttGGCGTGT--AAAACGTTG-CAATA-TCATA-TAA------------ATC----TTG--------------------AT-TTATATGAAA-GA-A----------TCT-TG--AT-C-----TA-TATT----CA----ACAA-TCGT-------A--------A---TATCTATATGC----c
gi|21 : --AATTTTCAC--ATATAGATATCAAGATTATCGAATATAA--ATCAACATTT-TCG---------GA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaa--AAAACTTTG-CAA-A-CTATAACAA------------ATA----T----------------------AT-TTATATGCAA-AA-A----------TTT-TG--AT-T-----CA-TATT----CA----A--A-TCT--------G--------A---TATTCATATGT----G---A--AAATTTTG-A-T-----T---------------------AA-CTATTT--A--TA-----------TGCGAAAA--AGTTT---T-N---NNNNNNNN--NNN-NNNNNN--NNN-N--N-----NN--NNNNNNNNNNNNN------NNNNN--NNNNNNNNNNNN-NNNN------NNNNNN--NNNNNN-NN-N------NNN---NNN--NN-NNNN-NNNNNNNNNN-NNNNNNNNTA-G-TTTTGGT-CATT-T-TGTATTAT-T-ATGC----GATAAA----G-TTGATTAAAATGCG-TAATTCTTGTTATATATAC--ATGT---ATTT---GATAA-T-C-T-CGCTATTCA-TAT---------TCGATCATCTTGTT--------G--TATA-TCGA-T-ATCTTGAT---CATTATGTGCAACATATTCATATGCGAT-AATC--TTG------ATTA-T---A-CATTCAA------TAA-ATCTTGATTT--A---TATaaa
gi|4 : catgTGT--AAAACGTTG-CAATA-TTACAACAA------------GTC----CT---------------------------------------------------T-TG--AT-T-----TA-TA------------------------------------------------ATGC----G---G--AAATCTCG-GTT-----TT-GTAAT----TCGGTAAT-TGGTTTATTT-----TA--AG--------GCAA-AA--ATCTTGA-C----------------------------TT-T--A-----TA--TTCGA-AATCTTG------TTATTC-CATATGCGAAAA-TCTT------GATCTC--TATTCG-AT-A------TTT---TTT--TTAATTTAATATGC-AGA-GATTTTGAT----T-------CAA---------------ATGC----GAT-AAATTCT-TTGATTTATATTTGATGA-TTTTGA-------ATAATTAT---ACTT-T-GATAA-T-CTT-TGTTATTTATTTT---------TCGATAATCTTGAT--------ATTAATATTCAACTAACCGTG-TGTCTATT--------TAC------ATGT-AT-ATTCAATTG------ATTT-T---A-TATTCGATACCATT-A-ATTTTTGTTA--ATTTTATA-ATTCGATAA-AT----TTA---ATACT--CG-ATAACCT--TT-----GAA-TATCAATATGC-GAt
gi|5 : T--AAAACACTG-TATTA-TTATA-TAA------------ATC----TTG--------------------AT-TTATATGCAA-AA-A----------TCT-TG--AT-T-----TA-TATT----TG----ATAG-TTTT-------A--------TCAATATTCATAAAC----G---A--AAATCATA-A-T-----TT-GT-AT----TC---AATATAA-GC-TTG--A--TAT-AGA-C---ATGC---AA--ATTTTGA------------------AA-A---------T-T--A-----TA--TTCGACAATCTCA------ATGTCTATATATGTGAAAA-TTTTTATATATGTTTA--TATTCA-AT-A------ATC---TTGATAT-ATTT-CTATTTGATATCATTTTGCTATA-TACTTGCAAAAATT-TTGATTGG-T-ATGT----GAT-AA-----------TTAAATGCAATAA-TCATG--------A
gi|5 : aaaTTTGGATTGATTTTAGAAAATTTTTGATTTATAT-TTGATT------A-TCTTGT-T-ATTTATATT--CGG-CA-ATCT---------TCATGA-TTATTGCATTTAA--------TTATCACATACCAAT--CAAAATTTT--TG-----CAAG---TAT--ATAG--CAAAATGATATCAAATAGAAATATATCAAGA-TTATTGAATATAAA-CA----TAT-ATAAA--AATTTTCACATATATAGACATTGAGATTGTCGAATATAATTTTCAAAATTT---G---------CATGTCT--------A----TATC--------AAGC-TT---ATATTGAATACAA-------ATTATGATTTTC-GTTTATGAATATTGATagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttA-AA-A----------TCT-CG--AT-T-----TA-TATT----TG----ATAAATCTT--------------------TATTTATGTTC----G---ATTAACTTTT--A-T-----TT-CT-GT----ACGATAA-ATC-----TTG--A--TGC-A---T---ATTCAACGA--ATTTTGA-TGT---ACATTCAA--TAA-ATCTAA--ATC-T--A-----TA--TTCGATAATCTTA------GTATT--CATGTGCAAAAC-GCTT------GATTTA--TATTCA-ATAA------ACC---TTG-----GTTT-CTATGTTTTG-AATTTTTATA----TTTG--ATAAA-TCTT--TT-T-T-ATATTTAAGA--AA----TATTGATGTACATTTTATAGCTCTTG--------AT--ATAT---ACTT---GGCAA-A-C-TCTA--ATTTA-TAT---------GCGATtt
gi|6 : TTTTTGTGCGAAAATTCTTTTG---TAGGTTCGATAAATCTAGATTTAC-CGGTG-TATATTCGA-TCGCATATAAATTAGAGT--TTGCCA-A-----GTATATATCAAGAGCTATAAAATGTACATCAATATTTCTTAAATATAAA-A--AAGATT--------TATCAAA---TATAAA-AA--T---------TCAAA-ACATAGAAACCAAGGTTTATTGAATATAAATCAAG-----CG---------TTTTGC--ACATGAATACTAAGATTATCGAATATAG--ATTTAGATTTATTGAATGTACATCA-------------A----AATT-----------CGTTG-AATA-T--GC-----------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaactttt-AA-A----------TCG-TG--ATGTACCAGTA-TATT----CA----CTAAATCTT-------GATTACCAGTA--TATTCAT--GG----G---A--AAATCTTTTA-T-----TA-AT-GT----TCGATAATCTT--GTAATC-----TA------T---ATAC-AT-----TCTTGA-T-TTTCATATGCGA--AAA-ATCTGG--ATT-T--A-----TA--TTCAATAATCTTG------TTGTT--TATATGCAAAGAGTTTT------GGTTTA--CATAAG-AT-A------ACCGTATTG--ATTATAT-ATGTGCGA-A-TAGTTTGATA-AATCTTG--------T-T--ATC-TAT-ATGC----AAA-AA----TGTTGAGTTATACTCCATAA-TCTTG---------------------TTACTGA-AA-TGC-G-AA--ATATA-TAT---------TCGACAATCTTGTTTCATTTTTATTTATATatc
gi|8 : tgatatacctgtatattcactCATGACGTGT--AAAATGATG-CAATG-TTACA-CAA------------ATC----TTG--------------------AT-TTATATGCAA-AA-AAAAATAAAAATCT-TG--AT-C-----TG-TATTTTCTCGTTCCATA-----T-------A--------T---TTTTTATATGCCTTTG---A--AA---TTG-A-AAGCCACT-GT-AT----TC-----TCTGT-GTGTTC--T--TG---GT-TTCTAACCAATAATCATGT-GA-C-CC--ATATGTGG---AA-ATCTTC--ATT-A--G-----TA--TTCGATAATTTGG------TTATTT-CTTCAGTAAAAA-TCTT------GTTTTA--T-TTCG-AT-A------ATC---TTT--AT-ATCT-ATGTGCGA-A-AATCTTGATc
gi|8 : gggtaCAAAAATAAGTA-AAAAATTTCACTG--TCACGGAGTTTATGAATAAATCAAGAT--TTTCG--CACATAGATATAAAGA-TTATCGAA-ATAAAACAAGATTTT--TACT--GA-----------AGAAATAACCAAATTATCGAATACTA--ATGAAGATTT-CCA---------CA-------------ttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccataATGGCGTGT--AAAAAGTTG-CAGTG-TTGTA-CAG------------ATG----TTGATTTATATGCAAAAATATTCAT-CTGTATTCGA-TA-A----------TTT-TATCGT-T-----TA-TATG----CG----AAAA--CTTCGATAAAG--------T---TATCTATGTGC----C---A--AAATATTT-A-T-----TT-AT-ACA---TCAATAATATC--GTGTGT--A--AAA-GGT-T-----GCAATATT-ATATAAA-T-C---AT--TCGA--TAATATTTTA--ATTAT--A-----CAATTTTGATAATCTTG------CTATG--TATATGCAAAAA-TATT------TATTTA--TATCTGAAA-A------ATC---TAG--AT-A--G-ATATTCGAcg
Alignments
lowQualScore : 222222222222 1111111111 111111111111111 11111111 99999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111 1111111 111111 111111 11 1111 555555555555555555555555555555 333 444444444444444444444444444 222222222 33333333 333333333333 222222222 1111111 1111 111 4444444 1111 1 4444444444 1 1 1 1 1111 1 1 11 1 1 4444444444444 111 111 111 11 111 11 2222222 11 1 444444444444444444444 2222 1111 444444444444444444444444 111 1 1 111 1 2222222222 888888888888888888888888888888888888888888888888888888 22222222 2222 22222222 55555555555 111 22222222222222222 11 555555555555555555555555555555555 11111 8888888888888888888888888888888888888888888888 11 333333333333333 1
lowQualScore : 0 33 2 2 2 2 222222222222 9999 5555 2 2 2 2 0000000000 5 2 2 66666 2 2 5555555555 4 888888888888888 3 99999999 0 22222222 2 66666 33 8888 3 2 44444444444444444444444444444444444444444444444444444444444444444444444444444444 44 3 1 555 0 3 22222222 55 6666666 99 4 4 777 222222 1 66 4 222222 777 00 4 0 0 4 6666 1 111111111111111111111111111111 333 5 5 1 1 5 5 5 444444444444444444444444444 3 6 6 99 99 6 666666666 3 88888888 1 6 444444444444 1 4 6 2 3 666666666 4444444 6 88 6 1 9999 1 000 1111111 0 7777 0 3 0 6666666666 6 66 3 0 3 3 2 3 1 9 0 2 0 22 5555 3 0 88 3 0 8888888888888 777 0 444 777 33 444 2 00 8888888 7 88 5 444444444444444444444 1 2 1111 7 2 5555 000000000000000000000000 0 111 0 0 777 7 7 0 0 11 1 88 3333333333 1 9 1 333333333333333333333333333333333333333333333333333333 3 8 8 77777777 1 1 0 8 1111 5 99 1 22222222 00000000000 111 44444444444444444 1 999 1 1 88 6 2 99 00 1 999999999999999999999999999999999 77777777 4 5 5 22222 66 66 1111111111111111111111111111111111111111111111 2 11 3 666666666666666 1 1 0 0 1 1 1
lowQualScore : . .. . . . . ............ .... .... . . . . .......... . . . ..... . . .......... . ............... . ........ . ........ . ..... .. .... . . ................................................................................ .. . . ... . . ........ .. ....... .. . . ... ...... . .. . ...... ... .. . . . . .... . .............................. ... . . . . . . . ........................... . . . .. .. . ......... . ........ . . ............ . . . . . ......... ....... . .. . . .... . ... ....... . .... . . . .......... . .. . . . . . . . . . . . .. .... . . .. . . ............. ... . ... ... .. ... . .. ....... . .. . ..................... . . .... . . .... ........................ . ... . . ... . . . . .. . .. .......... . . . ...................................................... . . . ........ . . . . .... . .. . ........ ........... ... ................. . ... . . .. . . .. .. . ................................. ........ . . . ..... .. .. .............................................. . .. . ............... . . . . . . .
lowQualScore : 9 77 7 7 7 7 333333333333 3333 7777 7 7 5 5 9999999999 0 5 5 22222 4 4 4444444444 7 888888888888888 2 44444444 9 33333333 7 77777 33 3333 0 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111 66 3 2 777 7 6 44444444 00 4444444 55 4 4 222 888888 0 11 4 888888 888 66 4 4 9 4 6666 4 888888888888888888888888888888 888 7 7 0 7 7 7 7 777777777777777777777777777 5 7 7 22 22 7 777777777 5 33333333 8 7 444444444444 7 0 7 2 5 777777777 0000000 7 33 7 0 8888 0 000 5555555 8 2222 0 2 2 8888888888 8 88 2 0 2 2 5 2 0 8 2 3 7 00 3333 3 7 33 3 7 8888888888888 555 2 222 555 22 000 5 22 5555555 0 88 5 555555555555555555555 4 5 2222 0 5 5555 000000000000000000000000 2 000 0 0 555 3 3 0 7 77 0 00 0000000000 0 8 0 555555555555555555555555555555555555555555555555555555 8 0 0 44444444 0 0 8 0 6666 8 22 0 88888888 55555555555 777 77777777777777777 7 000 0 8 33 7 2 22 22 4 000000000000000000000000000000000 55555555 2 9 0 55555 99 99 9999999999999999999999999999999999999999999999 5 22 2 555555555555555 0 0 0 2 2 0 0
consensus : CATGGCGTGT--AAAACGTTG-CAATA-TTAT-A-CAA------------ATC----TTG----AT-TTAT-ATGCGA-AA-A----------TCT-TGA-T-T-----TA-T-ATT----CG----ATAA-TCTT--G--------T---TATTCATATGC----G---AAAATCTTG--------A-T-----TT-ATAT----TCGATAATATNGNTATTC--A--TAC-A---------T-T---ATGCGATAA--ATNTTG----A-T-T---AT-------ATTCGA--TA--A-ATCTTG--ATT-T--A-----TA--TTCGATAATCTTG------NTATT--CATATGCGA-AAA-T--CTT------GNTTTA--TATTCG-ATA------ATC---TTG--AT-ATTTATATGCG-ATA-CATNTTGATA-A-T-TTTGGTACA-A-TTNGATT-T-T-ATGCGATAA-T-TTGAT-TT-ATATGCGA-TAA-T-CTTG-TTTNT---ATNTAC--------G---ATAA-T-C--TTG--A-TTTATAT---------TCGATAATCTTGTT--------ATTNATAT-TCGATAATCTT---GT------TATTCANATGCGANAATCTTG--------AT-T-T-G-CAT-TCGATA-A-TCTTGATTA--ATATATATATGCGAA-AT-TTGTTATGTATATT--CG-GTAATCTTGTT--G--AAA-NATTGATNTTC-GATAAATCTTGTTATTTANATTACATTCTATGACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATAATTCATATTCGACC-ATAATCTT----G--GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATCTTATTT---ATATT-CGATA-T-CTT-GTT-ATCTATATTCGATAA---TATTGTTATTTA-TATTCGATAATTCTT---TCGATCNATATTCGATAAATTTTGATTTATACGNTG-TA------A-TCGCGTATAANTTA-ATTCTGC-A-ATNTGTA--TATATCAAGA-TT-ATC-------GNATATAAATC-AA-AT-TTNTCG--AATATNAATA-C-A--AGATTTT--TG---ATCGAA---TATAAATAA--CAAGAT--T-ATCGAATACATANATANCAAGA-TT-ATCGAAT--ATAAA-TCAAG-ATT-ATC-GTAC---------N--AAT-----TT--TCGC--ACATAGATANCAAGATT-ATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGT--AAAACGTTG-CAATA-TTAT-A-CAA------------ATC----TTG----AT-TTAT-ATGCGA-AA-A----------TCT-TGA-T-T-----TA-T-ATT----CG----ATAA-TCTT--G--------T---TATTCATATGC----G---AAAATCTTG--------A-T-----TT-ATAT----TCGATAATATNGGTATTC--A--TAC-A--------GT-T---ATGCGATAA--ATNTTG----A-T-T---AT-------ATTCGA--TA--A-ATCTTG--ATT-T--A-----TA--TTCGATAATCTTG------NTATT--CATATGCGA-AAA-T--CTT------GNTTTA--TATTCG-ATA------ATC---TTG--AT-ATTTATATGCG-ATA-NATTTTGATA-A-T-TTTGGTACAAA-TTNGATT-T-T-ATGCGATAA-T-TTGAT-TT-ATATNCGA-TAA-T-CTTGATTTNT---ATTTAC--------G---ATAA-T-C--TTG--A-TTTATAT---------TCGATAATCTTGTT--------ATTTATAT-TCGATAATCTT---GT------TATTCATATGCGATAATCTTG--------AT-T-T-A-CAT-TCGATA-A-TCTTGATTA--ATATATATACGCGAA-AT-TTGTTATGTATATT--CG-ATAATCTTGTT-----AAA-TATCGATATTC-GATAAATCTTGTTATTTANATTACATTCTATAACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATAATTCATATTCGATC-ATAATCTT----G--GCATTTATATGCGATA----AATCTTGATT--TATATTCGAT-AATCTTATTT---GCGTT-CGATA-T-CTT-GTT-ATCTATATTCGATAA---TATTGTTATTTA-TGTNCGANAACTCTT---TCGATCTATNTTCGATAAATNTTGATTTATACGNTG-TA------A-TCGCGTATAATTTA-ATTCTGC-A-ACCTGTA--CATATCAAGA-TT-ATC-------GNATNTAAATC-AA-AT-TTATCA--AATATNAATA-C-A--AGATTTT--TG--TATCAAA---TATAAATAA--CAAGAT--T-ATCAAATACATANATATCAAGA-TT-ATCGAAT--ATAAA-TCAAG-ATT-ATC-GTAT---------N--AAT-----TT--TCGC--ATATAGATANCAAGATT-ATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
gi|1 : CATG-TATGT--AAAATGTTG-CAATA-TTAA-A-CGA------------ATC----TTG----AT-TTAT-ATGCGA-AA-A----------TCT-TTA-T-T-----TA-T-ATT----TG----ATAA-ACTT--G--------T---TATTCATTTGC----G---AAAATCTTG--------A-T-----TC-ATAT----TCAATAATATGAATATTT--A--TAC-A--------GTGT---ATGCGATAA--ATGTTG----A-T-T---AT-------AAGCGA---A--A-ATCTTG--ATT-T--A-----TA--TTTGATAATCTTG------TTATT--CATTTGCAA-AAA-T--CTT------GTTTTA--TATTCA-ATA------ATA---TGG--AT-ATTTATATGCG-ATA-AATGTTGATA-A-T-TCCGGTACAAA-TTAGATT-T-TTGTGCGATAA-TCTTGAT-TT-TTGTGCGA-TGA-T-CTTGATTTTT---CTTTAC--------G---ATGA-T-C--TTG--A-TTTATAA---------TTGATGTTCTTTTT--------ATTTATAT-TCAATAATCTT---GT------TATCTATATTCGATGATCTTGTTACATGTAT-A-T-A-TAT-TTGATG-A-TCTTAACTA--ATATATATATTCTAAGATCTTGTTATACATATT--TG-ATGATCTTATT-----A---TAT--ATATTC-GATGA-TCTTGTTAT--ACAT---ATTCGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN-NNNNNN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATAAT-CATATTCGATCGATAATCTT----G--ATATTTATATGCGATA----AATCTTGATT--TATATTTAATGAATCTTATTTCTTATGTT-TGATA-TTCCT-GTT-ATTTATGATCGATAA---TATTGTTATTCA-TATTTGATAAC-CTT---CCAATCTGTATTCGATAAATGTTGATCTATACACTG-TA------AATTGCATATAATTTT-TTCCTGC-ATACTTATATACATATCAAGA-TT-ATC-------ATATATAAATC-AAGAT-TTATCG--AATATTAATAGC-A--AGATTAT--TGAATATCAAA---TATAAATAA--CAAGAT--T-ATCAAATACATACATAGCAAGA-TT-ATGGAAT--GCAAA-TCAAG-ATG-ATC-GCAT---------TTTAAT-----TT--TTGC--TCATGAATATCAAGATT-ATTG-----AATATGA--AC--CAAGGTTT-TCA---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGT--GAAACGATT-TAATA-TCAT-------------------TT----TTG----AT-TTAT-A--CGA-TATA----------TATATGA-T------------ATT----CT----TCAA-TCTT--G--------A---TGTTCATATGA----G---AAAATCTTG--------A-T-----TTAATATATAATCGATAATATGGTTATTC--A--T-------------T-T---AC-CAAAAA--AAA--A----A-T-A---AT-------A---AA--TA--A-A-----------T--A-----AA--TTCGATGATCTTGTTACATGTATT--CATATGCGA-AAA-T--CTT------AC---AGCTGTTCA-ATATATTACATC---TTG-----ATTGGTATGCG-A
gi|11 : CAAG-ATT-ATC-GAAT---------G--GAG-----AT----GC--ATATAGATAACATGATT-ATCG-----AATACAA--AA--CAATATTT-TCC---------CATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGT--AAAATGTCG-CAATA-TTAT-A-TAATAATTAT-----ATC----CTC----AT-GTAT-ATGCGA-AA-A----------TCT-TGA-T-T-----TT-T-ATT----CG----ATAT-TCTT--G--------T---C-------------------AAATCTTC--------A-A-----TC-ATAT----TCAATAATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGC--AAAACGTTG-CAATG-TTGT-A-CAA------------A-C----ATC----ATCCCAT-GTGCGA-TA-A----------TCT-TGA-T-T-----TA-T-ATC----CA----ATAA-TCTT--G--------A---TATTTCTATGC----A---AAAACTTTG--------A-T-----TT-ATAT----TTGATAACCTTGACATTC--AATTGC-A-----------T---ATTC---------TTTG----ATT-T---GT-------AGTCCATTTA--A-ATGTTG--A-T-T--G-----TA--ACCGATAATCTTT------ATATT--Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATAT-TCGA----CT--AGTAATCTTGA-AAT--ATATTTG-CC-A-AATTTT----G----ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACCTT-------------CGATA-T-TTTTGTT-ATCTATATTCGATAA---T
gi|14 : A-T-ATT-----G----ATAA-TCTT--A--------T---TATTTATATGC----ATGCAAAATCTTA--------A-T-----TC-ATAT----TTGATAA-ATC----CTC--A--TAC-A-----------T---AT--GGTAA--ATCTTG----A-TGT---AT-------ATTCGA--TC--A-ATTTTG--ATG-TCAA-----TA--TT
gi|15 : GTGT--AAGACGTTA-CAATA-TCAT-A-CAT------------GTC----TTG----CT-TCAT-ATGCGA-AA-A----------TCT-TGC-T-T-----TA-T-ATT----CG----ATAA-TTTT--G--------A---TATT--TATGCAA--A---AAAAAATTG--------A-T-----T-------------ATAATATAAGTAta
gi|16 : cacTTTATATGCGATA----AACCTTGATT--C---TTC----------ATTT---GCATT-CAATAAT-CTT-GTT-ATCTATATTCAATAA---TATTGTTATTTA-Ta
gi|17 : gtTGAT-TT-ATATGCGA-TAAAT-CTTGGTTAAT---ATGTA-------------ATAAAT-C--TTG--A-TTTGTAT---------TCAATAATTTTGTT--------ATCTATAT-TCGATAATCTT---GT------TATTCACATcaactataaacattaaca
gi|18 : TGGCGTGT--AACACGTTG-TAATA-TTCT-A-C--------------------------------------------G-A----------TCT-TAA-T-T-----TA-T-TTC----CG----ATAA-TCTC--T--------T---TATTCATATGC----G---AAACTCTTG--------C-T-----TT--TAT----Ta
gi|19 : ATGAAGTGT--AACACGTTG-CAACAATCCT-A-CCA------------ATT----TTG----AT-TTAC-AGGTGC-AA-A----------TCT-TGA-T-T-----TA-T-ATC----------ATAA-AC-C--G--------T---TATagcga
gi|2 : cgtCGTGT--AAAACGGTG-CAATA-TTAT-A-CAA------------ATC----TTG----AT-TCAT-ATGCGA-AA-A----------TCT-TGA-T-T-----TG-C-ATT----CG----ATAA-TCTT--G--------A---TGTTTATATGC----G---AAT-TTTTT--------A-T-----GT-ATAT----TCGGTAATCTTG---------------------------T----TGCAA--A--AGATTG----A-T-T-------------TTCGA--TA--A-ATCTTGTTATT-T--AAATTACA--TTCTATAACCTTG------CTATT--TATATGCGA-AAA-T--TTA------GTTGTA--TATATG-ACA------ATC---GTG--AT-GTTTATATGCG-A-A-CATGTTTAT----------GTGTA---TTCGATT-------GTGATG--------T-AT-ATATTCCA-CAA-T-CTTGTTTTTTTTTATGTGC--------G---AACA-T-T--TTG--A-TTTATATACGGTAAATTCGATAATCTTGTA--------ATTCATAT-TCGATAA-CTTAACG-------CATTTAAAT----CAAACTT----------T-T-C-G-CATATTGAT--A-TCAAGATTATCAAATATA-AAACAAG-A----GTTATGGATAT----GAATAACC----------AAATTATGGA-AT----ATAAATC-----ATTTGTATAATATTattta
gi|2 : AATCTT---G--------ATTCATATGCGAAAATCTTG--------AT-T-T-G-CAT-TCGATA-A-TCTTGAT------GTTTATATGCGAA--T-TTTTTATGTATATT--CG-GTAATCTTGTTGCA--AAA-GATTGATTTTC-GATAAATCTTGTTATTTAAATTACATTCTATAACCTTGCTATTTATATGCGAAAATTTAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TAATTCATATTCG----ATAA-CTT----AACGCATTTAAATgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaTGGCGTGTGTAACACGTTGGCAATA-TTAT-A-CAATGCATTTATATTACCATATTTGGTTTAT-TCAT-ATCCAATAA-C----------TCTATGT-T-T-----TAGT-ATT----TG----ATAATTCTTAGA--------T---CATCAATATGC----G---AAAAGTTTG--------A-T-----TT-AAATG---CCGTT--TA-AGTTATTCGAA--TATGA--------AT-T---ACAAGAT-----TATCG----A-T-TTCGGT-------AT---A--TA--A-ATCcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagtATTT---ATATTACCATA-T-TTG-GTTTATTCATATCCAATAACTCTAT-GTT--TTAGTATTTGATAATTCTTAGATC-ATCAATATGCGA-AAAGTTTGATTTA---------A------A-TGCCGTTTAAGTT--ATTC-G--A-ATATGAA--T-TA-CAAGA-TT-ATCGATTTCGGTATATAAATCAAA-ATGTTCGCACCAGTTTAAAAA-A-AACAGATTGT--TG------GAA---TATATACAT--CAA-------ATCGAATAC--ACATAACATG---T-GTCGCATCCATAAACTCACGAATT-GTCAGTACTATACAATAC--AAT-----TT--TCGC--ATATA-ATAGCAAGG-T-ATAGACTGTAATTTAA--ATAAAAAGATTTATCG---------GA-------------A----GAaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcAATCTT---GG-------ATTCAAGTGCAAAAATCTTG--------ATAT-T-GGCAT-TCGATAGA-TTCTGAT-A--GTTCATAATTGCGAA--T-TT-TTATGTATACTTACG-GTAATCTTGTTTGGAAAAA-GATTGATCTTCCGATAAATCTTTTTATTTAAATTACAGTCTAT-ACCTTGCTA-TTATATGCGAAAATTGTATTGTATAGTACTGACAATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TAATTCATATTCGA---ATAA-CTTAAACG--GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-GATCTtcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttGGCGTGT--AAAACGTTG-CAATA-TCAT-A-TAA------------ATC----TTG----AT-TTAT-ATGAAA-GA-A----------TCT-TGA-T-C-----TA-T-ATT----CA----ACAA-TCGT--A--------A---TATCTATATGC----c
gi|21 : --AAT-----TT--TCAC--ATATAGATATCAAGATT-ATCG-----AATATAA--AT--CAACATTT-TCG---------GA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaa--AAAACTTTG-CAA-A-CTAT-AACAA------------ATA----T------AT-TTAT-ATGCAA-AA-A----------TTT-TGA-T-T-----CA-T-ATT----CA----A--A-TCT---G--------A---TATTCATATGT----G---AAAAT--------------------------T----TTGAT----TAACTATTT--A--TA-------------------TGCGAAAA--AGTTT-------T-N---NN-------NNNNNN--NN--N-NNNNNN--NNN-N--N-----NN--NNNNNNNNNNNNN------NNNNN--NNNNNNNNN-NNN-N--NNN------NNNNNN--NNNNNN-NNN------NNN---NNN--NN-NNNNNNNNNNN-NNN-NNNNNNNNTA-G-T-TTTGGT-CATT-TTGTATTAT-T-ATGCGATAAAG-TTGAT-TA-AAATGCG--TAA-TTCTTG--TTAT---ATATACATGTATTTG---ATAA-T-C--TCGCTA-TTCATAT---------TCGATCATCTTGTTGTAT----ATCGATATCTTGATCATTAT---GTGCAACATATTCATATGCGATAATCTTG--------AT-TAT-A-CAT-TCAATA-AATCTTGATTT--ATATaaa
gi|4 : catgTGT--AAAACGTTG-CAATA-TTACAA-CAA------------GTCCT--TTG----AT-TTATAATGCGG-AA-A----------TCT-CGGTT-T-----TG-TAATT----CG----GTAA---TT--GGT------T---TATTTTAAGGC----A---AAAATCTTG--------ACT-----TT-ATAT----TCGA-AATCTTGTTATTC-------C-A-----------T---ATGCGA-AA--ATCTTG----A-TCT---CT-------ATTCGA--TATTT-TTTTTA--ATT-TA-A-----TA--TGCAGAGATTTTG--------ATT--CAAATGCGATAAA-TTCTTT------GATTTA--TATTTG-ATG------ATT---TTGA-AT-AATTAT-----------ACTTTGATA-A-TCTTTGTT----A-TTT-ATT-T-T--T-CGATAA-TCTTGATATTAATATTCAACTAA-C-CGTG-TGTCT---ATTTAC--------ATGTATAT-T-CAATTG--ATTTTATAT---------TCGATA------CC--------ATTAATTT-TTGTTAATTTT---AT------AATT------CGATAA-------------AT-T-TAA-TAC-TCGATA-A-CCTT--TGA--ATATCAATATGCGAt
gi|5 : T--AAAACACTG-TATTA-TTAT-A-TAA------------ATC----TTG----AT-TTAT-ATGCAA-AA-A----------TCT-TGA-T-T-----TA-T-ATT----TG----ATAG-TTTT--A--------TCAATATTCATAAAC----G---AAAATCATA--------A-T-----TT-GTAT----TC---AATATAAGC-TTG--A--TAT-A--------GA-C---ATGC---AA--ATTTTG----A-------------------------A--A-A---------T-T--A-----TA--TTCGACAATCTCA------ATGTCTATATATGTGA-AAA-T--TTTTATATATGTTTA--TATTCA-ATA------ATC---TTGATAT-ATTTCTATTTG-ATATCATTTTGCTATA-T-ACTTGCAAAAATTTTGATTGG-T-ATGTGATAA---------TT-AAATGCAA-TAA-T-CATGA
gi|5 : aaaTT---TGGATTGATTTTAGAAAATTTTTGATTTATAT-TTGATT------A-TCTTGT-TA-TTTATATTCGGC-A-ATCT---------TCATGA-TT-ATT-------GCATTTAA----------TTATCA--CATACCAAT--C-A--AAATTTT--TG-----CAAG---TATA--TAG--CAAAATGAT-ATCAAATAGAAATATATCAAGA-TT-ATTGAAT--ATAAA--CA-----T-AT--ATAA---------A--AAT-----TT--TCACATATATAGACATTGAGATT-GTCG-----AATATAATTTT--CAAAATTT---G---------CATGTCT--------A----TATC--------AAGC-TT---ATATTGAATACAA-------ATTATGATTTTC-GTTTATGAATATTGATagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttACCAAGG-TTTATT-------GAATATAAATC-AA-GC-GTTTTG--CACATGAATA-CTA--AGATT---------ATCGAA---TATAGAT----TTAGAT--TTATTGAATG----TACATCAAAA-TTCGTTGAAT--ATGCA-TCAAG-ATTTATC-GTAC---------AGAAATAAAAGTTAATCGA--ACATAAATA--AAGATTTATCA-----AATATAA--AT--CGAGATTT-Ttt
gi|6 : TTTT-TGTGCGAAAATTCTT---TTG---TAGGTTCGATAAATCTAGATTTAC-CGGTG-TATATTCGA-TCGCATATAAATTAGAGTTTGCCA-A---GTA--TATATCAAGAGCT-ATA-------AAATGTACATC-AATAT-TTCTTA--AATATAAA-A---A--AGATTT--------ATCAAA---TATAAA-AA--T----------TCAAA-ACATAGAAACCAAGGTTT-ATTGAAT--ATAAA-TCAAG-------C-G-----------------------TT--TTGC--ACATGAATACTAAGATT-ATCG-----AATATAG--AT--TTAGATTTATTGAATGTACATCA-------------A----AATT-----------CGTTG-AATA-T--GC-----------ATCAAGATTTATCGTACAGAAATttctatgttttgaatttttatatttgataaatcttttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgatcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaactttt-AA-A----------TCG-TGA-TGTACCAGTA-T-ATT----CA----CTAAATCTT--GATTACCAGTA--TATTCAT--GG----G---AAAATCTTTT-------A-T-----TA-ATGT----TCGATAATCTTG-TAATC-----TA--------------T---ATAC-AT-----TCTTG----A-T-TTTCAT-------ATGCGA--AA--A-ATCTGG--ATT-T--A-----TA--TTCAATAATCTTG------TTGTT--TATATGCAA-AGAGT--TTT------GGTTTA--CATAAG-ATA------ACCGTATTG--ATTATATATGTGCG-A-A-TAGTTTGATA-AAT-CTTG--------TT--ATC-TAT-ATGCAAAAA-TGTTGAG-TT-ATACTCCA-TAA-T-CTTG-----------TTACT-------G---A-AA-TGC--GAA--A-TATATAT---------TCGACAATCTTGTTTCATTTTTATTTATAT-atc
gi|8 : tgatatacctgtatattcactCATGACGTGT--AAAATGATG-CAATG-TTAC-A-CAA------------ATC----TTG----AT-TTAT-ATGCAA-AA-AAAAATAAAAATCT-TGA-T-C-----TG-T-ATTTTCTCGTTCCATA-----T--A--------T---TTTTTATATGCCTTTG---AAA---TTG--------A-AAGCCACT-GTAT----TC-----TCTGTGTGTTC--T--TG-----------GT-TTCTAACCAATAATCATGT-G----A-C-CC--AT-------ATGTGG---A--A-ATCTTC--ATT-A--G-----TA--TTCGATAATTTGG------TTATTT-CTTCAGTAA-AAA-T--CTT------GTTTTA--T-TTCG-ATA------ATC---TTT--AT-ATCTATGTGCG-A-A-AATCTTGATc
gi|8 : gggtaCA--AAAATAAGTA-A-A--AAATTTCACTG--TCACGGAGTTTATGAATAAATCAAGAT--T-TTCG--CACATAGATATAAAGA-TT-ATCGAA---ATAAA-ACAAG-ATT-TT---TAC---------T--GA------------------AGAAATAACCAAATT-ATCG-----AATACTA--AT--GAAGATTT-CCA---------CA-------------ttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccataATGGCGTGT--AAAAAGTTG-CAGTG-TTGT-A-CAG------------ATG----TTG----AT-TTAT-ATGCAA-AA-A----------TAT-TCA-T-C-----TG-T-ATT----CG----ATAA-TTTT--A--------T---CGTTTATATGC----G---AAAACTTCGATAAAGTTA-T-----CT-ATGT----GCCAAAATATT--TATTT--A--TAC-ATCAATAATAT-C---GTGTGTAAA--AGGTTGCAATA-T-T---ATATAAATCATTCGA--TA--ATATTTTA--ATTAT--A-----CAATTTTGATAATCTTG------CTATG--TATATGCAA-AAA-T--ATT------TATTTA--TATCTGAAAA------ATC---TAG--AT-A--GATATTCGAATA-CAcg
Alignments
lowQualScore : 22222222222222222222222222222222222 1111111111 22222222222222222222 11111111 66666666666666666666666666666666666666666666666666666666666 1111111 111111 111111 11 222222 55555555555555555555555 222 555555555555555555555555555 1 33333333 22222222 3333333333333333 11 3333 11 11 5555555555555 1 666666666666666 1 3333333 1 1111 3333333 1 11 1 111 3333333333333 111 111 111 22 11 44444444444 1111 2 3333 1 4444444444 222222222 11 55555555555555555555 1 222 2222222222 11 8888888888888888888888888888888888888888888888888888888888 22222222 222 11111 1111111 444444444444 111 222222222222 11 111 11 555555555555555555555555 11111 777777777777777777777777777777777777777777777 11 2222222
lowQualScore : 2 2 2 2 66666666666666666666666666666666666 2 2 2 0000000000 2 33 2 2 66666 2 6666666666 55 44444444444444444444 1 22222222 33 33 2 66666 444 8888 1 22222222222222222222222222222222222222222222222222222222222 55 888 44 3 2 33 0 3 88 55 6666666 99 0 4 4 66 222222 1 66 4 222222 4 777 00 555 0 1 111111 1 5 5 5 11111111111111111111111 2 3 999 5 5 0 99999 5 5 000000000000000000000000000 3 99 99 6 3 3 6 88888888 1 6 99999999 1 3 1 8888888888888888 8 8 3 66 1 0 6666 22 0 33 5555555555555 55 1 0 7 3 3 1 222222222222222 0 3 0 2222222 5 0 22 3333 2222222 0 5 33 0 000 5 3333333333333 444 999 1 444 33 11 0 99 00000000000 11 3333 0 3 1111 3 0 4444444444 000000000 9 6 88 66666666666666666666 8 8 6 8 8 555 7 3 3 88 66 55 4444444444 5 6 11 99 1 0 8888888888888888888888888888888888888888888888888888888888 3 8 3 77777777 0 222 1 1 66666 7 8888888 777777777777 444 6 3 222222222222 0 3 11 1 1 11 1 111 44 3 777777777777777777777777 4 33 8888 4 1 44444 77 77 888888888888888888888888888888888888888888888 5 0 11 0 6666666 1 1 8 1 1
lowQualScore : . . . . ................................... . . . .......... . .. . . ..... . .......... .. .................... . ........ .. .. . ..... ... .... . ........................................................... .. ... .. . . .. . . .. .. ....... .. . . . .. ...... . .. . ...... . ... .. ... . . ...... . . . . ....................... . . ... . . . ..... . . ........................... . .. .. . . . . ........ . . ........ . . . ................ . . . .. . . .... .. . .. ............. .. . . . . . . ............... . . . ....... . . .. .... ....... . . .. . ... . ............. ... ... . ... .. .. . .. ........... .. .... . . .... . . .......... ......... . . .. .................... . . . . . ... . . . .. .. .. .......... . . .. .. . . .......................................................... . . . ........ . ... . . ..... . ....... ............ ... . . ............ . . .. . . .. . ... .. . ........................ . .. .... . . ..... .. .. ............................................. . . .. . ....... . . . . .
lowQualScore : 2 9 9 9 44444444444444444444444444444444444 9 9 5 9999999999 5 44 5 5 22222 4 9999999999 99 11111111111111111111 7 11111111 77 11 7 77777 333 3333 7 55555555555555555555555555555555555555555555555555555555555 99 888 66 3 2 00 7 6 66 00 4444444 55 1 4 4 11 888888 0 11 4 888888 4 888 66 111 9 3 555555 0 7 7 7 44444444444444444444444 5 5 888 7 7 7 77777 7 7 777777777777777777777777777 3 22 22 7 5 5 7 33333333 0 7 88888888 0 3 0 2222222222222222 0 0 2 44 0 8 8888 00 2 88 5555555555555 88 0 0 0 2 2 0 000000000000000 2 0 5 5555555 8 0 00 5555 5555555 0 8 88 0 555 8 5555555555555 000 666 0 000 44 00 8 44 00000000000 22 4444 4 2 6666 8 6 8888888888 777777777 8 7 33 99999999999999999999 0 0 0 0 0 000 0 2 2 88 88 88 8888888888 0 0 00 22 0 8 8888888888888888888888888888888888888888888888888888888888 8 0 2 00000000 8 222 0 0 33333 5 7777777 666666666666 000 0 8 888888888888 8 8 88 0 0 88 4 888 00 2 444444444444444444444444 9 11 7777 0 0 33333 99 99 999999999999999999999999999999999999999999999 0 8 00 8 0000000 0 0 0 0 0
consensus : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTG--------------------AT-TTAT-ATGCGAAA-A----------TCT-TG--A-T-T-----TAT-ATT----CG----ATAA-TCTT-------G--------T---TATTCATATGC----G---A--AAATCTTG-A-T-----TT-ATAT----TCGATAATA---TCGN---TA-----TT-CATACA-T-TATG--CGATAA--ATCTTGA-T-T---ATATTCGA--TA--A-ATCTTGATT-T--ATA--TTCGATAATCTTG------NTATT--CATATGCGA-AAA-T--CTT------GNTTTA--TATTCG-ATA------A-TC---TTG--AT-ATTTATATGCG-ATA-NATTTTGATA-A-T-TTTGGTACAA--TTTG-ATT-T-T-ATGCGATAA-T-TTGAT-TT-ATATGC--GA-TAA-T-CTTG-TTTN-T-ATNTAC--------G----ATAA-TC--TTG--A-TTTATATTCGATAATCTTGTT--------ATTTATAT-TCGATAATCTTGT------TATTCATATGCGATAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGATTAATATATATATGCGAA--T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAA--CATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGAT----AAATCTTGATT--CATATTCGAT-AATCT-ATTT---ATATT-CGAT-A-T-CTTGTT-ATTTATATTCGATAACT-TATCGTTATTTA-TATTCGATAACTCTT---TCGATCNATATTCGATA--AATTTTGATTTATAC--TG-TA------A-TCGCGTATAANTTA-A---TTCTG-CA-ATNTGNATA--TATCAAGA-TTATCGA-------ATATAAATCAA-ATTTNTCG----AATATAAATA-CA--AGATTTT--TG--A---TCGAA---TATAAATAA--CAAGAT--TATCGAATACATANATANCAAGA-TTATCGAAT--ATAAA-TCAAG-ATTATC-GTAC---------C--GATTTTCGC--ATATAGATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ATACAA-------ATCNTGATTTAT-ATGCGAAAATCTTGATTTNTATTCGATAATCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTG--------------------AT-TTAT-ATGCGAAA-A----------TCT-TG--A-T-T-----TAT-ATT----CG----ATAA-TCTT-------G--------T---TATTCATATGC----G---A--AAATCTTG-A-T-----TT-ATAT----TCGATAATA---TNGN---TA-----TT-CATACA-T-TATG--CGATAA--ATNTTGA-T-T---ATATTCGA--TA--A-ATCTTGATT-T--ATA--TTCGATAATCTTG------NTATT--CATATGCGA-AAA-T--CTT------GNTTTA--TATTCG-ATA------A-TC---TTG--AT-ATTTATATGCG-ATA-CATNTTGATA-A-T-TTTGGTACAA--TTNG-ATT-T-T-ATGCGATAA-T-TTGAT-TT-ATATGC--GA-TAA-T-CTTG-TTTN-T-ATNTAC--------G----ATAA-TC--TTG--A-TTTATATTCGATAATCTTGTT--------ATTNATAT-TCGATAATCTTGT------TATTCANATGCGANAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGATTAATATATATATGCGAA-AT-TTGTTATGTATATT--CGGTAATCTTGTT----G--AAANATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCTATGACCTTGCT-------ATTTATATGCGA-AAATTNNGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAA--CATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGAT----AAATCTTGATT--CATATTCGAT-AATCTTATTT---ATATT-CGAT-A-T-CTTGTT-ATCTATATTCGATAA---TATTGTTATTTA-TATTCGATAATTCTT---TCGATCNATATTCGATA--AATTTTGATTTATACGNTG-TA------A-TCGCGTATAANTTA-A---TTCTG-CA-ATNTGTATA--TATCAAGA-TTATCGN-------ATATAAATCAA-ATTTNTCG----AATATNAATA-CA--AGATTTT--TG--A---TCGAA---TATAAATAA--CAAGAT--TATCGAATACATANATANCAAGA-TTATCGAAT--ATAAA-TCAAG-ATTATC-GTAC---------N--AATTTTCGC--ACATAGATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCG---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCNTGATTTNT-GTGCAAAAATCTTGATTTNTATTCGATANTCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAA-A-CGA-------ATC--TTG--------------------AT-TTAT-ATGCGAAA-A----------TCT-TT--A-T-T-----TAT-ATT----TG----ATAA-ACTT-------G--------T---TATTCATTTGC----G---A--AAATCTTG-A-T-----TC-ATAT----TCAATAATA---TGAA---TA-----TT-TATACAGTGTATG--CGATAA--ATGTTGA-T-T---ATAAGCGA---A--A-ATCTTGATT-T--ATA--TTTGATAATCTTG------TTATT--CATTTGCAA-AAA-T--CTT------GTTTTA--TATTCA-ATA------A-TA---TGG--AT-ATTTATATGCG-ATA-AATGTTGATA-A-T-TCCGGTACAAA-TTAG-ATT-T-TTGTGCGATAA-TCTTGAT-TT-TTGTGC--GA-TGA-T-CTTGATTTT-T-CTTTAC--------G----ATGA-TC--TTG--A-TTTATAATTGATGTTCTTTTT--------ATTTATAT-TCAATAATCTTGT------TATCTATATTCGATGATCTTGTTACATGTAT-A-TA-TATTTGATG-A-TCTTAACTAATATATATATTCTAAGATCTTGTTATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GATGA-TCTTGTTAT--ACAT-----------------ATTCGATGANNNNNNN-------NNNNNNNNNNNN-NNNNNNNNNNNNNNN-NN-NNNN-------NN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAA--AAATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATA-AT-CATATTCGATCGATAATCTT----G---ATATTTATATGCGAT----AAATCTTGATT--TATATTTAATGAATCTTATTTCTTATGTT-TGAT-A-TTCCTGTT-ATTTATGATCGATAA---TATTGTTATTCA-TATTTGATAAC-CTT---CCAATCTGTATTCGATA--AATGTTGATCTATACACTG-TA------AATTGCATATAATTTT-T---TCCTG-CATACTTATATACATATCAAGA-TTATCAT-------ATATAAATCAAGATTTATCG----AATATTAATAGCA--AGATTAT--TG--AATATCAAA---TATAAATAA--CAAGAT--TATCAAATACATACATAGCAAGA-TTATGGAAT--GCAAA-TCAAG-ATGATC-GCAT---------TTTAATTTTTGC--TCATGAATATCAAGATTATTG-----AATATGA--AC--CAAGGTTT-TCA---------CA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT--------------TT--TTG--------------------AT-TTAT-A--CGATATA----------TATATG--A-T-----------ATT----CT----TCAA-TCTT-------G--------A---TGTTCATATGA----G---A--AAATCTTG-A-T-----TTAATATATAATCGATAATA---TGGT---TA-----TT-CAT----T-TAC---CAAAAA--AAA--AA-T-A---ATA---AA--TA--A-A---------T--AAA--TTCGATGATCTTGTTACATGTATT--CATATGCGA-AAA-T--CTT------AC---AGCTGTTCA-ATATATTACA-TC---TTG-----ATTGGTATGCG-A
gi|11 : CAAG-ATTATC-GAAT---------G--GAGAT--GC--ATATAGATAACATGATTATCG-----AATACAA--AA--CAATATTT-TCC---------CATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTAT-A-TAATAATTATATC--CTC--------------------AT-GTAT-ATGCGAAA-A----------TCT-TG--A-T-T-----TTT-ATT----CG----ATAT-TCTT-------G--------T---C---------------------AAATCTTC-A-A-----TC-ATAT----TCAATAATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGT-A-CAA-------A-C--ATC--------------------ATCCCAT-GTGCGATA-A----------TCT-TG--A-T-T-----TAT-ATC----CA----ATAA-TCTT-------G--------A---TATTTCTATGC----A---A--AAACTTTG-A-T-----TT-ATAT----TTGATAACC---TTGA---CA-----TT-CA---A-T---TG--C-ATAT--TCTTTGATT-T---GTAGTCCATTTA--A-ATGTTGA-T-T--GTA--ACCGATAATCTTT------ATATT--Cc
gi|13 : ct-------TGTA---GTCGATAATCTTG-G-TATTTA---TA--TGCGAATTTATTT---TTCATAT-TCG---A-CT--AGTAATCTTGA-A-AT--ATATTTG-CC-A-AATTTT----G-----ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACC------------TT-CGAT-ATT-TTTGTT-ATCTATATTCGATAA---T
gi|14 : AT-ATT-----G----ATAA-TCTT-------A--------T---TATTTATATGC----ATGCA--AAATCTTA-A-T-----TC-ATAT----TTGATAA-A---TC------------CT-CATACA---TAT----GGTAA--ATCTTGA-TGT---ATATTCGA--TC--A-ATTTTGATG-TCAATA--TT
gi|15 : GTGTAAGACGTTACAATA-TCAT-A-CAT-------GTC--TTG--------------------CT-TCAT-ATGCGAAA-A----------TCT-TG--C-T-T-----TAT-ATT----CG----ATAA-TTTT-------G--------A---TATT--TATGCAA--A---A--AAAAATTG-A-T-----T-------------ATAATA---TAAG---TA-----ta
gi|16 : cacTTTATATGCGAT----AAACCTTGATT--C---TTC----------ATTT---GCATT-CAAT-AAT-CTTGTT-ATCTATATTCAATAA---TATTGTTATTTA-Ta
gi|17 : gtTGAT-TT-ATATGC--GA-TAAAT-CTTG-GTTAAT-ATGTA--------------ATAAATC--TTG--A-TTTGTATTCAATAATTTTGTT--------ATCTATAT-TCGATAATCTTGT------TATTCACATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCT-A-C----------------------------------------------------G-A----------TCT-TA--A-T-T-----TAT-TTC----CG----ATAA-TCTC-------T--------T---TATTCATATGC----G---A--AACTCTTG-C-T-----TT--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCT-A-CCA-------ATT--TTG--------------------AT-TTAC-AGGTGCAA-A----------TCT-TG--A-T-T-----TAT-ATC----------ATAA-AC-C-------G--------T---TATagcga
gi|2 : cgt--------AAACGGTGCAATATT--ATACAA-------ATCTTGATTCAT-ATGCGAAAATCTTGATTTGCATTCGATAATCTattta
gi|2 : cgtgtaATAT-TATACAAA-TC-TTG--ATTCATATG--CGAAAATCTTG-------------ATTTGCATTC-GAT-AATCTTGATGTTTATATGCGAATTTTTTATGTATATTCGGTAATCTTGTTGCAAAAGATTGATTTTCGATAAATCTTGTTATTTA-AA-TTACATTCTATAA-CCTTGCTATTTAT--ATGCGA-AAA--TTTA----------GT----TG-------TATA---TATGACAATCGTG-A-TGTTTA---TA--TGCGAA--CATGTTTATGTGTAT-TCGA------TTG-------TGATGTAT--ATATT---CC-ACAATCTT----GTTTTTTTTTATGTGCGA-----ACATTTTGATT--TATATACGGT-AA-------------ATT-CGATAA-T-CTTGTA-ATTCATATTCGATAACT-TAACG-CATTTA--AATCA--AACT-TT---TCG---CATATT-GATATCAA----GATT------------------A-TCAAATATAAAACA-AGAGTTATG--G-ATATGAATA---ACCAA-A-TTATGGA-------ATATAAATC---ATTTGTAT----AATAT---TG-CA--ACGTTTT--tgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaAATCTTG--------ATTCATATGCGAAAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGAT----GTTTATATGCGAA--T-TTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTAAAT--------------TACATTCTATAACCTTGCT-------ATTTATATGCGA-AAATTTAGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAA--CATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TA-ATTCATATTCG----ATAA-CTT----AAC-GCATTTAAAT----C----AAA-CTT--TTCGCATATT-GAT-Aacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaTGTAAAACGTTGCAATA-TTAT-A-CAA-------A-----------------------------------------------------------TG--A-T-T-----TAT-ATT----CC----ATAA-TTTG-------G--------T---TATTCATATCC----A---T--AACTCTTG-T-T-----TT-ATAT----TTGATAATC---TTGA---TA-----T------CA-A-TATG--CGA-AA--AGTTTGATT-T---AAATGCGT--TA--A-GTtcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataATTT---ATATTACCAT-A-T-TTGGTTTATTCATATCCAATAACTCTAT-GTT--TTAGTATTTGATAATTCTTAGATC-ATCAATATGCGA-A--AAGTTTGATTTA---------A------A-TGCCGTTTAAGTTA-----TTC-G--A-ATATGAAT---TA-CAAGA-TTATCGATTTCGGTATATAAATCAA-AATGTTCGCACCAGTTTAAAAA-AAACAGATTGT--TG--------GAA---TATATACAT--CAA------ATCGAATAC--ACATAACATG---TGTCGCATCCATAAACTCACGAATTGTCAGTACTATACAATAC--AATTTTCGC--ATATA-ATAGCAAGG-TATAGACTGTAATTTAA--ATAAAAAGATTTATCG---------GA-------------A----GAgagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcAATCTTGG-------ATTCAAGTGCAAAAATCTTG--------ATAT-TGGCATTCGATAGA-TTCTGAT-AGTTCATAATTGCGAA--T-TT-TTATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTAAAT--------------TACAGTCTAT-ACCTTGCT-------A-TTATATGCGA-AAATTGTATTGTATAGTACTGAC-------AATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAA--CATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TA-ATTCATATTCGA---ATAA-CTTAAACG---GCATTTAAAT----C----AAA-CTT--TTCGCATATT-GAT-GATCTtcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttGGCGTGTAAAACGTTGCAATA-TCAT-A-TAA-------ATC--TTG--------------------AT-TTAT-ATGAAAGA-A----------TCT-TG--A-T-C-----TAT-ATT----CA----ACAA-TCGT-------A--------A---TATCTATATGC----c
gi|21 : --AATTTTCAC--ATATAGATATCAAGATTATCG-----AATATAA--AT--CAACATTT-TCG---------GA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaaAAAACTTTGCAA-A-CTAT-AACAA-------ATA--T----------------------AT-TTAT-ATGCAAAA-A----------TTT-TG--A-T-T-----CAT-ATT----CA----A--A-TCT--------G--------A---TATTCATATGT----G---A--AAATTTTG-A-T--------------------TAA--------C---TA-----TT-TATA-------TG--CGAAAA--AGTTT---T-N---NNNNNNNN--NN--N-NNNNNNNNN-N--NNN--NNNNNNNNNNNNN------NNNNN--NNNNNNNNN-NNN-N--NNN------NNNNNN--NNNNNN-NNN------N-NN---NNN--NN-NNNNNNNNNNN-NNN-NNNNNNNNTA-G-T-TTTGGT-CAT--TTTGTATTAT-T-ATGCGATAAAG-TTGAT-TA-AAATGC--G--TAA-TTCTTG-TT-A-T-ATATACATGTATTTG----ATAA-TC--TCGCTA-TTCATATTCGATCATCTTGTTGTAT----ATCGATATCTTGATCATTATGTGCAACATATTCATATGCGATAATCTTG--------AT-TATA-CATTCAATA-AATCTTGATTTATATaaa
gi|4 : catgTGTAAAACGTTGCAATA-TTACAA-CAA-------GTCCTTTG--------------------AT-TTATAATGCGGAA-A----------TCT-CG--GTT-T-----TGTAATT----CG----GTAA---TT-------GGT------T---TATTTTAAGGC----A---A--AAATCTTG-ACT-----TT-ATAT----TCGA-AATC---TTGT---TA-----TT-C---CA---TATG--CGA-AA--ATCTTGA-TCT---CTATTCGA--TATTT-TTTTTAATT-TA-ATA--TGCAGAGATTTTG--------ATT--CAAATGCGATAAA-TTCTTT------GATTTA--TATTTG-ATG------A-TT---TTGA-AT-AATTAT-----------ACTTTGATA-A-TCTTTGTT---A--TTT--ATT-T-T--T-CGATAA-TCTTGATATTAATATTC--AACTAA-C-CGTG-TGTC-T-ATTTAC--------ATGT-ATAT-TCAATTG--ATTTTATATTCGATA------CC--------ATTAATTT-TTGTTAATTTTAT------AATT------CGATAAATTTA--------AT-------ACTCGATA-A-CCTT--TGAATATCAATATGCGAt
gi|5 : TAAAACACTGTATTA-TTAT-A-TAA-------ATC--TTG--------------------AT-TTAT-ATGCAAAA-A----------TCT-TG--A-T-T-----TAT-ATT----TG----ATAG-TTTT-------A--------TCAATATTCATAAAC----G---A--AAATCATA-A-T-----TT-GTAT----TCAAT-ATAAGCTTGA---TA-----T---AGAC-----ATG--C---AA--ATTTTGA------------------A--A-A-------T-T--ATA--TTCGACAATCTCA------ATGTCTATATATGTGA-AAA-T--TTTTATATATGTTTA--TATTCA-ATA------A-TC---TTGATAT-ATTTCTATTTG-ATATCATTTTGCTATA-T-ACTTGCAAAAATTTTG-ATTGG-T-ATGTGATAA---------TT-AAATGC--AA-TAA-T-CATG-
gi|5 : aaaTT---TGGATTGATTTTAGAAA--ATTTTTGATTTATAT-TTGATT------A-TCTTGT-TA-TTTATA---TTCGG-CA-ATCT---------TCATGA-TTATTGC-------ATTTAA--------TTATCA----CATACCAAT--CA--AAATTTT--TG-------CAAG---TATA--TAG--CAAAATGATATCAAATAGAAATATATCAAGA-TTATTGAAT--ATAAA--CA-----TAT--ATAA---------A--AATTTTCACATATATAGACATTGAGATTGTCG-----AATATAATTTT--CAAAATTT---G---------CATGTCT--------A----TATC--------AAGC-TT---ATATTGAATACAA-------ATTATGATTTTC-GTTTATGAATATTGATaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttAAA-A----------TCT-CG--A-T-T-----TAT-ATT----TG----ATAAATCTT--------------------TATTTATGTTC----G---ATTAACTTTT--A-T-----TT-CTGT----ACGATAA-A---TC------------TT-GATGCA-T--ATT--CAACGA--ATTTTGA-TGT---ACATTCAA--TA--A-ATCTAAATC-T--ATA--TTCGATAATCTTA------GTATT--CATGTGCAA-AAC-G--CTT------GATTTA--TATTCA-ATA------AACC---TTG--GT---TTCTATG---------TTTTGA---A-T-TTT--TATA---TTTG-AT-----------A-AA-T-CTTTT-TT-ATATTTAAGA--AA-T-ATTG--------ATGTAC--------ATTTTATAGCTC--TTG--A-TATATACTTGGCAAACTC-TA--------ATTTATAT-GCGATtt
gi|6 : TTTT-TGTGCGAAAATTCTT---TTG---TAGGTTCGATA--AATCTAGATTTAC-CGGTG-TATATTCGA-TCGCATATAAATTAGA---GTTTGCCA-A---GTATA--TATCAAGAGCTATAAA-------ATGTACATCAATATTTCTTA----AATATAAA-A--A--AGATTT-------A---TCAAA---TATAAA-AA--T---------TCAAA-ACATAGAAACCAAGGTTTATTGAAT--ATAAA-TCAAG------C-G------------------TTTTGC--ACATGAATACTAAGATTATCG-----AATATAG--AT--TTAGATTTATTGAATGTACATCA-------------A----AATT-----------CGTTG-AATA-T--GC-----------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttAA-A----------TCG-TG--A-TGTACCAGTAT-ATT----CA----CTAAATCTT-------GATTACCAGTA--TATTCAT--GG----G---A--AAATCTTTTA-T-----TA-ATGT----TCGATAATC---TTGT---AA-----TC-TATATA-C---------AT-----TCTTGA-T-TTTCATATGCGA--AA--A-ATCTGGATT-T--ATA--TTCAATAATCTTG------TTGTT--TATATGCAA-AGAGT--TTT------GGTTTA--CATAAG-ATA------A-CCGTATTG--ATTATATATGTGCG-A-A-TAGTTTGATA-AAT-CTTG--------TT---ATC-TAT-ATGCAAAAA-TGTTGAG-TT-ATACTC--CA-TAA-T-CTTG-TTAC-TGAAATGC--------G----A-AA-T--------A-T--ATATTCGACAATCTTGTTTCATTTTTATTTATAT-atc
gi|8 : tgatatacctgtatattcactCATGACGTGTAAAATGATGCAATG-TTAC-A-CAA-------ATC--TTG--------------------AT-TTAT-ATGCAAAA-AAAAATAAAAATCT-TG--A-T-C-----TGT-ATTTTCTCGTTCCATA-----T-------A--------T---TTTTTATATGCCTTTG---A--AA---TTG-A-AAGCCACT-GTAT----TC-----TC---TGTG---TG-----TT-CTTGGT-T-TCTAACCAATAATCATGT-GA-C-CC--ATATGTGG---A--A-ATCTTCATT-A--GTA--TTCGATAATTTGG------TTATTT-CTTCAGTAA-AAA-T--CTT------GTTTTA--T-TTCG-ATA------A-TC---TTT--AT-ATCTATGTGCG-A-A-AATCTTGATc
gi|8 : gggtaCA----AAAATAAGTA-AA--AAATTTCACTGTCA----CGGAGTTTATGAATAAATCAAGAT--TTTCG--CACATAGATATAAAGA-TTATCGAA---ATAAA-ACAAG-ATTTT---TAC---------T--GA-----------AGAAATAACCAAATTATCG-----AATACTA--AT--GAAGATTT-CCA---------CA-------------ttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccataATGGCGTGTAAAAAGTTGCAGTG-TTGT-A-CAG-------ATG--TTGATTTATATGCAAAAATATTCAT-CTGT-ATTCGATA-A----------TTT-TATCG-T-T-----TAT-ATG----CG----AAAA--CTTCGATAAAG--------T---TATCTATGTGC----C---A--AAATATTT-A-T-----TT-ATACA---TCAATAATA---TCGTGTGTAAAAGGTTGCA-ATA-T-TAT-----ATAA--ATC-------------ATTCGA--TA--ATATTTTAATTAT--ACAATTTTGATAATCTTG------CTATG--TATATGCAA-AAA-T--ATT------TATTTA--TATCTGAAAA------A-TC---TAG--AT-A--GATATTCGAATA-CACA--AATG-A-T-TATAGTcg
Alignments
lowQualScore : 1111111111 1111111111111111111111 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 111111111 22222222222 111111 1111 1111 111111 555555555555555555555 111 22222222222222 2222 1111 11 2222222 33333333333333 5555555555555555 11111 555555555555555555 3333333333333333 111 11 22222 11 11 555555555555 1 666666666666666 3333333 1 1111 3333333 1 11 1 111 3333333333333 111 11111 111 111 11 4444444444 1111 2 3333 1 4444444444 1111 11 55555555555555555555 1111 11 222 1111 11 11 1111111 11111111 8888888888888888888888888888888888888888888888888888888 33333333 22222 22222 2222222222 55555 11 444444444 111 111 11 11111 88888888888888888888888 111111 11111 111111 888888888888888888888888888888 11 4444444 11 1
lowQualScore : 2 3 6 9999999 33 2 2 2222222222 2 2 2 2 2 5555 5555 999999 0 1 77777777 2 7777777777777777777777 2 6666 88888 3 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 44 3 44 0 4 888888888 55 0 0 4 4 66 00000000000 66 4 222222 4 3333 0 5 4 2222 1 666666 222222222222222222222 111 44444444444444 666 5555 777777 1111 11 1 3333333 1 77777777777777 6 1 99 1 555 0000000000000000 0 77 44444 111111111111111111 5 1 8888888888888888 000 3 66 1 0 22222 22 0 33 444444444444 55 1 0 7 3 3 1 222222222222222 0 1 7 2222222 5 0 3333 2222222 0 5 33 0 000 5 3333333333333 444 11111 444 444 11 5 99 6666666666 11 3333 0 3 1111 3 0 4444444444 6 4 4444 9 6 88 22222222222222222222 8 8 8888 11 888 0000 33 0 7 44 8888888 11 8 55555555 5555555555555555555555555555555555555555555555555555555 2 0 66666666 3 22222 1 11111 5555555555 0 3 44444 2 00 1 333333333 777 777 1 444 3 1 0 3 33 88888 888 00000000000000000000000 555555 3 1 66666 111111 1 88 333333333333333333333333333333 6 6 88 3333333 1 0 33 2
lowQualScore : . . . ....... .. . . .......... . . . . . .... .... ...... . . ........ . ...................... . .... ..... . ............................................................................................................................................. .. . .. . . ......... .. . . . . .. ........... .. . ...... . .... . . . .... . ...... ..................... ... .............. ... .... ...... .... .. . ....... . .............. . . .. . ... ................ . .. ..... .................. . . ................ ... . .. . . ..... .. . .. ............ .. . . . . . . ............... . . . ....... . . .... ....... . . .. . ... . ............. ... ..... ... ... .. . .. .......... .. .... . . .... . . .......... . . .... . . .. .................... . . .... .. ... .... .. . . .. ....... .. . ........ ....................................................... . . ........ . ..... . ..... .......... . . ..... . .. . ......... ... ... . ... . . . . .. ..... ... ....................... ...... . . ..... ...... . .. .............................. . . .. ....... . . .. .
lowQualScore : 2 1 2 3333333 99 9 9 5555555555 9 9 9 7 7 7777 3333 222222 1 7 66666666 7 9999999999999999999999 9 1111 55555 1 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 66 3 66 7 0 000000000 55 4 3 4 4 11 11111111111 11 4 888888 4 7777 4 1 4 5555 7 444444 777777777777777777777 777 33333333333333 888 7777 666666 6666 66 6 5555555 0 88888888888888 7 8 22 4 444 4444444444444444 8 99 33333 444444444444444444 7 4 2222222222222222 000 2 44 0 8 22222 00 2 88 222222222222 88 0 0 0 2 2 0 000000000000000 2 0 0 5555555 8 0 5555 5555555 0 8 88 0 555 8 5555555555555 000 66666 000 444 00 0 44 0000000000 22 4444 4 2 6666 8 6 8888888888 7 2 2222 8 7 33 22222222222222222222 0 0 2222 00 000 8888 22 7 3 00 2222222 22 8 22222222 2222222222222222222222222222222222222222222222222222222 5 2 00000000 2 88888 0 55555 2222222222 2 5 00000 0 55 2 222222222 555 000 0 888 2 2 2 0 88 00000 666 00000000000000000000000 333333 7 0 77777 555555 0 33 888888888888888888888888888888 7 7 33 3333333 0 8 00 0
consensus : CATGGCGTGTAAAACGTTGCAATA-TTATA-CAA-------ATC--TTGAT-TTATA-TGC----------GA-AA-ATCT-TGATTT-ATA-T----TCG----ATAATCTTG--T---TATTCATATGC----G---A-AAATCTTG--------A-----T-T-----T-ATAT----TC---G-AT-AATN---TCGNTATT--C------A-TACA-T-T-A---------TGCG----ANA------AATCTTG----A-T-TA-T-------A--TTCGA--TAA-----------AT----------CTT--G--ATT--------T--A-TA--TTCGATAA-TCTTG------NTATT--CATATGCGA-AAA-TC--TT------GN---TTTA--TATTCG-ATA------A-TCTTG--A-TATTTATATGCG-ATA-AATNTTG------ATA---AT-TTTGGTA-CAG--T-TT-G-ATT-NT-AT----GC--GA-T-AA--T-TTGAT-TTA-TATGCGA-T--AA-TCTTG-TT-TN-TATNTA-C--------GAT-AA-TCTTG--ATTTATATTCGATAATCTTGTTATT-------------TATATTCGATA--A-----TCTTG----TTA-----------TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATCT-ATTT---ATATT-CGAT-A-T-CTTG--TTATTTATATTCGATAACT-TATCGTTATTTA-TATTCGATAACTCTT---TCGATCNATATTCGATA--AATTTTGATTTATAC--T-TAA-TCG-CGTATAANTTA-A---TTCTGCA-ATNTGAATA--TATCAAGATTATCGN-------ATATAAATCAA-ATTTATCG----AATATNAATA-CA--AGATTNTTG-----CAAATATAAATAACAAA----AT--TATC---GAATACATACATAA--CAAGATTATCGNAT--ATAA--A-TCAAG-ATTATC-G---T---AC---------C--GATTTTCGC--AT--ATAGATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCGCA-------------A----AAAC--------AAACGTTGCAATATT--ATACAA-------ATCNTGATTTATATGCGAAAATCTTGATTT-TATTCGATAATCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTATA-CAA-------ATC--TTGAT-TTATA-TGC----------GA-AA-ATCT-TGATTT-ATA-T----TCG----ATAATCTTG--T---TATTCATATGC----G---A-AAATCTTG--------A-----T-T-----T-ATAT----TC---G-AT-AATA---TCGNTATT--C------A-TACA-T-T-A---------TGCG----ATA------AATCTTG----A-T-TA-T-------A--TTCGA--TAA-----------AT----------CTT--G--ATT--------T--A-TA--TTCGATAA-TCTTG------NTATT--CATATGCGA-AAA-TC--TT------GN---TTTA--TATTCG-ATA------A-TCTTG--A-TATTTATATGCG-ATA-NATTTTG------ATA---AT-TTTGGTA-CAA--T-TT-G-ATT-TT-AT----GC--GA-T-AA--T-TTGAT-TTA-TATGCGA-T--AA-TCTTG-TT-TN-TATNTA-C--------GAT-AA-TCTTG--ATTTATATTCGATAATCTTGTTATT-------------TATATTCGATA--A-----TCTTG----TTA-----------TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATCT-ATTT---ATATT-CGAT-A-T-CTTG--TTATTTATATTCGATAACT-TATCGTTATTTA-TATTCGATAACTCTT---TCGATCNATATTCGATA--AATTTTGATTTATAC--TGTAA-TCG-CGTATAANTTA-A---TTCTGCA-ATNTGNATA--TATCAAGATTATCGA-------ATATAAATCAA-ATTTNTCG----AATATAAATA-CA--AGATTTTTGA---TCGAATATAAATAACAAG----AT--TATC---GAATACATANATAN--CAAGATTATCGAAT--ATAA--A-TCAAG-ATTATC-G---T---AC---------C--GATTTTCGC--AT--ATAGATANCAAGATTATCG-----AATATAA--AT--CAAGATTT-TCGCA-------------A----AAAT--------AAACGTTGCAATATT--ATACAA-------ATCNTGATTTATATGCGAAAATCTTGATTTNTATTCGATAATCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAAA-CGA-------ATC--TTGAT-TTATA-TGC----------GA-AA-ATCT-TTATTT-ATA-T----TTG----ATAAACTTG--T---TATTCATTTGC----G---A-AAATCTTG--------A-----T-T-----C-ATAT----TC---A-AT-AATA---TGAATATT--T------A-TACAGTGT-A---------TGCG----ATA------AATGTTG----A-T-TA-T-------A--AGCGA---AA-----------AT----------CTT--G--ATT--------T--A-TA--TTTGATAA-TCTTG------TTATT--CATTTGCAA-AAA-TC--TT------GT---TTTA--TATTCA-ATA------A-TATGG--A-TATTTATATGCG-ATA-AATGTTG------ATA---AT-TCCGGTA-CAA--A-TTAG-ATT-TTTGT----GC--GA-T-AA--TCTTGAT-TTT-TGTGCGA-T--GA-TCTTGATT-TT-TCTTTA-C--------GAT-GA-TCTTG--ATTTATAATTGATGTTCTTTTTATT-------------TATATTCAATA--A-----TCTTG----TTA-----------TCTAT-ATTCGATGATCTTGTTACATGTAT-A-TA-TATTTGAT-G-ATCTTAACTAATATATATATTCTAAGATC-TTGTTATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GATGA-TCTTGTTAT--ACAT-----------------ATTCGATGANNNNNNN-------NNNNNNNNNNNN-NNNNNNNNNNNNNNN-NN-NNNN-------NN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATA-AT-CATATTCGATCGATAATCTT----G---ATATTTATATGCGATA----AATCTTGATT--TATATTTAATGAATCTTATTTCTTATGTT-TGAT-A-TTCCTG--TTATTTATGATCGATAA---TATTGTTATTCA-TATTTGATAAC-CTT---CCAATCTGTATTCGATA--AATGTTGATCTATACACTGTAAATTG-CATATAATTTT-T---TCCTGCATACTTATATACATATCAAGATTATCAT-------ATATAAATCAAGATTTATCG----AATATTAATAGCA--AGATTATTGAATATCAAATATAAATAACAAG----AT--TATC---AAATACATACATAG--CAAGATTATGGAAT--GCAA--A-TCAAG-ATGATC-G---C---AT---------TTTAATTTTTGC--TC--ATGAATATCAAGATTATTG-----AATATGA--AC--CAAGGTTT-TCACA-------------A----AAAT--------AAACGTTGCAATATT--ACACAA-------ATCTTGATTATTATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT-------------TT--TTGAT-TTATA---C----------GA-TATATATATGAT-----A-T----TCT----TCAATCTTG--A---TGTTCATATGA----G---A-AAATCTTG--------A-----T-T-----TAATATATAATC---G-AT-AATA---TGGTTATT--C------A-T----T-T-A---------C-CA----AAA------AA---------A-A-AA-T-------A--ATAAA--TAA-----------A------------------------------T--A-AA--TTCGATGA-TCTTGTTACATGTATT--CATATGCGA-AAA-TC--TT------AC------AGCTGTTCA-ATATATTACA-TCTTG-----ATTGGTATGCG-A
gi|11 : CAAG-ATTATC-G---A---AT---------G--GAGAT--GC--AT--ATAGATAACATGATTATCG-----AATACAA--AA--CAATATTT-TCCCATATGATTAACAAGA----AAACGGCGTGTAAAATGTCGCAATATT--ATATAATAATTATATCCTCATGTATATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTATA-TAATAATTATATC--CTCAT-GTATA-TGC----------GA-AA-ATCT-TGATTT-TTA-T----TCG----ATATTCTTG--T---C--------------------AAATCTTC--------A-----A-T-----C-ATAT----TC---A-AT-AATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGTA-CAA-------A-C--ATCATCCCATG-TGC----------GA-TA-ATCT-TGATTT-ATA-T----CCA----ATAATCTTG--A---TATTTCTATGC----A---A-AAACTTTG--------A-----T-T-----T-ATAT----TT---G-AT-AACC---TTGACATT--C------A----A-T-------------TGC-----ATA------TTCTTTG----ATT-TG-T-------A--GTCCATTTAA-----------AT----------GTT--G--A-T--------T--G-TA--ACCGATAA-TCTTT------ATATT--Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATAT-TCGA----CT--AGTAATCTTGA-A-AT--ATATTTG-CC-A-AATTTT----G-----ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACC------------TT-CGAT-ATT-TTTG--TTATCTATATTCGATAA
gi|14 : -ATA-T----T-G----ATAATCTTA--T---TATTTATATGC----ATGCA-AAATCTTA--------A-----T-T-----C-ATAT----TT---G-AT-AA-A---TC----CT--C------A-TACA---T-A---------T--G----GTA------AATCTTG----A-TGTA-T-------A--TTCGA--TCA-----------AT----------TTT--G--ATG--------TCAA-TA--TTt
gi|15 : TCTTG--C---T--TCATATGC----G---A-AAATCTTG--------C-----T-T-----T-ATAT----TC---G-AT-AATT---TTGATATT--T------A-TGCA------------------A----AAA------AAAATTG----A-T-TA-T-------A--AT--A--TAA-----------GT----------ta
gi|15 : cactGTGTAAGACGTTACAATA-TCATA-CAT-------GTC--TTGCT-TCATA-TGC----------GA-AA-ATCT-TGCTTT-ATA-T----TCG----ATAATTTTG--A---TATT--TATGC----A---A-AAAcatgtatgatattgtaacgtcttacaca
gi|16 : cactacttatattataatcaattttTTTATATGCGATA----AACCTTGATT--C---TTC----------ATTT---GCATT-CAAT-AAT-CTTG--TTATCTATATTCAATAA---TATTGTTATTTA-Ta
gi|17 : gtTGAT-TTA-TATGCGA-T--AAATCTTG-GT-TAATATGTA-----------AT-AAATCTTG--ATTTGTATTCAATAATTTTGTTATC-------------TATATTCGATA--A-----TCTTG----TTA-----------TTCAC-ATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCTA-C-------------------------------------------G-ATCT-TAATTT-ATT-T----CCG----ATAATCTCT--T---TATTCATATGC----G---A-AACTCTTG--------C-----T-T-----T--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCTA-CCA-------ATT--TTGAT-TTACA-GGT----------GC-AA-ATCT-TGATTT-ATA-T----C------ATAAAC-CG--T---TATagcga
gi|2 : cgtATAT-TATACAAA---TCTTG--ATTCATATG--CGAAAATCTT-------------GATTTGCATTC-GAT-AATCTTGATGTTTATATGCGAATTTTTTATGTATATTCGGTAATCTTGTTGCAAAAGATTGATTTTCGATAAATCTTGTTATTTA-AA-TTACATTCTATAA-CCTTGCTATTTAT--ATGCGA-AAA--TTTA----------GT----TG-------TATA---TATGACAATCGTG-A-TGTTTA---TA--TGCGAAC--ATGTTTATGTGTAT-TCGA------TTG-------TGATGTAT--ATATT---CC-ACAATCTT----GTTTTTTTTTATGTGCGA-A----CATTTTGATT--TATATACGGT-AA-------------ATT-CGATAA-T-CTTG--TAATTCATATTCGATAACT-TAACG-CATTTA--AATCA--AACT-TT---TCG---CATATT-GATATCAA----GATT-----------A-TCA-AATATAAAACA-AGAGTTATG-G-ATATGAATA---ACCAA-ATTATGGA-------ATATAAATC---ATTTGTAT----AATAT---TG-CA--ACGTTTTattta
gi|2 : cgtgtaaaacggtgcaA--A-----TCTTG------A-----------TTCAT-ATGCGAAAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGAT----GTTTATATGCGAA---T-TTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTAAAT--------------TACATTCTATAACCTTGCT-------ATTTATATGCGA-AAATTTAGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TA-ATTCATATTCG----ATAA-CTT----AAC-GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-Aacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaATATTATAC-AATGC-ATTT---ATATTACCAT-A-T--TTGGTTTATTCATATCCAATAACTCTAT-GT--TTTAGTATTTGATAATTCTTAGATC-ATCAATATGCGA-A--AAGTTTGATTTA--------AA-TGC-CGTTTAAGTT--A---TTC-G-A-ATATGAAT---TA-CAAGATTATCGATTTCGGTATATAAATCAA-AATGTTCGCACCAGTTTAAAAA-AAACAGATTGTTG------GAATATATACATCAA----------ATC---GAATAC--ACATAA--CATG--TGTCGCATCCATAA--ACTCACGAATTGTCAG---T---ACTATACAATAC--AATTTTCGC--AT--ATA-ATAGCAAGG-TATAGACTGTAATTTAA--ATAAAAAGATTTATCGGA-------------A----GAtcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaA--A-----TCTTG----G-A-----------TTCAA-GTGCAAAAATCTTG--------ATAT-TGGCATTCGAT-AGATTCTGAT-AGTTCATAATTGCGAA---T-TT-TTATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTAAAT--------------TACAGTCTAT-ACCTTGCT-------A-TTATATGCGA-AAATTGTATTGTATAGTACTGAC-------AATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TA-ATTCATATTCGA---ATAA-CTTAAACG---GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-GATCT-Atcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattctGGCGTGTAAAACGTTGCAATA-TCATA-TAA-------ATC--TTGAT-TTATA-TGA----------AA-GA-ATCT-TGATCT-ATA-T----TCA----ACAATCGTA--A---TATCTATATGC----c
gi|21 : ATTTTCAC--AT--ATAGATATCAAGATTATCG-----AATATAA--AT--CAACATTT-TCGGA-------------AGGCTAAAT--------AAAC
gi|3 : tttgaattaaaAAAACTTTGCAA-A-CTATAACAA-------ATA--T--AT-TTATA-TGC----------AA-AA-ATTT-TGATTC-ATA-T----TCA----A--ATCT-G--A---TATTCATATGT----G---A-AAATTTTG--------A-----T-------------------------T-AA--------CTATT--T------A-TA-----------------TGCG----AAA------AAGTTT-------T-NN-N-------N--NNNNN--NNN-----------NN----------NNN--N--NNN--------N--N-NN--NNNNNNNN-NNNNN------NNNNN--NNNNNNNNN-NNN-NN--NN------NN---NNNN--NNNNNN-NNN------N-NNNNN--N-NNNNNNNNNNNN-NNN-NNNNNNN------NTA---GT-TTTGGT--CAT--T-TT-GTATTATT-AT----GC--GA-TAAA--G-TTGAT-TAA-AATGCG--T--AATTCTTG--T-TA-TATATA-CATGTATTTGAT-AA-TCTCGCTATTCATATTCGATCATCTTGTTG---------------TATA-TCGAT---A-----TCTTGATCATTATGTGCAACATATTCAT-ATGCGATAATCTTG--------AT-TATA-CATTCAATAA-ATCTTGATTTATATaaa
gi|4 : catgTGTAAAACGTTGCAATA-TTACAACAA-------GTCCTTTGAT-TTATAATGC----------GG-AA-ATCT-CGGTTTTGTAAT----TCG----GTAAT--TGGTT---TATTTTAAGGC----A---A-AAATCTTG--------AC----T-T-----T-ATAT----TC---G-A--AATC---TTGTTATT--C----------CA-T---A---------TGCG----A-A------AATCTTG----A-TCTC-T-------A--TTCGA--TAT-----------TT----------TTTTTA--ATT--------T--AATA--TGCAGAGA-TTTTG--------ATT--CAAATGCGATAAA-TTCTTT------GA---TTTA--TATTTG-ATG------A-TTTTG--AATAATTATAC-----------TTTG------ATA---ATCTTTGTTA------T-TT---ATT-TT--T-----C--GA-T-AA--TCTTGATATTAATATTCAACT--AA-CCGTG-TG-TC-TATTTA-C----------------------ATGTATATTCAA-----TTGAT-TT-------------TATATTCGATACCATTAATTTTTG----TTAAT---------TTTATAATTCGATAAATTTA--------AT-------ACTCGAT-A-ACCTT--TGAATATCAATATGCGAt
gi|5 : TAAAACACTGTATTA-TTATA-TAA-------ATC--TTGAT-TTATA-TGC----------AA-AA-ATCT-TGATTT-ATA-T----TTG----ATAGTTTTA--TCAATATTCATAAAC----G---A-AAATCATA--------A-----T-T-----T-GTAT----TC---A-AT--ATAAGCTTGATAT----------A-GAC------A---------TGC-------A------AATTTTG----A-------------------------AA-----------A---------------------T--------T--A-TA--TTCGACAA-TCTCA------ATGTCTATATATGTGA-AAA-TT--TTTATATATG---TTTA--TATTCA-ATA------A-TCTTGATA-TATTTCTATTTG-ATATCATTTTG------CTAT--AT-ACTTGCA-AAAATT-TT-G-ATTGGT-AT----GT--GA-T-AA----------TTA-AATGCAA-T--AA-TCATG-
gi|5 : aaaTT---TGGATTGATTTTAGAAA--ATTTTTGATTTATAT--T-TGA-TTATCTTGTTATTTATA---TTCGGCA-ATCT---------TCATGATTATTGC-------ATTTAA--------TTATCA----CATACCAAT--CA--AAATTTTTG-----CAAGTATA--TAGCAAA----ATGATATC---AAATAGAAATATAT--CAAGATTATTGAAT--ATAA--A--CA-----TAT--A---T---AA---------A--AATTTTCACATAT--ATAGACATTGAGATTGTCG-----AATATAATTTT--CAAAATTT---GCATGTCT--------A----TATC--------AAGC-TT---ATATTGAATACAA-------ATTATGATTTaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatataaatcttgatttatatgcaaaaatcttgatttatatttgatagttttatcaatattcataaacgaAA-------ATC--TCGAT-TTATA-TTT----------GATAA-ATCT-TTATTT-ATG-T----TCG----ATTAACTT---T---TATTTCTGTAC----G---ATAAATCTTG--------A-----T-G-----C-ATAT----TC---A-ACGAATT---TTGATGT-------------ACA-T-T-------------CA----ATA------AATCTAA----A-TCTA-T-------A--TTCGA--TAATCTTAGTATTCATGTGCAAAACGCTT--G--ATT--------T--A-TA--TTCAATAAACCTTG------GT-TT--C-TATG--------TT--TT------GAATTTTTA--TATTTG-ATA------AATCTT-----T-TTTATATTTA-AGA-AATATTG------ATGTACAT-TT---TA-TAGCTC-TT-G-A-T-AT-AT----ACTTGG-C-AAACT-CTAAT-TTA-TATGCGA-TCGAA-------------TATACACC--------GGTAAA-TCTAG--ATTTATtt
gi|6 : a-T-T-G---------TGCG----AAA------ATTCTT-------T-TG-T-------AGGTTCGA--TAA-----------AT----------CTA--G--ATTTACCGGTGT--A-TA--TTCGATcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttatttctgtacgataaatcttgatgcatattcaacgaattttgatgtacattcaataaatctaaatctatattcgataatcttagtattcatgtgcaaaacgcttgatttatattcaataaaccttggtttctatgttttgaatttttatatttgataaatcttttttatatttaagaaatattgatgtacattttatagctcttgatatatacttggcaaactctaatttatatgcgG----ATATACCTG--TA--TATTCAC-T------------AAATCGTG--------A-----TGTACCAGT-ATAT----TC---A-CT-AA-A---TCTTGATTACC------AGTATA-T-TCA---------TGGG----A-A------AATCTTTT---A-T-TAAT-------G--TTCGA--TAA------------T----------CTT--GTAATC--------T--A-TA--T---ACAT-TCTTG------ATTTT--CATATGCGA-AAAATC--TG------GA---TTTA--TATTCA-ATA------A-TCTTG--T-TGTTTATATGCA-AAG-AGTTTTGGTTTACATA---A-----GATAACCG--TATT-G-ATT-AT-ATATGTGC--GAAT-AG--T-TTGAT-----------A----AA-TCTTG-TTATC-TATATG-C--------AAA-AA-TGTTG--AGTTATACTCCATAATCTTGTTACTGAAATGCGAAATATATATTCGACA--A-----TCTTG----T-------------TTCAT-aaaatc
gi|8 : tCATGACGTGTAAAATGATGCAATG-TTACA-CAA-------ATC--TTGAT-TTATA-TGCAAAAAAAAATAA-AA-ATCT-TGATCT-GTA-TTTTCTCGTTCCATA----TA--T---TTTTTATATGCCTTTG---A-AA---TTG--------AAAGCCA-C-----T-GTAT----TCTCTGTGT-GTTC---TTGGT-TT--CTAACCAA-TA-A-T-C-A---------TGTGACCCATATGTGGAAATCTTC----A-T-TAGT-------A--TTCGA--TAA-----------------------TTT--G--G-T--------T--A-T---TTC--------------------TT--CA---GTAA-AAA-TC--TT------GT---TTTA--T-TTCG-ATA------A-TCTTT--A-TATCTATGTGCG-A-A-AATCTTG------ATttttatttatatc
gi|8 : gggtaCAAAAATAAGTAAAAAATTTCAC--TGTCACGGAGTTTATGAATAAATCAAGATTTTCGCAC--ATAGATA-TAAAG-ATTATC-GAAATAAAACA--------A--GATTTTTAC---TGAAGAAATAACCAAATTATCG-----AATACTA--AT--GAAGATTT-CCACA-------------ttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|8 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccataATCTATGTGCGAAAATCTTGATT--TATTC-ATAAACTcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcattagtattcgataatttggttatttcttcagtaaaaatcttgttttatttcgataatctttatATGGCGTGTAAAAAGTTGCAGTG-TTGTA-CAG-------ATG--TTGAT-TTATA-TGC----------AA-AA-ATAT-TCATCT-GTA-T----TCG----ATAATTTTA--T---CGTTTATATGC----G---A-AAACTTCGATAAAGTTA-----T-C-----T-ATGT----GC---C-AA-AATA---T--TTATT--T------A-TACA-T-C-AATAATATCGTGTG----TAA------AAGGTTGCAATA-T-TA-TATAAATCA--TTCGA--TAAT----------AT----------TTT--A--ATTA-------T--A-CAATTTTGATAA-TCTTG------CTATG--TATATGCAA-AAA-TA--TT------TA---TTTA--TATCTGAAAA------A-TCTAG--A-TA--GATATTCGAATA-CAccgtgacagtgaaattttttacttatttttgcg
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111111 1111111111 111111111111111111111111 5555555555555555555555555555555555555555555555555555555555555 1111111 1111111 111111 11 11 111111 111 555555555555555555555555555555555555555 111111 111 2222222 444444444444 1111 44444444444444 33333333 3333333333333333 11 22222 11 11 555555555555 1 666666666666666 3333333 1 1111 3333333 1 11 1 111 2222222222222 11111 22222 111 111 111 77777777777777777777777 11 3333 1 3333333333 1111111111 11111 111 555555555555555555 22 11111 22222222222 11111 2222222222 11 111111111111111111111111111111111111111111111111111111111111111 11 1111 22222222 22222 22222222 1111111 111 1 222222 22222222222222222 1111 1 1 1 1 1111 1 999999999999999999999999999 11111 111 1 7777777777777777777777777777777777 111 1 33333333333 1 2 2
lowQualScore : 2 3 3 3 0 0000000 44 3 3 3 3333333333 3 3 2 7777777777 2 0 6666 0 2 88888888 33 777777777777777777777777 6666 77777 8888888888888888888888888888888888888888888888888888888888888 3 1111111 1 555 55 33 0 666 4 99 55 0 8888888 4 0 5 7777 1 66 0 5 5 444444 22 1 0 00 1 999999 777 1 111111111111111111111111111111111111111 777777 2 666 333 6666666 1 444444444444 6 99 6 99 6 6 7777 55555555555555 8 00000000 0 1 8888888888888888 8 8 3 66 1 0 22222 22 0 33 444444444444 55 1 0 7 3 3 1 222222222222222 0 1 7 2222222 5 0 3333 2222222 0 5 33 0 000 5 99 7777777777777 66666 1 11111 111 777 000 2 88 44444444444444444444444 9 3 7 6 66 1 2222 1 1 7777777777 0 5555555555 7 22222 999 99999 222222222222222222 6 6 22 6 33333 88888888888 0 6 11 11111 9999999999 3 8 6 11 99 1 333333333333333333333333333333333333333333333333333333333333333 1 33 6666 8 77777777 33333 33333333 8888888 666 0 333333 44444444444444444 5555 0 0 3 0 2 1 5555 0 222222222222222222222222222 3 1 66666 111 3 0000000000000000000000000000000000 444 2 0 2 5 77777777777 1 0 3 0 0 0 4
lowQualScore : . . . . . ....... .. . . . .......... . . . .......... . . .... . . ........ .. ........................ .... ..... ............................................................. . ....... . ... .. .. . ... . .. .. . ....... . . . .... . .. . . . ...... .. . . .. . ...... ... . ....................................... ...... . ... ... ....... . ............ . .. . .. . . .... .............. . ........ . . ................ . . . .. . . ..... .. . .. ............ .. . . . . . . ............... . . . ....... . . .... ....... . . .. . ... . .. ............. ..... . ..... ... ... ... . .. ....................... . . . . .. . .... . . .......... . .......... . ..... ... ..... .................. . . .. . ..... ........... . . .. ..... .......... . . . .. .. . ............................................................... . .. .... . ........ ..... ........ ....... ... . ...... ................. .... . . . . . . .... . ........................... . . ..... ... . .................................. ... . . . . ........... . . . . . . .
lowQualScore : 2 3 3 3 3 8888888 66 3 3 1 5555555555 1 1 9 7777777777 7 4 0000 6 5 88888888 99 000000000000000000000000 5555 33333 5555555555555555555555555555555555555555555555555555555555555 6 8888888 2 888 00 77 9 444 0 55 55 8 1111111 4 4 0 1111 0 99 2 0 0 444444 88 6 2 88 0 222222 444 4 444444444444444444444444444444444444444 000000 5 888 555 3333333 0 555555555555 7 22 7 22 7 0 0000 00000000000000 0 00000000 3 4 2222222222222222 0 0 2 44 0 8 22222 00 2 88 222222222222 88 0 0 0 2 2 0 000000000000000 2 0 0 5555555 8 0 5555 5555555 0 8 88 0 555 8 44 1111111111111 77777 0 55555 777 222 222 5 88 33333333333333333333333 8 2 3 7 55 0 5555 7 3 7777777777 6 9999999999 1 11111 777 55555 777777777777777777 7 7 55 7 77777 55555555555 8 7 88 00000 6666666666 2 0 0 00 22 0 888888888888888888888888888888888888888888888888888888888888888 0 88 0000 0 00000000 66666 22222222 2222222 000 8 222222 55555555555555555 8888 8 0 5 0 8 0 5555 0 000000000000000000000000000 7 0 77777 333 3 5555555555555555555555555555555555 000 5 8 5 5 55555555555 0 2 3 7 0 0 0
consensus : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TGA-TTTAT-ATT----CG----AT-AATCTTG--T-TATTCATATGC----G---A--AAATCTTG--------A-T-----T-----T-ATAT----TC---G-ATAA-TNTCGNTATTC------A-TACA-T-T-A---------TGCGANAAATNTTG----A-T-TA-T-------ATTCGA--TA--A-ATCTTG--ATT-T--ATA--TTCGATAATCTTG------NTATT-CATATGCGA-AAA-T--CTTGNTTTA--TATTCG-AT-A------ATCTTG-ATATTTATATGCGATGAATTTTG------ATAAT-TTTGGTA-CANT-TT-G-ATTTTTAT----GC----GA-TAA-TCTTGAT-TT-ATATGCGA-TAA-T-CTTG-TT-TN-TATNTAC--------G---ATAA-TC--T-TG--A-TTTATATTCGATAATCTTGTT----ATT-------------TATAT-TCGATAATCTTGT------TATTCATATGCGATAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-TCGATAA-CTT----------------CGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GTATTTATATGCGATA----AATCTTGA---TT--CATATTCGAT-AATCT--AT---T-T---ATATT-CGAT-A--T-CTTGT---T-ATTTATATTCGATAA-CT-T-ATCGTTATTTA-TATTCGATAACTC-TT---TCGATCTATATTCG-ATA--AATTTTGATT------T-A--------TA-----T-AATCGCATATAAN--TTA-A---TTCTGC--A-----ATATGAATATATCAAGA-TTATCGA-------ATATAAATC--AA-ATTTNTCN----AATATNAATA-CAA--GATTNTTG-----CAAATATAAATAACAAAATT-TCGAATACATACGTAACA-AGNTT-ATCGAAT--ATAAA-TCAAGA-TTATC-G-AT---------C--GATTTTCGCACATAGATANCAAGATTATCG-----AATATAAAN--CAAGATTT-TCGN--A-------------A----AAAC--------AAA---CGTCGCAATATTATACGA-------ATCCTGATTTAT-ATGCGAAAATCTTGATTTTATATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TGA-TTTAT-ATT----CG----AT-AATCTTG--T-TATTCATATGC----G---A--AAATCTTG--------A-T-----T-----T-ATAT----TC---G-ATAA-TNTCGNTATTC------A-TACA-T-T-A---------TGCGANAAATCTTG----A-T-TA-T-------ATTCGA--TA--A-ATCTTG--ATT-T--ATA--TTCGATAATCTTG------NTATT-CATATGCGA-AAA-T--CTTGNTTTA--TATTCG-AT-A------ATCTTG-ATATTTATATGCGATAAATNTTG------ATAAT-TTTGGTA-CAGT-TT-G-ATTNT-AT----GC----GA-TAA-T-TTGAT-TT-ATATGCGA-TAA-T-CTTG-TT-TN-TATNTAC--------G---ATAA-TC--T-TG--A-TTTATATTCGATAATCTTGTT----ATT-------------TATAT-TCGATAATCTTGT------TATTCATATGCGATAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTT----------------CGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGATA----AATCTTGA---TT--CATATTCGAT-AATCT--AT---T-T---ATATT-CGAT-A--T-CTTGT---T-ATTTATATTCGATAA-CT-T-ATCGTTATTTA-TATTCGATAACTC-TT---TCGATCNATATTCG-ATA--AATTTTGATT------T-A--------TAC----TTAATCGCGTATAAN--TTA-A---TTCTGC--A-----ATNTGAATATATCAAGA-TTATCGN-------ATATAAATC--AA-ATTTATCG----AATATNAATA-CAA--GATTNTTG-----CAAATATAAATAACAAAATTATCGAATACATACATAACA-AGATT-ATCGNAT--ATAAA-TCAAGA-TTATC-GTAC---------C--GATTTTCGCATATAGATANCAAGATTATCG-----AATATAAAT--CAAGATTT-TCGC--A-------------A----AAAC--------AAA---CGTTGCAATATTATACAA-------ATCNTGATTTAT-ATGCGAAAATCTTGA-TTT-TATTCGATAATCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAA-A-CGA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TTA-TTTAT-ATT----TG----AT-AAACTTG--T-TATTCATTTGC----G---A--AAATCTTG--------A-T-----T-----C-ATAT----TC---A-ATAA-TATGAATATTT------A-TACAGTGT-A---------TGCGATAAATGTTG----A-T-TA-T-------AAGCGA---A--A-ATCTTG--ATT-T--ATA--TTTGATAATCTTG------TTATT-CATTTGCAA-AAA-T--CTTGTTTTA--TATTCA-AT-A------ATATGG-ATATTTATATGCGATAAATGTTG------ATAAT-TCCGGTA-CAAA-TTAG-ATTTTTGT----GC----GA-TAA-TCTTGAT-TT-TTGTGCGA-TGA-T-CTTGATT-TT-TCTTTAC--------G---ATGA-TC--T-TG--A-TTTATAATTGATGTTCTTTTT----ATT-------------TATAT-TCAATAATCTTGT------TATCTATATTCGATGATCTTGTTACATGTAT-A-TA-TATTTGATG-A-TCTTAACTAATATATATATTCTAAGATC-TTGTTATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GATGA-TCTTGTTAT--ACAT-----------------ATTCGATGANNNNNNN-------NNNNNNNNNNNN-NNNNNNNNNNNNNNN-NN-NNNN-------NN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATAA-CGGATAATCTT----------------CG-TACGCTTGATA-AT-CATATTCGATCGATAATCTT----G---ATATTTATATGCGATA----AATCTTGA---TT--TATATTTAATGAATCTT-AT---T-TCTTATGTT-TGAT-A--TTCCTGT---T-ATTTATGATCGATAA----T-ATTGTTATTCA-TATTTGATAAC-C-TT---CCAATCTGTATTCG-ATA--AATGTTGATC------T-A--------TACACTGTAAATTGCATATAAT--TTT-T---TCCTGC--ATACTTATAT--ACATATCAAGA-TTATCAT-------ATATAAATC--AAGATTTATCG----AATATTAATAGCAA--GATTATTGAATATCAAATATAAATAACAAGATTATCAAATACATACATAGCA-AGATT-ATGGAAT--GCAAA-TCAAGA-TGATC-GCAT---------TTTAATTTTTGCTCATGAATATCAAGATTATTG-----AATATGAAC--CAAGGTTT-TCAC--A-------------A----AAAT--------AAA---CGTTGCAATATTACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAA-TTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT--------------TT--TTGAT-TTAT-A--CGATATA----------TATATGA-T-----ATT----CT----TC-AATCTTG--A-TGTTCATATGA----G---A--AAATCTTG--------A-T-----T-----TAATATATAATC---G-ATAA-TATGGTTATTC------A-T----T-T-A---------C-CAAAAAA---------A-A-AA-T-------AATAAA--TA--A-A-----------T--AAA--TTCGATGATCTTGTTACATGTATT-CATATGCGA-AAA-T--CTTAC---AGCTGTTCA-AT-ATATTACATCTTG---ATTGGTATGCGA
gi|11 : CAAGA-TTATC-GAAT---------G--GAGAT--GCATATAGATAACATGATTATCG-----AATACAAAA--CAATATTT-TCCC--ATATGATTAACAAGA----AAACGGCGTGTAAAA---TGTCGCAATATTATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTT-TATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTAT-A-TAATAATTATATC--CTCAT-GTAT-ATGCGAAA-A----------TCT-TGA-TTTTT-ATT----CG----AT-ATTCTTG--T-C---------------------AAATCTTC--------A-A-----T-----C-ATAT----TC---A-ATAA-Ttgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGT-A-CAA-------A-C--ATCATCCCAT-GTGCGATA-A----------TCT-TGA-TTTAT-ATC----CA----AT-AATCTTG--A-TATTTCTATGC----A---A--AAACTTTG--------A-T-----T-----T-ATAT----TT---G-ATAA-CCTTGACATTC------A----A-T-------------TGC-ATATTCTTTG----ATT-TG-T-------AGTCCATTTA--A-ATGTTG--A-T-T--GTA--ACCGATAATCTTT------ATATT-Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATAT-TCGA----CT------------------AGTAATCTTGA-A-AT--ATATTTG-CC-A-AATTTT----G-----ATTCATATGCGATACTAAAATATTGA---TT--TATATTCGGT-AACC-----------------TT-CGAT-AT-T-TTTGT---T-ATCTATATTCGATAA-
gi|14 : AT-ATT-----G----AT-AATCTTA--T-TATTTATATGC----ATGCA--AAATCTTA--------A-T-----T-----C-ATAT----TT---G-ATAA--ATC----CTC------A-TACA---T-A---------T--GGTAAATCTTG----A-TGTA-T-------ATTCGA--TC--A-ATTTTG--ATG-TCAATA--TTt
gi|15 : TCTTG--C-T--TCATATGC----G---A--AAATCTTG--------C-T-----T-----T-ATAT----TC---G-ATAA-TTTTGATATTT------A-TGCA------------------AAAAAAAATTG----A-T-TA-T-------AAT--A--TA--A-GTta
gi|15 : cactGTGTAAGACGTTACAATA-TCAT-A-CAT-------GTC--TTGCT-TCAT-ATGCGAAA-A----------TCT-TGC-TTTAT-ATT----CG----AT-AATTTTG--A-TATT--TATGC----A---A--AAAcatgtatgatattgtaacgtcttacaca
gi|16 : cactacttatattataatcaattttTTTATATGCGATA----AACCTTGA---TT--C---TTC-----------AT---T-T---GCATT-CAAT-AA-T-CTTGT---T-ATCTATATTCAATAA----T-ATTGTTATTTA-Ta
gi|17 : gtTGAT-TT-ATATGCGA-TAAAT-CTTG-GT-TAATATGTA-------------ATAAATC--T-TG--A-TTTGTATTCAATAATTTTGTT----ATC-------------TATAT-TCGATAATCTTGT------TATTCACATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCT-A-C--------------------------------G-A----------TCT-TAA-TTTAT-TTC----CG----AT-AATCTCT--T-TATTCATATGC----G---A--AACTCTTG--------C-T-----T-----T--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCT-A-CCA-------ATT--TTGAT-TTAC-AGGTGCAA-A----------TCT-TGA-TTTAT-ATC----------AT-AAAC-CG--T-TATagcga
gi|2 : cgtATAT-TATACAAA---TCTTG--ATTCATATG--CGAAAATCTT-------------GATTTGCATTC-GAT-AATCTTGATGTTTATATGCGAATTTTTTATGTATATTCGGTAATCTTGTTGCAAAAGATTGATTTTCGATAAATCTTGTTATTTA-AA-TTACATTCTATAA-CCTTGCTATTTAT--ATGCGA-AAA--TTTA----------GT----TG-------TATA---TATGACAATCGTG-A-TGTTTA---TA--TGCGAAC--ATGTTTATGTGTAT-TCGA------T----------------TG-------TGATGTAT--ATATT---CC-ACAATCTT----GTTTTTTTTTATGTGCGA-A----CATTTTGA---TT--TATATACGGT-AA------------------ATT-CGATAA--T-CTTGT---A-ATTCATATTCGATAA-CT-T-AACG-CATTTA--AATCA--AACT--TT---TCG---CATATT-G-ATATCAA----GATT---------------------------ATCAAATATAAA--ACA-AGAGTTATG---G-----ATATGAATA-ACCAA-A-TTATGGA-------ATATAAATC-----ATTTGTAT----AATAT---TG-CAA--CGTT-TTA-----CAGAattta
gi|2 : cgtgtaaaacggtgcaAATCTTG--------ATTCATATGCGAAAATCTTG--------AT-T-TG-CATTCGATA-A-TCTTGAT----GTTTATATGCGAA---T-TTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTAAAT--------------TACATTCTATAACCTTGCT-------ATTTATATGCGA-AAATTTAGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATAT-ACGGTAA-ATT----------------CGATAATCTTG-TA-ATTCATATTCG----ATAA-CTT----AAC-GCATTTAAAT----CA----AA-CTT-----TTCGCATATT-GAT-Agagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaATATTATAC-AATGC--AT---T-T---ATATTACCAT-A--T-TTGGT---TTATTCATATCCAATAA-CTCT-AT-GTT--TTAGTATTTGATAATTC-TTAGATC-ATCAATATGCG-A-A--AAGTTTGATT------T-A-----------------AATGCCGTTTAAG--TTA-----TTC-G---A-----ATATGAAT-TA-CAAGA-TTATCGATTTCGGTATATAAATC--AA-AATGTTCGCACCAGTTTAAAAA-AAACAGATTGTTG------GAATATATACATCAAA----TCGAATACA--CATAACA-TG--T-GTCGCATCCATAAACTCACGAATTGTCAGTACTATACAATAC--AATTTTCGCATATA-ATAGCAAGG-TATAGACTGTAATTTAAATAAAAAGATTTATCGG--A-------------A----GATC--------AAtcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaAATCTTGG-------ATTCAAGTGCAAAAATCTTG--------ATAT-TGGCATTCGATAGA-TTCTGAT-AGTTCATAATTGCGAA---T-TT-TTATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTAAAT--------------TACAGTCTAT-ACCTTGCT-------A-TTATATGCGA-AAATTGTATTGTATAGTACTGAC-------AATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA-AA---T----------------CGATAATCTTG-TA-ATTCATATTCGA---ATAA-CTTAAACG---GCATTTAAAT----CA----AA-CTT-----TTCGCATATT-GAT-GATCT--Atctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattctGGCGTGTAAAACGTTGCAATA-TCAT-A-TAA-------ATC--TTGAT-TTAT-ATGAAAGA-A----------TCT-TGA-TCTAT-ATT----CA----AC-AATCGTA--A-TATCTATATGC----c
gi|21 : ATTTTCACATATAGATATCAAGATTATCG-----AATATAAAT--CAACATTT-TCGG--A-------------AGGCTAAAT--------AAA---C
gi|3 : tttgaattaaaAAAACTTTGCAA-A-CTAT-AACAA-------ATA--T--AT-TTAT-ATGCAAAA-A----------TTT-TGA-TTCAT-ATT----CA----A---ATCT-G--A-TATTCATATGT----G---A--AAATTTTG--------A-T-----T------------------------AA------CTATTT------A-TA-----------------TGCGAAAAAGTTT-------T-NN-N-------NNNNNN--NN--N-NNNNNN--NNN-N--NNN--NNNNNNNNNNNNN------NNNNN-NNNNNNNNN-NNN-N--NNNNNNNNN--NNNNNN-NN-N------NNNNNN-NNNNNNNNNNNNNNNNNNNNNNN------NTAGT-TTTGGT--CATT-TT-GTATTATTAT----GC----GA-TAAAG-TTGAT-TA-AAATGCG--TAA-TTCTTG-TT--A-TATATACATGTATTTG---ATAA-TC--T-CGCTA-TTCATATTCGATCATCTTGTTGTATATC-------------GATATCTTGATCATTATGTGCAACATATTCATATGCGATAATCTTG--------AT-TATA-CATTCAATA-AATCTTGATTTATATaaa
gi|4 : catgTGTAAAACGTTGCAATA-TTACAA-CAA-------GTCCTTTGAT-TTATAATGCGGAA-A----------TCT-CGGTTTTGTAATT----CG----GT-AA--TTGGTT-TATTTTAAGGC----A---A--AAATCTTG--------ACT-----T-----T-ATAT----TC---G-A-AA-TCTTGTTATTC----------CA---T-A---------TGCGA-AAATCTTG----A-TCTC-T-------ATTCGA--TATTT-TTTTTA--ATT-TA-ATA--TGCAGAGATTTTG--------ATT-CAAATGCGATAAA-TTCTTTGATTTA--TATTTG-AT-G------ATTTTGAATAATTAT---------ACTTTG------ATAATCTTTGTTA----T-TT---ATTTT--T-----C----GA-TAA-TCTTGATATTAATATTCAACTAA-C-CGTG-TG-TC-TATTTAC--------ATGTATAT-TCAAT-TG--ATTTTATATTCGATA------CC----ATT-------------AATTT-TTGTTAATTTTAT------AATT------CGATAAATTTA--------AT-------ACTCGATA-A-CCTT--TGAATATCAATATGCGAt
gi|5 : TGTATT--AT----TA-------TATA---------AATCTTG----ATTTA---TAT--GCAAAA--ATCTTGATTTATAT-TTGATAG-TTTTATCAATATTCATAAACGAAAATC---ATA-ATTTGTATTCAAT--ATAAGCTT----G---ATATAGACATGC---A----AATTTTGAAAATT---ATATTCGAC-AATCTCAATGTCTAT---ATATG-TGAA-AATT-TTTATATAT-GTTTATATTCAATAATCT-TGATA--TATTTC-TATTTGATA--TCATT---TTGCTATATACTTGCAAA--AATTTTGATTGGTATGTGA--------TAA----TTAAATGCA-ATAATCATGA-A---GATTGCCGA-----ATATAAATA-A-CAAGA-TAATCAA-------ATATAAATCAAAA-ATTT-TCT----AAAATCAATC-CAA---ATT
gi|6 : aaataaaacacAAA-A----------TCT-CGA-TTTAT-ATT----TG----ATAAATCT----T-TATTTATGTTC----G---ATTAACTTTT---------A-T-----T-----T-CTGT----AC---G-ATAA--ATC----TTG------A-TGCA---T-A---------TTCAACGAATTTTG----A-TGTA-C-------ATTCAA--TA--A-ATCTAA--ATC-T--ATA--TTCGATAATCTTA------GTATT-CATGTGCAA-AAC-G--CTTGATTTA--TATTCA-ATAA------ACCTTG---GTTTCTATGTTTTGAATTTTT------ATA---TTTGATA-AATC-TT----TTTT-AT----ATTTAAGA--AA-TATTGAT-GT-ACATTTTA-TAGCT-CTTG-----A-TATATACTT------G---GCAA-AC--TCTA--A-TTTATATGCGAT
gi|6 : TTTT-TGTGCGAAAATTC-TT---TTG---TAGGTTCG-ATA--AATCTAGATT------T-ACCGGTGTATAT----TCGATCGCATATAAA--TTAGA---GTTTGC--C-----AAGT--ATATATCAAGAGCTATAAA-------ATGTACATC--AATATTTCTTA----AATATAAA-A--AA--GATTTAT------CAAATATAAA------AATT--CAAA-ACATAGAAACCA-AGGTTTATTGAAT--ATAAA-TCAAG---------------------C--G--TTTTGCACATGAATACTAAGATTATCG-----AATATAGAT--TTAGATTTATTGA--ATGT----------A----CATC--------AAAATTCGTTG-AA---TATGC---------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttG----AT-ATACCTG--TATATTCAC-T-------------AAATCGTG--------A-TG----TACCAGT-ATAT----TC---A-CTAAATCTTGATTACC------AGTATA-T-TCA---------TGGGA-AAATCTTTT---A-T-TAAT-------GTTCGA--TA--A--TCTTGTAATC-T--ATA--T---ACATTCTTG------ATTTT-CATATGCGA-AAAAT--CTGGATTTA--TATTCA-AT-A------ATCTTG-TTGTTTATATGCAAAGAGTTTTGGTTTACATAA-----GATAACCGTATT-G-ATTAT-ATATGTGC----GAATAG-T-TTGAT-----------A--AA-T-CTTG-TTATC-TATATGC--------A---AAAA-TG--T-TG--A-GTTATACTCCATAATCTTGTT----ACTGAAATGCGAAATATATAT-TCGACAATCTTGT--------TTCATatc
gi|8 : tCATGACGTGTAAAATGATGCAATG-TTAC-A-CAA-------ATC--TTGAT-TTAT-ATGCAAAA-AAAAATAAAAATCT-TGA-TCTGT-ATTTTCTCGTTCCAT-A----TA--T-TTTTTATATGCCTTTG---A--AA---TTG--------A-AAGCCAC-----T-GTAT----TCTCTGTGTGT-TCTTGGT-TTCTAACCAA-TA-A-T-C-A---------TGTGAC--------------C-CA-T-------ATGTGG---A--A-ATCTTC--ATT-A--GTA--TTCGATAATTTGG------TTATTTCTTCAGTAA-AAA-T--CTTGTTTTA--T-TTCG-AT-A------ATCTTT-ATATCTATGTGCGA-AAATCTTG------ATttttatttatatc
gi|8 : gggtaG-----CAAAAATAAGTAA-AAAATT-TC----AC---TGTCACGGAGTTT-AT-GAAT--A--AA-TCAAGA-TT------------------------TTCGCACATAGATATAAAGATTATCG-----AA-ATAAAA--CAAGATTT-TTACTGA-------------A----GAAA--------TAA---C----CAA-ATTAT-CGA-------ATACTAATttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcATGGCGTGTAAAAAGTTGCAGTG-TTGT-A-CAG-------ATG--TTGAT-TTAT-ATGCAAAA-A----------TAT-TCA-TCTGT-ATT----CG----AT-AATTTTA--T-CGTTTATATGC----G---A--AAACTTCGATAAAGTTA-T-----C-----T-ATGT----GC---C-AAAA-TAT--TTATTT------A-TACA-T-C-AATAATATCGTGTGTAAAAGGTTGCAATA-T-TA-TATAAATCATTCGA--TA--ATATTTTA--ATTAT--ACAATTTTGATAATCTTG------CTATG-TATATGCAA-AAA-T--ATTTATTTA--TATCTGAAA-A------ATCTAG-ATA--GATATTCGAg
Alignments
lowQualScore : 1111111111111111111111111111111111111
lowQualScore : 11111111111 1111111111 111111111111111111111111 555555555555555555555555555555555555555 1 1111111 11111 1111111 111111 11 11 111111 111 333333333333 111 1111 1 111111 111 2222222 3333333333333333333333 44444444444444 22222222 222222 33333333333333333 22 22222 11 11 555555555555 1 1 666666666666666 3333333 1 1111 3333333 1 11 1 111 3333333333333 111 11111 111 111 11 11 4444444444 1111111 3333 1 4444444444 1111 111 44444444444444444444444 222 2222 1 1111 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 2222222 111111 1 1111 33333333333 2222222 1111 33333333333333 1111 222 1111 0000000000000000000000000000000000000 1111111 11111 666666666666666666666666666666 111 22222222222 1 2
lowQualScore : 2 3 00000000000 44 77 3 0 2 2222222222 2 2 2 5555555555 2 7777 0 3 99999999999 333333333333333333333333 6666 77777 111111111111111111111111111111111111111 3 4 888888888 3 0 3 1111111 3 555 33 0 11111 4 55 4 55 0 8888888 4 0 5 5 66 1 66 0 5 5 444444 22 1 0 00 999999 777 1 666666666666 1 444 6 7777 88 0 777777 2 666 333 6666666 1 9999999999999999999999 44 3 77777777777777 0 00000000 000000 1 5 4 11 77777777777777777 8 3 11 0 22222 22 0 33 444444444444 55 1 0 5 3 1 222222222222222 0 1 7 2222222 5 0 3333 2222222 0 5 33 0 000 5 3333333333333 444 11111 444 444 11 5 00 6666666666 11 5555555 3 1111 3 0 5555555555 6 4 2222 7 4 666 33333333333333333333333 6 444 6 5555 8 1 0 0 1 88 1111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 77 55 6 6 1 1111111 999999 0 6 1 1 7777 1 99999999999 8 4444444 6666 0 00000000000000 3333 8 222 1111 8 6 9999999999999999999999999999999999999 4 3 8888888 1 44444 1 222222222222222222222222222222 111 666 3 0 0 88888888888 1 0 2 3 7 1
lowQualScore : . . ........... .. .. . . . .......... . . . .......... . .... . . ........... ........................ .... ..... ....................................... . . ......... . . . ....... . ... .. . ..... . .. . .. . ....... . . . . .. . .. . . . ...... .. . . .. ...... ... . ............ . ... . .... .. . ...... . ... ... ....... . ...................... .. . .............. . ........ ...... . . . .. ................. . . .. . ..... .. . .. ............ .. . . . . . ............... . . . ....... . . .... ....... . . .. . ... . ............. ... ..... ... ... .. . .. .......... .. ....... . .... . . .......... . . .... . . ... ....................... . ... . .... . . . . . .. .... ................................................................................................ .. .. . . . ....... ...... . . . . .... . ........... . ....... .... . .............. .... . ... .... . . ..................................... . . ....... . ..... . .............................. ... ... . . . ........... . . . . . .
lowQualScore : 2 3 22222222222 22 33 1 7 9 5555555555 9 7 7 9999999999 5 5555 1 2 22222222222 222222222222222222222222 1111 33333 444444444444444444444444444444444444444 6 5 555555555 6 9 6 8888888 3 888 77 9 99999 0 55 0 55 8 1111111 4 4 0 0 99 0 99 2 0 0 444444 88 6 8 55 222222 444 4 888888888888 4 000 8 0000 88 0 000000 5 888 555 3333333 0 8888888888888888888888 66 8 88888888888888 8 11111111 000000 7 7 4 88 88888888888888888 0 2 00 8 22222 00 2 88 222222222222 88 0 0 5 2 0 000000000000000 2 0 0 5555555 8 0 5555 5555555 0 8 88 0 555 8 5555555555555 000 66666 000 444 00 0 22 0000000000 22 8888888 2 6666 8 6 2222222222 7 2 1111 1 3 111 11111111111111111111111 7 333 7 3333 0 4 8 8 7 33 2222 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 00 22 0 7 0 7777777 222222 8 0 4 0 0000 0 44444444444 8 3333333 0000 8 88888888888888 0000 8 444 8888 0 7 8888888888888888888888888888888888888 0 0 6666666 0 11111 0 999999999999999999999999999999 777 666 2 8 8 44444444444 4 0 0 7 3 0
consensus : CATGGCGTGTAAAACGTTGCAATA-TTATA-CAA-------ATC--TTGAT--TTATA-TGCGAAA-A----------TCT-TGATTT-ATA-TT----CG----AT-AATCTTG--T-TATTCATATGC----G---A--AAATCTTG--------A-T-----T-----T-ATAT----TC---G-ATAA-TNTCGNTATTC------A-TACA-T-T-A---------TGCGANAAANNTTG----A-T-TA-T-------ATTCGA--TAA-ATCTT--G--ATT-T--A-TA--TTCGATAATCTTG------NTATT-CATATGCGA-AAA-TC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATGAATTTTG------ATAAT-TTTGGTA--C-ANTTTG-ATTTT---TGTGC----GA-TAATNTTGAT-TTA-TATGCGA-TAA-T-CTTG-TT-TN-TATNTAC--------GATAA-TCT-TG--ATTTATATTCGATAATCTTGTTATT-------------TATATTCGATA--A-----TCTTG-TTA--TTCAT-ATGCGANAATCTTG--------AT-TTG-CATTCGATA-ATCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATC-T---AT---TTATATT-CGAT-A-TCTTGTT-ATTTATATTCGATAA-CT-T-ATCGTTATTTA-TATTCGATAATTCTT---TCGATC-CATATTCGAT--A--AATTTT-G-ATTTA------TAT------A----ATCGCATATAAATTA-A---TTNTGC-A-----ATATGAATATATCAAGA-TTATCGA-------ATATAAA------TCAA-ATTTNT----CNAATATAAANA-CA---AGATTGTTG-----CAAATATAAATANCAAAATT-TCGAATACATACGTAAC--A-AGTTTAT--CGAAT--ACAAA-TCAAG-ATT-TCG---------A--T-----------CGAT-----TTTCGCACATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTTGCAATATTATACGA-------ATCCTGATTTAT-ATGCAAAAATCTTGA-TTTATATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTATA-CAA-------ATC--TTGAT--TTATA-TGCGAAA-A----------TCT-TGATTT-ATA-TT----CG----AT-AATCTTG--T-TATTCATATGC----G---A--AAATCTTG--------A-T-----T-----T-ATAT----TC---G-ATAA-TNTCGNTATTC------A-TACA-T-T-A---------TGCGANAAATNTTG----A-T-TA-T-------ATTCGA--TAA-ATCTT--G--ATT-T--A-TA--TTCGATAATCTTG------NTATT-CATATGCGA-AAA-TC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATGAATTTTG------ATAAT-TTTGGTA--C-ANTTTG-ATTTT---TATGC----GA-TAATCTTGAT-TTA-TATGCGA-TAA-T-CTTG-TT-TN-TATNTAC--------GATAA-TCT-TG--ATTTATATTCGATAATCTTGTTATT-------------TATATTCGATA--A-----TCTTG-TTA--TTCAT-ATGCGATAATCTTG--------AT-TTG-CATTCGATA-ATCTTGATTAATATATATATGCGAA---T-TTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANAT--------------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-TCGATAA-CTTCGATAATCTTGATA-ATTCATATTCGACC-ATAATCTT----G---GTATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATC-T---AT---TTATATT-CGAT-A-TCTTGTT-ATTTATATTCGATAA-CT-T-ATCGTTATTTA-TATTCGATAACTCTT---TCGATC-TATATTCGAT--A--AATTTT-G-ATTTA------TAT------A----ATCGCATATAANTTA-A---TTCTGC-A-----ATATGAATATATCAAGA-TTATCGA-------ATATAAA------TCAA-ATTTNT----CNAATATNAATA-CA---AGATTNTTG-----CAAATATAAATAACAAAATT-TCGAATACATACGTAAC--A-AGNTTAT--CGAAT--ATAAA-TCAAG-ATTATCG---------A--T-----------CGAT-----TTTCGCACATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTCGCAATATTATACGA-------ATCCTGATTTAT-ATGCGAAAATCTTGATTTTATATTCGATANTCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAAA-CGA-------ATC--TTGAT--TTATA-TGCGAAA-A----------TCT-TTATTT-ATA-TT----TG----AT-AAACTTG--T-TATTCATTTGC----G---A--AAATCTTG--------A-T-----T-----C-ATAT----TC---A-ATAA-TATGAATATTT------A-TACAGTGT-A---------TGCGATAAATGTTG----A-T-TA-T-------AAGCGA---AA-ATCTT--G--ATT-T--A-TA--TTTGATAATCTTG------TTATT-CATTTGCAA-AAA-TC--TTGTTTTA--TATTCA-AT-A------ATATGGA-TATTTATATGCGATAAATGTTG------ATAAT-TCCGGTA--CAAATTAG-ATTTT---TGTGC----GA-TAATCTTGAT-TTT-TGTGCGA-TGA-T-CTTGATT-TT-TCTTTAC--------GATGA-TCT-TG--ATTTATAATTGATGTTCTTTTTATT-------------TATATTCAATA--A-----TCTTG-TTA--TCTAT-ATTCGATGATCTTGTTACATGTAT-ATA-TATTTGATG-ATCTTAACTAATATATATATTCTAAGATC-TTGTTATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GAT-GATCTTGTTA--TACAT-----------------ATTCGATGANNNNNNN-------NNNNNNNNNNNN-NNNNNNNNNNNNNNN-NN-NNNN-------NN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATA-A-TCATATTCGATCGATAATCTT----G---ATATTTATATGCGATA----AATCTTGATT--TATATTTAATGAATCTT---ATTTCTTATGTT-TGAT-ATTCCTGTT-ATTTATGATCGATAA----T-ATTGTTATTCA-TATTTGATAAC-CTT---CCAATC-TGTATTCGAT--A--AATGTT-G-ATCTA------TACACTGTAA----ATTGCATATAATTTT-T---TCCTGC-ATACTTATAT--ACATATCAAGA-TTATCAT-------ATATAAA------TCAAGATTTAT----CGAATATTAATAGCA---AGATTATTGAATATCAAATATAAATAACAAGATTATCAAATACATACATAGC--A-AGATTAT--GGAAT--GCAAA-TCAAG-ATGATCGC--------ATTT-----------TAAT-----TTTTGCTCATGAATATCAAGATTATTGAATATGA-------ACCAAGGTTT-T---CACA-------------A----AAAT--------AAA---CGTTGCAATATTACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAA-TTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT-------------TT--TTGAT--TTATA---CGATATA----------TATATGAT-----A-TT----CT----TC-AATCTTG--A-TGTTCATATGA----G---A--AAATCTTG--------A-T-----T-----TAATATATAATC---G-ATAA-TATGGTTATTC------A-T----T-T-A---------C-CAAAAAAAA--A----A-T-AA-T-------A---AA--TAA-A-------------T--A-AA--TTCGATGATCTTGTTACATGTATT-CATATGCGA-AAA-TC--TTAC---AGCTGTTCA-AT-ATATTACATCTTG---ATTGGTATGCGA
gi|11 : CAAG-ATTATCG---------AA-T-----------GGAG-----AT--GCATATAGATAACATGATTATCGAATACAA-------AACAATATTT-T---CCCATATGATTAACAAGA----AAACGGCGTGTAAAA---TGTCGCAATATTATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTT-TATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTATA-TAATAATTATATC--CTCAT--GTATA-TGCGAAA-A----------TCT-TGATTT-TTA-TT----CG----AT-ATTCTTG--T-C---------------------AAATCTTC--------A-A-----T-----C-ATAT----TC---A-ATAA-Ttgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGTA-CAA-------A-C--ATCATC-CCATG-TGCGATA-A----------TCT-TGATTT-ATA-TC----CA----AT-AATCTTG--A-TATTTCTATGC----A---A--AAACTTTG--------A-T-----T-----T-ATAT----TT---G-ATAA-CCTTGACATTC------A----A-T-------------TGC-ATATTCTTTG----ATT-TG-T-------AGTCCATTTAA-ATGTT--G--A-T-T--G-TA--ACCGATAATCTTT------ATATT-Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATAT-TCGA----CT--AGTAATCTTGA-A-AT--ATATTTG-CC-A-AATTTT----G-----ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACC---------------TT-CGAT-ATTTTTGTT-ATCTATATTCGATAA-
gi|14 : -ATA-TT-----G----AT-AATCTTA--T-TATTTATATGC----ATGCA--AAATCTTA--------A-T-----T-----C-ATAT----TT---G-ATAA--ATC----CTC------A-TACA---T-A---------T--GGTAAATCTTG----A-TGTA-T-------ATTCGA--TCA-ATTTT--G--ATG-TCAA-TA--TTt
gi|15 : TCTTG--C-T--TCATATGC----G---A--AAATCTTG--------C-T-----T-----T-ATAT----TC---G-ATAA-TTTTGATATTT------A-TGCA------------------AAAAAAAATTG----A-T-TA-T-------AAT--A--TAA-GTta
gi|15 : cactGTGTAAGACGTTACAATA-TCATA-CAT-------GTC--TTGCT--TCATA-TGCGAAA-A----------TCT-TGCTTT-ATA-TT----CG----AT-AATTTTG--A-TATT--TATGC----A---A--AAAcatgtatgatattgtaacgtcttacaca
gi|16 : cactacttatattataatcaattttTTTATATGCGATA----AACCTTGATT--C---TTC-------------AT---TTGCATT-CAAT-AATCTTGTT-ATCTATATTCAATAA----T-ATTGTTATTTA-Ta
gi|17 : gtTGAT-TTA-TATGCGA-TAAAT-CTTG-GT-TAATATGTA----------ATAAATCT-TG--ATTTGTATTCAATAATTTTGTTATC-------------TATATTCGATA--A-----TCTTG-TTA--TTCAC-ATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCTA-C---------------------------------G-A----------TCT-TAATTT-ATT-TC----CG----AT-AATCTCT--T-TATTCATATGC----G---A--AACTCTTG--------C-T-----T-----T--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCTA-CCA-------ATT--TTGAT--TTACA-GGTGCAA-A----------TCT-TGATTT-ATA-TC----------AT-AAAC-CG--T-TATagcga
gi|2 : cgtATAT-TATACAAA---TCTTG--ATTCATATG--CGAAAATCTT-------------GATTTGCATTC-GAT-AATCTTGATGTTTATATGCGAATTTTTTATGTATATTCGGTAATCTTGTTGCAAAAGATTGATTTTCGATAAATCTTGTTATTTA-AA-TTACATTCTATAA-CCTTGCTATTTAT--ATGCGA-AAA--TTTA----------GT----TG-------TATA---TATGACAATCGTG-A-TGTTTA---TA--TGCGAAC--ATGTTTATGTGTAT-TCGA------TTG-------TGATGTAT--ATATT---CC-ACAATCTT----GTTTTTTTTTATGTGCGA-A----CATTTTGATT--TATATACGGT-AA----------------ATT-CGATAA-TCTTGTA-ATTCATATTCGATAA-CT-T-AACG-CATTTA--AATCA--AACT-TT---TCG----CATATT-GAT--ATCAA-----G-ATT----------------------ATCAAATATAAAACA-AGAGTTATG--G-----ATATGAATA-ACCAA-A-TTATGGA-------ATATAAA------TC---ATTTGT----ATAATAT---TG-CA---ACGTT-TTA-----CAGAattta
gi|2 : cgtgtaaaacggtgcaA--A-----TCTTG---A--TTCAT-ATGCGAAAATCTTG--------AT-TTG-CATTCGATA-ATCTTGAT----GTTTATATGCGAA---T-TTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTAAAT--------------TACATTCTATAACCTTGCT-------ATTTATATGCGA-AAATTTAGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TA-ATTCATATTCG----ATAA-CTT----AAC-GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-Agagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaATATTATAC-AATG-C---AT---TTATATTACCAT-A-TTTGGTTTATTCATATCCAATAA-CTCT-AT-GTT--TTAGTATTTGATAATTCTTAGATC-ATC-AATATGCGA---A--AAGTTT-G-ATTTA---------------A----ATGCCGTTTAAGTTA-----TTC-G--A-----ATATGAAT-TA-CAAGA-TTATCGATTTCGGTATATAAA------TCAA-AATGTTCGCACCAGTTTAAAAA-AAAC-AGATTGTTG------GAATATATACATCAAA----TCGAATAC--ACATAAC--A-TG--TGT--CGCATCCATAAACTCACGAATTGTCA---------G--TACTATACAATACAAT-----TTTCGCATATA-ATAGCAAGG-TATAGACTGTAATTTAAATAAAAAGATTTAT---CGGA-------------A----GATC--------AAtcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaA--A-----TCTTG-G-A--TTCAA-GTGCAAAAATCTTG--------ATATTGGCATTCGATAGATTCTGAT-AGTTCATAATTGCGAA---T-TT-TTATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTAAAT--------------TACAGTCTAT-ACCTTGCT-------A-TTATATGCGA-AAATTGTATTGTATAGTACTGAC-------AATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TA-ATTCATATTCGA---ATAA-CTTAAACG---GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-GATC-T---Atctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattctGGCGTGTAAAACGTTGCAATA-TCATA-TAA-------ATC--TTGAT--TTATA-TGAAAGA-A----------TCT-TGATCT-ATA-TT----CA----AC-AATCGTA--A-TATCTATATGC----c
gi|21 : AT-----TTTCACATATAGATATCAAGATTATCGAATATAA-------ATCAACATTT-T---CGGA-------------AGGCTAAAT--------AAA---C
gi|3 : tttgaattaaaAAAACTTTGCAA-A-CTATAACAA-------ATA--T--AT--TTATA-TGCAAAA-A----------TTT-TGATTC-ATA-TT----CA----A---ATCT-G--A-TATTCATATGT----G---A--AAATTTTG--------A-T-----T------------------------AA------CTATTT------A-TA-----------------TGCGAAAAAGTTT-------T-NN-N-------NNNNNN--NNN-NNNNN--N--NNN-N--N-NN--NNNNNNNNNNNNN------NNNNN-NNNNNNNNN-NNN-NN--NNNNNNNN--NNNNNN-NN-N------NNNNNNN-NNNNNNNNNNNNNNNNNNNNNN------NTAGT-TTTGGT---C-ATTTTGTATTAT---TATGC----GA-TAAAGTTGAT-TAA-AATGCG--TAA-TTCTTG-TT--A-TATATACATGTATTTGATAA-TCT-CGCTATTCATATTCGATCATCTTGTTGT---------------ATAT-CGATA--------TCTTGATCA--TT-AT-GTGCAACA----T---------AT-TCA-TATGCGATA-ATCTTGATT-ATACATaaa
gi|3 : catg-------ATC--TTGATCATTATG-TGC-AAC-A----------T-----ATTC-ATA-TG----CG----AT-AATCTTGA-T-TAT--ACATTC----A---AT-AAATCTTG--------A-T-----T-----T-ATAT----Ttcaataaatcttgatttatatt
gi|4 : catgaaaactttgcaaactataacaaatatatttatatgcaaaaattttgattcatattcaaatctgatattcatatgtgaaaattttgattaactatttatatgcgaaaaagttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttttggtcattttgtattattatgcgataaagttgattaaaatgcgtaattcttgttatatatacatgtatttgataatctcgctattcatattcgatcatcttgttgtatatcgatTGTAAAACGTTGCAATA-TTACAACAA-------GTCCTTTGAT--TTATAATGCGGAA-A----------TCT-CGGTTTTGTAATT----CG----GT-AAT--TGGTT-TATTTTAAGGC----A---A--AAATCTTG--------ACT-----T-----T-ATAT----TC---G-A-AA-TCTTGTTATTC----------CA-T---A---------TGCGA-AAATCTTG----A-TCTC-T-------ATTCGA--TAT-TTTTTTTA--ATT-T--AATA--TGCAGAGATTTTG--------ATT-CAAATGCGATAAA-TTCTTTGATTTA--TATTTG-AT-G------ATTTTGAATAATTATAC---------TTTG------ATAATCTTTGTTA------TTT--ATTTT---T---C----GA-TAATCTTGATATTAATATTCAACTAA-C-CGTG-TG-TC-TATTTAC----------------------ATGTATATTCAA-----TTGAT-TT-------------TATATTCGATACCATTAATTTTTG-TTAATTTTATAATTCGATAAATTTA--------AT------ACTCGATA-ACCTT--TGAATATCAATATGCGA
gi|5 : --------AAA---CACTGTATTATTATATAA-------ATCTTGATTTAT-ATGCAAAAATCTTGA-TTTATATTTGATAGTTT
gi|5 : aaata----AATTTGGATT--GATTTTAGAA-AATT-TTTGAT---TTATATT-TGATTA-TCTTGTT-ATTTATATTCGGCAATCT-TCATGATTATT-G-CATT---TAATT---------ATCACATAC-CAATCAA--AATTTTTGCAAGTA------TAT------A-------GCA---AAATGA------TATCA-A-----ATAGAAATATATCAAGA-TTATTGA-------ATATAAACATATATAAA-AATTTT----CACATATATAGA-CATTGAGATTGTCG-------AATATAATTTTCAAAATT-T-GCATGTCTA--TATC--A-AGCTTATATTGAAT--ACAAA-TTATG-ATTTTCGTTTATGAATA--T-----------TGATAAAACTATCAAATATAAAT--CAAGATTTTTGCATATAA-------ATCAAGATTT-tatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtgataattaaatgcaataatcatgaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatatAAA-A----------TCT-CGATTT-ATA-TT----TG----ATAAATCT----T-TATTTATGTTC----G---ATTAACTTTT---------A-T-----T-----T-CTGT----AC---G-ATAA--ATC----TTG------A-TGCA---T-A---------TTCAACGAATTTTG----A-TGTA-C-------ATTCAA--TAA-ATCTA--A--ATC-T--A-TA--TTCGATAATCTTA------GTATT-CATGTGCAA-AAC-GC--TTGATTTA--TATTCA-ATAA------ACCTTG---GTTTCTATGTTTTGAATTTTT------ATA---TTTGATA----AATCT---TTTT---TATATTTAAGA--AATATTGAT-GTA-CATTTTA-TAGCT-CTTG-----A-TATATACTT------GGCAA-ACTCTA--ATTTATATGCGAT
gi|6 : TTTT-TGTGCGAAAATTCTT---TTG----TAGGTTCGAT--A--AATCTA-G-ATTTACCGGTGTAT------ATTCGATCGCATATAAATTAGA---GTTTGCCA-----A---GTATATATCAAGAGCTATAAA-------ATGTACA------TCAATATTTCT----TAAATATAAA-A--A---AGATTTAT------CAAATATAAA------AATT--CAAA-ACATA-GAAACCAA-GGTTTAT--TGAAT--ATAAA-TCAAG--------------------------------CG-------TTTTGCACATGAATACTAAGATTATCGAATATAG-------ATTTAGATTTAT---TGAATGT----------A----CATC--------AAAATTCGTTG-AATAT-----GC-------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttG----AT-ATACCTG--TATATTCAC-T-------------AAATCGTG--------A-TG----TACCAGT-ATAT----TC---A-CTAAATCTTGATTACC------AGTATA-T-TCA---------TGGGAAAATCTTTT----A-T-TAAT-------GTTCGA--TAA--TCTT--GTAATC-T--A-TA--T---ACATTCTTG------ATTTT-CATATGCGA-AAAATC--TGGATTTA--TATTCA-AT-A------ATCTTGT-TGTTTATATGCAAAGAGTTTTGGTTTACATAA-----GATAACC-GTATTG-ATTATATATGTGC----GAATAGT-TTGAT-----------A--AA-T-CTTG-TTATC-TATATGC--------AAAAA-TGT-TG--AGTTATACTCCATAATCTTGTTACTGAAATGCGAAATATATATTCGACA--A-----TCTTG-T----TTCAT-atc
gi|7 : t-A-----ATAAAAATGAAACAAGA-TTGTCGA-------ATATATA------Tttttatttatatc
gi|8 : tgatatacctgtatattcactaaatcgtgatgtaccagtatattcactaaatcttgattaccagtatattcatgggaaaatcttttattaatgttcgataatcttgtaatctatatacattcttgattttcatatgcgaaaaatctggatttatattcaataatcttgttgtttatatgcaaagagttttggtttacataagataaccgtattgattatatatgtgcgaatagtttgataaatcttgttatctatatgcaaaaatgttgagttatactccataatcttgttactgaaatgcgaaCATGACGTGTAAAATGATGCAATG-TTACA-CAA-------ATC--TTGAT--TTATA-TGCAAAA-AAAAATAAAAATCT-TGATCT-GTA-TTTTCTCGTTCCAT-A----TA--T-TTTTTATATGCCTTTG---A--AA---TTG--------A-AAGCCAC-----T-GTAT----TCTCTGTGTGT-TCTTGGT-TTCTAACCAA-TA-A-T-C-A---------TGTGAC--------------C-CA-T-------ATGTGG---AA-ATCTT--C--ATT-A--G-TA--TTCGATAATTTGG------TTATTTCTTCAGTAA-AAA-TC--TTGTTTTA--T-TTCG-AT-A------ATCTTTA-TATCTATGTGCGA-AAATCTTG------ATtatatc
gi|8 : gggtaG-----CAAAAATAAGTAA-AAAATT-TC----AC---TGTCAC--GGAGTTTAT---GAAT--A--AA-TCAAG-ATT--------------------------------------TTCGCACATAGATATAAAGATTATCGAA-ATAA-------AACAAGATTT-TTACTGAA-------------G----AAAT---------AA---C----CAA-ATTAT-CGA-------ATACTAATttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcATGGCGTGTAAAAAGTTGCAGTG-TTGTA-CAG-------ATG--TTGAT--TTATA-TGCAAAA-A----------TAT-TCATCT-GTA-TT----CG----AT-AATTTTA--T-CGTTTATATGC----G---A--AAACTTCGATAAAGTTA-T-----C-----T-ATGT----GC---C-AAAA-TAT--TTATTT------A-TACA-T-C-AATAATATCGTGTGTAAAAGGTTGCAATA-T-TA-TATAAATCATTCGA--TAATATTTT--A--ATTAT--A-CAATTTTGATAATCTTG------CTATG-TATATGCAA-AAA-TA--TTTATTTA--TATCTGAAA-A------ATCTAGA-TA--GATATTCGAg
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111
lowQualScore : 2222222222222222222222222222 1111111111 11111111 77777777777777777777777777777777777777777777777777777 11111111 1111111 22222222222 1111111 111111 11 2222222222 2222222222 22222222 111 222222 5555555555555555555555 111 2222 1 11111111 22222222222 3333333333333333 111 11 222 1 11 5555555 1 1 1 1111 1 1 11 1 1 4444444444444 111 111 111 111 11 44444444444 111111 4444 1 222222222 1111111111 111 444444444444444444444444444 2222 11111 333333333 4444444444444444 1 1111 11 111111111111111111111111111111111111111111111111111111111111111 111 444444444444 3333333333333 222222 1 1111 333333 22222222222 44444444444444444444444444 11111 111 111111 444444444444444444444444444444444444444444444444444444 1111111 11111 666666666666666666666666666666 2222222
lowQualScore : 2 2 0 5 2 3333333333333333333333333333 555 2 9999999 33 2 2 1111111111 2 2 2 2 6666666666 2 555 0 4 99999999 33 00000000 2 77777 66 6666 555 3 0 11111111111111111111111111111111111111111111111111111 3 0 4 44 55555555 1111111 555 555 88 3 666 8888 4 44444444444 4 8888888 4 0 1 5 66 22 66 0 55 5 444444 22 3 1 0 5555555555 3 8 3 7777777777 33333333 3 1 8 8 88 888 888888 1 3333333333333333333333 111 0 1111 3 0 66666666 55555555555 6 1 8888888888888888 000 3 66 3 333 5 0 88 8888888 7 1 3 7 7 1 7 1 2 0 55 5555 3 0 88 3 0 8888888888888 777 0 444 444 88 444 11 88888888888 444444 1111 0 0 999999999 3333333333 7 7 666 777777777777777777777777777 1 6 6666 6 66666 888888888 0 1 6 77 1 4444444444444444 0 5555 1 8 8 11 222222222222222222222222222222222222222222222222222222222222222 0 111 999999999999 0000000000000 11 333333 6 1 1 7777 1 1 666666 3 66666666666 00000000000000000000000000 99 11111 0 777 888888 6 222222222222222222222222222222222222222222222222222222 0 4 2 0 6666666 1 11111 1 666666666666666666666666666666 888 1 0 1 0 1111111 2 8 1 1
lowQualScore : . . . . . ............................ ... . ....... .. . . .......... . . . . .......... . ... . . ........ .. ........ . ..... .. .... ... . . ..................................................... . . . .. ........ ....... ... ... .. . ... .... . ........... . ....... . . . . .. .. .. . .. . ...... .. . . . .......... . . . .......... ........ . . . . .. ... ...... . ...................... ... . .... . . ........ ........... . . ................ ... . .. . ... . . .. ....... . . . . . . . . . . .. .... . . .. . . ............. ... . ... ... .. ... .. ........... ...... .... . . ......... .......... . . ... ........................... . . .... . ..... ......... . . . .. . ................ . .... . . . .. ............................................................... . ... ............ ............. .. ...... . . . .... . . ...... . ........... .......................... .. ..... . ... ...... . ...................................................... . . . . ....... . ..... . .............................. ... . . . . ....... . . . .
lowQualScore : 2 9 1 7 9 7777777777777777777777777777 000 9 3333333 99 9 7 7777777777 7 7 5 5 0000000000 4 777 1 2 22222222 77 44444444 9 11111 88 1111 444 1 6 55555555555555555555555555555555555555555555555555555 6 4 5 55 00000000 8888888 666 888 66 4 444 1111 0 55555555555 4 1111111 4 4 4 0 99 44 99 2 55 0 444444 88 5 2 8 2222222222 8 0 2 8888888888 00000000 2 0 0 0 88 000 888888 0 0000000000000000000000 000 2 2222 2 0 88888888 77777777777 7 0 2222222222222222 000 2 44 5 333 0 7 33 7777777 3 0 3 3 3 0 3 0 3 7 33 3333 3 7 33 3 7 8888888888888 555 2 222 000 88 222 22 66666666666 444444 8888 8 6 000000000 6666666666 1 9 111 888888888888888888888888888 8 7 8888 7 77777 555555555 8 7 7 00 4 6666666666666666 8 6666 8 0 0 00 222222222222222222222222222222222222222222222222222222222222222 8 888 000000000000 8888888888888 44 000000 0 4 0 0000 0 0 888888 2 22222222222 33333333333333333333333333 22 00000 3 000 222222 7 333333333333333333333333333333333333333333333333333333 4 2 8 2 2222222 0 00000 0 555555555555555555555555555555 888 7 1 4 7 7777777 2 0 2 0
consensus : CATGGCGTGTAAAACGTTGCAATA-TTATA-C-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGCGAAA-A----------TCT-TG-ATTT-ATA-TT----CG----ATAA-TCTTG--TTATTTATATGC----G---A--AAATCTTG--------A-T-----TT--ATAT----TC---G-ATAA--TNTCG-NT----ATTC------ATACA-T-----------TA---------TGCGANAAANNTTG----A-T-TAT-------ATTCGA--TAA--ATCTT--GATT-T--A-TA-----------TTCGAT-AATCTTG------NTATT-CATATGCAA-AAATC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATAAAT-----TTTGATAAT-TTTGNTAC-ANTTTG-ATTTTTATGC----GATAATNTTGAT-TTA-TATGCGA-TAA-T-CTTG-TTTA-TATNTAC-T------GATAA-TCT-TG--ATTTATATTCGATNATCTTGT----TATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATNTATATGCGAA---TTT-TTATGTATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTAAATTACATTCTATGACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAN--ATTTTGATTTATAT-NCGATAA-CTTCGATAATCTTGATAATTCATATTCGA-C-ATAATCTT----G--GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATC-T-----------AT---TTATATT-CGAT--A-TCTTGTT-AT-----TTATATTCGATAA-CT-T-ATTGTTATTTA-TATTCGATAATTCTT---TCGATC-TATATNCGAT--AAATCTT-G-A--TTTA------TAT------A----ATCGCATATAAGTTA-AT---TNTGC-A-----AT----ATGNATATAT--CAAGA------------TTAT---CGA-------ATATAAA------TCAA-ATTTNT----CNAATATAAANA-CA---AGATTNTTG-----CAA---ATATAAATATCAA-AATT-TCGAATACATACGTAA--C--A-AGTTTAT--CGAAT--AT--AAA-TCAAGATT-T------------C-G---------A-T------C--G-------AT-----TTTCGCATATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTTGCAATATTATACGA-------ATCTTGATTTAT-ATGCGAAAATCTTGATTTATATTCGATAATCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTATA-C-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGCGAAA-A----------TCT-TG-ATTT-ATA-TT----CG----ATAA-TCTTG--TTATTCATATGC----G---A--AAATCTTG--------A-T-----TT--ATAT----TC---G-ATAA--TNTCG-NT----ATTC------ATACA-T-----------TA---------TGCGANAAANNTTG----A-T-TAT-------ATTCGA--TAA--ATCTT--GATT-T--A-TA-----------TTCGAT-AATCTTG------NTATT-CATATGCGA-AAATC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATGAAT-----TTTGATAAT-TTTGGTAC-ANTTTG-ATTTTTGTGC----GATAATNTTGAT-TTA-TATGCGA-TAA-T-CTTG-TTTN-TATNTAC--------GATAA-TCT-TG--ATTTATATTCGATAATCTTGT----TATTTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGANAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATATATATGCGAA---TTTGTTATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTANATTACATTCNATAACCTTGCTATTTATATGCGAAAATTTTGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATAT-CCGATAA-CTTCGATAATCTTGATAATTCATATTCGACC-ATAATCTT----G--GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATC-T-----------AT---TTATATT-CGAT--A-TCTTGTT-AT-----TTATATTCGATAA-CT-T-ATCGTTATTTA-TATTCGATAATTCTT---TCGATC-CATATTCGAT--AAATTTT-G-A--TTTA------TAT------A----ATCGCATATAAATTA-AT---TNTGC-A-----AT----ATGAATATAT--CAAGA------------TTAT---CGA-------ATATAAA------TCAA-ATTTNT----CNAATATAAANA-CA---AGATTGTTG-----CAA---ATATAAATANCAA-AATT-TCGAATACATACGTAA--C--A-AGTTTAT--CGAAT--AC--AAA-TCAAGATT-T------------C-G---------A-T------C--G-------AT-----TTTCGCACATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTTGCAATATTATACGA-------ATCCTGATTTAT-ATGCAAAAATCTTGATTTATATTCGATANTCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAAA-C-GA-------AT----------------C--TTG---AT-T-------TAT--A-TGCGAAA-A----------TCT-TT-ATTT-ATA-TT----TG----ATAA-ACTTG--TTATTCATTTGC----G---A--AAATCTTG--------A-T-----TC--ATAT----TC---A-ATAA--TATGA-AT----ATTT------ATACAGTG----------TA---------TGCGATAAATGTTG----A-T-TAT-------AAGCGA---AA--ATCTT--GATT-T--A-TA-----------TTTGAT-AATCTTG------TTATT-CATTTGCAA-AAATC--TTGTTTTA--TATTCA-AT-A------ATATGGA-TATTTATATGCGATAAAT-----GTTGATAAT-TCCGGTACAAATTAG-ATTTTTGTGC----GATAATCTTGAT-TTT-TGTGCGA-TGA-T-CTTGATTTT-TCTTTAC--------GATGA-TCT-TG--ATTTATAATTGATGTTCTTTT----TATTTATAT-TCAATA--A-----TCTTGT------TA--TCTAT-ATTCGATGATCTTGTTACATGTAT-A-TA-TATTTGAT-G-ATCTTAACTAATATATATATTCTAAGATCTTGTTATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GAT-GATCTTGTTA--TACAT---ATTCGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NN-NNNNNN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATAA-CGGATAATCTTCG-TACGCTTGATAA-TCATATTCGATCGATAATCTT----G--ATATTTATATGCGATA----AATCTTGATT--TATATTTAATGAATCTT-----------ATTTCTTATGTT-TGAT--ATTCCTGTT-AT-----TTATGATCGATAA----T-ATTGTTATTCA-TATTTGATAA-CCTT---CCAATC-TGTATTCGAT--AAATGTT-G-A--TCTA------TACACTGTAA----ATTGCATATAATTTT-TT---CCTGC-ATACTTAT----AT--ACATAT--CAAGA------------TTAT---CAT-------ATATAAA------TCAAGATTTAT----CGAATATTAATAGCA---AGATTATTGAATATCAA---ATATAAATAACAA-GATTATCAAATACATACATAG--C--A-AGATTAT--GGAAT--GC--AAA-TCAAGAT-----------------G---------A-T------C--GCATTTTAAT-----TTTTGCTCATGAATATCAAGATTATTGAATATGA-------ACCAAGGTTT-T---CACA-------------A----AAAT--------AAA---CGTTGCAATATTACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT--------------T----------------T--TTG---AT-T-------TAT--A---CGATATA----------TATATG-AT-----A-TT----CT----TCAA-TCTTG--ATGTTCATATGA----G---A--AAATCTTG--------A-T-----TTA-ATATATAATC---G-ATAA--TATGG-TT----ATTC------AT----T-----------TA---------C-CAAAAAAAA--A----A-T-AAT-------A---AA--TAA--A-----------T--A-AA-----------TTCGAT-GATCTTGTTACATGTATT-CATATGCGA-AAATC--TTAC---AGCTGTTCA-AT-ATATTACATCTTG---ATTGGTATGCGA
gi|11 : CAAGATTAT------------C-G---------AAT------G--G-------AG-----AT--GCATATAGATAACATGATTATCGAATACAA-------AACAATATTT-T---CCCATATGATTAACAAGA----AAACGGCGTGTAAAA---TGTCGCAATATTATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTATA-T-AATAATTATAT----------------C--CTC---AT-G-------TAT--A-TGCGAAA-A----------TCT-TG-ATTT-TTA-TT----CG----ATAT-TCTTG--TC---------------------AAATCTTC--------A-A-----TC--ATAT----TC---A-ATAA--Ttgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGTA-C-AA-------A-----------------C--ATC---ATCC-------CAT--G-TGCGATA-A----------TCT-TG-ATTT-ATA-TC----CA----ATAA-TCTTG--ATATTTCTATGC----A---A--AAACTTTG--------A-T-----TT--ATAT----TT---G-ATAA--CCTTG-AC----ATTC------A---A-T----------------------TGC-ATATTCTTTG----ATT-TGT-------AGTCCATTTAA--ATGTT--GA-T-T--G-TA-----------ACCGAT-AATCTTT------ATATT-Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATAT-TCGA----CT--AGTAATCTTGA-AAT--ATATTTG-CC-A-AATTTT----G----ATTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AACC-----------------------TT-CGAT--ATTTTTGTT-AT-----CTATATTCGATAA-
gi|14 : -ATA-TT-----G----ATAA-TCTTA--TTATTTATATGC----ATGCA--AAATCTTA--------A-T-----TC--ATAT----TT---G-ATAA---ATC---------CTC------ATACA-------------TA---------T--GGTAAATCTTG----A-TGTAT-------ATTCGA--TCA--ATTTT--GATG-TCAA-TA-----------TTt
gi|15 : -TCTTG--CT--TCATATGC----G---A--AAATCTTG--------C-T-----TT--ATAT----TC---G-ATAA--TTTTG-AT----ATTT------ATGCA---------------------------AAAAAAAATTG----A-T-TAT-------AAT--A--TAA--GTta
gi|15 : cactGTGTAAGACGTTACAATA-TCATA-C-AT-------GT----------------C--TTG---CT-T-------CAT--A-TGCGAAA-A----------TCT-TG-CTTT-ATA-TT----CG----ATAA-TTTTG--ATATT--TATGC----A---A--AAAcatgtatgatattgtaacgtcttacaca
gi|16 : cactacttatattataatcaattttTTTATATGCGATA----AACCTTGATT--C---TTC---------------------AT---TTGCATT-CAAT--AATCTTGTT-AT-----CTATATTCAATAA----T-ATTGTTATTTA-Ta
gi|17 : gtTGAT-TTA-TATGCGA-TAAAT-CTTG-GTTAATATGTA----------ATAAATCT-TG--ATTTGTATTCAATAATTTTGT----TATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAC-ATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCTA-C-------------------------------------------------------------G-A----------TCT-TA-ATTT-ATT-TC----CG----ATAA-TCTCT--TTATTCATATGC----G---A--AACTCTTG--------C-T-----TT---TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCTA-C-CA-------AT----------------T--TTG---AT-T-------TAC--A-GGTGCAA-A----------TCT-TG-ATTT-ATA-TC----------ATAA-AC-CG--TTATagcga
gi|2 : cgt--------AAA---CGGTGCAATATTATACAA-------ATCTTGATTCAT-ATGCGAAAATCTTGATTTGCATTCGATAATCTattta
gi|2 : cgtgtaA---TAT-TATACAA--ATCTTGATTCATAT-GCGA---------A-AATCTTGAT---TTGCATTCGA----TAATCTT----G--ATGTTTATATGCG--A----ATTTTTTATG--TATATTCGGT-AATC-TTGTTGCAAAAGAT---TGATTTT-CGATAAA-TCTTGTT-ATTTAAATTACATTCTATAA-CC----TTGCTATTTA-TATGCGAAAA---TT---TAGTTG-TATATATGAC---AATCGT-G-ATGTTTA------TAT------G------CGAACAT--GTTT-ATGTGTATTC-G-----ATTGTGATGTATATATTCCACAATCTTGTTTTTTTTTATGTGCGA-------ACAT---------TTTG-ATTTAT----ATACGGTAAATT-CG---ATAATCTTG-----TAATTCATAT-----TCGATAACT-T--AACGCAT--TTAAATC--A-AACTTTT--CGCAT--ATTGATA-TCAAGATTAT------------CAA---------A-TATAAAACAAG-------AG-----TTATGGATATGAATAACCAAATTATGGAATATAA-------ATCA-----T-T---TGTA------------------------------TAA---TATTGCAACGTTTTACtgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaA--A-----TCTTG--------A--TTCAT-ATGCGAAAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGAT----GTTTATATGCGAA---TTTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTAAATTACATTCTATAACCTTGCTATTTATATGCGAAAATTTAGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATAT-ACGGTAA-ATTCGATAATCTTG-TAATTCATATTCG----ATAA-CTT----AACGCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-Aagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaTGTAAAACGTTGCAATA-TTATA-C-AA-------ATGATTTATATTCCATAAT--TTGGTTAT-T-------CAT--A-TCCATAA-C----------TCT-TG-TTTT-ATA-TT----TG----ATAA-TCTTG--ATATCAATATGC----G---A--AAAGTTTG--------A-T-----TT--AAAT----GC---G-TTAAGTTATCGAAT----ATtcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcATATTATAC-AATG-C-----------AT---TTATATTACCAT--A-TTTGGTTTAT-----TCATATCCAATAA-CTCT-AT-GTT--TTAGTATTTGATAATTCTTAGATC-ATC-AATATGCGA---AAAGTTT-G-A--TTTA---------------A----ATGCCGTTTAAGTTA------TTCG--A-----AT----ATGAAT-TA---CAAGA------------TTAT---CGATTTCGGTATATAAA------TCAA-AATGTTCGCACCAGTTTAAAAA-AAAC-AGATTGTTG------GA---ATATATACATCAA-A----TCGAATAC--ACATAA--C--A---TGTGT--CGCATCCAT--AAACTCACGAAT-TGTCAGTACTATAC-A---------A-TA-----C--A-------AT-----TTTCGCATATA-ATAGCAAGG-TATAGACTGTAATTTAAATAAAAAGATTTAT---CGGA-------------A----GATC--------AAgagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaA--A-----TCTTGG-------A--TTCAA-GTGCAAAAATCTTG--------ATAT-TGGCATTCGAT-AGATTCTGAT-AGTTCATAATTGCGAA---TTT-TTATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTAAATTACAGTCTAT-ACCTTGCTA-TTATATGCGAAAATTGTATTGTATAGTACTGACAATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA-AA---TCGATAATCTTG-TAATTCATATTCGA---ATAA-CTTAAACG--GCATTTAAAT----CA----AA-CTT--TTCGCATATT-GAT-GATC-T-----------Atctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattctGGCGTGTAAAACGTTGCAATA-TCATA-T-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGAAAGA-A----------TCT-TG-ATCT-ATA-TT----CA----ACAA-TCGTA--ATATCTATATGC----c
gi|21 : -------AT-----TTTCACATATAGATATCAAGATTATCGAATATAA-------ATCAACATTT-T---CGGA-------------AGGCTAAAT--------AAA---C
gi|3 : tttgaattaaaAAAACTTTGCAA-A-CTATAAC-AA-------AT----------------A--T-----AT-T-------TAT--A-TGCAAAA-A----------TTT-TG-ATTC-ATA-TT----CA----A--A-TCT-G--ATATTCATATGT----G---A--AAATTTTG--------A-T-----T--------------------AA--------CT----ATTT------ATA--------------------------TGCGAAAAAGTTT-------T-NNN-------NNNNNN--NNN--NNNNN--NNNN-N--N-NN-----------NNNNNN-NNNNNNN------NNNNN-NNNNNNNNN-NNNNN--NNNNNNNN--NNNNNN-NN-N------NNNNNNN-NNNNNNNNNNNNNNNNNN-----NNNNNTAGT-TTTGGT-C-ATTTTGTATTATTATGC----GATAAAGTTGAT-TAA-AATGCG--TAA-TTCTTG-TT-A-TATATACATGTATTTGATAA-TCT-CGCTATTCATATTCGATCATCTTGTTGTATATCGATATCTTGATC--A-----TTATGTGCAACATA--TTCAT-ATGCGATAATCTTG--------AT-TATA-CATTCAATAA-ATCTTGATTTATATaaa
gi|4 : catgTGTAAAACGTTGCAATA-TTACAAC-AA-------GT----------------CCTTTG---AT-T-------TAT--AATGCGGAA-A----------TCT-CG-GTTTTGTAATT----CG----GTAA-T--TGGTTTATTTTAAGGC----A---A--AAATCTTG--------ACT-----TT--ATAT----TC---G-A-AA--TCTTG-TT----ATTC---------CA-T------------A---------TGCGA-AAATCTTG----A-TCTCT-------ATTCGA--TAT--TTTTTTTAATT-T--AATA-----------TGCAGA-GATTTTG--------ATT-CAAATGCGATAAATTCTTTGATTTA--TATTTG-AT-G------ATTTTGAATAATTATAC--------------TTTGATAATCTTTGTTA----TTT--ATTTTT---C----GATAATCTTGATATTAATATTCAACTAA-C-CGTG-TGTC-TATTTAC----------------------ATGTATATTCAA-----TTGA----T-TTTATAT-TCGATACCATTAATTTTTGT------TAATTTTATAATTCGATAAATTTA--------AT-------ACTCGAT-A-ACCTT--TGAATATCAATATGCGAt
gi|5 : --------AAA---CACTGTATTATTATATAA-------ATCTTGATTTAT-ATGCAAAAATCTTGATTTATATTTGATAGTTT
gi|5 : aaata----AATTTGGATT--GATTTTAGAA-AATT-TTTG--------AT---TTATATT-TGATT-A-TCTTGTT-AT-----TTATATTCGGCAATCT-TCATGATTATT-G-CATT---TAATT---------ATCACATAC-CAATCAAAATTTTTGCA--AGTA------TAT------A-------GCA---AAATGA------TATCA-A-----AT----AGAAATATAT--CAAGA------------TTAT---TGA-------ATATAAACATATATAAA-AATTTT----CACATATATAGA-CATTGAGATTGTCG-------A---ATATAATTTTCAA-AATT-T-GCATGTCTA--TAT--C--A-AGCTTATATTGAAT--AC--AAA-TTATGATT-TT-----------C-GTTTATGAATA-T------T--G-------ATAAAACTATCAAATATAAAT--CAAGATTTTTGCATATAA-------ATCAAGATTT-tatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtgataattaaatgcaataatcatgaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatatAAA-A----------TCT-CG-ATTT-ATA-TT----TG----ATAAATCTT----TATTTATGTTC----G---ATTAACTTTT---------A-T-----TT--CTGT----AC---G-ATAA---ATC---------TTG------ATGCA-T------------A---------TTCAACGAATTTTG----A-TGTAC-------ATTCAA--TAA--ATCTA--AATC-T--A-TA-----------TTCGAT-AATCTTA------GTATT-CATGTGCAA-AACGC--TTGATTTA--TATTCA-ATAA------ACCTTG---GTTTCTATGTTTTGAAT-----TTTTATA---TTTGATA--AATCT---TTTTTATATTTAAGA-AATATTGAT-GTA-CATTTTA-TAGCT-CTTG----A-TATATACTT------GGCAA-ACTCTA--ATTTATATGCGAT
gi|6 : TTTT-TGTGCGAAAATTCTT---TTG----TAGGTTCGAT--AAATCTA-G-A--TTTACCGGTGTAT------ATTCGATCGCATATAAATTAGAG---TTTGCCA-----A-------GTATATAT--CAAGAG-----------CTAT---AAA-------ATGTACA------TCAATATTTCT----TAAATATAAAAA------AGATTTAT------CAA---ATATAAA-------AATT--CAAA-ACATA-GAAA--CCAA-GGTTTAT--TGAAT--AT--AAA-TCAAG--------------------------------------C--G--------------TTTTGCACATGAATACTAAGATTATCGAATATAG-------ATTTAGATTTAT---TGAATGT----------A----CATC--------AAAATTCGTTG-AATAT-----GC-------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttATA-TT-CA-CTAA-------AT----------------C--TTG---AT-TACCAGTATATTCA-TGGGAAA-A----------TCT-TTTATTA-ATG-TT----CG----ATAA-TCTTG--TAATCTATATAC------------ATTCTTG--------A-T-----TTTCATAT----GC---G-AAAAA-TCTGG-ATTTATATTCA-----ATA-A-TCTTGTTGTTTATA---------TGCAAAGAGTTTTG----GTT-TAC-------ATAAGA--TAACCGTATT--GATTAT--A-TATGTGCGAATAGTTTGATAAATCTTG------TTATC-TATATGCAA-AAATG--TTGAGTTA--TACTCC-AT-A------ATCTTGT-TACTGAAATGCGA--AATATATATTCGACAAT-CTTGTTTC-ATTTTT-ATTTatc
gi|8 : tgatatacctgtatattcactaaatcgtgatgtaccagtCATGACGTGTAAAATGATGCAATG-TTACA-C-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGCAAAA-AAAAATAAAAATCT-TG-ATCT-GTA-TTTTCTCGTTCCATA-----TA--TTTTTTATATGCCTTTG---A--AA---TTG--------A-AAGCCACT--GTAT----TCTCTGTGTGT--TCTTG-GT-----TTCTAACCAATA-A-T-----------CA---------TGTGAC--------------C-CAT-------ATGTGG---AA--ATCTT--CATT-A--G-TA-----------TTCGAT-AATTTGG------TTATTTCTTCAGTAA-AAATC--TTGTTTTA--T-TTCG-AT-A------ATCTTTA-TATCTATGTGCGA-AAAT-----CTTGATatatc
gi|8 : gggtaG-----CAA---AAATAAGTAA-AA-AATT-TC----AC---TGTCA--C--GGAGTTTAT---GAAT--A----AA-TCAAGATT------------------------------------------------------TTCGCACATAGATATAAAGATTATCGAA-ATAA-------AACAAGATTT-TTACTGAA-------------G----AAAT---------AA---C----CAA-ATTAT-CGA-------ATACTAATttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgttcttggtttctaaccaataatcatgtgacccatatgtggaaatcttcATGGCGTGTAAAAAGTTGCAGTG-TTGTA-C-AG-------AT----------------G--TTG---AT-T-------TAT--A-TGCAAAA-A----------TAT-TC-ATCT-GTA-TT----CG----ATAA-TTTTA--TCGTTTATATGC----G---A--AAACTTCGATAAAGTTA-T-----CT--ATGT----GC---C-AAAA--TAT---TT----ATTT------ATACA-T-----------CAATAATATCGTGTGTAAAAGGTTGCAATA-T-TATATAAATCATTCGA--TAAT-ATTTT--AATTAT--A-CAAT---------TTTGAT-AATCTTG------CTATG-TATATGCAA-AAATA--TTTATTTA--TATCTGAAA-A------ATCTAGA-TA--GATATTCGAg
blockSeqs : A A A T ATGATTTATATTCCATAAT GTT C ACCAGTA TC A T AAAATAAAAA A T T A TTCTCGTTCC A GTT C CTTTG TT ATAAAGTT C AGCCA TC ATAA TCT T ATCTGGATTTATATTCAATAATCTTGTTGTTTATA G A AA CAATAT ATAAATC GTC TTT CC G TTA TCA A TGTGCGAATAG A TTACATG T G T CT NN GC GA A TATTAC AA T G AATATATA G C G CATTTTGT ATATTTAA T G A A AC AT GTTAA G ATGTATTTGATAATCTCGCT TAA TGTA A C CCATTAAT TGCAACATA A A ATATTGG AG G TT T . T TA TGGAA T T C A T A T T A T TA GTAC T T GG C T TGTGATGTA TAT TT AAC GT TTT AC TAAATTCGAT TAATT CC T AAACGGC GCGATACTAA T G CGC CGGTAATCTTGTTGCAAAAGAT A A AAA T TTAAA TCTTCATG T G GC A TTCTTAGATCATCA A TCAA C T C TG CCGGTGTATATTCGATCGCATATAAATTAGAGTTTGCCAAGT TTC TCTTGTTTTTTT CGATTTCGGT AA CATATA T T A CGCA T T CATTG C TAATTC TTTTCAAAATTTGCATGTCTA AT CAAG ATT ATTG C TTTCGTTTATGAATATTGATAAAAC G A TTTAAAT A TTAC C TATGATTAACAAGAAAACGGCGTGTA ATT G A TAATTAT C C T T
blockSeqs : G . A . TAATTATATC . . . . . . . . . . . CT . A T ATGC . . . . A . . . TATTTATTTATACATCAATAATATCG G T CT ATT . TTC T T T G AT . AT . A . N . . AT . A . . N N N NNNNN A . T TCATTTTT ATGC T C . . A TT TGTC A TTGGCAAACTCTA TCA . A . A TTAAT . A ATTATA AA G GA A . . . GCA T C . A T A T T . . GT TA . . . . . TTGATG . TT . T A T AATCGAT TAATT A T AACGC GCGATA C G CGC AGAAAATTTTTGAT T . AT . . CTCTAT T . TT T TTTAGTTGT G TA T . . . TATGCGAACATGTTTATGTGTATTCGATTGTGATGT T G GTGCGA AA . . A T . C A AAAC G CAA ACATCAAATCGAATACACA . GGA C CCAT . TTGTCAGTACTATACAATACAAT A A . T AT T AGGCTAAAT . G A . T . G A
blockSeqs : G . . . GTCCT . . . . . . . . . . . CG . T T G . . . . . . . . TCTTGGTTTCTAACCAATAATCA G T TC ATG . NNN T . N G AT . . . N . G . . AT . N . . T A T TGAAT A . A AAATCT C . A . . A CT TTA T ATAAATCTTG . . . . A TTA . T ATTTG A G A C . A . T C G CTAGT AAAT A . GAT GCGA T T T ATACAATGCAT A . AA . . TATT T . GC T TTCTTTTGT T C T . . . AATGCCGTTTAAGTTATTCGAATATGA T . TGA AC . . A T . A G CG G CAA TCGATAACTTAACGCATT . AA C AC . TATCAAATATAAAACAAGAG G G . A AT G TGTACATC . A A . T . A G
blockSeqs : A . . . GTC . . . . . . . . . . . CA . A C A . . . . . . . . TATGGTTATTCATTTA T A AA ATC . TTC T . T N T . . . G . A . . AG . G . . A T T AAAT . . T ATTT . . . C A A . A GA . T AT A . . . . C A A ATT . . G CA T G C CGGTAACC A . TA . . CCTT T . T A TTATCAC . A C . . . TATAGCAAAATGATATCAAATAGAA . . AAA . . . T C . A A . T GA GTAAAAAATTTCACTG . AA T AT . TATCGAATGGAG A T . T T G AGATC . A A . A .
blockSeqs : G . . . ATT . . . . . . . . . . . CG . T C G . . . . . . . . TTTTGATATTTATGCA G A GT ATG . TTC N . C A T . . . T . A . . TT . A . . A C G . A A . CA . . T CAT . . A . . . . A AAATTCAAAACATAG . A . A . CG A C . T T A GAAAT . G . . C
blockSeqs : A . . . ATC . . . . . . . . . . . CG . C A A . . . . . . . . TCTTGTTATTCCATA G C TC GTT . TAA T . A G N . . . T . A . . AT . C . . . T T . . G T G T . T T A . . . .
blockSeqs : G . . . ATA . . . . . . . . . . . TG . A T G . . . . . . . . CCTTGACATTCAAT G A TT AT . TGT T . C C T . . . C . A . . C . G . . . . G . . . A .
blockSeqs : . . . ATC . . . . . . . . . . . CA . T C G . . . . . . . . ATCCTCATACATA . C TT AT . TTC T . T A T . . . . .
blockSeqs : . . . ATC . . . . . . . . . . . CA . T T G . . . . . . . . ATCTTGATGCATA . A GG T . AT T . . . A . .
blockSeqs : . . . ATG . . . . . . . . . . . CG . A T A . . . . . . . . CTATTTATA . . . C . . . .
blockSeqs : . . . TT . . . . . . . . . . . TG . A T G . . . . . . . .
blockSeqs : . . . AC . . . . . . . . . . . CG . A T G . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . CG . T T . . . . . . .
blockSeqs : . . . . . . G . T . . .
blockSeqs : . . . . T .
blockSeqs : . .
blockSeqCons : ATT***** T** ATTT****** NT* TTA*** TGAACCCCG************* ATTTG*********** ACCGGT***** **** GAC****** GCGCA***** CGGTAATCAT***************** TTNTNTCGT******* CA** C***** CGA******** ATNATTCAAAATTTCACGN******* AT****
originalCons : CATGGCGTGTAAAACGTTGCAATA-TTATA-C-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGCGAAA-A----------TCT-TG-ATTT-ATA-TT----CG----ATAA-TCTTG--TTATTTATATGC----G---A--AAATCTTG--------A-T-----TT--ATAT----TC---G-ATAA--TNTCG-NT----ATTC------ATACA-T-----------TA---------TGCGANAAANNTTG----A-T-TAT-------ATTCGA--TAA--ATCTT--GATT-T--A-TA-----------TTCGAT-AATCTTG------NTATT-CATATGCAA-AAATC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATAAAT-----TTTGATAAT-TTTGNTAC-ANTTTG-ATTTTTATGC----GATAATNTTGAT-TTA-TATGCGA-TAA-T-CTTG-TTTA-TATNTAC-T------GATAA-TCT-TG--ATTTATATTCGATNATCTTGT----TATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATNTATATGCGAA---TTT-TTATGTATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTAAATTACATTCTATGACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAN--ATTTTGATTTATAT-NCGATAA-CTTCGATAATCTTGATAATTCATATTCGA-C-ATAATCTT----G--GCATTTATATGCGATA----AATCTTGATT--CATATTCGAT-AATC-T-----------AT---TTATATT-CGAT--A-TCTTGTT-AT-----TTATATTCGATAA-CT-T-ATTGTTATTTA-TATTCGATAATTCTT---TCGATC-TATATNCGAT--AAATCTT-G-A--TTTA------TAT------A----ATCGCATATAAGTTA-AT---TNTGC-A-----AT----ATGNATATAT--CAAGA------------TTAT---CGA-------ATATAAA------TCAA-ATTTNT----CNAATATAAANA-CA---AGATTNTTG-----CAA---ATATAAATATCAA-AATT-TCGAATACATACGTAA--C--A-AGTTTAT--CGAAT--AT--AAA-TCAAGATT-T------------C-G---------A-T------C--G-------AT-----TTTCGCATATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTTGCAATATTATACGA-------ATCTTGATTTAT-ATGCGAAAATCTTGATTTATATTCGATAATCT
finalCons : CATGGCGTGTAAAACGTTGCAATA-TTATA-C-AA-------AT----------------C--TTG---AT-T-------TAT--A-TGCGAAA-A----------TCT-TG-ATTT-ATA-TT----CG----ATAA-TCTTG--TTATTTATATGC----G---A--AAATCTTG--------A-T-----TT--ATAT----TC---G-ATAA--TNTCG-NT----ATTC------ATACA-T-----------TA---------TGCGANAAANNTTGATT-----TAT-------ATTCGAT--AA--ATCTT--GATT-T--A-TA-----------TTCGAT-AATCTTG------NTATT-CATATGCAA-AAATC--TTGNTTTA--TATTCG-AT-A------ATCTTGA-TATTTATATGCGATAAAT-----TTTGATAAT-TTTGNTATTT------ATTTTTATGC----GATAATNTTGAT-TTA-TATGCGA-TAANT-CTTGTTA---TATNTACTGAACCCCG-------------ATTTATATTCGATNATCTTGT----TATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGATAATCTTGATTTG-----------CATTCGAT-A-ATCTTGATTAATATNTATATGCGAA---TTT-TTATGTATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTAAATTACATTCTATGACCTTGCTATTTATATGCGAAAATTNNGTTGTATA-TA-TGACAA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAN--ATTTTGATTTATAT-NCGAACCGGT-----AATCTTGATAATTCATATTCG----ATAATCTTGAC------ATTTATATGCGCA-----AATCTTGATT--CATATTCGGTAATCAT-----------------TTATATT-CGAT--A-TCTTGTT-AT-----TTATATTCGATAA-CT-T-ATTGTTATTTA-TATTCGATAATTNTNTCGT-------ATATNCGACA--AATCTT-G-A--TTTA------TAT------A----ATCGCATATAAGTTA-AT---TNTGC-A-----AT----ATGNATATAT--CAAGA------------TTAT---CGA-------ATATAAA------TCAA-ATTTNT----CNAATATAAANAC-----AGATTNTTGCGA--------ATATAAATNATTCAAAATTTCACGN-------TAA--C--A-AGTTTAT--CGAATAT----AAA-TCAAGATT-T------------C-G---------A-T------C--G-------AT-----TTTCGCATATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-T---CGNA-------------A----AAAC--------AAA---CGTTGCAATATTATACGA-------ATCTTGATTTAT-ATGCGAAAATCTTGATTTATATTCGATAATCT
Alignments
lowQualScore : 11111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111111 1111111111 11111111111111111 77777777777777777777777777777777777777777777777777777777777777777 11111111 1111111 111111 11111111 111111 222222222222 1111 1 00000000000000000000000000000000000000 1111111 11111 11111111 3333333333333333 111 11 11 11 2222 1 11 555555555555 1 1 444444444444444444 1 3333333 1 1111 3333333 1 11 1 111 3333333333333 111 11111 111 111 111 6666666666666666 1111111 1111 11 4444444444444 444444444 222 11111 333333333333 222 111111111 1 11 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 333333333333333333 111111 1 11111 1111 555555555555555555555555 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3333333 1 666666666666666666666666666666 111 111 333333333333 1
lowQualScore : 2 3 3 3 0 0000000 44 3 3 2 1111111111 2 2 2 66666 2 7777777777 5 666 5555 33 77777777 33 44444444444444444 444 6666 1 1 66 22222222222222222222222222222222222222222222222222222222222222222 11 11111111 3 88 55 6666666 4 1 4 4 66 1 0 66 66 4 222222 777 66666666 3 444444 5 1 6 1 222222222222 3 7777 6 1 5 5 0 2 44444444444444444444444444444444444444 33 4444444 6 77 44444 99999999 77 5 1 8888888888888888 000 3 88 3 22 11 1111 0 0 33 444444444444 55 1 0 5 3 777777777777777777 0 3 0 2222222 5 0 22 3333 2222222 0 5 33 0 000 5 3333333333333 444 11111 444 444 222 5 11 5555555555555555 5555555 7777 8 88 1111111111111 1 111111111 7 6 000 00000 999999999999 6 444 6 1 888888888 0 0 1 6 33 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 7 9 6 1 000000000000000000 999999 3 4 1 55555 4444 1 111111111111111111111111 1 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 3 1 7777777 1 7 7 222222222222222222222222222222 111 6 3 444 0 000000000000 1 0 2 4
lowQualScore : . . . . . ....... .. . . . .......... . . . ..... . .......... . ... .... .. ........ .. ................. ... .... . . .. ................................................................. .. ........ . .. .. ....... . . . . .. . . .. .. . ...... ... ........ . ...... . . . . ............ . .... . . . . . . ...................................... .. ....... . .. ..... ........ .. . . ................ ... . .. . .. .. .... . . .. ............ .. . . . . .................. . . . ....... . . .. .... ....... . . .. . ... . ............. ... ..... ... ... ... . .. ................ ....... .... . .. ............. . ......... . . ... ..... ............ . ... . . ......... . . . . .. . ........................................................................................... . . . . . .................. ...... . . . ..... .... . ........................ . ................................................................................................................................ . . . ....... . . . .............................. ... . . ... . ............ . . . .
lowQualScore : 2 3 3 3 3 8888888 66 3 3 9 7777777777 7 7 7 77777 5 0000000000 0 666 3333 77 00000000 99 22222222222222222 444 5555 0 2 88 33333333333333333333333333333333333333333333333333333333333333333 66 77777777 6 66 00 4444444 0 0 4 4 11 0 2 11 66 4 888888 888 33333333 6 000000 7 7 7 0 333333333333 8 0000 0 0 7 7 7 1 33333333333333333333333333333333333333 55 3333333 7 99 33333 33333333 99 7 4 2222222222222222 000 2 77 2 88 00 2222 0 2 88 222222222222 88 0 0 5 2 222222222222222222 2 0 5 5555555 8 0 00 5555 5555555 0 8 88 0 555 8 5555555555555 000 66666 000 444 000 0 88 0000000000000000 8888888 0000 0 66 8888888888888 4 222222222 3 7 555 44444 111111111111 7 333 7 0 111111111 8 6 7 7 77 0 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 3 8 7 0 333333333333333333 222222 3 0 0 22222 2222 0 888888888888888888888888 4 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3 0 7 1111111 0 1 5 000000000000000000000000000000 777 7 2 000 8 222222222222 2 0 0 7
consensus : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TGA-T-T-----TAT-ATT----CG----ATAA-TCTTG--TTA----TTTAT--ATGC----G---A--AAATCTTG--------A-T-----TT-ATAT----TCGATAATNTNGNTATTC---ATACA-T-TA---------TG--CGANAAANNT-TG--AT-TT--AT-------ATTCGA--TA--A-ATCTTGATT-T--ATA--TTCGATAATCTTG------NTATT-CATATGCGA-A-AAT--CTTGNTTTA--TATTCG-AT-A------ATC---TTG-A-TATTTATATGCGATAAATTTTGAT-AAT-TTTGNT--AT---TT---ATTTTTATGC----GATAATNTTGAT-TT-ATATGCGATAAATCTTG--T-TA-TATNTAC-------T----GA--ATCTCG--ATTTATATTCGATAATCTTGT----T--ATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATTTATA--TGCGAA----TTTTT-ATGCATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTA------AAT--------TACATTCNATAACCTTGCT-------ATTTATATGCGA-AAATTTTGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAC--ATTTTGATTTATATAC--GG--AA--TC--GGTAATCTTGATA-ATTCATAT----TCG-ATAA-TCTT----G---A--CATTTATATGCGA--C--AAATCTTGATT--TATATTNGAT-AAT-C----AT---TTATATT-CGAT-A-TCTTGTT-ATTCATATTCGATAA-CT-T-ATCGTTATTTA-TATTTGATAATCTT---T---TCGT--ATATTCGA-NAAA--TCTTG-ATTTA------TAT------A----ATCGCGTATAAATTA------TNCG--A-A--TATGAATATATCAAGA-TTATCGA-------AT---------ATAAA------TCAA-ANTTNTCG----AATAT----AAAAA---CAA----GATTGTTG-----CGAATATAAACAATTCAAA---AT----T-N-C----ACA---N---TAAC--AAGTTTAT--CGAAT--ATAA--A-TCANGATT-T------------CG---------A-T---C-----G-------AT-----TTTCGCATATAAATANCAAGATTATCGAATATAA-------ANCAAGATTTATCGNA-------------A----AANC--------AAA---C-GTTGCAAT---ATTACACGA-------ATCTTGATTTAT-ATGCAAAAATCTTGATTTATATTCGATANTCT
Reference ( family-142 ) : CATGGCGTGTAAAACGTTGCAATA-TTAT-A-CAA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TGA-T-T-----TAT-ATT----CG----ATAA-TCTTG--TTA----TTTAT--ATGC----G---A--AAATCTTG--------A-T-----TT-ATAT----TCGATAATNTCGNTATTC---ATACA-T-TA---------TG--CGANAAANNT-TG--AT-TT--AT-------ATTCGA--TA--A-ATCTTGATT-T--ATA--TTCGATAATCTTG------NTATT-CATATGCAA-A-AAT--CTTGNTTTA--TATTCG-AT-A------ATC---TTG-A-TATTTATATGCGATAAATTTTGAT-AAT-TTTGNT--AT---TT---ATTTTTATGC----GATAATNTTGAT-TT-ATATGCGATAANTCTTG--T-TA-TATNTAC-------T----GA--ACCCCG--ATTTATATTCGATNATCTTGT----T--ATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAT-ATGCGATAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGATTAATATNTATA--TGCGAA----TTTTT-ATGTATATT--CGGTAATCTTGTT----G--AAAGATTGATNTTC-GATAAATCTTGTTATTTA------AAT--------TACATTCTATGACCTTGCT-------ATTTATATGCGA-AAATTNNGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TG-------TATA---TTCGACAATCTTGTT-TNTTTA---TAT-TGCGAAN--ATTTTGATTTATATNC--G---AA--CC--GGTAATCTTGATA-ATTCATAT----TCG-ATAA-TCTT----G---A--CATTTATATGCG---C--AAATCTTGATT--CATATTCGGT-AAT-C----AT---TTATATT-CGAT-A-TCTTGTT-ATTTATATTCGATAA-CT-T-ATTGTTATTTA-TATTCGATAATTNT---N---TCGT--ATATNCGA-CAAA--TCTTG-ATTTA------TAT------A----ATCGCATATAAGTTA-A---TTNTGC-A-A--TATGNATATATCAAGA-TTATCGA-------AT---------ATAAA------TCAA-ATTTNTCN----AATAT----AAANA---C-A----GATTNTTG-----CGAATATAAATNATTCAAA---AT----T-T-C----ACG---N---TAAC--AAGTTTAT--CGAAT--ATAA--A-TCAAGATT-T------------CG---------A-T---C-----G-------AT-----TTTCGCATATAGATANCAAGATTATCGAATATAA-------ANCAAGATTT-TCGNA-------------A----AAAC--------AAA---C-GTTGCAAT---ATTATACGA-------ATCTTGATTTAT-ATGCGAAAATCTTGATTTATATTCGATAATCT
gi|1 : CATG-TATGTAAAATGTTGCAATA-TTAA-A-CGA-------ATC--TTGAT-TTAT-ATGCGAAA-A----------TCT-TTA-T-T-----TAT-ATT----TG----ATAA-ACTTG--TTA----TTCAT--TTGC----G---A--AAATCTTG--------A-T-----TC-ATAT----TCAATAATATGAATATTT---ATACAGTGTA---------TG--CGATAAATGT-TG--A--TT--AT-------AAGCGA---A--A-ATCTTGATT-T--ATA--TTTGATAATCTTG------TTATT-CATTTGCAA-A-AAT--CTTGTTTTA--TATTCA-AT-A------ATA---TGG-A-TATTTATATGCGATAAATGTTGAT-AAT-TCCGGT--ACAAATTAG-ATTTTTGTGC----GATAATCTTGAT-TT-TTGTGCGATGA-TCTTGATT-TT-TCTTTAC------------GATGATCTTG--ATTTATAATTGATGTTCTTTT----T--ATTTATAT-TCAATA--A-----TCTTGT------TA--TCTAT-ATTCGATGATCTTGTTACATGTAT-A-TA-TATTTGAT-G-ATCTTAACTAATATATATA--TTCTAAGATCTTGTT-ATACATATT--TGATGATCTTATT---------ATAT--ATATTC-GAT-GATCTTGTTA--TA------CAT-----------ATTCGATGANNNNNNN-------NNNNNNNNNNNN-NNNNNNNNNNNNNNN-NN-NNNN-------NN-NNNNNNNNNNNNN--NNNNNN-NNNNNNNNNNNNNNNNNNNNN----NN-------TATA---TTCGATGATCTTGTTATATATA---TAT-TCCAAAA--AATTTGATTTATA-AC--GGATAA--TCTTCGTACGCTTGATA-A-TCATATTCGATCG-ATAA-TCTT----G---A--TATTTATATGCGA--T--AAATCTTGATT--TATATTTAATGAAT-CTT--ATTTCTTATGTT-TGAT-ATTCCTGTT-ATTTATGATCGATAA----T-ATTGTTATTCA-TATTTGATAACCTTCCAA---TC-T--GTATTCGA-TAAA--TGTTG-ATCTA------TACACTGTAA----ATTGCATATAATTTT-T---TCCTGC-ATACTTATATACATATCAAGA-TTATCAT-------AT---------ATAAA------TCAAGATTTATCG----AATAT----TAATAG--CAA----GATTATTGAATATCAAATATAAATAA--CAAG---AT----TAT-CAAATACATACA---TAGC--AAGATTAT--GGAAT--GCAA--A-TCAAGAT----------------G---------A-T---C-----GCATTTTAAT-----TTTTGCTCATGAATATCAAGATTATTGAATATGA-------ACCAAGGTTT-TCACA-------------A----AAAT--------AAA---C-GTTGCAAT---ATTACACAA-------ATCTTGATTATT-ATGCAAAAATCTTAATTTATATTCAATAATCT
gi|10 : GACATGTGAAACGATTTAATA-TCAT--------------TT--TTGAT-TTAT-A--CGATATA----------TATATGA-T-----------ATT----CT----TCAA-TCTTG--ATG----TTCAT--ATGA----G---A--AAATCTTG--------A-T-----TTAATATATAATCGATAATATGGTTATTC---AT----T-TA---------C---CAAAAAAAA------A------AT-------AATAAA--TA--A-A---------T--AAA--TTCGATGATCTTGTTACATGTATT-CATATGCGA-A-AAT--CTTAC---AGCTGTTCA-AT-ATATTACATC---TTG----ATTGGTATGCGA
gi|11 : CAAGATTAT------------CG---------AAT---G-----G-------AG-----AT--GCATATAGATAACATGATTATCGAATACAA-------AACAATATTT-TCCCATATGATTAACAAGA----AAACGGCGTGTAAAA---T-GTCGCAAT---ATTATATAATAATTATATCCTCATGTAT-ATGCGAAAATCTTGATTTTTATTCGATATTCT
gi|11 : agACGGCGTGTAAAATGTCGCAATA-TTAT-A-TAATAATTATATC--CTCAT-GTAT-ATGCGAAA-A----------TCT-TGA-T-T-----TTT-ATT----CG----ATAT-TCTTG--TC---------------------------AAATCTTC--------A-A-----TC-ATAT----TCAATAATtgtcaaatcttcaatcatattcaataatc
gi|12 : agcaagattatcgaatggagatgcatatagataacatgattatcgaatacaaaacaatattttcccatatgattaacaagaaaTGCAAAACGTTGCAATG-TTGT-A-CAA-------A-C--ATCATCCCAT-GTGCGATA-A----------TCT-TGA-T-T-----TAT-ATC----CA----ATAA-TCTTG--ATA----TTTCT--ATGC----A---A--AAACTTTG--------A-T-----TT-ATAT----TTGATAACCTTGACATTC---A---A-T------------TG--C-ATATTCTT-TG--AT-TT--GT-------AGTCCATTTA--A-ATGTTGA-T-T--GTA--ACCGATAATCTTT------ATATT-Cc
gi|13 : ct-------TGTA---GTCGATAATCTTGGT--ATTTA---TAT--GCGAATTTATTTT---TCATATTC--G---A---CT--AGTAATCTTGA-A-AT--ATAT----TTG-CCAAATTTT----G---A----TTCATATGCGATACTAAAATATTGATT--TATATTCGGT-AAC-C--------------TT-CGAT-ATTTTTGTT-ATCTATATTCGATAA-
gi|14 : AT-ATT-----G----ATAA-TCTTA--TTA----TTTAT--ATGC----ATGCA--AAATCTTA--------A-T-----TC-ATAT----TTGATAA-ATC----CTC---ATACA---TA---------T----GGTAAATCT-TG--AT-GT--AT-------ATTCGA--TC--A-ATTTTGATG-TCAATA--TTt
gi|15 : GTGTAAGACGTTACAATA-TCAT-A-CAT-------GTC--TTGCT-TCAT-ATGCGAAA-A----------TCT-TGC-T-T-----TAT-ATT----CG----ATAA-TTTTG--ATA----TTTAT--GCAA----A---A--AAAAATTG--------A-------TT-ATAta
gi|16 : cactacttatatT-TT-ATATGCGATAAACCTTG-----A-T-TCTTC------------------------ATTTGCATTCAATAATCTTGT----T--ATCTATAT-TCAATA--A-----TATTGT------TA--TTTAT-a
gi|17 : gtTGAT-TT-ATATGCGATAAATCTTGG-T-TAATATGTAA-------T----AA--ATCTTG--ATTTGTATTCAATAATTTTGT----T--ATCTATAT-TCGATA--A-----TCTTGT------TA--TTCAC-ATcaactataaacattaaca
gi|18 : TGGCGTGTAACACGTTGTAATA-TTCT-A-C--------------------------------G-A----------TCT-TAA-T-T-----TAT-TTC----CG----ATAA-TCTCT--TTA----TTCAT--ATGC----G---A--AACTCTTG--------C-T-----TT--TAT----Ta
gi|19 : ATGAAGTGTAACACGTTGCAACAATCCT-A-CCA-------ATT--TTGAT-TTAC-AGGTGCAA-A----------TCT-TGA-T-T-----TAT-ATC----------ATAA-AC-CG--TTA----Tagcga
gi|2 : cgtAATAT---TA--TACAAA----TCTTG-ATTCATATG--CGAAAATCTT-------------GATTTGCATTC-GAT-AATCTTGATGTTTATATGCGAATTTTTTATGTATATTCGGTAATCTTGTTGCAAAAGATTGATTTTCGATAAATCTTGTTATTTA-AA-TTACATTCTATAA-CCTTGCTATTTAT--ATGCGA-AAA--TTTA----------GT----TG-------TATA---TATGACAATCGTG-A-TGTTTA---TA--TGCGAAC--ATGTTTATGTGTATTC--G---------------ATTGTGATGTAT--ATAT----TCC-ACAA-TCTT----GTTTT--TTTTTATGTGCG---A--ACATTTTGATT--TATATACGGT-AA----------------ATT-CGATAA-TCTTGTA-ATTCATATTCGATAA-CT-T-AACG-CATTTA-AAT----CAAACTT---T---TCGC--ATATT-GA-T--A--TCAAG-ATT----------------------ATCAAATATAAAACA-AGAGTTATG--G-A--TATGAATA-ACCAA-A-TTATGGA-------AT---------ATAAA------TC---ATTTGTAT----AATAT----attta
gi|2 : cgtgtaaaacggtgcA--A-----TCTTG--------A--TTCAT-ATGCGAAAATCTTG--------AT-T-TG-CATTCGAT-A-ATCTTGAT----GTTTATA--TGCGAA----TTTTTTATGTATATT--CGGTAATCTTGTT----GCAAAAGATTGATTTTC-GATAAATCTTGTTATTTA------AAT--------TACATTCTATAACCTTGCT-------ATTTATATGCGA-AAATTTAGTTGTATA-TA-TGAC-------AA-TCGTGATGTTTAT--ATGCGA-ACATGTTTATGTGTATTCGAT----TGTGATGTATATA---TTCCACAATCTTGTT-TTTTTT---TATGTGCGAAC--ATTTTGATTTATATAC--GGT-AAATTC--GATAATCTTG-TA-ATTCATAT----TCG-ATAA--CTT----A---ACGCATTTAAAT------C--AAA-CTT--TTCGCATATTtgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattataca-AAT-G----AT---TTATATT-CCAT-AATTTGGTT-ATTCATATCC-ATAA-CT-C--TTGTT--TTA-TATTTGATAATCTT---GATATCA---ATATGCGA-AAAG--T-TTG-ATTTA---------------A----AT-GCGT-TAAGTTA-------TCG--A-A--TATGAAT-TA-CAAGA-TTATCGA-------ATTTACCGTATATAAA------TCAA-AATGTTCG----CACATAAAAAAAAA---CAA----GATTG-TG------GAATATATACA--TCACA---ATCGAAT-A-C----ACA---T---AAAC--ATGT---T--CGCAT--ATAAACA-TCACGATTGT------------CAT--------A-TATACAACTAA-------AT-----TTTCGCATATAAATAGCAAGGTTATAGAATGTAATTTAAATAACAAGATTTATCG-A-------------A----AATC--------AAT---CTTTTGCAACAAGATTAC-CGA-------ATgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatATATTATAC-AATGC----AT---TTATATTACCAT-A-TTTGGTTTATTCATATCCAATAA-CTCT-AT-GTT--TTAGTATTTGATAATTCT---TAGATCATCAATATGCGA-AAAG--T-TTG-ATTTA---------------A----ATGCCGTTTAAGTTA------TTCG--A-A--TATGAAT-TA-CAAGA-TTATCGATTTCGGTAT---------ATAAA------TCAA-AATGTTCGCACCAGTTT----AAAAAAAAC-A----GATTGTTG------GAATATATACA--TCAAATCGAA----T-A-C----AC----A---TAAC--A--TGTGT--CGCATCCATAA--ACTCACGAAT-TGTCAGTACTATACA---------A-TA--C-----A-------AT-----TTTCGCATATA-ATAGCAAGG-TATAGACTGTAATTTAAATAAAAAGATTTATCGGA-------------A----GATC--------AAtgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttagatcatcaatatgcgaaaagtttgatttaaatgccgtttaagttattcgaatatgaattacaagattatcgatttcggtatataaatcaaaatgttcgcaccagtttaaaaaaaacagattgttggaatatatacatcaaatcgaatacacataacatgtgtcgcatccataaactcacgaattgtcagtactatacaatacaattttcgcatataatagcaaggtatagactgtaatttaaataaaaagatttatcggaagatcaatctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|2 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaA--A-----TCTTGG-------A--TTCAA-GTGCAAAAATCTTG--------ATAT-TGGCATTCGAT-AGATTCTGAT--A-GTTCATAATTGCGAA----TTTTT-ATGTATACTTACGGTAATCTTGTTTGGAA--AAAGATTGATCTTCCGATAAATCTTTTTATTTA------AAT--------TACAGTCTAT-ACCTTGCT-------A-TTATATGCGA-AAATTGTATTGTATAGTACTGAC-------AATTCGTGA-GTTTATGGATGCGACACATG-TTATGTGTATTCGATTTGATG-------TATATATTCCAACAATCTGTTT-TTTTTAAACTGG-TGCGAAC--ATTTTGATTTATATACCGA---AA--TC--GATAATCTTG-TA-ATTCATAT----TCGAATAA--CTTAAACG---G--CATTTAAAT------C--AAA-CTT--TTCGCATATT-GAT-GAT-C----tctttttccaaacaagattaccgtaagtatacataaaaattcgcaattatgaactatcagaatctatcgaatgccaatatcaagatttttgcacttgaatccaagattc
gi|20 : cgtgtaaaacggtgcaatattatacaaatcttgattcatatgcgaaaatcttgatttgcattcgataatcttgatgtttatatgcgaattttttatgtatattcggtaatcttgttgcaaaagattgattttcgataaatcttgttatttaaattacattctataaccttgctatttatatgcgaaaatttagttgtatatatgacaatcgtgatgtttatatgcgaacatgtttatgtgtattcgattgtgatgtatatattccacaatcttgtttttttttatgtgcgaacattttgatttatatacggtaaattcgataatcttgtaattcatattcgataacttaacgcatttaaatcaaacttttcgcatattgatatcaagattatcaaatataaaacaagagttatggatatgaataaccaaattatggaatataaatcatttgtataatattgcaacgttttacagagagagagaggagatgaggaacgaagaagagaggagacgagttggcgtgtgtaacacgttggcaatattatacaatgcatttatattaccatatttggtttattcatatccaataactctatgttttagtatttgataattcttaGGCGTGTAAAACGTTGCAATA-TCAT-A-TAA-------ATC--TTGAT-TTAT-ATGAAAGA-A----------TCT-TGA-T-C-----TAT-ATT----CA----ACAA-TCGTA--ATA----TCTAT--ATGC----c
gi|21 : -------AT-----TTTCACATATAGATATCAAGATTATCGAATATAA-------ATCAACATTT-TCGGA-------------AGGCTAAAT--------AAA---C-
gi|3 : tttgaattaaaAAAACTTTGCAA-A-CTAT-AACAA-------ATA--T--AT-TTAT-ATGCAAAA-A----------TTT-TGA-T-T-----CAT-ATT----CA----A--A-TCT-G--ATA----TTCAT--ATGT----G---A--AAATTTTG--------A-T-----T---------------AA-----CTATTT---ATA----------------TG--CGAAAAAGTT-T------TN--NN-------NNNNNN--NN--N-NNNNNNNNN-N--NNN--NNNNNNNNNNNNN------NNNNN-NNNNNNNNN-N-NNN--NNNNNNNNN--NNNNNN-NN-N------NNN---NNN-N-NNNNNNNNNNNNNNNNNNNNNNNT-AGT-TTTGGTC-AT---TTTGTATTATTATGC----GATAAAGTTGAT-TA-AAATGCG-TAATTCTTG--T-TA-TATATACATGTATTT----GATAATCTCGCTATTCATATTCGATCATCTTGTTGTAT--ATCGATATCTTGATC--A-----TTATGTGCAACATA--TTCAT-ATGCGATAATCTTG--------AT-TATA-CATTCAATAA-ATCTTGATTTATATaaa
gi|4 : catgTGTAAAACGTTGCAATA-TTACAA-CAA-------GTCCTTTGAT-TTATAATGCGGAA-A----------TCT-CGGTT-T-----TGTAATT----CG----GTAA---TTGGTTTA----TTTTA--AGGC----A---A--AAATCTTG--------ACT-----TT-ATAT----TCGA-AATCTTGTTATTC------CA---TA---------TG--CGA-AAATCT-TG--AT-CT--CT-------ATTCGA--TATTT-TTTTTAATT-TA-ATA--TGCAGAGATTTTG--------ATT-CAAATGCGATA-AATTCTTTGATTTA--TATTTG-AT-G------ATT---TTGAA-TAATTAT---------ACTTTGAT-AATCTTTGTT--AT---TT---ATTTTT---C----GATAATCTTGATATTAATATTCAACTAACCGTG--TGTC-TATTTAC------------------------ATGTATATTCAA-----TTGA----T---TTTATAT-TCGATACCATTAATTTTTGT------TAATTTTATAATTCGATAAATTTA--------AT-------ACTCGAT-A-ACCTT--TGAATATCAATA--TGCGAt
gi|5 : --------AAA---C-ACTGTATT---ATTATATAA-------ATCTTGATTTAT-ATGCAAAAATCTTGATTTATATTTGATAGTTT
gi|5 : aaataAATTTGGATT--GATTTTAGAA-AAT-TTTTGAT---TTATATT-TGATTA-TCTTGTT-ATTTATATTCGGCAATCT-TCATGATTATT-G-CATT---TAATTAT--------CAC--ATA-CCAATCAAAATTTTTGCAAGTA------TAT------A-------GCA---AAATGA------TATCA-A-A--TAGAAATATATCAAGA-TTATTGA-------AT---------ATAAACATATATAAA-AATTTTCA----CATAT----ATAGA---C-ATTGAGATTGT-------CGAATATAATT--TTCAAA---AT----T-TGC----ATG---TCTATATC--AAGCTTATATTGAAT--ACAA--A-TTATGATT-TT-----------CGTTTATGAATA-T---T-----G-------ATAAAACTATCAAATATAAAT--CAAGATTTTTGCATATAA-------ATCAAGATTT-tatcaatattcataaacgaaaatcataatttgtattcaatataagcttgatatagacatgcaaattttgaaaattatattcgacaatctcaatgtctatatatgtgaaaatttttatatatgtttatattcaataatcttgatatatttctatttgatatcattttgctatatacttgcaaaaattttgattggtatgtgataattaaatgcaataatcatgaagattgccgaatataaataacaagataatcaaatataaatcaaaaattttctaaaatcaatccaaatt
gi|6 : aaataaaacactgtattattatatAAA-A----------TCT-CGA-T-T-----TAT-ATT----TG----ATAAATCTT----TA----TTTAT--GTTC----G---ATTAACTTTT---------A-T-----TT-CTGT----ACGATAA-ATC----TTG---ATGCA-T--A---------TT--CAACGAATTT-TG--AT-GT--AC-------ATTCAA--TA--A-ATCTAAATC-T--ATA--TTCGATAATCTTA------GTATT-CATGTGCAA-A-ACG--CTTGATTTA--TATTCA-ATAA------ACC---TTG----GTTTCTATGTTTTGAATTTTTAT-A---TTTGATAAAT---CT----TTTTTATATTTAAGA-AATATTGAT-GT-ACATTTTATAGCTCTTG-----A-TATATAC-------TTGGCAA--ACTCTA--ATTTATATGCGAT
gi|6 : TTTT-TGTGCGAAAATTCT---T---TTGT--AGGTTCGA-TAAA--TCTAG-ATTTACCGGTGTAT------ATTCGATCGCATATAAATTAGA---GTTTGCCA-A-----GTATATATCAAGAGCTATAAA-------AT---------GTACA------TCAATATTTCTTA----AATAT----AAAAA-----A----GATTTAT------CAAATATAAA-AATTCAAA---A---------C----ATA---G---AAACCAAGGTTTAT--TGAAT--ATAA--A-TCAAG----------------------------------C-----G--------------TTTTGCACATGAATACTAAGATTATCGAATATAG-------ATTTAGATTTATTGAATGT----------A----CATC--------AAAATTC-GTTG-AAT---AT-----GC-------ATCAAGATTTATCGTACAGAAATcgaatatacaccggtaaatctagatttatcgaacctacaaaagaattttcgcacaaaaaatc
gi|7 : aaaatctcgatttatatttgataaatctttatttatgttcgattaacttttAA-A----------TCG-TGA-TGTACCAGTAT-ATT----CA----CTAAATCTTGA-TTACCAGTATATTCATGG----G---A--AAATCTTTT-------A-T-----TA-ATGT----TCGATAATCTTG-TAATCTATATACA-T-T----------------------CT-TG--AT-TTTCAT-------ATGCGA--AA--A-ATCTGGATT-T--ATA--TTCAATAATCTTG------TTGTT-TATATGCAA-AGAGT--TTTGGTTTA--CATAAG-AT-A------ACCGTATTG-ATTATATATGTGCGA-ATAGTTTGATAAAT-CTTGTT--AT---CT---A----TATGC----AAAAATGTTGAG-TT-ATACTCCATAA-TCTTG--T--------TAC-------T----GA--AATGCGAAATATATATTCGACAATCTTGT----TTCATTTTTAT-Tatc
gi|8 : tgatatacctgtatattcactCATGACGTGTAAAATGATGCAATG-TTAC-A-CAA-------ATC--TTGAT-TTAT-ATGCAAAA-AAAAATAAAAATCT-TGA-T-C-----TGT-ATTTTCTCGTTCCATA-----TA--TTT----TTTAT--ATGCCTTTG---A--AA---TTG--------A-AAGCCACT-GTAT----TC-----TCTGTGTGTTC---TTGGT-T-TC---------TAACCAATAATCATGTG--AC-CC--AT-------ATGTGG---A--A-ATCTTCATT-A--GTA--TTCGATAATTTGG------TTATTTCTTCAGTAA-A-AAT--CTTGTTTTA--T-TTCG-AT-A------ATC---TTT-A-TATCTATGTGCGA-AAATCTTGAT-tatatc
gi|8 : gggta----------TCT-TGG-T-T-----TCT-AAC----CA----ATAA-TCATG--TGA----CCCAT--ATGT----G---G--AAATCTTC--------A-T-----TA-GTAT----TCGATAATTTGGTTATTT---CTTCA-G-TA-----------------AAA--------------------------------------ATCTTGTTT-T--AT---TTCGATAATCTTT------ATATC-TATGTGCGA-A-AAT--CTTGATT----TATTC--AT-A------AAC---TC------------CGTGACAG----TGA--AAT-TTT-TT--AC---TT---ATTTTTttattcataaactccgtgacagtgaaattttttacttatttttgcg
gi|9 : gggtacatgacgtgtaaaatgatgcaatgttacacaaatcttgatttatatgcaaaaaaaaataaaaatcttgatctgtattttctcgttccatatattttttatatgcctttgaaattgaaagccactgtattctctgtgtgtATGGCGTGTAAAAAGTTGCAGTG-TTGT-A-CAG-------ATG--TTGAT-TTAT-ATGCAAAA-A----------TAT-TCA-T-C-----TGT-ATT----CG----ATAA-TTTTA--TCG----TTTAT--ATGC----G---A--AAACTTCGATAAAGTTA-T-----CT-ATGT----GCCAAAATAT--TTATTT---ATACA-T-CAATAATATCGTG--TGTAAAAGGT-TGCAATATT--ATATAAATCATTCGA--TA--ATATTTTAATTAT--ACAATTTTGATAATCTTG------CTATG-TATATGCAA-A-AAT--ATTTATTTA--TATCTGAAA-A------ATC---TAG-A-TA--GATATTCGAgcg