lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111
lowQualScore : 11 1 1111 4444444444444444444444444444444444444 1111 777777777777777777777777777777 2222222 111111111111 111111111 333333333333333333333 33333333333 222222 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1111 1 666666666666666666666666666666666666666666666 11 22 55555555555555555555555555555 3333333333333 111 111 9999999999999999999999999999999999999999999999 5555555555555555555555555555555555555555555555555555555555555555555555555 111111 1 999999999999999999999999999999999999999999999999 111111 11111 1 222 11 22222 33 222222222 55555555555555555 1 1 7777777777777777777777777777777777777777777777777777 1111 11 11111 111 1111111111 5555 1 22 1 1 1 777777777777777777777777 222 11 33333333333333 11 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 11 33333333333333333 11 22 111 22222222222222222222222222222222 3333333 1111111 1111 44444444444444444444 333333333 11111 1 111111 1111 111
lowQualScore : 11 4 1 2222 1 3333333333333333333333333333333333333 666 2222 88 999999999999999999999999999999 4 0 0000000 0 888888888888 888 888888888 999999 66 555555555555555555555 0 7 1 4 2 7 99999999999 666666 4 4 4444444 777 44444 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 4444 0 7777 555 111111111111111111111111111111111111111111111 4 9999 999999 55 4 99 777 00 888 44444444444444444444444444444 44 5 1 1111111111111 555 5 5 333 0 2 1111111111111111111111111111111111111111111111 7 5 3 1 3333333333333333333333333333333333333333333333333333333333333333333333333 3 1 6 999999 7 6 5 7 5 444444444444444444444444444444444444444444444444 5 666666 1 3 11111 3 2 5 555 4 2 88 11111 1 2 00 666666666 3 1 66666666666666666 9 7 1 5 6 1111111111111111111111111111111111111111111111111111 2 9 4444 11 66666 1 77 111 666 1 6666666666 3333 0 7 5 8 11 88 3 6 3 0 0 11 5 000000000000000000000000 3 8 6 222 00 00000000000000 5 11 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 9 44 5 0 11111111111111111 11 6 6 99 5 777 6 99999999999999999999999999999999 0000000 4 4444444 3 66 2 3333 33333333333333333333 2 4 5 111111111 1 55555 7 5 4 777 2 55 111111 5 5555 8888 77 4 0 77 111 4 6 55 6 4 3 2
lowQualScore : .. . . .... . ..................................... ... .... .. .............................. . . ....... . ............ ... ......... ...... .. ..................... . . . . . . ........... ...... . . ....... ... ..... .............................................................................................................. .... . .... ... ............................................. . .... ...... .. . .. ... .. ... ............................. .. . . ............. ... . . ... . . .............................................. . . . . ......................................................................... . . . ...... . . . . . ................................................ . ...... . . ..... . . . ... . . .. ..... . . .. ......... . . ................. . . . . . .................................................... . . .... .. ..... . .. ... ... . .......... .... . . . . .. .. . . . . . .. . ........................ . . . ... .. .............. . .. .................................................................................................................. . .. . . ................. .. . . .. . ... . ................................ ....... . ....... . .. . .... .................... . . . ......... . ..... . . . ... . .. ...... . .... .... .. . . .. ... . . .. . . . .
lowQualScore : 55 0 6 1111 4 3333333333333333333333333333333333333 111 1111 00 111111111111111111111111111111 4 1 9999999 1 000000000000 888 666666666 444444 99 444444444444444444444 2 0 5 8 2 4 77777777777 222222 4 4 0000000 000 22222 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 2222 4 9999 222 888888888888888888888888888888888888888888888 2 4444 222222 66 4 77 888 99 888 00000000000000000000000000000 11 7 0 4444444444444 111 7 7 777 3 8 1111111111111111111111111111111111111111111111 1 4 7 4 5555555555555555555555555555555555555555555555555555555555555555555555555 7 7 5 111111 3 7 3 3 7 111111111111111111111111111111111111111111111111 4 444444 9 9 00000 5 5 7 777 3 2 33 00000 0 5 00 777777777 5 0 00000000000000000 3 0 0 3 0 6666666666666666666666666666666666666666666666666666 2 2 2222 55 77777 7 77 333 000 0 5555555555 7777 8 8 0 2 44 66 0 0 2 8 0 88 0 000000000000000000000000 8 2 0 000 88 88888888888888 0 00 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 5 22 0 4 33333333333333333 44 7 7 88 0 888 7 00000000000000000000000000000000 1111111 4 4444444 7 11 4 0000 77777777777777777777 4 0 3 222222222 1 44444 6 4 0 000 0 55 555555 2 3333 3333 22 5 7 22 000 0 4 55 2 0 0 1
consensus : AAAA-GAAACGCAANTTCGGATT----TTGTAATATAAC-TTTAGACACGTG-GAC-AA-A--TTNTA----TTA-A-ATCT----GACACTGANCTAC-----------TTCCG--NGCGCTGTGAAAA-TGTTCTTCAG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCAGA-----TTTTTCAAGAAAGCGTGCATCCGGGGTACTCC---TGCA-CC-TATGTG----CTGGTAAA-TCA-T---N---A---CAA-ATC-GAAC----A-------TNNG-AAC----A--C--T--AC-AAATCAT----C--T-------A----------C------------TTT------A--A--GCGATTG---T--AGAGCGAAAT---GCCGCGATTGAATGAA---GTC-G-ATAN--GG----T-------------CT--G--ATAATGCANGGGCATTCGCA----ACGTC--A---T-GT-AGCCC-AGCA---AT-ATGGTGT---ACATGNGGA--A---AC---AAT-----A-TTCCGTTTAGTTGG-GCGTCTCAGAGCC-------------ACAGGGAG-ATT-GA-T-GACCGTCCCAGGAGCGGAC-GCC----CGC-GCGTT--------ACG---TC--------AAGATAGAGGCGTACGTCTCTCGC-------------ACC-T-CCGTA------A-----------C-------GAC------------G------ACGGCACGCCAAGTTGTCGGCACTCAT----GGTCGGCCAGTGTGTCCAAGAACNGTTAGGAATCG-GTTGC-N-------GGGGTT---T---T--TAA----GG---CCACG-----ACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGTTTG--CA--T--GCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTGAC-G-------AG--TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATATTCTGACGCT---TGC----G----------------ATTCGGAGGAG----GGTCTGTTATG-----GTATGG-GCAGGG-ATATCTCAAGGC----GTGAA-AACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGAGACCACGCGTCCTTCCTCTTATCCATCAACGTA------------TAACCTT-ACGCTGCAGCAGGACAACGCGAT--GGCCCC-ATGTT----GNT----AGGGTTTGTCGTGA--TT-------------CAN----------CGTCT---CAGNTCTT---------------------GATTT-G--T----CCC---C--A-TC---GAG-------------C----ATTTGTGGGACGAG-C-TGGACAGGAGG---GTTAGGAAGC-GNGTCAACGTCNCATA-TAA-CGTCGCTCAACTCACGCAGGCCCTTATTC-AGG-----AGTGGAGG---ATA-CTCT----CAAAGGACAATA--AA---CACCTT-GATG-------GGGT--CAATGTTAAGGAGAGTAAGAGCAGT---------GACTGA-AGCCAGGGGTGGGNACACACGC--T--ACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTTT---AACGCTATT-CACGCAAACGCCGTC-TG---TGA-TAGGACA--ACAAAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( gi|2 ) : AAAG-GAAACGCAAGTTCGTATT----TTGTAATATAACGTTTAGACACGTG-GAC-AA-A--TTATA----TTA-A-ATTT----GACACTGATCTAC-----------TTCTG--TGCATTGTGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCAGA-----TTTTTCAAGAAAGCATGCATTCAGGATACTCC---AGCA-GCTTATGTT----TTGGTAAA-TCA-T---G---A---TAA-ATT-GAAC----A-------TATG-AAT----A--C--T--AC-AAATCAT----C--T-------A----------C------------TTT------A--A--GTGATTA---G--AGAGCGAAAT---ACCGAGATTGAATGAA---GTC-G-ATAG--GG----T-------------CT--G--ATAATACAAGGCCCTTTGCA----ACGTC--A---T-GT-AGCCA-AGCA---AT-TTGGTGT---ACATGCGAA--A---AC---AAT-----A-TCCCGTTTAATTGG-GCGTCTCAGAGCC-------------ACAGCAAG-ATT-GA-T-GACCGTCCTAGGAG-AGAG-GCC----TAG-GCGTT--------ATG---TC--------AAGATAGGGGCATATGCCTCTCGC-------------ATC-T-GCATA------A-----------C-------GAC------------G------ACGGCACGCCAAGTTGTCGGCACTCAC----AGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTTGT-T-------GGAGTT---T---T--T------GA---CCAAA-----ACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTG--CA--T--GCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAGAC-G-------CT--TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGGTGATTGATATTCTGACACT---TGC----G----------------ATTCGGGGAAG----AGCTTGTTATG-----GTATGG-GCAGAG-ATGTTTCAAGGC----ATGGA-AACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGAGATCGCAAGTCCTTCCTCGTATCCCTCAACATA---TTATGTTGTTAACC-T-ACGCTGCAGCAAGACAACGCGA---GGTCCC-GTGTT----GCT----ACAGTTTGCTGTGA--TT-------------CAG----------CGTCC---CAGTTCTT---------------------GATTT-G--T----TCC---C--A-TC---CAG-------------C----ATTTGTGGGAAGAT-C-TGGACAGAAGG---GATAAGAAAC-CAGTCAACGTCCCATA-TAA-CGTTCCTCAATTAACGCAGGCCCTTATTC-AGG-----ATTGAAGGA-AATAATTGT----CAACGGACAATA--AT---CACCTT-GATG-------GAGT--CAATGCTGAGGAGAGTATGAATAGT---------GACTGA-AACCAGGAGTAGGAAAACACAC--C--ACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTTA---AACGCTATT-CACACAAACGCCGTC-TG---TGA-TAGAACA--ACAAAAATCACCAAAAT-GTATTCAGTAATGATGAAATA
gi|3 : AAAGAGAAACGCAAGTTCGGATT----TTTTAATA-----------CACGTT-GATTAA-A--TTTAA----TTA-A-ATTT----GACGCTGAACTAC-----------CACCG--GGCGCAGTGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCATA-----CTTTTCAAGAAAGCGTGCATCCGGGGTGCTCC---TGCA-CCCTATGTG----CTGGTAGA-TCA-T---T---A---CAT-GTC-GAGC----A-------TTGG-AACTGGAA--C--TGTAC-AAATCAG----C--TTCGCAACATTT-------C------------TTT------ACCAT-GCGATTG---T--AGAACAAAAT---GCCGCGATTGCATGAT---GTA-G-AT----------T-------------CTCCG--ACAATGCAGGAGCATTCGCACGCAACGTC--A---T--T-AACCC-AGCA---AT-ATGG-GT---AAAAGGGGAC-A---AC---AATTAAATA-TTCCGTTTAGTTGG-GCGTCTCAGAGCC-------------ACAGGGAG-GTT-GAAT-GACTGCCCCAGGAG-CGAACACC----CAC-GCGTT--------ACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGT-------------GTC-T-CCGTA------A-----------CCAGCCG-GA-------------G------ACGGCACACCAGGCTGTCGGTCCTCAT----TTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTTGC-A-------GGAGTTCCAT---T--TAA----GG---CCACG-----GCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACA--T--GCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTG----ACGTCTTGTTCACTGAT-G-------AG--TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGGTGAGCGATATTTTGACGCA---TGC----GTAACGAAAAGCGACAAATTCGGGG-AG----GGTTTGTTATG-----GTATGG-GCAGGG-ATATCTCGAGGC----GTGAA-AACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGAAATCACGCGTACTTCCTCTTAACCATCAACGTA---ACA-----TTAA-------GCTGCAGCAGGACAACGCGAT--GCCCCC-ATGTT----ATT----AGGGTTTGTCGTGA--CTTTCTGGTTCAAAACAA----------CATCC---CAGTGCTTGATTGGCCACCATACAGTCCAGATTT-G--T----CCC---TA-A-TC---GAG-------------C----ACTTGTGAGATGAG-C-TGAACAGGAAG---GTTAGAAAGCGCA-TCAACGTCTTATA-TAA-CATTGCTCAACTCACGAAGGACCTTATTC-AGG-----A----------------GT--------GGATAATA--AA---CACCTT-GATG-------GCGT--CCATGTTAAGTAGAGCAAGAGCAGT---------GACTGA-AGCCAGGAGT
gi|1 : cggaAAAA-GAAACGCAAACTTGTTTTGAATTTGTAATATAACGTCCAGGCACATG-GAC-AATA--TTTTAAAAATTA-A-ATTT----GACATTGAGCTACGGTACATGTACCTCCG--TGCACTGTGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GCA--G-----TTTTTG--------------CAAGAGAGCGTGCGTCCGGGGTACTCA---TACA-CCATATGGG----CTGGTAAA-TCA-T---A---A---CAA-A-T-AAGCTACAA-------AATG-AA-----A--CAGT--AC-A-------------T-------A----------T------------TTC------------GCGGT--------AGAGCAAAAT---GCCGCGATTGANTga
gi|9 : ggaaAAAT-GAAACTTAAGTTCAGATT----TTGCAATATAGCTTTTAGACACGTG-GACGAA-A--TTTGA----TTA-T-TTTTTTTAGACA--GATCGAC-----------TTCCG--AGCTCTGTGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCAGA-----TTTTTCA------------TTCGGGGCACTCCTTCA-CA-AC--ATGTG----CTAGTAAA-TAA-T---T---A---CAA-ATC-GAAC----AATGGAACTGTGCAAA----G--C--T--GC-ACAACAT----T--T-------G----------T------------TTTCG----A--A--GCGATTG---T--AGAGCGAAAT---GCCGCGATTGAATTAT---GTC-A-ACAA--GG----TTAGGACCATTGCTCT--G--GAAATACGTGGGTATCAGCA----ACGTT--A---T-GT-ACCTC-AGCA---AT-ATGGTGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|34 : aaatactagcgggaaaAAAA-GAAATGCAATTTCTGATT----TTGTAATATAACTTTTAGACTCGTG-GAT-AA-AATTTA-A----TCA-AGGTTT----GTCA-TGA-CT-------------TTCTAGCTGAA----GAAAA-TGT
gi|26 : tactagtggaaaAAA-GAAATGCAAATTTGGATT----TTGTAAGAT-------------GTG-GGT-GA-A--AGATA------A-A-ATCT----GACACTGAGCT---------------CCA--AACACTGTAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GCT--GCTTCC----AGCAGA-----TTTTTTAAG
gi|13 : atatactagcaggAA-GAAATGCAGCTTCGGATT----TCGTAA---AA---TT-GAC------GA--AA-C--TTA-A----TTA-A-ATCT----AA-ACTGG-------------------------------GGAAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCAGA-----TTTTTCAGGAAAGCAAGCAAGCAGGGTATTTC---TGCA-TCATATATG----CTGATAA--TCA-T---T---A---CAA--CT-GAAC----A-------TTGG-AAC----A--G--T--AC-AAATCAT----C--T-------A----------CACAAGACTTTTTTTTG-----A--A--GCTGTTG---T--AGAGAGACATGC-ACCGA--TTGAATGTA---GTC-G-A
gi|4 : cGCAGATTCGGAAT----TTCTC-TATACAGCTTAGA-ATGTTTGTC-GA-A--T-ATT----TGATA-ATCT----AATAC-GATGTAC-----------TTCCG---GTTTTTTGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCTGC-TTTCAGGAAA-----CTTTACA-GAAAGCGCGCAATCGCGTTTATCC---TGCACATTTATGCT-------GTAAA-TCA-T---A---ACATTAATATTAGAAT------------TAT---AT----A--T--T---T-AACTCAT----C--C-------A----------T------------TTTGTTATGA--A--GTCTTTATTTGTTAGAGTGAATT---GCCGCGATTGAATGAA---GTA-A-GTAT--GG----T-------------TTA-G--AACATTCAAGGCA--TGGCA----ACGTC--A---T-TT-ATCCCTAACA---AA-ATGGTAC---TCATCAGAC--A---AC---AA-----------CGTATCGGTGG-GCGTCTCAGAGCA-------------ACAGGGGG-TTT-GA-TTAACCGTCCTAAGAG------------------CA----------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGTAACCGATT-TCACATATTTCGGA-----------C-------GAC------------GCCGGATATGGCACGCCAAGTTGT-GGCACTCAT----GATCGGTCATTG-----AA---CAGTTAGGAATCG-GTTGC-T-------GGGGTT---TCATT--TAA----GG---CCACG-----ACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTG--CA--TATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTGAT-G-------AG--TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTGTacgggaaaggaccatt
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GC-------TTGC----------TTTCAGCAAAGTATGCATCCAGGGTACTCC---TGCA-CC--ATGCT----CTGGTAAA-ACA-TTGAA---A---TAG-TTT-G--C----A-------AATC-A------G--C--C--AC-A---CAT----T--T-------C----------T------------TTT------A--GATGCGATTA---T--AGAGCGAAAT---Atttgac
gi|14 : tA-TGTTCTTCGC-TTAAA-T--TCAG------CGT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTT---CAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCT--TGCA-CC--ATATTGCCACTTGTAAAGTCAGT---GGAAA---TCA-ATT-CAGC-------------------T----A--C--A--AC-AAACTTT----C--C-------T----------C------------TTCGAA---A--G--GAAATTG---T--AGAGCGAAATGAAGTCGAAA-TAAAAGAG---AAC-T-ATTT--GC----T-------------CT--G--CTAATGCATGGGCATTTGCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACATGAAGATCA---AC---AAT-----
gi|29 : AAAGCATGCATACGGTGTACCAC---TGCA-CCATATGTG----CTGGTAAA-TCA-T---T---A---CAA-ACT-GAAC----A-------TCAG-AAT----G--G--T--AC-AAATCAG----C--T-------ATAAATTTTTTC------------TTG------A--T--TTGATTG---A--AGAGCAAAAT---GCCtctc
gi|24 : CTTC---ACCA----TATATG----CTGATAAA-TCA-T---T---A---CAA-ATC-AAAC----A-------TTGG-AGC----A--G--T--AC-AAATCAG----C--T-------A----------CACAACATCT---CTT----------------TT-----------CGAAGT---A-----ATTG--TGAA---TTC-G-ATAG--GG----T----------------------------AGGGCCATTGC--------TCTGA---T-GT-AGCCC-AACA---AT-ATGGTGT---ACATGCATA--AGAGACATGAAT-----ATTCCTCTTTGAATGG-ACctaaatggaaaag
gi|18 : ---A---TAA-AT--AAAC----A-------T-TG-GAC----A--G--T--ACTAAATTAC----C--T-------A----------CATGCACAAACATTCTGTCG--A--ACCATAATT----G--AG-GCGAGAT---CCCGCGATTGAATGAAGTGGTCGG-GTAG--GGATGCT-------------CT--GA-ATAATGCCTGG-ACTCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTAT-GTGGTGT---ACAT-TAGA--C---AC---AAT-----T-TCC--TTTAGTTGG-GCGCTTCAGAACCTTGGAGATAGTGAACTGCAAA-AGT-GA-T-GTCCG
gi|1 : -ATT-GAAC----AG------TAAA-AAT----AAGC--T--AC-AAA--ATGAAACAGT-------A----------CAAA---------TTT------C-----GCGGT--------AGAGCAAAAT---GCCGCGATTGAATAAA---GTC-G-ATA---GC----T-------------CT--GATATAATGTAAG-----TCGTA----AGGTC--A---T-GT-AGTCC-ACTA---AT-ATTGTGT---ACATG---A--G---AC---AAC-----A-TTCNG
gi|21 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgant------A--A--GCGATTG---T--AGAGCAAAAT---CCCGTGATTGATAGGG---GTT-GGACAATTGC----T-------------CT--T--ATAATGCAGGGGCATTTGCA----ACGTC--ATATT-GT-AACCT-AGCA---AT----ATAA---ACATGAG---------------------------GCTTAGTTGC-ACATCTCATAGCC-------------ACA------ATT-AA-G-GA--GACTT-GGA----AA-GCC----AAC-GCATTGCATGGCGACG---TC--------AAAGTAGACGCACACGTCTTTTGC-------------ACT-T-CCATA------A-----------C-------acattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : gTTCGTA----AGGTC--A---T-GT-AGCCC-ACTA---AT-ATTGTGT---ACATG---A--G---AC---AAC-----A-TTCAGATTAGTTGG-GGGTGTCAGAGAC-------------ACGGGGAG-ATTAGG-C-GGCCGCCCCAGCAGTGGAC-GCT----CGT-GCGTT--------ACG---TC--------AAGATAGAGGCATACGTCTCGTGC-------------ACT-T-CCGTA------ACCGATTTGAGGC-------GACGACATGTACGGGG------ACGGCACGCCACGTTATCGGCACTCGT----AGTCGGCCACCGTGTcaattt
gi|38 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngaca---AAT-----A-TTCCGTTTAGCTGGTGAATGT-AAAGCC-------------ACATGGAGTATG-GG-T-GACCGTCCAAGGAGCGGAC-GCCCTTGCAGTACGTC--------ACGACCTC--------AAGATAGAGcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|28 : tAGAACC-------------ACAGGAAG-ATT-GAGT-GACCATCCCAGGAGCGGAC-GCC----CGC-GCGTT--------ACG---TC--------------GTGACGTAAGTCTCTCGC-------------ACC-T-CCGTT------A-----------CAGATTCAGAC------------GGTG---ACGGCACGCCAAGTTATAGGTATTCa
gi|7 : -GCGTT--------ACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCG--------------ATCCT-CCGTA------A-----------CT------GATTCCA--------G------ATGACACACTAAGCTGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTTGC-G-------GGGGTT---T---TATT------GAAAGCCACA-----ACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTG--CACAT--GCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTGAC-G-------AG--TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGT--------TTGA-ATACCGAAAA-----GCGACAG----------------ATTCAAAGGAG----AGTCTGTTATC-----GTATTG-GGAGGA-AAACCTGAAGGCACAAATAAA-AACACCTCTCGTGGTTATtgtactctgataggacaa
gi|12 : agcggatgtccgcTAAAGACGTACGTCTC-CG--------------ATT-T--CA-G------A-----------C-------GGT------------G------ACGGCAC---AAGTTGTCCACACCCAT----GGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTAT-CAGTAGCAGGAGTT---T---T--CATTTTAGG---CCACA-----ACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAGA--ATGC-------------AGTGGCTGATTG--CA--C--GTGTTT---------CGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCGACAG-----------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTT---GTGA-TGATATTTTGACGCT---TGC----acatgcttgcgtaac
gi|27 : GTT-TTGGTACTCAT----GGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTTACAT-------GAGATT---C---A--TGTAA--GG---CCACG-----ACGTCTCTA------TGATGGCCCGCTACT----TACACata
gi|37 : tcaccaatttcagacgtcgtcggagaagtaacataaatTTGGTACTCAT----AGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATC--GTTAC-A-------TGAGATCCAT---G--TAA----GG---CCATG-----ACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|11 : AGTGTGTCGGAGTACTGTTACGAGTCG-GTTAC-A-------GGAGGT---TCA-T--T------GA-----AAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTGCACA--T--GCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGA--A-------CTAGTCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGGTAAGCAATATTCTGATTCT---TG-----------------------TTCAACGGAA----AGC--GATAGG-----G---GG-TCAGTT-ATG-TTCTAGAC----AGGGATAGGACCTCTCGTG-T--TTATCGATGACAATCTTGCAGCAGTGACTTATC
gi|1 : acaccaagtacatagcattgatgGCCACT-----ACACAGAGGCGATGCCAATGTCGAA------GATTGTTTG--CACGT--GCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTTAC-GAGTCTCACC--TCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGACG--ATAG-----G----TCTGACGCTGTATGT----A----------------A--CGGAAAAGCGACAGATCGGTAGGCGAAGGCATGTTACAGGGCATATTTTAAGGC----GTGAA-AACACCTCTCGTGGG---TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGAGACCACAGGTCCTTCCTCTTATCCATCAACGTA--------------ACT-TTACGTCGCA-TAGGAGAACGCGATCAGGCCCC-GTGTT----GGA----AGGCTTTGTTGTGACTTT-------------CTGACTGAAAACACGTCT---CAGATAAT---------------------TATTT-GGCC----TCCACGC--AGTC---CAGATCCCCCCTCGACC----ATTTGTTGGACGAA-C-TGAACA-AGGG---GTTTAGAAGT-GCGTCAACGTCACATA-TAA-CGT-----------CACAGGCCCGTATTC-TGG-----AGTGGAG-----TAG---------------CAATA--AA---TACCTC-GATG-------GGGT--CAATGTTAAGGAGAGTCAGAGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGC--T--ACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTTT---AACGCTATT--GTGCAAACGCCATT-TT---TGA-TAGAACA--ATAAAAAGCATCGAAAT-GTAT
gi|5 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaa----------------ATTCGGGGGAT----GGTCTGTTATG-----GTTTGA-GCAGGG-ATATCTCAAGGC----ATGAA-AACACCTCTCGT---AGTTACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGAGACCACGCATACTTCCTCTTATCCATCAATGTAACCTTTCGTTG----------CGC--CAACAGGACAACGCGA---GGTCCC-ATGTTCCTGGCTGAAAACCCTGTTCT-TGA--TT-------------GAT----------CA-CCATGCAGTCCA----------------------GATTA-G--T-----CC---CGAA-TC---GAA-------------C----AATTGTGAGGTGAG-T-TGGACAGGAGG---GTTAGGAAGCACA-TCAACGTCCCATA-TAA-CGTCGTTCAACTCATGCAGGCACTTATTC-AGGT----GTGGAATG---ATATTCCT----CAAAGGACAATA--AA---CACCTT-GATG-------GGGT--CAATGCCAA---------GAACATC---------GACTGA-AGCCAGGGATGGG--CACATGC--T--ACTG----GTA--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTTT---GACGATATT-CACGCAAATGCCG---TA---TGA-TAGGACA--TAAAAAATCTTAAAAAT-GTATTCAGTAATGATGAAACA
gi|20 : taacggaaagcgacat----------------ATTTGGAGGAG----GGTCTGTTATG-----GTAAGT-GCATGG-ATATCTCAAA-------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGAGACCAAACGTCTTTTCTCTTATCCAGCAGCG--------------TAACCTT-AAGTTACAGCAGGACAACGCGG---GGCCAC-ATGTT----GCT----TGGGATTGTCGTGA--CT-------------CTC----------TGACT---CAAAACTT---------------------GATTatctagacacctaaataatgaacta
gi|32 : GGA-TCAGGTCTTGAGACCACACGTCCATCA-AGT-----TCAACG--------------TAACCTT-ACACTGCATCGGGACAATGC-A---AGTCTCAATGCC----GAT----AGGGTTTggccaccacaca
gi|6 : ca----ACAGTT--CTTTGA--TT-------------GAA----------CAAAT---TAAGTTTA---------------------GATTTTG--T----CGC---A--A-TC---GAG-------------C----GT--GTGGAACGAG-T-TGGACAGAAGG---T-TAGGAAGT-GCGTCAACGT-ACATA-TAGTCGT--CTCAATTCA-ACAGGGCCTTATTCAAGG-----AGTGGAGAT-AAT-ATTCTCTCGCAA-GGACAA-A--------ACCTTGGAT--------GAGG--CAGTGTT--CGAGA-CAAGAGCAGTG--------GACTAAGAGCCAGG----GGAGGGC-CAG--C--TATGA-TTGGATT----------------GTT------GGGTTCCC--TG-TTC-----ATGTTGTTGCATGCAAACACTGT--TG---TGA--AG-GCA--AC--AAATCATAAAAAT-GTAATCAtaatgattttcttgctcaaaacaacatct
gi|36 : atcaggtcttgatgacacatttttccttttatccatcgaaagcaacttacgtttgaggaggatactaagcgaagtatgctaggtttgtcgtgagtttctgtaataacaacg-------------CAA----------CGTTT----AGGTATT---------------------GATTT-G--------CCGA-C--A-TT---CAG-------------TCCAGATTT-TGGGAA-ATGC-TGAGCAGGAGGGTTGATAAGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : ttgttttgacactccagctctaaaTTCTT---------------------TATTG-G--TCATATTC---A--A-TA---CAGAG-----------C----ATTTGTAGGACGAG-C-TGGACAGGAGG---GTTCGGAAGT-GCGTCAGTGTTGCGTAATAT-TGTCGCTTAACTCAAGCATGCCGTTATTC-AAGTACATATAGAATGA-TAT--CTCT----CAAAGGACAATA--AAA--CACATC-TAAG-------GGTT--CAATTTTAATAAGAGTAAGAAAAGA---------AAGAGA-AGCCATGGAT--GAGCACACAAGGT--ACTGATTGG-GTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTTT---AACGCTATT-CACGCAAACACCGCC-TG---CGA-TAGGACA--ACAAAAATCATCAAAAT-ATAGTCAGTAATGATTAAATAcacgtaaaca
gi|33 : tgttatggtacgtc---------------------GATTT-G--T----CCT---C--AATC---GAG-------------C----ATTTGTGGGACGAG-C-TGGACAGGAGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
gi|5 : ggtttgtcatgactttctagctgaagaaaatgtcccagttcttgtttgtccatcatacagtccaTTT-A--TG---TCC---T--A-TCATACGG-------------C----ATTTGCGTGAATAT-CGTCAAAAGAAGG--------GAACC-CAGCCActtaggaag
gi|10 : taacggaaagcgacatattcgggggatggtctgttatggtttgagcagggatatctcaaggcatgaaaacacctctcgtagttacccacggcaatcttacagcagtaacatgccttgagaccacgcatacttcctcttatccatcaatgtaacctttcgttgcgccaacaggacaacgcgaggtcccatgttcctggctgaaaaccctgttcttgattgatcaccatgcagtccagattagtcccgaatcgaacaattgtgaggtgagttggacaggagggttaggaagcacatcaacgtcccatataacgtcgttcaactcatgcaggcacttattcaggtgtggaatgatattcctcaaaggacaataaacaccttgatggggtcaatgccaagaacatcgactgaagccagggatgggcacatgctactggtaaagaaatgATA--AA-TGTCATTCAACTCATGCAGTCCCTCATTC-ATG-----AGTG--GAATAATAACTTT----CAAAGGACAATA--AC---CACCTT-GATG-------GGGT--CAATGTTAAGGAGAATATGAGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGC--T--ACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATAC---AACACTATT-CACGCTAACACCATTATG---TGA-TAGGACA--ACAAAA-TCATTGAAAT-GTATTCAGTAAAGATGAAATAaaatcttaaaaatgtattcagtaatgatgaaacaatctagacacctaaataatgaacta
gi|17 : gagtgttataacaGGACAATG--CA---CAACTT-GATT-------TGGT--CAATATTAAGGAGACTACGGGCATT---------GACTAA-Aattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|22 : agGGACAATATCATAAACACCTT-GATG-------GGGT--CA--GTTAAG-AGA--------------------GAC------------GT--GCACACACTC--T--ACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACgtgcggtattggcacacacattgcttttttaaagttgtttttgcaaaggcattatgcaatgaatgggatatcaaaaattatcaaaatatgtttagtaacattgaaataatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|23 : aggagtggaatatgatatccctctaaCAATA--AA---CACCTT-GATGTTAAGGAGAGTAATAACACTTATAAAATTGT-AGCAAT---------GACCGA-AGCTAGG--TATGGACACACAC--TCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTTT---AACGTCCTT-TATACAGGCGCCGTC-TG---TGA-TAGGACA--ACGCATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAG--T--ACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TGTTTTAAATAACGCTATT-CAGGCAAACGCCGTC-TG---TGA-GACAACAAGACAACAA-CAACAA
gi|16 : ACACGC--T--ACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATTT---AACGCTATT-AACGTAAACACCGTC-TG---TGA-TAGGGTA--ATATATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|19 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnatggtggcacACACGC--T--ACTGATTTG-ATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTTA---AACGCTATC-AACGTAAACACC-TC-TGA--TGA-TAGGGT---ACTATATTAAACAAAACAATATCCA-TAATGTTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|17 : cacCT-TT-TTTA---AA-GTTGTT-TTTGCAAAGGCATTA-TGCAATGAATGGGATA--TCAAAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|15 : agggacaatgcacaacttgatttggtcaatattaaggagactacgggcattgactaaagtgcggtattggcacacacattg-GTATTTATTAATGATGAAATAatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|30 ): TGCGGACGGTACCCTCGATTTTAACACTATTTAGGCAAACACTGTATTCAATAATGATGTAATAATCGAGAAACCCAAACAATAAACTAATCCTTCACGAAACATGAAAAATAATAACCATCGAAAATAAAC
Unaligned ( gi|31 ): AGTTAGATGAGTATCTATCAACGTTGTGTGGCTTCTTACTCGCATGTAAATGGAAAGCGACAATTGGGGGGGGTCTGAAATGATATGGGCCAGCCAGATAACTCAGCAGAAAACATCTTTTGT
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG
Alignments
lowQualScore : 1111 333333333 1 11111111 1111 2222222222222222222 1111 111111111 22 22222222 22222222222 777777777777777777777777777777777777777777777777777777777777 111111111111 333333333333333333 11 11 2222222222 1111111 111 1111111111 33333333 99999999999999999999999999999999999999999999999999999999 222222222 1111111 44444444444444444 111111 22222 222222222 1111111 11111 6666666666666666666666666666666666666666666 11111111 11111 1111 111111 33333 555555555555 111 33333333 1111 11111111 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 1 1111 666666666666666666666666666 11111 22222222222222222222 222222222 111111111
lowQualScore : 5 1 0000 5 0 111111111 1 5 5 5 5 11111111 2 5 0000 44 8888888888888888888 0000 5 4 0 44 66 4 4 777 444444444 777777 888 1 2 66 1 6 0 4 4 55 44 777 4 1 11111111 22 3 22222222222 44 3 7777 3 0 555555555555555555555555555555555555555555555555555555555555 44 3 555555555555 3 3 777 8 555555555555555555 4 00 1 1 5 0 11 8888 777777 4 4 4 777 4 0 777 9999999999 777 3333333 5 2 5 5 333 0 5 0 5 8888888888 0 888 66666666 2 0 1 66666666666666666666666666666666666666666666666666666666 000000000 0 4 1 6 8888 1 4 4444444 55 4 00000000000000000 0 222222 2 9999 1 4 1 77 44444 0 222222222 4 5 0 8888888 1 22 66666 5 5555555555555555555555555555555555555555555 99999999 22222 0000 5 5 66 5 888888 22222 1 5 1 77 5 333333333333 3 000 3 77 22222222 2 0000 1 6 88888888 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 0 0000 0 0 0 1 22 5 1 666 5 5 222222222222222222222222222 66 0 00000 4 2 77777777777777777777 4 1 000000000 1 3 0 4 0 3 555 1 3 44 888888 3 3 444444444 88 0 55 3 55 666 4 1
lowQualScore : . . .... . . ......... . . . . . ........ . . .... .. ................... .... . . . .. .. . . ... ......... ...... ... . . .. . . . . . .. .. ... . . ........ .. . ........... .. . .... . . ............................................................ .. . ............ . . ... . .................. . .. . . . . .. .... ...... . . . ... . . ... .......... ... ....... . . . . ... . . . . .......... . ... ........ . . . ........................................................ ......... . . . . .... . . ....... .. . ................. . ...... . .... . . . .. ..... . ......... . . . ....... . .. ..... . ........................................... ........ ..... .... . . .. . ...... ..... . . . .. . ............ . ... . .. ........ . .... . . ........ .................................................................................................................. . . .... . . . . .. . . ... . . ........................... .. . ..... . . .................... . . ......... . . . . . . ... . . .. ...... . . ......... .. . .. . .. ... . .
lowQualScore : 7 0 6666 0 1 111111111 4 0 0 0 0 44444444 0 0 6666 66 2222222222222222222 9999 0 0 1 66 11 7 4 888 444444444 666666 000 1 0 11 9 2 9 0 0 55 88 000 0 0 11111111 00 3 88888888888 66 3 0000 3 2 222222222222222222222222222222222222222222222222222222222222 22 1 888888888888 6 6 000 0 999999999999999999 4 66 1 0 7 7 33 5555 444444 0 0 0 000 0 8 888 9999999999 000 1111111 7 5 0 7 777 4 7 2 0 6666666666 1 888 22222222 0 1 4 44444444444444444444444444444444444444444444444444444444 000000000 9 0 4 5 5555 0 4 4444444 44 4 00000000000000000 9 888888 1 4444 7 0 1 99 66666 4 999999999 0 7 7 6666666 0 55 33333 7 3333333333333333333333333333333333333333333 00000000 55555 6666 0 0 99 0 000000 33333 4 7 4 99 7 777777777777 0 000 0 99 11111111 5 6666 0 5 11111111 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 0 6666 2 2 2 0 00 7 7 999 3 0 222222222222222222222222222 66 7 00000 0 5 88888888888888888888 0 6 000000000 4 6 2 5 4 3 888 0 8 22 888888 3 3 888888888 55 1 66 6 00 333 0 0
consensus : AAAA-GAAACGCAAGTTCG----GATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT-TTN-A----TTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCAG--ATTTTTCAAGAAAGCGTGCATCCGGGGTACTCCT-GCA-C--CATATGTGC---TGGTAAA-TCATTACAAAT------CGAACATTGGAA-C--------A-GT--AC-A---AA-TCATCT-------A----------C------------TT---T------A--A--GC----G---ATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-GATA--NGG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---T--T-A----AGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTG--CAC-T--GCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTGA-CGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGG-------GGAG-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-A---------TAACCTTACGCTGC---AGCAGGACA--ACGCG----AT--GGCCCCA----TGTTGCTAGGGTT--------TGT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( family-887 ) : AAAA-GAAACGCAANTTCG----GATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT-TNT-A----TTAA-ATCT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCAG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCAG--ATTTTTCAAGAAAGCGTGCATCCGGGGTACTCCT-GCA-C--C-TATGTGC---TGGTAAA-TCATNACAAAT------CGAACATNNGAA-C--------A-CT--AC-A---AA-TCATCT-------A----------C------------TT---T------A--A--GC----G---ATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-GATA--NGG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---NGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCGTACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACNGTTAGGAATCG-GTT-------GC-NGG-GGTT---T---T--T-A----AGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGTTTG--CA--T--GCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTGA-CGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGA-------GGAG-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACGCGTCCTTCCTCTTATCCA--TC-AACGTA---------TAACCTTACGCTGC---AGCAGGACA--ACGCG----AT--GGCCCCA----TGTTGNTAGGGTT--------TGT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGNGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGNACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
gi|1 : AAAA-GAAACGCAAACTTGTTTTGAATTTGTA-ATATAACGTCC-AGGCACATG-GAC-AATAT-TTT-AAAAATTAA-ATTT----GACATTGAGCTACGGTACATGTACCTCCGTGCACTG-TGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GC----------------AG--TTTTTGCAAGAGAGCGTGCGTCCGGGGTACTCAT-ACA-C--CATATGGGC---TGGTAAA-TCATAACAAATAAGCTACAAA-ATGA-AA-C--------A-GT--AC-A-----------T-------A----------T------------TT---C------------GC----G--------GT-AGA------------GCAAAATGCCG-CG-ATTGANT
gi|1 : ggaaAA-C--------A-GT--AC-A---AA-TT-TC--------------------------------------------------GC----G--------GT-AGA------------GCAAAATGCCG-CG-ATTGAATAAA---GTC-GATA---GC-------------TCT-GATATAATGTAAG-----TC-GTA----AGGTC--A---T-GT-AGTCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCNGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaGACATTC-GTA----AGGTC--A---T-GT-AGCCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCAGATTAGTTGG-GGGTGTCAGAGACACGGGGAG-ATTAGG-C-GGCCGCCCCAG-CAGTGGACGC-TC-----GT---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCGTGCACTTCCGT----------AACCGATTTGAGGC-----------------GACGACATGTACGGGGACG---------GCACGCCACGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcnA-----------C-----------------GGG------------GACG---------GCACGCCAAGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCCAAGAACGG-TAG----CG-GTA-------GC-TA----------------T-A----AAGCCAC-----------------------------------TACACAGAGGCGATGCCAATGTCGAA------GATTGTTTG--CACGT--GCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTTA-CGAGTCTCACCTCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGA------------CGATAGGTCTGAC--GCTGTATG-----------TA----------------A----CGGA-------AAAGCGACAGATCGGTAGGCGAAGGCATGTTA-CAG--GGCATATTTTAAGGC----GTGAAAACACCTCTCGTGG--G-TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGA-GACCACAGGTCCTTCCTCTTATCCA--TC-AACG-----------TAACTTTACGTCGC---A-TAGGAGA--ACGCG----ATCAGGCCCCG----TGTTGGAAGGCTT--------TGT--------TG---------TGACTTT-------------CTGACTGAAAACACGTC-T-CAGATAATTATT---------------------T-GGCCTCCACGCAGTCCAGATCCCCC-C-TCGACC----ATTTGTTGGACGAACTGAACAAGGGGTTTA-GAAGTGCGTCAACGTCACATA-TAACGT------------CACAGGCCCGTATTC-TGGAGT-------GGAG-------T-A--------------GCAATA-----AA-TACCTCGATGGGGTCAATGTTAAGGAGAGTCA----------------G-AGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGCTACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTT----T----AACGCTATT--GTGCAAACGCCATT-TT-TGATAGA--ACAATA--AAAAGCATCGAAAT-GTATnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|10 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtATA--AATGTCA-TTCAACTCATGCAGTCCCTCATTC-ATGAGT-------GGAAT--A--AT-AA-CT-TTCA-AAGGACAATA-----AC-CACCTTGATGGGGTCAATGTTAAGGAGAATAT----------------G-AGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGCTACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATA----C----AACACTATT-CACGCTAACACCATTATG-TGATAGG--ACAAC---AAAATCATTGAAAT-GTATTCAGTAAAGATGAAATA
gi|11 : gagtgttataacaACACCAAGTACAT-AGCATTGA----TG-------AGTGTGTCGGAGTACTGTTACGAGTCG-GTT-------AC-AGGAGGTTCA-T---T--G-A----AAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTG--CACAT--GCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGAACTAG-------TCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGGTAAGCAATA-TTCTGAT--TCT---TGTT---------CA----------------A----CGGAAAGCGATAGGG-----GGTCAGT----TATGTTCTA-GA-CAG--GG-AT------AGG-------------ACCTCTCGT-GT--TTATCGATGACAATCTTGCAGCAGTGACTTATCattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|12 : TAAAGACGTACGTCTC-CG-ATTTCAG------------A-----------C-----------------GGT------------GACG---------GCAC---AAGT-TGTCCACACCCA----TGGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTATCAGTAGC-AGG-AGTT---T---T--C-ATTTTAGGCCACAACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAG---------------AATGCAGTGGCTGATTG--CA--C--GT---------GTTTCGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCGA-C-AG-------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTTGTGAT----GATA-TTTTGAC--GCT---TG-----------C
gi|13 : AA-GAAATGCAGCTTCG----GATTTCGTA-A---AAT-T----GACG---------AA-AC-TTA-A----TTAA-ATCT----AA-ACTG---------------------GGG---------AAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCAG--ATTTTTCAGGAAAGCAAGCAAGCAGGGTATTTCT-GCA-T--CATATATGC---TGATAA--TCATTACAACT-------GAACATTGGAA-C--------A-GT--AC-A---AA-TCATCT-------A----------CACAAGACTTTTTTT---TG-----A--A--GC----T---GTT--GT-AGA------------GAGACATGCAC-CG-ATTGAATGTA---GTC-GA-A--CGG-------------ata
gi|14 : cA-TGTTCTTCGC-TTAAA-T--TCAGC------GT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTTCAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCTTGCA-C--CATAT-TGCCACTTGTAAAGTCAGTGGAAAT------CAA---TTCAGC-T--------A-CA--AC-A---AA-CTTTCC-------T----------C------------TT---C------G--A--AA----GGAAATT--GT-AGA------------GCGAAATGAAGTCGAAATAAAAGAG---AAC-TATT--TGC-------------TCT-G--CTAATGCATGGGCATTT-GCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACATG---AAGATCAAC---AAT-----gaaaggaccatt
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAGTACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TG-TTTTAAAT----AACGCTATT-CAGGCAAACGCCGTC-TG-TGA---G--ACAACA--AGAtctc
gi|16 : GGTGG-CACACACGCTACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATT----T----AACGCTATT-AACGTAAACACCGTC-TG-TGATAGG--GTAATA--TATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaacaacaacaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|17 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnat-AGGGACAATG-----CA-CAACTTGATTTGGTCAATATTAAGGAGACTAC----------------G-GGCATT---------GACTAA-AGTGCGGTATTGGCACACACATTGCTTTTTT---------A---AA-G---------------------T-TG-TTT----TTGCAAAGGC-ATT--ATGCAA---------TG--AATGGG--ATATCA--AAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|18 : ATAAAT-------AAACATTGGA--C--------A-GT--ACTA---AA-TTACCT-------A----------C------------ATGCAC------A--A--AC--------ATTCTGT-CGAACCATAATTGAGGCGAGATCCCG-CG-ATTGAATGAAGTGGTCGGGTA--GGGATGC---------TCT-GA-ATAATGCCTGGAC--TCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTATGT-GGTGT---ACAT----TAGA--CAC---AAT------TTCC-TTTAGTTGG-GCGCTTCAGAACCTT--GGAG-ATatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|19 : ACACACGCTACTGATTT-GATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTT----A----AACGCTATC-AACGTAAACACC-TC-TGATGATAGGGTACTATATTAAA-----CAAAACAATATCCA-TAATGTTGAAATAagtgaactgcaaaagtgatgtccg
gi|2 : cAAAG-GAAACGCAAGTTCG----TATTTTGTA-ATATAACGTTT-AGACACGTG-GAC-AA-AT-TAT-A----TTAA-ATTT----GACACTGATCTAC-----------TTCTGTGCATTG-TGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCAG--ATTTTTCAAGAAAGCATGCATTCAGGATACTCCA-GCAGC--T-TATGTTT---TGGTAAA-TCATGATAAAT------TGAACATATGAA-T--------A-CT--AC-A---AA-TCATCT-------A----------C------------TT---T------A--A--GT----G---ATT--AG-AGA------------GCGAAATACCG-AG-ATTGAATGAA---GTC-GATA--GGG-------------TCT-G--ATAATACAAGGCCCTTT-GCA----ACGTC--A---T-GT-AGCCA-AGCA---ATTT-GGTGT---ACATG---CGAA--AAC---AAT-----ATCCCGTTTAATTGG-GCGTCTCAGAGCCACAGCAAG-ATT-GA-T-GACCGTCCTAG-GAG-AGAGGC-CT-----AG---GCGTTATG---TC--------AAGATAGGGGCATATGCCTCTCGCATCTGCAT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----CAGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTT-------GT-TGG-AGTT---T---T--T-------GACCAAAACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTG--CA--T--GCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAGA-CGCT-------TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGGTGATTGATA-TTCTGAC--ACT---TG-----------CG----------------AT--TCGGG-------GAAG-----AGCTTGT----TATGGTATG-GG-CAG--AG-ATGTTTCAAGGC----ATGGAAACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGA-GATCGCAAGTCCTTCCTCGTATCCC--TC-AACATATTATGTTGTTAACC-TACGCTGC---AGCAAGACA--ACGCG----A---GGTCCCG----TGTTGCTACAGTT--------TGC--------TG---------TGA--TT-------------C--A--------GCGTC-C-CAGTTCTTGATT---------------------T-G-------------------TTCCC-A-TCCAGC----ATTTGTGGGAAGATCTGGACAGAAGGGATAAGAAACCAGTCAACGTCCCATA-TAACGTTC-CTCAATTAACGCAGGCCCTTATTC-AGGATT-------GAAG---GAAATAA--TT-GTCA-ACGGACAATA-----AT-CACCTTGATGGAGTCAATGCTGAGGAGAGTAT----------------G-AATAGT---------GACTGA-AACCAGGAGTAGGAAAACACACCACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTT----A----AACGCTATT-CACACAAACGCCGTC-TG-TGATAGA--ACAACA--AAAATCACCAAAAT-GTATTCAGTAATGATGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|20 : ----------------AT--TTGGA-------GGAG-----GGTCTGT----TATGGTAAG-TG-CAT--GG-ATATCTCAAA------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGA-GACCAAACGTCTTTTCTCTTATCCA--GC-AGCG-----------TAACCTTAAGTTAC---AGCAGGACA--ACGCG----G---GGCCACA----TGTTGCTTGGGAT--------TGT--------CG---------TGA--CT-------------C--T--------CTGAC-T-CAAAACTTGATT---------------------G-G-------------------CCACC-A-
gi|21 : ------A--A--GC----G---ATT--GT-AGA------------GCAAAATCCCG-TG-ATTGATAGGG---GTTGGACAATTGC-------------TCT-T--ATAATGCAGGGGCATTT-GCA----ACGTC--ATATT-GT-AACCT-AGCA---ATAT-AA------ACATG---AG-----------------------GCTTAGTTGC-ACATCTCATAGCCACA------ATT-AA-G-GA--GACTTGGAAAGCCAACGCATT-----GCATGGCG--ACG---TC--------AAAGTAGACGCACACGTCTTTTGCACTTCCAT----------AA-----------C-----------------caca
gi|22 : g-AGGAGT-------GGAATATG--AT-AT-CC-CTCT-AAGGACAATATCATAAA-CACCTTGATGGGGTCA--GTTAA-GAGA-------------------------------------GAC------------GT--GCACACACTCTACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACcaattt
gi|23 : CAATA-----AA-CACCTTGATG---------TTAAGGAGAGTAATAACACTTATAAAATTGTAGCAAT---------GACCGA-AGCTAGGTATGGACACACACTCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTT----T----AACGTCCTT-TATACAGGCGCCGTC-TG-TGATAGG--ACAACG--CATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|24 : CT-TCA-C--CATATATGC---TGATAAA-TCATTACAAAT------CAAACATTGGAG-C--------A-GT--AC-A---AA-TCAGCT-------A----------C------------AC---A------AC-A--TC----T---CTT--TT-----------------CGAA-----G-TA-ATTG--TGAA---TTC-GATA--GGG-------------T-------------AGGGCCATT--GC--------TCTGA---T-GT-AGCCC-AACA---ATAT-GGTGT---ACATGCATAAGA--GACATGAAT-----ATTCC
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GCTTGCTTTCAGC--------------AAAGTATGCATCCAGGGTACTCCT-GCA-C--C--ATGCTC---TGGTAAA-ACATTG-AAAT--------AGTTTGCAAATC--------AGCC--AC-A-------CATTT-------C----------T------------TT---T------A--GATGC----G---ATT--AT-AGA------------GCGAAATtctttgaatggac
gi|26 : tAAA-GAAATGCAAATTTG----GATTTTGTA-AGAT--------------GTG-GGT-GA-AA-GAT-A------AA-ATCT----GACACTGAGCT---------------CCAAACACTG-TAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GC------TGCTTCCAGCAG--ATTTTTTAAGa
gi|27 : atatactagcaggGT-T-TTGGTACTCA----TGGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTT-------ACATGA-GATTCA-T---G--T-A----AGGCCACGACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|28 : tcaccaatttcagacgtcgtcggagaagtaacataaatAGAACCACAGGAAG-ATT-GAGT-GACCATCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------------GTGACGTAAGTCTCTCGCACCTCCGTTACAGATTCAGA-----------C-----------------GGT------------GACG---------GCACGCCAAGT-TATAGGTATTC
gi|29 : AAAGCATGCATACGGTGTACCACT-GCA-C--CATATGTGC---TGGTAAA-TCATTACAAAC------TGAACATCAGAA-T--------G-GT--AC-A---AA-TCAGCT-------ATAAATTTTTTC------------TT---G------A--T--TT----G---ATT--GA-AGA------------GCAAAATGCCtgtactctgataggacaa
gi|3 : AAGA-GAAACGCAAGTTCG----GATTTTTTA-ATA------------CACGTT-GATTAA-AT-TTA-A----TTAA-ATTT----GACGCTGAACTAC-----------CACCGGGCGCAG-TGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCAT--ACTTTTCAAGAAAGCGTGCATCCGGGGTGCTCCT-GCA-C--CCTATGTGC---TGGTAGA-TCATTACATGT------CGAGCATTGGAA-CTGGA----A-CTGTAC-A---AA-TCAGCTTCGCAACATTT-------C------------TT---T------ACCAT-GC----G---ATT--GT-AGA------------ACAAAATGCCG-CG-ATTGCATGAT---GTA-GATT--C---------------TCC-G--ACAATGCAGGAGCATTC-GCACGCAACGTC--A---T--T-AACCC-AGCA---ATAT-GG-GT---AAAAG---GGGAC-AAC---AATTAAATATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-GTT-GAAT-GACTGCCCCAG-GAGCGAACAC-CC-----AC---GCGTTACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGTGTCTCCGT----------AA-----------CCAGCCG-----------GA-------------GACG---------GCACACCAGGC-TGTCGGTCCTCA----TTTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTT-------GC-AGG-AGTTCCAT---T--T-A----AGGCCACGGCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACA--T--GCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTGA----CGTCTTGTTCACTGA-TGAG-------TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGGTGAGCGATA-TTTTGAC--GCA---TG-----------CGTAACGAAAAGCGACAAAT--TCGG--------GGAG-----GGTTTGT----TATGGTATG-GG-CAG--GG-ATATCTCGAGGC----GTGAAAACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGA-AATCACGCGTACTTCCTCTTAACCA--TC-AACG-----------TAACATTAAGCTGC---AGCAGGACA--ACGCG----AT--GCCCCCA----TGTTATTAGGGTT--------TGT--------CG---------TGA--CTTTCTGGTTCAAAAC--A--------ACATC-C-CAGTGCTTGATTGGCCACCATACAGTCCAGATTT-G-------------------TCCCTAA-TCGAGC----ACTTGTGAGATGAGCTGAACAGGAAGGTTAGAAAGCGCATCAACGTCTTATA-TAACATTG-CTCAACTCACGAAGGACCTTATTC-AGGAGT---------------------------------GGATAATA-----AA-CACCTTGATGGCGTCCATGTTAAGTAGAGCAA----------------G-AGCAGT---------GACTGA-AGCCAGGAGTGctaaatggaaaag
gi|30 : cggaaGC--GGA------CGGTACCCT-CGATTT----T----AACACTATT-TAGGCAAACACTGTa
gi|31 : tGTATCTATCAACGTTGTG-TG-GC-----TTCTTACTCGCA---TGTAAATGGAAAGCG----------------ACAATTGGG-------GG-G-----GGTCTGA----AATGATATG-GGCCAGCCAG-ATAACTCA--GC----A-GAAAACATCTTTTGTattcaataatgatgtaataatcgagaaacccaaacaataaactaatccttcacgaaacatgaaaaataataaccatcgaaaataaac
gi|32 : agttagatgaCAGGATCAGGTCTTGA-GACCACACGTCC--------ATCAAGTTC-AACG-----------TAACCTTACACTGC---ATCGGGACA--ATGCA----A---GTCTCAA----TGCCGATAGGGTT--------T-T--------AA---------TGA--TT-------------
gi|33 : GTCCCA-----GTTCTT---GTT--------TGT--------C------------------------------C--A--------TCATA---CAG-TCCAGATT---------------------T-G-------------------TCCTC-AATCGAGC----ATTTGTGGGACGAGCTGGACAGGA-GCTTAGGAAGttcttgctcaaaacaacatct
gi|34 : ggtttgtcatgactttctagctgaagaaaatAAAA-GAAATGCAATTTCT----GATTTTGTA-ATATAACTTTT-AGACTCGTG-GATAAA-AT-TTA-A----TCAAGGTTT----GTCA-TG----AC-----------TTTCTA--GCTGAAGAAAA-TGT
gi|36 : tactagtggaaa-------------C--A--------ACGTT-T--AGGTATTGATT---------------------T-G-------------------CCGAC-A-TTCAGTCCAGATTT-TGGGAAATGCTGAGCAGGAGGGTTGATAAGCACGTAAAC
gi|37 : ttgttttgacactccagctctaaaTTGGTACTCA----TAGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATC--GTT-------AC-ATG-AGATCCAT---G--T-A----AGGCCATGACGTCTCTA------TGATGGCCCGCTACT----TACACa
gi|38 : ---AAT-----ATTCCGTTTAGCTGGTGAATGT-AAAGCCACATGGAGTATG-GG-T-GACCGTCCAAG-GAGCGGACGC-CCTTGCAGT---ACGTCACGACCTC--------AAGATAGAG
gi|4 : tGCAGATTCG----GAATTTCTCTATACAGC-TT--AGA-ATGTTTGTC-GA-ATATTTGA----T--A-ATCT----AATAC-GATGTAC-----------TTCCG-GTTTTT-TGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCT-GCTTTCAGGAA--ACTTTACA-GAAAGCGCGCAATCGCGTTTATCCT-GCA-C--A-TTTATGC---TG-TAAA-TCATAACA--T------T-AATATTAGAA-T--------T-AT--AT-ATTTAACTCATCC-------A----------T------------TT---TGTTATGA--A--GTCTTTA---TTT--GTTAGA------------GTGAATTGCCG-CG-ATTGAATGAA---GTA-AGTA--TGG-------------TTTAG--AACATTCAAGG-CATG--GCA----ACGTC--A---T-TT-ATCCCTAACA---AAAT-GGTAC---TCATC---AGAC--AAC---AA----------CGTATCGGTGG-GCGTCTCAGAGCAACAGGGGG-TTT-GA-TTAACCGTCCTAA-GAGCA-----------------------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGT----------AA-----------CCGATTTCACATATTTCGGAC------------GACGCCGGATATGGCACGCCAAGT-TGT-GGCACTCA----TGATCGGTCATTG--------AACAGTTAGGAATCG-GTT-------GC-TGG-GGTT---TCATT--T-A----AGGCCACGACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTG--CA--TATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTGA-TGAG-------TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTGTa
gi|5 : ----------------AT--TCGGG-------GGAT-----GGTCTGT----TATGGTTTG-AG-CAG--GG-ATATCTCAAGGC----ATGAAAACACCTCTCGTAGT---TACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGA-GACCACGCATACTTCCTCTTATCCA--TC-AATGTA-----------ACCTTTCGTTGCGCCAACAGGACA--ACGCG----A---GGTCCCA----TGTTCCT--GGCTGAAAACCCTGTT-------CT---------TGA--TT-------------G--A--------TCACCATGCAG-TCCAGATT---------------------A-G-------------------TCCCG-AATCGAAC----AATTGTGAGGTGAGTTGGACAGGAGGGTTAGGAAGCACATCAACGTCCCATA-TAACGTCG-TTCAACTCATGCAGGCACTTATTC-AGGTGT-------GGAAT--G--AT-A--TTCCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGC---------CAA----------------G-AACATC---------GACTGA-AGCCAGGGATGGG--CACATGCTACTGGT----A--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTT----T----GACGATATT-CACGCAAATGCCG---TA-TGATAGG--ACATAA--AAAATCTTAAAAAT-GTATTCAGTAATGATGAAACAtttgac
gi|6 : taacggaaagcgacatATCAGGTCTTGATGAC---ACATTTTTCCTTTTATCCA--TCGAAAGCA-----------AC-TTACGTTTG---AGGAGGATACTAAGCGAAGTAT--G---CTAGGTTTGTCGTGAGTTTC--------TGTAATAACAACGACAGTTCTTTGA--TT-------------G--A--------ACAAA-T-TAAGTTTAGATT---------------------TTG-------------------TCGCA-A-TCGAGC----GT--GTGGAACGAGTTGGACA-GAAGGTTAGGAAGTGCGTCAACGT-ACATA-TA--GTCGTCTCAATTCA-ACAGGGCCTTATTCAAGGAGT-------GGAGAT-A--AT-ATTCT-CTCGCAAGGACA--A-----AA-C-CTTGGATGAGG-CAGTGTT--CGAGA-CAA----------------G-AGCAGTG--------GACTAAGAGCCAGGGGAGGGC-CA---GCTA-TGA-TTGGAT--------------T--GTT------GGGTTCCC--TG-TTC----------ATGTTGTTGCATGCAAACACTGT--TG-TGA-AGG---CAAC----AAATCATAAAAAT-GTAATCAatctagacacctaaataatgaacta
gi|7 : AGCGGATGT-CC-----GC---GCGTTACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCGATCCTCCGT----------AA-----------CT----------------GATTCCA--------GATG---------ACACACTAAGC-TGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-GGG-GGTT---T---TATTGA----AAGCCACAACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTG--CACAT--GCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTGA-CGAG-------TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGTT-TGAATACCGAAA-AGC-GAC--A-------------------G----------------AT--TCAAA-------GGAG-----AGTCTGT----TATCGTATT-GG-GAG--GA-AAACCTGAAGGCACAAATAAAAACACCTCTCGTG---GTTATACATGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : GAGC----ATTTGTAGGACGAGCTGGACAGGAGGGTTCGGAAGTGCGTCAGTGTTGCGTAATATTGTCG-CTTAACTCAAGCATGCCGTTATTC-A--AGTACATATAGAAT---G--AT-AT-CT-CTCA-AAGGACAATA-----AAACACATCTAAGGGTTCAATTTTAATAAGAGTAA----------------G-AAAAGA---------AAGAGA-AGCCATGGATGAGCACACAAGGTACTGATT-GGGTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTT----T----AACGCTATT-CACGCAAACACCGCC-TG-CGATAGG--ACAACA--AAAATCATCAAAAT-ATAGTCAGTAATGATTAAATActtgcgtaac
gi|9 : tgttatggtacgtcttctttattggtcatattcaatacaAAAATGAAACTTAAGTTCA----GATTTTGCA-ATATAGC-TTTTAGACACGTG-GACGAA-AT-TTG-A----TTAT-TTTTTTTAGACA--GATCGAC-----------TTCCGAGCTCTG-TGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCAG--ATTTTTCA------------TTCGGGGCACTCCT-TCA-CAAC--ATGTGC---TAGTAAA-TAATTACAAAT------CGAACAATGGAA-CTGTGCAAAG-CT--GC-A---CA-ACATTT-------G----------T------------TT---TCG----A--A--GC----G---ATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATTAT---GTC-AACA--AGGTTAGGACCATTGCTCT-G--GAAATACGTGGGTATCA-GCA----ACGTT--A---T-GT-ACCTC-AGCA---ATAT-GGTGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 333333333 2 1111 1111 2222222222222222222 1111 111111111 11111111 1111111111 88888888888888888888888888888888888888888888888888888888888888888888888 111111111111 333333333333333333 11 11 2222222222 1111111 111 1111111111 33333333 99999999999999999999999999999999999999999999999999999999 222222222 1111111 333333333 111111 2 222222222 1111111 11111 666666666666666666666666666666666666666 2222222222222222 1111 111111 33333 444444444444 111 333 11111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 1111 666666666666666666666666666 11111 22222222222222222222 222222222 111111111
lowQualScore : 5 00000 5 0 111111111 1 5 0 5 66 1 0000 2 5 0000 44 8888888888888888888 0000 5 4 0 999 66 4 4 777 444444444 777777 888 1 2 66 1 6 0 4 0 777 44 1 88888888 44 0000000000 3 555 55555555555555555555555555555555555555555555555555555555555555555555555 44 3 555555555555 3 3 777 4 4 555555555555555555 4 00 1 1 5 0 11 8888 777777 4 4 4 777 4 0 777 8888888888 777 3333333 5 2 5 5 333 0 5 0 5 8888888888 0 888 66666666 0 1 66666666666666666666666666666666666666666666666666666666 000000000 0 4 1 6 8888 1 4 4444444 55 4 555555555 0 222222 2 9999 1 4 0 8 0 222222222 4 5 0 8888888 1 22 66666 5 333333333333333333333333333333333333333 66 0 7777777777777777 0000 5 5 66 5 888888 22222 1 5 77 999999999999 000 3 77 333 0 5 66 88888888 5 1 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 5 0 0000 2 0 0 0 22 5 1 666 5 5 222222222222222222222222222 66 0 00000 4 2 77777777777777777777 4 1 000000000 1 3 0 0 3 555 1 3 44 888888 3 3 444444444 88 0 55 3 55 666 4 1
lowQualScore : . ..... . . ......... . . . . .. . .... . . .... .. ................... .... . . . ... .. . . ... ......... ...... ... . . .. . . . . . ... .. . ........ .. .......... . ... ....................................................................... .. . ............ . . ... . . .................. . .. . . . . .. .... ...... . . . ... . . ... .......... ... ....... . . . . ... . . . . .......... . ... ........ . . ........................................................ ......... . . . . .... . . ....... .. . ......... . ...... . .... . . . . . ......... . . . ....... . .. ..... . ....................................... .. . ................ .... . . .. . ...... ..... . . .. ............ ... . .. ... . . .. ........ . . ................................................................................................................. . . .... . . . . .. . . ... . . ........................... .. . ..... . . .................... . . ......... . . . . . ... . . .. ...... . . ......... .. . .. . .. ... . .
lowQualScore : 7 99999 0 1 111111111 4 0 0 0 99 0 6666 2 0 6666 66 2222222222222222222 9999 0 0 1 000 11 7 4 888 444444444 666666 000 1 0 11 9 2 9 0 9 000 88 0 88888888 66 4444444444 3 888 55555555555555555555555555555555555555555555555555555555555555555555555 22 1 888888888888 6 6 000 0 0 999999999999999999 4 66 1 0 7 7 33 5555 444444 0 0 0 000 0 8 888 0000000000 000 1111111 7 5 0 7 777 4 7 2 0 6666666666 1 888 22222222 1 4 44444444444444444444444444444444444444444444444444444444 000000000 9 0 4 5 5555 9 4 4444444 44 4 777777777 9 888888 1 4444 7 0 4 6 4 999999999 0 7 7 6666666 0 55 33333 7 111111111111111111111111111111111111111 99 2 5555555555555555 6666 0 0 99 0 000000 33333 4 7 99 111111111111 000 0 99 999 7 7 00 11111111 0 4 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 0 0 6666 2 2 2 2 00 7 7 999 3 0 222222222222222222222222222 66 7 00000 0 5 88888888888888888888 0 6 000000000 4 6 2 4 3 888 0 8 22 888888 3 3 888888888 55 1 66 6 00 333 0 0
consensus : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TTGA----TTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TCAAC----------G-TAACCTTACGCTGC---AGCAGGACA--ACGCGA---GGCCCCATGT-TGCTAGGGTT--------TGT-CGTGA--TT-------------C--A--------NCGTC-T-CAGNTC-TTGAT---------------------T---------------------TG-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( family-887 ) : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TTNA----TTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCAC-TGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TCAAC----------GATAACCTTACGCTGC---AGCAGGACA--ACGCGAT--GGCCCCATGT-TGCTAGGGTT--------TGT-CGTGA--TT-------------C--A--------NCGTC-T-CAGNTC-TTGAT---------------------T---------------------TG-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
gi|1 : AAAA-GAAACGCAAACTTGTTTTGAATTTGTA-ATATAACGTCC-AGGCACATG-GAC-AATAT--TTTAAAAATTAA-ATTT----GACATTGAGCTACGGTACATGTACCTCCGTGCACTG-TGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GC----------------A--GTTTTTGCAAGAGAGCGTGCGTCCGGGGTACTCA-TACACCATATGGG---CTGGTAAA-TCATAACAAATAAGCTACAAA-A-T--GAAAC----A--G--TAC-A------------------T-------A----------T------------TT---C------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGANT
gi|1 : ggaaT--GAAAC----A--G--TAC-A---AA--T------T-TC--------------------------------------------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGAATAAA---GTC-G-ATA---GC-------------TCT-GATATAATGTAAG-----TC-GTA----AGGTC--A---T-GT-AGTCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCNGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaaGACATTC-GTA----AGGTC--A---T-GT-AGCCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCAGATTAGTTGG-GGGTGTCAGAGACACGGGGAG-ATTAGG-C-GGCCGCCCCAG-CAGTGGACGC-TC-----GT---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCGTGCACTTCCGT----------AACCGATTTGAGGC-----------------GACGACATGTACGGGGACG---------GCACGCCACGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcnA-----------C-----------------GGG------------GACG---------GCACGCCAAGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCCAAGAACGG-TAG----CG-GTA-------GC-TA--------------T-AAAGCCAC-----------------------------------TACACAGAGGCGATGCCAATGTCGAA------GATTGTTTGCACGTGCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTT-ACGAGTCTCACCTCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGA------------CGATAGGTCTGAC--GCTGTATG-----------TA----------------A----CGGAAAA----------GCGACAGATCGGTAGGCGAAGGCATGTTA-CAG--GGCATATTTTAAGGC----GTGAAAACACCTCTCGTGG--G-TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGA-GACCACAGGTCCTTCCTCTTATCCA--TCAAC----------G-TAACTTTACGTCGC---A-TAGGAGA--ACGCGATCAGGCCCCGTGT-TGGAAGGCTT--------TGT-TGTGACTTT-------------CTGACTGAAAACACGTC-T-CAGATA-ATTAT---------------------T---------------------TGGCCTCCACGCAGTCCAGATCCCCC-C-TCGACC----ATTTGTTGGACGAACTGAACAAGGGGTTTA-GAAGTGCGTCAACGTCACATA-TAACGT------------CACAGGCCCGTATTC-TGGAGT-------GGAG-------T-A--------------GCAATA-----AA-TACCTCGATGGGGTCAATGTTAAGGAGAGTCA----------------G-AGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGCTACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTT----T----AACGCTATT--GTGCAAACGCCATT-TT-TGATAGA--ACAATA--AAAAGCATCGAAAT-GTATnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|10 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtATA--AATGTCA-TTCAACTCATGCAGTCCCTCATTC-ATGAGT-------GGAAT--A--AT-AA-CT-TTCA-AAGGACAATA-----AC-CACCTTGATGGGGTCAATGTTAAGGAGAATAT----------------G-AGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGCTACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATA----C----AACACTATT-CACGCTAACACCATTATG-TGATAGG--ACAAC---AAAATCATTGAAAT-GTATTCAGTAAAGATGAAATA
gi|11 : gagtgttataacaACACCAAGTACAT-AGCATTGA----TG-------AGTGTGTCGGAGTACTGTTACGAGTCG-GTT-------AC-AGGAGGTTCA-T---TG-AAAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTGCACATGCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGAACTAG-------TCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGGTAAGCAATA-TTCTGAT--TCT---TG------------------------------T--TCAACGGAAAGCGATAGGG-----GGTCAGT----TATGTTCTA-GA-CAG--GG-AT------AGG-------------ACCTCTCGT-GT--TTATCGATGACAATCTTGCAGCAGTGACTTATCattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|12 : TAAAGACGTACGTCTC-CG-ATTTCAG------------A-----------C-----------------GGT------------GACG---------GCAC---AAGT-TGTCCACACCCA----TGGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTATCAGTAGC-AGG-AGTTT--TCATTT-TAGGCCACAACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAG---------------AATGCAGTGGCTGATTGCAC--GT---------GTTTCGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCG-AC-AG-------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTTGTGAT----GATA-TTTTGAC--GCT---TG-----------C
gi|13 : AA-GAAATGCAG----CTTCGGATTTCGTA-A---AAT-T----GACG---------AA-AC--TTAA----TTAA-ATCT----AA-ACTG---------------------GGG---------AAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCA--GATTTTTCAGGAAAGCAAGCAAGCAGGGTATTTC-TGCATCATATATG---CTGATAA--TCATTACAACT-------GAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------CACAAGACTTTTTTT---TG-----A--A--GC----TGTT--GT-AGA------------GAGACATGCAC-CG-ATTGAATGTA---GTC-G-A-AC--GG-------------ata
gi|14 : cA-TGTTCTTCGC-TTAAA-T--TCAGC------GT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTTCAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCTTGCACCATAT-TGCCACTTGTAAAGTCAGTGGAAAT------CA---ATTCAGCTAC----A------AC-A---AA--C------TTTCC-------T----------C------------TT---CGAA---A--G--GA----AATT--GT-AGA------------GCGAAATGAAGTCGAAATAAAAGAG---AAC-T-ATTT--GC-------------TCT-G--CTAATGCATGGGCATTT-GCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACATG---AAGATCAAC---AAT-----gaaaggaccatt
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAGTACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TG-TTTTAAAT----AACGCTATT-CAGGCAAACGCCGTC-TG-TGA---G--ACAACA--AGAtctc
gi|16 : GGTGG-CACACACGCTACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATT----T----AACGCTATT-AACGTAAACACCGTC-TG-TGATAGG--GTAATA--TATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaacaacaacaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|17 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnat-AGGGACAATG-----CA-CAACTTGATTTGGTCAATATTAAGGAGACTAC----------------G-GGCATT---------GACTAA-AGTGCGGTATTGGCACACACATTGCTTTTTT---------A---AA-G---------------------T-TG-TTT----TTGCAAAGGC-ATT--ATGCAA---------TG--AATGGG--ATATCA--AAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|18 : ATAAAT-------AAACATT--GGA-C----A--G--TACTA---AA--T------TACCT-------A----------C------------ATGCAC------A--A--AC-----ATTCTGT-CGAACCATAATTGAGGCGAGATCCCG-CG-ATTGAATGAAGTGGTCGG-GTAG--GGATGC---------TCT-GA-ATAATGCCTGGAC--TCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTATGT-GGTGT---ACATT---A-GA--CAC---AAT------TTCC-TTTAGTTGG-GCGCTTCAGAACCTT--GGAG-ATatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|19 : CACACACGCTACTGATTT-GATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTT----A----AACGCTATC-AACGTAAACACC-TC-TGATGATAGGGTACTATATTAAA-----CAAAACAATATCCA-TAATGTTGAAATAagtgaactgcaaaagtgatgtccg
gi|2 : AAAG-GAAACGCAA----GTTCGTATTTTGTA-ATATAACGTTT-AGACACGTG-GAC-AA-AT--TATA----TTAA-ATTT----GACACTGATCTAC-----------TTCTGTGCATTG-TGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCA--GATTTTTCAAGAAAGCATGCATTCAGGATACTCC-AGCAGCTTATGTT---TTGGTAAA-TCATGATAAAT------TGAACATA--TGAAT----A--C--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GT----GATT--AG-AGA------------GCGAAATACCG-AG-ATTGAATGAA---GTC-G-ATAG--GG-------------TCT-G--ATAATACAAGGCCCTTT-GCA----ACGTC--A---T-GT-AGCCA-AGCA---ATTT-GGTGT---ACATG---CGAA--AAC---AAT-----ATCCCGTTTAATTGG-GCGTCTCAGAGCCACAGCAAG-ATT-GA-T-GACCGTCCTAG-GAG-AGAGGC-CT-----AG---GCGTTATG---TC--------AAGATAGGGGCATATGCCTCTCGCATCTGCAT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----CAGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTT-------GT-TGG-AGTTT--T---T----GACCAAAACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTGCA--TGCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAG-ACGCT-------TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGGTGATTGATA-TTCTGAC--ACT---TG-----------CG----------------AT--TCGGGGAA----------G-----AGCTTGT----TATGGTATG-GG-CAG--AG-ATGTTTCAAGGC----ATGGAAACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGA-GATCGCAAGTCCTTCCTCGTATCCC--TCAACATATTATGTTGTTAACC-TACGCTGC---AGCAAGACA--ACGCGA---GGTCCCGTGT-TGCTACAGTT--------TGC-TGTGA--TT-------------C--A--------GCGTC-C-CAGTTC-TTGAT---------------------T---------------------TG-------------------TTCCC-A-TCCAGC----ATTTGTGGGAAGATCTGGACAGAAGGGATAAGAAACCAGTCAACGTCCCATA-TAACGTTC-CTCAATTAACGCAGGCCCTTATTC-AGGATT-------GAAG---GAAATAA--TT-GTCA-ACGGACAATA-----AT-CACCTTGATGGAGTCAATGCTGAGGAGAGTAT----------------G-AATAGT---------GACTGA-AACCAGGAGTAGGAAAACACACCACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTT----A----AACGCTATT-CACACAAACGCCGTC-TG-TGATAGA--ACAACA--AAAATCACCAAAAT-GTATTCAGTAATGATGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|20 : ----------------AT--TTGGAGGA----------G-----GGTCTGT----TATGGTAAG-TG-CAT--GG-ATATCTCAAA------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGA-GACCAAACGTCTTTTCTCTTATCCA--GCAGC----------G-TAACCTTAAGTTAC---AGCAGGACA--ACGCGG---GGCCACATGT-TGCTTGGGAT--------TGT-CGTGA--CT-------------C--T--------CTGAC-T-CAAAAC-TTGAT---------------------T---------------------GG-------------------CCACC-A-
gi|21 : ------A--A--GC----GATT--GT-AGA------------GCAAAATCCCG-TG-ATTGATAGGG---GTT-GGACAATTGC-------------TCT-T--ATAATGCAGGGGCATTT-GCA----ACGTC--ATATT-GT-AACCT-AGCA---ATAT-AA------ACATG---AG-----------------------GCTTAGTTGC-ACATCTCATAGCCACA------ATT-AA-G-GA--GACTTGGAAAGCCAACGCATT-----GCATGGCG--ACG---TC--------AAAGTAGACGCACACGTCTTTTGCACTTCCAT----------AA-----------C-----------------caca
gi|22 : g-AGGAGT-------GGAATATG--AT-AT-CC-CTCT-AAGGACAATATCATAAA-CACCTTGATGGGGTCA--GTTAA-GAGA-------------------------------------GAC------------GT--GCACACACTCTACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACcaattt
gi|23 : CAATA-----AA-CACCTTGATG---------TTAAGGAGAGTAATAACACTTATAAAATTGTAGCAAT---------GACCGA-AGCTAGGTATGGACACACACTCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTT----T----AACGTCCTT-TATACAGGCGCCGTC-TG-TGATAGG--ACAACG--CATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|24 : C-TTCACCATATATG---CTGATAAA-TCATTACAAAT------CAAACATT--GGAGC----A--G--TAC-A---AA--T------CAGCT-------A----------C------------AC---A------AC-A--TC----TCTT--TT-----------------CGAA-----G-TA-ATTG--TGAA---TTC-G-ATAG--GG-------------T-------------AGGGCCATT--GC--------TCTGA---T-GT-AGCCC-AACA---ATAT-GGTGT---ACATGCATAAGA--GACATGAAT-----ATTCC
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GCTTGCTTTCAGC--------------AAAGTATGCATCCAGGGTACTCC-TGCACC--ATGCT---CTGGTAA---------------------AACATT--GAAAT----A--GTTTGC-A---AA--T------CAGCC-------A----------CACATTTCT----TT---T------A--GATGC----GATT--AT-AGA------------GCGAAATtctttgaatggac
gi|26 : tAAA-GAAATGCAA----ATTTGGATTTTGTA-AGAT--------------GTG-GGTGAA-A-----GA----TAAA-ATCT----GACACTGAGCT---------------CCAAACACTG-TAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GC------TGCTTCCAGCA--GATTTTTTAAGa
gi|27 : atatactagcaggGT-T-TTGGTACTCA----TGGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTT-------ACATGA-GATTCA-T---GT-AAGGCCACGACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|28 : tcaccaatttcagacgtcgtcggagaagtaacataaatAGAACCACAGGAAG-ATT-GAGT-GACCATCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------------GTGACGTAAGTCTCTCGCACCTCCGTTACAGATTCAGA-----------C-----------------GGT------------GACG---------GCACGCCAAGT-TATAGGTATTC
gi|29 : AAAGCATGCATACGGTGTACCAC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAC------TGAACATC--AGAAT----G--G--TAC-A---AA--T------CAGCT-------ATAAATTTTTTC------------TT---G------A--T--TT----GATT--GA-AGA------------GCAAAATGCCtgtactctgataggacaa
gi|3 : AAGA-GAAACGCAA----GTTCGGATTTTTTA-ATA------------CACGTT-GATTAA-AT--TTAA----TTAA-ATTT----GACGCTGAACTAC-----------CACCGGGCGCAG-TGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCA--TACTTTTCAAGAAAGCGTGCATCCGGGGTGCTCC-TGCACCCTATGTG---CTGGTAGA-TCATTACATGT------CGAGCATT--GGAACTGGAACTG--TAC-A---AA--T------CAGCTTCGCAACATTT-------C------------TT---T------ACCAT-GC----GATT--GT-AGA------------ACAAAATGCCG-CG-ATTGCATGAT---GTA-G-ATTC-----------------TCC-G--ACAATGCAGGAGCATTC-GCACGCAACGTC--A---T--T-AACCC-AGCA---ATAT-GG-GT---AAAAG---GGGAC-AAC---AATTAAATATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-GTT-GAAT-GACTGCCCCAG-GAGCGAACAC-CC-----AC---GCGTTACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGTGTCTCCGT----------AA-----------CCAGCCG-----------GA-------------GACG---------GCACACCAGGC-TGTCGGTCCTCA----TTTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTT-------GC-AGG-AGTTCCAT---TT-AAGGCCACGGCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACATGCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTGA----CGTCTTGTTCACTG-ATGAG-------TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGGTGAGCGATA-TTTTGAC--GCA---TG-----------CGTAACGAAAAGCGACAAAT--TC-GGGGA----------G-----GGTTTGT----TATGGTATG-GG-CAG--GG-ATATCTCGAGGC----GTGAAAACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGA-AATCACGCGTACTTCCTCTTAACCA--TCAAC----------G-TAACATTAAGCTGC---AGCAGGACA--ACGCGAT--GCCCCCATGT-TATTAGGGTT--------TGT-CGTGA--CTTTCTGGTTCAAAAC--A--------ACATC-C-CAGTGC-TTGAT---------------------TGGCCACCATACAGTCCAGATTTG-------------------TCCCTAA-TCGAGC----ACTTGTGAGATGAGCTGAACAGGAAGGTTAGAAAGCGCATCAACGTCTTATA-TAACATTG-CTCAACTCACGAAGGACCTTATTC-AGGAGT---------------------------------GGATAATA-----AA-CACCTTGATGGCGTCCATGTTAAGTAGAGCAA----------------G-AGCAGT---------GACTGA-AGCCAGGAGTGctaaatggaaaag
gi|30 : cggaaGC--GGA------CGGTACCCT-CGATTT----T----AACACTATT-TAGGCAAACACTGTa
gi|31 : tGTATCTATCAACGTTGTG-TG-GC-----TTCTTACTCGCA---TGTAAATGGAAAGCG----------------ACAATTGGGGG-----------G-----GGTCTGA----AATGATATG-GGCCAGCCAG-ATAACTCA--GC----A-GAAAACATCTTTTGTattcaataatgatgtaataatcgagaaacccaaacaataaactaatccttcacgaaacatgaaaaataataaccatcgaaaataaac
gi|32 : agttagatgaCAGGATCAGGTCTTGA-GACCACACGTCC--------ATCAAGTTCAAC----------G-TAACCTTACACTGC---ATCGGGACA--ATGCAA---GTCTCAATGC-CGATAGGGTT--------T-T-AATGA--TT-------------
gi|33 : GTT--------TGT-C---------------------C--A--------TCATA---CAG-TC-CAGAT---------------------T---------------------TG-------------------TCCTC-AATCGAGC----ATTTGTGGGACGAGCTGGACAGGA-GCTTAGGAAGttcttgctcaaaacaacatct
gi|34 : ggtttgtcatgactttctagctgaagaaaatgtcccagttcttAAAA-GAAATGCAA----TTTCTGATTTTGTA-ATATAACTTTT-AGACTCGTG-GATAAA-AT--TTAA----TCAAGGTTT----GTCA-TG----AC-----------TTTCTA--GCTGAAGAAAA-TGT
gi|36 : tactagtggaaa-------------C--A--------ACGTT-T--AGGTA-TTGAT---------------------T---------------------TG-------------------CCGAC-A-TTCAGTCCAGATTT-TGGGAAATGCTGAGCAGGAGGGTTGATAAGCACGTAAAC
gi|37 : ttgttttgacactccagctctaaaTTGGTACTCA----TAGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATC--GTT-------AC-ATG-AGATCCAT---GT-AAGGCCATGACGTCTCTA------TGATGGCCCGCTACT----TACACa
gi|38 : ---AAT-----ATTCCGTTTAGCTGGTGAATGT-AAAGCCACATGGAGTATG-GG-T-GACCGTCCAAG-GAGCGGACGC-CCTTGCAGT---ACGTCACGACCTC--------AAGATAGAG
gi|4 : tGCAG----ATTCGGAATTTCTCTATACAGC-TT--AGA-ATGTTTGTC-GA-ATATTTGA----T--A-ATCT----AATAC-GATGTAC-----------TTCCG-GTTTTT-TGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCT-GCTTTCAGGA--AACTTTACA-GAAAGCGCGCAATCGCGTTTATCC-TGCAC-ATTTATG---CTG-TAAA-TCATAACA--T------T-AATATT--AGAAT----T--A--TAT-ATTTAAC-T------CATCC-------A----------T------------TT---TGTTATGA--A--GTCTTTATTT--GTTAGA------------GTGAATTGCCG-CG-ATTGAATGAA---GTA-A-GTAT--GG-------------TTTAG--AACATTCAAGG-CATG--GCA----ACGTC--A---T-TT-ATCCCTAACA---AAAT-GGTAC---TCATC---AGAC--AAC---AA----------CGTATCGGTGG-GCGTCTCAGAGCAACAGGGGG-TTT-GA-TTAACCGTCCTAA-GAGCA-----------------------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGT----------AA-----------CCGATTTCACATATTTCGGAC------------GACGCCGGATATGGCACGCCAAGT-TGT-GGCACTCA----TGATCGGTCATTG--------AACAGTTAGGAATCG-GTT-------GC-TGG-GGTTTCAT---TT-AAGGCCACGACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTGCATATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTG-ATGAG-------TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTGTa
gi|5 : ----------------AT--TCGGGGGA----------T-----GGTCTGT----TATGGTTTG-AG-CAG--GG-ATATCTCAAGGC----ATGAAAACACCTCTCGTAGT---TACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGA-GACCACGCATACTTCCTCTTATCCA--TCAAT----------G-TAACCTTTCGTTGCGCCAACAGGACA--ACGCGA---GGTCCCATGT-TCCT--GGCTGAAAACCCTGTTCTTGA--TT-------------G--A--------TCACCATGCAG-TC-CAGAT---------------------T---------------------AG-------------------TCCCG-AATCGAAC----AATTGTGAGGTGAGTTGGACAGGAGGGTTAGGAAGCACATCAACGTCCCATA-TAACGTCG-TTCAACTCATGCAGGCACTTATTC-AGGTGT-------GGAAT--G--AT-A--TTCCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGC---------CAA----------------G-AACATC---------GACTGA-AGCCAGGGATGGG--CACATGCTACTGGT----A--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTT----T----GACGATATT-CACGCAAATGCCG---TA-TGATAGG--ACATAA--AAAATCTTAAAAAT-GTATTCAGTAATGATGAAACAtttgac
gi|6 : taacggaaagcgacatATCAGGTCTTGATGAC---ACATTTTTCCTTTTATCCA--TCGAA----------AGCAA-CTTACGTTTG---AGGAGGATACTAAGCGA---------A-GTATGCTA-GGTT--------TGT-CGTGAG-TTTCTGTAATAA---C--A--------ACG---A-CAGTTCTTTGATTGAACAAATTAAGTTTAGATTT---------------------TG-------------------TCGCA-A-TCGAGC----G--TGTGGAACGAGTTGGACA-GAAGGTTAGGAAGTGCGTCAACGT-ACATA-TA--GTCGTCTCAATTCA-ACAGGGCCTTATTCAAGGAGT-------GGAGAT-A--AT-ATTCT-CTCGCAAGGACA--A-----AA-C-CTTGGATGAGG-CAGTGTT--CGAGA-CAA----------------G-AGCAGTG--------GACTAAGAGCCAGGGGAGGGC-CA---GCTA-TGA-TTGGAT--------------T--GTT------GGGTTCCC--TG-TTC----------ATGTTGTTGCATGCAAACACTGT--TG-TGA-AGG---CAAC----AAATCATAAAAAT-GTAATCAatctagacacctaaataatgaacta
gi|7 : AGCGGATGT-CC-----GC---GCGTTACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCGATCCTCCGT----------AA-----------CT----------------GATTCCA--------GATG---------ACACACTAAGC-TGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-GGG-GGTTT--TA--TTGAAAGCCACAACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTGCACATGCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTG-ACGAG-------TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGTT-TGAATACCGAAA-AGC-GAC--A-------------------G----------------AT--TCAAAGGA----------G-----AGTCTGT----TATCGTATT-GG-GAG--GA-AAACCTGAAGGCACAAATAAAAACACCTCTCGTG---GTTATACATGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : GAGC----ATTTGTAGGACGAGCTGGACAGGAGGGTTCGGAAGTGCGTCAGTGTTGCGTAATATTGTCG-CTTAACTCAAGCATGCCGTTATTC-A--AGTACATATAGAAT---G--AT-AT-CT-CTCA-AAGGACAATA-----AAACACATCTAAGGGTTCAATTTTAATAAGAGTAA----------------G-AAAAGA---------AAGAGA-AGCCATGGATGAGCACACAAGGTACTGATT-GGGTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTT----T----AACGCTATT-CACGCAAACACCGCC-TG-CGATAGG--ACAACA--AAAATCATCAAAAT-ATAGTCAGTAATGATTAAATActtgcgtaac
gi|9 : tgttatggtacgtcttctttattggtcatattcaatacaAAAATGAAACTTAA----GTTCAGATTTTGCA-ATATAGC-TTTTAGACACGTG-GACGAA-AT--TTGA----TTAT-TTTTTTTAGACA--GATCGAC-----------TTCCGAGCTCTG-TGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCA--GATTTTTCA------------TTCGGGGCACTCC-TTCACAACATGTG---CTAGTAAA-TAATTACAAAT------CGAACAAT--GGAAC----T--G--TGC-A---AAGCTGCACAACATTT-------G----------T------------TT---TCG----A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATTAT---GTC-A-ACAA--GGTTAGGACCATTGCTCT-G--GAAATACGTGGGTATCA-GCA----ACGTT--A---T-GT-ACCTC-AGCA---ATAT-GGTGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG
Alignments
lowQualScore : 11111 333333333 2 11111 1111 2222222222222222222 1111 111111111 11111111 1111111111 88888888888888888888888888888888888888888888888888888888888888888888888 111111111111 333333333333333333 11 11 2222222222 1111111 111 1111111111 33333333 99999999999999999999999999999999999999999999999999999999 222222222 1111111 333333333 111111 222222222 1111111 11111 666666666666666666666666666666666666666 2222222222222222 1111 111111 33333 22222222222 111 111 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1111 666666666666666666666666666 11111 22222222222222222222 222222222 111111111
lowQualScore : 5 00000 5 0 111111111 1 5 0 5 66 11111 2 5 0000 44 8888888888888888888 0000 5 4 0 999 66 4 4 777 444444444 777777 888 1 2 66 1 6 0 4 0 777 44 1 88888888 44 0000000000 3 555 55555555555555555555555555555555555555555555555555555555555555555555555 44 3 555555555555 3 3 777 4 4 555555555555555555 4 00 1 1 5 0 11 8888 777777 4 4 4 777 4 0 777 8888888888 777 3333333 5 2 5 5 333 0 5 0 5 8888888888 0 888 66666666 0 1 66666666666666666666666666666666666666666666666666666666 000000000 0 4 1 6 8888 1 4 4444444 55 4 555555555 0 222222 2 9999 1 4 0 0 222222222 4 5 0 8888888 1 22 66666 5 333333333333333333333333333333333333333 66 0 7777777777777777 0000 5 5 66 5 888888 22222 1 5 77 5 77777777777 3 000 3 77 000 5 0 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 5 0 0000 0 2 0 22 5 1 666 5 5 222222222222222222222222222 66 0 00000 4 2 77777777777777777777 4 1 000000000 1 3 0 0 3 555 1 3 44 888888 3 3 444444444 88 0 55 3 55 666 4 1
lowQualScore : . ..... . . ......... . . . . .. ..... . . .... .. ................... .... . . . ... .. . . ... ......... ...... ... . . .. . . . . . ... .. . ........ .. .......... . ... ....................................................................... .. . ............ . . ... . . .................. . .. . . . . .. .... ...... . . . ... . . ... .......... ... ....... . . . . ... . . . . .......... . ... ........ . . ........................................................ ......... . . . . .... . . ....... .. . ......... . ...... . .... . . . . ......... . . . ....... . .. ..... . ....................................... .. . ................ .... . . .. . ...... ..... . . .. . ........... . ... . .. ... . . . ............................................................................................................................................ . . .... . . . .. . . ... . . ........................... .. . ..... . . .................... . . ......... . . . . . ... . . .. ...... . . ......... .. . .. . .. ... . .
lowQualScore : 7 99999 0 1 111111111 4 0 0 0 99 88888 2 0 6666 66 2222222222222222222 9999 0 0 1 000 11 7 4 888 444444444 666666 000 1 0 11 9 2 9 0 9 000 88 0 88888888 66 4444444444 3 888 55555555555555555555555555555555555555555555555555555555555555555555555 22 1 888888888888 6 6 000 0 0 999999999999999999 4 66 1 0 7 7 33 5555 444444 0 0 0 000 0 8 888 0000000000 000 1111111 7 5 0 7 777 4 7 2 0 6666666666 1 888 22222222 1 4 44444444444444444444444444444444444444444444444444444444 000000000 9 0 4 5 5555 9 4 4444444 44 4 777777777 9 888888 1 4444 7 0 4 4 999999999 0 7 7 6666666 0 55 33333 7 111111111111111111111111111111111111111 99 2 5555555555555555 6666 0 0 99 0 000000 33333 4 7 99 7 11111111111 0 000 0 99 000 7 1 7 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 0 6666 2 5 2 00 7 7 999 3 0 222222222222222222222222222 66 7 00000 0 5 88888888888888888888 0 6 000000000 4 6 2 4 3 888 0 8 22 888888 3 3 888888888 55 1 66 6 00 333 0 0
consensus : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( family-887 ) : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
gi|1 : AAAA-GAAACGCAAACTTGTTTTGAATTTGTA-ATATAACGTCC-AGGCACATG-GAC-AATAT--TTTAAAAATTAA-ATTT----GACATTGAGCTACGGTACATGTACCTCCGTGCACTG-TGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GC----------------A--GTTTTTGCAAGAGAGCGTGCGTCCGGGGTACTCA-TACACCATATGGG---CTGGTAAA-TCATAACAAATAAGCTACAAA-A-T--GAAAC----A--G--TAC-A------------------T-------A----------T------------TT---C------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGANT
gi|1 : ggaaT--GAAAC----A--G--TAC-A---AA--T------T-TC--------------------------------------------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGAATAAA---GTC-G-ATA---GC-------------TCT-GATATAATGTAAG-----TC-GTA----AGGTC--A---T-GT-AGTCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCNGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaaGACATTC-GTA----AGGTC--A---T-GT-AGCCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCAGATTAGTTGG-GGGTGTCAGAGACACGGGGAG-ATTAGG-C-GGCCGCCCCAG-CAGTGGACGC-TC-----GT---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCGTGCACTTCCGT----------AACCGATTTGAGGC-----------------GACGACATGTACGGGGACG---------GCACGCCACGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcnA-----------C-----------------GGG------------GACG---------GCACGCCAAGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCCAAGAACGG-TAG----CG-GTA-------GC-TA--------------T-AAAGCCAC-----------------------------------TACACAGAGGCGATGCCAATGTCGAA------GATTGTTTGCACGTGCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTT-ACGAGTCTCACCTCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGA------------CGATAGGTCTGAC--GCTGTATG-----------TA----------------A----CGGAAAA----------GCGACAGATCGGTAGGCGAAGGCATGTTA-CAG--GGCATATTTTAAGGC----GTGAAAACACCTCTCGTGG--G-TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGA-GACCACAGGTCCTTCCTCTTATCCA--TC-AACG-----------TAACTTTACGTCGC---A-TAGGAGA--ACGCGATCA-GGCCCCGTGTTGGAAGG----------CTT--------T--GT--------TG---------TGACTTT-------------CTGACTGAAAACACGTC-T-CAGATAATTATT---------------------T-GGCCTCCACGCAGTCCAGATCCCCC-C-TCGACC----ATTTGTTGGACGAACTGAACAAGGGGTTTA-GAAGTGCGTCAACGTCACATA-TAACGT------------CACAGGCCCGTATTC-TGGAGT-------GGAG-------T-A--------------GCAATA-----AA-TACCTCGATGGGGTCAATGTTAAGGAGAGTCA----------------G-AGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGCTACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTT----T----AACGCTATT--GTGCAAACGCCATT-TT-TGATAGA--ACAATA--AAAAGCATCGAAAT-GTATnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|10 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtATA--AATGTCA-TTCAACTCATGCAGTCCCTCATTC-ATGAGT-------GGAAT--A--AT-AA-CT-TTCA-AAGGACAATA-----AC-CACCTTGATGGGGTCAATGTTAAGGAGAATAT----------------G-AGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGCTACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATA----C----AACACTATT-CACGCTAACACCATTATG-TGATAGG--ACAAC---AAAATCATTGAAAT-GTATTCAGTAAAGATGAAATA
gi|11 : gagtgttataacaACACCAAGTACAT-AGCATTGA----TG-------AGTGTGTCGGAGTACTGTTACGAGTCG-GTT-------AC-AGGAGGTTCA-T---TG-AAAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTGCACATGCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGAACTAG-------TCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGGTAAGCAATA-TTCTGAT--TCT---TG------------------------------T--TCAACGGAAAGCGATAGGG-----GGTCAGT----TATGTTCTA-GA-CAG--GG-AT------AGG-------------ACCTCTCGT-GT--TTATCGATGACAATCTTGCAGCAGTGACTTATCattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|12 : TAAAGACGTACGTCTC-CG-ATTTCAG------------A-----------C-----------------GGT------------GACG---------GCAC---AAGT-TGTCCACACCCA----TGGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTATCAGTAGC-AGG-AGTTT--TCATTT-TAGGCCACAACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAG---------------AATGCAGTGGCTGATTGCACGTG-----------TTTCGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCG-AC-AG-------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTTGTGAT----GATA-TTTTGAC--GCT---TG-----------C
gi|13 : AA-GAAATGCAG----CTTCGGATTTCGTA-A---AAT-T----GACG---------AA-AC--TT----AATTAA-ATCT----AA-ACTG---------------------GGG---------AAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCA--GATTTTTCAGGAAAGCAAGCAAGCAGGGTATTTC-TGCATCATATATG---CTGATAA--TCATTACAACT-------GAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------CACAAGACTTTTTTT---TG-----A--A--GC----TGTT--GT-AGA------------GAGACATGCAC-CG-ATTGAATGTA---GTC-G-A-AC--GG-------------ata
gi|14 : cA-TGTTCTTCGC-TTAAA-T--TCAGC------GT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTTCAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCTTGCACCATAT-TGCCACTTGTAAAGTCAGTGGAAAT------CA---ATTCAGCTAC----A------AC-A---AA--C------TTTCC-------T----------C------------TT---CGAA---A--G--GA----AATT--GT-AGA------------GCGAAATGAAGTCGAAATAAAAGAG---AAC-T-ATTT--GC-------------TCT-G--CTAATGCATGGGCATTT-GCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACATG---AAGATCAAC---AAT-----gaaaggaccatt
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAGTACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TG-TTTTAAAT----AACGCTATT-CAGGCAAACGCCGTC-TG-TGA---G--ACAACA--AGAtctc
gi|16 : GGTGG-CACACACGCTACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATT----T----AACGCTATT-AACGTAAACACCGTC-TG-TGATAGG--GTAATA--TATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaacaacaacaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|17 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnat-AGGGACAATG-----CA-CAACTTGATTTGGTCAATATTAAGGAGACTAC----------------G-GGCATT---------GACTAA-AGTGCGGTATTGGCACACACATTGCTTTTTT---------A---AA-G---------------------T-TG-TTT----TTGCAAAGGC-ATT--ATGCAA---------TG--AATGGG--ATATCA--AAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|18 : ATAAAT-------AAACATT--GGA-C----A--G--TACTA---AA--T------TACCT-------A----------C------------ATGCAC------A--A--AC-----ATTCTGT-CGAACCATAATTGAGGCGAGATCCCG-CG-ATTGAATGAAGTGGTCGG-GTAG--GGATGC---------TCT-GA-ATAATGCCTGGAC--TCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTATGT-GGTGT---ACATT---A-GA--CAC---AAT------TTCC-TTTAGTTGG-GCGCTTCAGAACCTT--GGAG-ATatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|19 : CACACACGCTACTGATTT-GATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTT----A----AACGCTATC-AACGTAAACACC-TC-TGATGATAGGGTACTATATTAAA-----CAAAACAATATCCA-TAATGTTGAAATAagtgaactgcaaaagtgatgtccg
gi|2 : AAAG-GAAACGCAA----GTTCGTATTTTGTA-ATATAACGTTT-AGACACGTG-GAC-AA-AT--TA----TATTAA-ATTT----GACACTGATCTAC-----------TTCTGTGCATTG-TGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCA--GATTTTTCAAGAAAGCATGCATTCAGGATACTCC-AGCAGCTTATGTT---TTGGTAAA-TCATGATAAAT------TGAACATA--TGAAT----A--C--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GT----GATT--AG-AGA------------GCGAAATACCG-AG-ATTGAATGAA---GTC-G-ATAG--GG-------------TCT-G--ATAATACAAGGCCCTTT-GCA----ACGTC--A---T-GT-AGCCA-AGCA---ATTT-GGTGT---ACATG---CGAA--AAC---AAT-----ATCCCGTTTAATTGG-GCGTCTCAGAGCCACAGCAAG-ATT-GA-T-GACCGTCCTAG-GAG-AGAGGC-CT-----AG---GCGTTATG---TC--------AAGATAGGGGCATATGCCTCTCGCATCTGCAT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----CAGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTT-------GT-TGG-AGTTT--T---T----GACCAAAACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTG--CATGCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAG-ACGCT-------TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGGTGATTGATA-TTCTGAC--ACT---TG-----------CG----------------AT--TCGGGGAA----------G-----AGCTTGT----TATGGTATG-GG-CAG--AG-ATGTTTCAAGGC----ATGGAAACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGA-GATCGCAAGTCCTTCCTCGTATCCC--TC-AACATATTATGTTGTTAACC-TACGCTGC---AGCAAGACA--ACGCG---A-GGTCCCGTGTTGCTACA----------GTT--------T--GC--------TG---------TGA--TT-------------C--A--------GCGTC-C-CAGTTCTTGATT---------------------T-G-------------------TTCCC-A-TCCAGC----ATTTGTGGGAAGATCTGGACAGAAGGGATAAGAAACCAGTCAACGTCCCATA-TAACGTTC-CTCAATTAACGCAGGCCCTTATTC-AGGATT-------GAAG---GAAATAA--TT-GTCA-ACGGACAATA-----AT-CACCTTGATGGAGTCAATGCTGAGGAGAGTAT----------------G-AATAGT---------GACTGA-AACCAGGAGTAGGAAAACACACCACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTT----A----AACGCTATT-CACACAAACGCCGTC-TG-TGATAGA--ACAACA--AAAATCACCAAAAT-GTATTCAGTAATGATGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|20 : ----------------AT--TTGGAGGA----------G-----GGTCTGT----TATGGTAAG-TG-CAT--GG-ATATCTCAAA------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGA-GACCAAACGTCTTTTCTCTTATCCA--GC-AGCG-----------TAACCTTAAGTTAC---AGCAGGACA--ACGCG---G-GGCCACATGTTGCTTGG----------GAT--------T--GT--------CG---------TGA--CT-------------C--T--------CTGAC-T-CAAAACTTGATT---------------------G-G-------------------CCACC-A-
gi|21 : ------A--A--GC----GATT--GT-AGA------------GCAAAATCCCG-TG-ATTGATAGGG---GTT-GGACAATTGC-------------TCT-T--ATAATGCAGGGGCATTT-GCA----ACGTC--ATATT-GT-AACCT-AGCA---ATAT-AA------ACATG---AG-----------------------GCTTAGTTGC-ACATCTCATAGCCACA------ATT-AA-G-GA--GACTTGGAAAGCCAACGCATT-----GCATGGCG--ACG---TC--------AAAGTAGACGCACACGTCTTTTGCACTTCCAT----------AA-----------C-----------------caca
gi|22 : g-AGGAGT-------GGAATATG--AT-AT-CC-CTCT-AAGGACAATATCATAAA-CACCTTGATGGGGTCA--GTTAA-GAGA-------------------------------------GAC------------GT--GCACACACTCTACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACcaattt
gi|23 : CAATA-----AA-CACCTTGATG---------TTAAGGAGAGTAATAACACTTATAAAATTGTAGCAAT---------GACCGA-AGCTAGGTATGGACACACACTCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTT----T----AACGTCCTT-TATACAGGCGCCGTC-TG-TGATAGG--ACAACG--CATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|24 : C-TTCACCATATATG---CTGATAAA-TCATTACAAAT------CAAACATT--GGAGC----A--G--TAC-A---AA--T------CAGCT-------A----------C------------AC---A------AC-A--TC----TCTT--TT-----------------CGAA-----G-TA-ATTG--TGAA---TTC-G-ATAG--GG-------------T-------------AGGGCCATT--GC--------TCTGA---T-GT-AGCCC-AACA---ATAT-GGTGT---ACATGCATAAGA--GACATGAAT-----ATTCC
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GCTTGCTTTCAGC--------------AAAGTATGCATCCAGGGTACTCC-TGCACC--ATGCT---CTGGTAA---------------------AACATT--GAAAT----A--GTTTGC-A---AA--T------CAGCC-------A----------CACATTTCT----TT---T------A--GATGC----GATT--AT-AGA------------GCGAAATtctttgaatggac
gi|26 : tAAA-GAAATGCAA----ATTTGGATTTTGTA-AGAT--------------GTG-GGTGAA-A---------GATAAA-ATCT----GACACTGAGCT---------------CCAAACACTG-TAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GC------TGCTTCCAGCA--GATTTTTTAAGa
gi|27 : atatactagcaggGT-T-TTGGTACTCA----TGGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTT-------ACATGA-GATTCA-T---GT-AAGGCCACGACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|28 : tcaccaatttcagacgtcgtcggagaagtaacataaatAGAACCACAGGAAG-ATT-GAGT-GACCATCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------------GTGACGTAAGTCTCTCGCACCTCCGTTACAGATTCAGA-----------C-----------------GGT------------GACG---------GCACGCCAAGT-TATAGGTATTC
gi|29 : AAAGCATGCATACGGTGTACCAC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAC------TGAACATC--AGAAT----G--G--TAC-A---AA--T------CAGCT-------ATAAATTTTTTC------------TT---G------A--T--TT----GATT--GA-AGA------------GCAAAATGCCtgtactctgataggacaa
gi|3 : AAGA-GAAACGCAA----GTTCGGATTTTTTA-ATA------------CACGTT-GATTAA-AT--TT----AATTAA-ATTT----GACGCTGAACTAC-----------CACCGGGCGCAG-TGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCA--TACTTTTCAAGAAAGCGTGCATCCGGGGTGCTCC-TGCACCCTATGTG---CTGGTAGA-TCATTACATGT------CGAGCATT--GGAACTGGAACTG--TAC-A---AA--T------CAGCTTCGCAACATTT-------C------------TT---T------ACCAT-GC----GATT--GT-AGA------------ACAAAATGCCG-CG-ATTGCATGAT---GTA-G-ATTC-----------------TCC-G--ACAATGCAGGAGCATTC-GCACGCAACGTC--A---T--T-AACCC-AGCA---ATAT-GG-GT---AAAAG---GGGAC-AAC---AATTAAATATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-GTT-GAAT-GACTGCCCCAG-GAGCGAACAC-CC-----AC---GCGTTACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGTGTCTCCGT----------AA-----------CCAGCCG-----------GA-------------GACG---------GCACACCAGGC-TGTCGGTCCTCA----TTTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTT-------GC-AGG-AGTTCCAT---TT-AAGGCCACGGCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACATGCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTGA----CGTCTTGTTCACTG-ATGAG-------TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGGTGAGCGATA-TTTTGAC--GCA---TG-----------CGTAACGAAAAGCGACAAAT--TC-GGGGA----------G-----GGTTTGT----TATGGTATG-GG-CAG--GG-ATATCTCGAGGC----GTGAAAACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGA-AATCACGCGTACTTCCTCTTAACCA--TC-AACG-----------TAACATTAAGCTGC---AGCAGGACA--ACGCG---ATGCCCCCATGTTATTAGG----------GTT--------T--GT--------CG---------TGA--CTTTCTGGTTCAAAAC--A--------ACATC-C-CAGTGCTTGATTGGCCACCATACAGTCCAGATTT-G-------------------TCCCTAA-TCGAGC----ACTTGTGAGATGAGCTGAACAGGAAGGTTAGAAAGCGCATCAACGTCTTATA-TAACATTG-CTCAACTCACGAAGGACCTTATTC-AGGAGT---------------------------------GGATAATA-----AA-CACCTTGATGGCGTCCATGTTAAGTAGAGCAA----------------G-AGCAGT---------GACTGA-AGCCAGGAGTGctaaatggaaaag
gi|30 : cggaaGC--GGA------CGGTACCCT-CGATTT----T----AACACTATT-TAGGCAAACACTGTa
gi|31 : tGTATCTATCAACGTTGTG-TG-GC-----TTCTTACTCGCA---TGTAAATGGAAAGCG----------------ACAATTGGGGG-----------G-----GGTCTGA----AATGATATG-GGCCAGCCAG-ATAACTCA--GC----A-GAAAACATCTTTTGTattcaataatgatgtaataatcgagaaacccaaacaataaactaatccttcacgaaacatgaaaaataataaccatcgaaaataaac
gi|32 : agttagatgaCAGGATCAGGTCTTGA-GACCACACGTCC--------ATCAAGTTC-AACG-----------TAACCTTACACTGC---ATCGGGACA--ATGCA---A-GTCTCAATGCCGATAGG----------GTT--------T---T--------AA---------TGA--TT-------------
gi|33 : ----------GTT--------T--GT--------C------------------------------C--A--------TCATA---CAG-TCCAGATT---------------------T-G-------------------TCCTC-AATCGAGC----ATTTGTGGGACGAGCTGGACAGGA-GCTTAGGAAGttcttgctcaaaacaacatct
gi|34 : ggtttgtcatgactttctagctgaagaaaatgtcccagttcttAAAA-GAAATGCAA----TTTCTGATTTTGTA-ATATAACTTTT-AGACTCGTG-GATAAA-AT--TT----AATCAAGGTTT----GTCA-TG----AC-----------TTTCTA--GCTGAAGAAAA-TGT
gi|36 : tactagtggaaa-------------C--A--------ACGTT-T--AGGTATTGATT---------------------T-G-------------------CCGAC-A-TTCAGTCCAGATTT-TGGGAAATGCTGAGCAGGAGGGTTGATAAGCACGTAAAC
gi|37 : ttgttttgacactccagctctaaaTTGGTACTCA----TAGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATC--GTT-------AC-ATG-AGATCCAT---GT-AAGGCCATGACGTCTCTA------TGATGGCCCGCTACT----TACACa
gi|38 : ---AAT-----ATTCCGTTTAGCTGGTGAATGT-AAAGCCACATGGAGTATG-GG-T-GACCGTCCAAG-GAGCGGACGC-CCTTGCAGT---ACGTCACGACCTC--------AAGATAGAG
gi|4 : tGCAG----ATTCGGAATTTCTCTATACAGC-TT--AGA-ATGTTTGTC-GA-ATATTT----GAT--A-ATCT----AATAC-GATGTAC-----------TTCCG-GTTTTT-TGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCT-GCTTTCAGGA--AACTTTACA-GAAAGCGCGCAATCGCGTTTATCC-TGCAC-ATTTATG---CTG-TAAA-TCATAACA--T------T-AATATT--AGAAT----T--A--TAT-ATTTAAC-T------CATCC-------A----------T------------TT---TGTTATGA--A--GTCTTTATTT--GTTAGA------------GTGAATTGCCG-CG-ATTGAATGAA---GTA-A-GTAT--GG-------------TTTAG--AACATTCAAGG-CATG--GCA----ACGTC--A---T-TT-ATCCCTAACA---AAAT-GGTAC---TCATC---AGAC--AAC---AA----------CGTATCGGTGG-GCGTCTCAGAGCAACAGGGGG-TTT-GA-TTAACCGTCCTAA-GAGCA-----------------------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGT----------AA-----------CCGATTTCACATATTTCGGAC------------GACGCCGGATATGGCACGCCAAGT-TGT-GGCACTCA----TGATCGGTCATTG--------AACAGTTAGGAATCG-GTT-------GC-TGG-GGTTTCAT---TT-AAGGCCACGACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTGCATATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTG-ATGAG-------TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTGTa
gi|5 : ----------------AT--TCGGGGGA----------T-----GGTCTGT----TATGGTTTG-AG-CAG--GG-ATATCTCAAGGC----ATGAAAACACCTCTCGTAGT---TACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGA-GACCACGCATACTTCCTCTTATCCA--TC-AATG-----------TAACCTTTCGTTGCGCCAACAGGACA--ACGCG---A-GGTCCCATGTTCCT--G----------GCTGAAAACCCT--GTT-------CT---------TGA--TT-------------G--A--------TCACCATGCAG-TCCAGATT---------------------A-G-------------------TCCCG-AATCGAAC----AATTGTGAGGTGAGTTGGACAGGAGGGTTAGGAAGCACATCAACGTCCCATA-TAACGTCG-TTCAACTCATGCAGGCACTTATTC-AGGTGT-------GGAAT--G--AT-A--TTCCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGC---------CAA----------------G-AACATC---------GACTGA-AGCCAGGGATGGG--CACATGCTACTGGT----A--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTT----T----GACGATATT-CACGCAAATGCCG---TA-TGATAGG--ACATAA--AAAATCTTAAAAAT-GTATTCAGTAATGATGAAACAtttgac
gi|6 : taacggaaagcgacatATCAGGTCTTGATGAC---ACATTTTTCCTTTTATCCA--TCGAAAG-----------CAAC-TTACGTTTG---AGGAGGATACTAAGCG---A-AGT---ATG---CTAGGTTTGTCGTGAGTT--------TCTGTAATAACAACGACAGTTCTTTGA--TT-------------G--A--------ACAAA-T-TAAGTTTAGATT---------------------TTG-------------------TCGCA-A-TCGAGC----GT--GTGGAACGAGTTGGACAGAAGG-TTAGGAAGTGCGTCAACGT-ACATA-TA--GTCGTCTCAATTCA-ACAGGGCCTTATTCAAGGAGT-------GGAGAT-A--AT-ATTCT-CTCGCAAGGACA--A-----AA-C-CTTGGATGAGG-CAGTGTT--CGAGA-CAA----------------G-AGCAGTG--------GACTAAGAGCCAGGGGAGGGC-CA---GCTA-TGA-TTGGAT--------------T--GTT------GGGTTCCC--TG-TTC----------ATGTTGTTGCATGCAAACACTGT--TG-TGA-AGG---CAAC----AAATCATAAAAAT-GTAATCAatctagacacctaaataatgaacta
gi|7 : AGCGGATGT-CC-----GC---GCGTTACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCGATCCTCCGT----------AA-----------CT----------------GATTCCA--------GATG---------ACACACTAAGC-TGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-GGG-GGTTT--TA--TTGAAAGCCACAACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTGCACATGCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTG-ACGAG-------TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGTT-TGAATACCGAAA-AGC-GAC--A-------------------G----------------AT--TCAAAGGA----------G-----AGTCTGT----TATCGTATT-GG-GAG--GA-AAACCTGAAGGCACAAATAAAAACACCTCTCGTG---GTTATACATGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : GAGC----ATTTGTAGGACGAGCTGGACAGGAGGGTTCGGAAGTGCGTCAGTGTTGCGTAATATTGTCG-CTTAACTCAAGCATGCCGTTATTC-A--AGTACATATAGAAT---G--AT-AT-CT-CTCA-AAGGACAATA-----AAACACATCTAAGGGTTCAATTTTAATAAGAGTAA----------------G-AAAAGA---------AAGAGA-AGCCATGGATGAGCACACAAGGTACTGATT-GGGTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTT----T----AACGCTATT-CACGCAAACACCGCC-TG-CGATAGG--ACAACA--AAAATCATCAAAAT-ATAGTCAGTAATGATTAAATActtgcgtaac
gi|9 : tgttatggtacgtcttctttattggtcatattcaatacaAAAATGAAACTTAA----GTTCAGATTTTGCA-ATATAGC-TTTTAGACACGTG-GACGAA-AT--TT----GATTAT-TTTTTTTAGACA--GATCGAC-----------TTCCGAGCTCTG-TGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCA--GATTTTTCA------------TTCGGGGCACTCC-TTCACAACATGTG---CTAGTAAA-TAATTACAAAT------CGAACAAT--GGAAC----T--G--TGC-A---AAGCTGCACAACATTT-------G----------T------------TT---TCG----A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATTAT---GTC-A-ACAA--GGTTAGGACCATTGCTCT-G--GAAATACGTGGGTATCA-GCA----ACGTT--A---T-GT-ACCTC-AGCA---ATAT-GGTGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG
Alignments
lowQualScore : 11111 333333333 2 11111 1111 2222222222222222222 1111 111111111 11111111 1111111111 88888888888888888888888888888888888888888888888888888888888888888888888 111111111111 333333333333333333 11 11 2222222222 1111111 111 1111111111 33333333 99999999999999999999999999999999999999999999999999999999 222222222 1111111 333333333 111111 222222222 1111111 11111 666666666666666666666666666666666666666 2222222222222222 1111 111111 33333 22222222222 111 111 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1111 666666666666666666666666666 11111 22222222222222222222 222222222 111111111
lowQualScore : 5 00000 5 0 111111111 1 5 0 5 66 11111 2 5 0000 44 8888888888888888888 0000 5 4 0 999 66 4 4 777 444444444 777777 888 1 2 66 1 6 0 4 0 777 44 1 88888888 44 0000000000 3 555 55555555555555555555555555555555555555555555555555555555555555555555555 44 3 555555555555 3 3 777 4 4 555555555555555555 4 00 1 1 5 0 11 8888 777777 4 4 4 777 4 0 777 8888888888 777 3333333 5 2 5 5 333 0 5 0 5 8888888888 0 888 66666666 0 1 66666666666666666666666666666666666666666666666666666666 000000000 0 4 1 6 8888 1 4 4444444 55 4 555555555 0 222222 2 9999 1 4 0 0 222222222 4 5 0 8888888 1 22 66666 5 333333333333333333333333333333333333333 66 0 7777777777777777 0000 5 5 66 5 888888 22222 1 5 77 5 77777777777 3 000 3 77 000 5 0 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 5 0 0000 0 2 0 22 5 1 666 5 5 222222222222222222222222222 66 0 00000 4 2 77777777777777777777 4 1 000000000 1 3 0 0 3 555 1 3 44 888888 3 3 444444444 88 0 55 3 55 666 4 1
lowQualScore : . ..... . . ......... . . . . .. ..... . . .... .. ................... .... . . . ... .. . . ... ......... ...... ... . . .. . . . . . ... .. . ........ .. .......... . ... ....................................................................... .. . ............ . . ... . . .................. . .. . . . . .. .... ...... . . . ... . . ... .......... ... ....... . . . . ... . . . . .......... . ... ........ . . ........................................................ ......... . . . . .... . . ....... .. . ......... . ...... . .... . . . . ......... . . . ....... . .. ..... . ....................................... .. . ................ .... . . .. . ...... ..... . . .. . ........... . ... . .. ... . . . ............................................................................................................................................ . . .... . . . .. . . ... . . ........................... .. . ..... . . .................... . . ......... . . . . . ... . . .. ...... . . ......... .. . .. . .. ... . .
lowQualScore : 7 99999 0 1 111111111 4 0 0 0 99 88888 2 0 6666 66 2222222222222222222 9999 0 0 1 000 11 7 4 888 444444444 666666 000 1 0 11 9 2 9 0 9 000 88 0 88888888 66 4444444444 3 888 55555555555555555555555555555555555555555555555555555555555555555555555 22 1 888888888888 6 6 000 0 0 999999999999999999 4 66 1 0 7 7 33 5555 444444 0 0 0 000 0 8 888 0000000000 000 1111111 7 5 0 7 777 4 7 2 0 6666666666 1 888 22222222 1 4 44444444444444444444444444444444444444444444444444444444 000000000 9 0 4 5 5555 9 4 4444444 44 4 777777777 9 888888 1 4444 7 0 4 4 999999999 0 7 7 6666666 0 55 33333 7 111111111111111111111111111111111111111 99 2 5555555555555555 6666 0 0 99 0 000000 33333 4 7 99 7 11111111111 0 000 0 99 000 7 1 7 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 0 6666 2 5 2 00 7 7 999 3 0 222222222222222222222222222 66 7 00000 0 5 88888888888888888888 0 6 000000000 4 6 2 4 3 888 0 8 22 888888 3 3 888888888 55 1 66 6 00 333 0 0
consensus : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( family-887 ) : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
gi|1 : AAAA-GAAACGCAAACTTGTTTTGAATTTGTA-ATATAACGTCC-AGGCACATG-GAC-AATAT--TTTAAAAATTAA-ATTT----GACATTGAGCTACGGTACATGTACCTCCGTGCACTG-TGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GC----------------A--GTTTTTGCAAGAGAGCGTGCGTCCGGGGTACTCA-TACACCATATGGG---CTGGTAAA-TCATAACAAATAAGCTACAAA-A-T--GAAAC----A--G--TAC-A------------------T-------A----------T------------TT---C------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGANT
gi|1 : ggaaT--GAAAC----A--G--TAC-A---AA--T------T-TC--------------------------------------------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGAATAAA---GTC-G-ATA---GC-------------TCT-GATATAATGTAAG-----TC-GTA----AGGTC--A---T-GT-AGTCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCNGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaaGACATTC-GTA----AGGTC--A---T-GT-AGCCC-ACTA---ATAT-TGTGT---ACATG---AG-----AC---AAC-----ATTCAGATTAGTTGG-GGGTGTCAGAGACACGGGGAG-ATTAGG-C-GGCCGCCCCAG-CAGTGGACGC-TC-----GT---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCGTGCACTTCCGT----------AACCGATTTGAGGC-----------------GACGACATGTACGGGGACG---------GCACGCCACGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcnA-----------C-----------------GGG------------GACG---------GCACGCCAAGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCCAAGAACGG-TAG----CG-GTA-------GC-TA--------------T-AAAGCCAC-----------------------------------TACACAGAGGCGATGCCAATGTCGAA------GATTGTTTGCACGTGCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTT-ACGAGTCTCACCTCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGA------------CGATAGGTCTGAC--GCTGTATG-----------TA----------------A----CGGAAAA----------GCGACAGATCGGTAGGCGAAGGCATGTTA-CAG--GGCATATTTTAAGGC----GTGAAAACACCTCTCGTGG--G-TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGA-GACCACAGGTCCTTCCTCTTATCCA--TC-AACG-----------TAACTTTACGTCGC---A-TAGGAGA--ACGCGATCA-GGCCCCGTGTTGGAAGG----------CTT--------T--GT--------TG---------TGACTTT-------------CTGACTGAAAACACGTC-T-CAGATAATTATT---------------------T-GGCCTCCACGCAGTCCAGATCCCCC-C-TCGACC----ATTTGTTGGACGAACTGAACAAGGGGTTTA-GAAGTGCGTCAACGTCACATA-TAACGT------------CACAGGCCCGTATTC-TGGAGT-------GGAG-------T-A--------------GCAATA-----AA-TACCTCGATGGGGTCAATGTTAAGGAGAGTCA----------------G-AGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGCTACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTT----T----AACGCTATT--GTGCAAACGCCATT-TT-TGATAGA--ACAATA--AAAAGCATCGAAAT-GTATnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|10 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtATA--AATGTCA-TTCAACTCATGCAGTCCCTCATTC-ATGAGT-------GGAAT--A--AT-AA-CT-TTCA-AAGGACAATA-----AC-CACCTTGATGGGGTCAATGTTAAGGAGAATAT----------------G-AGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGCTACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATA----C----AACACTATT-CACGCTAACACCATTATG-TGATAGG--ACAAC---AAAATCATTGAAAT-GTATTCAGTAAAGATGAAATA
gi|11 : gagtgttataacaACACCAAGTACAT-AGCATTGA----TG-------AGTGTGTCGGAGTACTGTTACGAGTCG-GTT-------AC-AGGAGGTTCA-T---TG-AAAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTGCACATGCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGAACTAG-------TCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGGTAAGCAATA-TTCTGAT--TCT---TG------------------------------T--TCAACGGAAAGCGATAGGG-----GGTCAGT----TATGTTCTA-GA-CAG--GG-AT------AGG-------------ACCTCTCGT-GT--TTATCGATGACAATCTTGCAGCAGTGACTTATCattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|12 : TAAAGACGTACGTCTC-CG-ATTTCAG------------A-----------C-----------------GGT------------GACG---------GCAC---AAGT-TGTCCACACCCA----TGGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTATCAGTAGC-AGG-AGTTT--TCATTT-TAGGCCACAACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAG---------------AATGCAGTGGCTGATTGCACGTG-----------TTTCGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCG-AC-AG-------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTTGTGAT----GATA-TTTTGAC--GCT---TG-----------C
gi|13 : AA-GAAATGCAG----CTTCGGATTTCGTA-A---AAT-T----GACG---------AA-AC--TT----AATTAA-ATCT----AA-ACTG---------------------GGG---------AAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCA--GATTTTTCAGGAAAGCAAGCAAGCAGGGTATTTC-TGCATCATATATG---CTGATAA--TCATTACAACT-------GAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------CACAAGACTTTTTTT---TG-----A--A--GC----TGTT--GT-AGA------------GAGACATGCAC-CG-ATTGAATGTA---GTC-G-A-AC--GG-------------ata
gi|14 : cA-TGTTCTTCGC-TTAAA-T--TCAGC------GT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTTCAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCTTGCACCATAT-TGCCACTTGTAAAGTCAGTGGAAAT------CA---ATTCAGCTAC----A------AC-A---AA--C------TTTCC-------T----------C------------TT---CGAA---A--G--GA----AATT--GT-AGA------------GCGAAATGAAGTCGAAATAAAAGAG---AAC-T-ATTT--GC-------------TCT-G--CTAATGCATGGGCATTT-GCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACATG---AAGATCAAC---AAT-----gaaaggaccatt
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAGTACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TG-TTTTAAAT----AACGCTATT-CAGGCAAACGCCGTC-TG-TGA---G--ACAACA--AGAtctc
gi|16 : GGTGG-CACACACGCTACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATT----T----AACGCTATT-AACGTAAACACCGTC-TG-TGATAGG--GTAATA--TATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaacaacaacaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|17 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnat-AGGGACAATG-----CA-CAACTTGATTTGGTCAATATTAAGGAGACTAC----------------G-GGCATT---------GACTAA-AGTGCGGTATTGGCACACACATTGCTTTTTT---------A---AA-G---------------------T-TG-TTT----TTGCAAAGGC-ATT--ATGCAA---------TG--AATGGG--ATATCA--AAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|18 : ATAAAT-------AAACATT--GGA-C----A--G--TACTA---AA--T------TACCT-------A----------C------------ATGCAC------A--A--AC-----ATTCTGT-CGAACCATAATTGAGGCGAGATCCCG-CG-ATTGAATGAAGTGGTCGG-GTAG--GGATGC---------TCT-GA-ATAATGCCTGGAC--TCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTATGT-GGTGT---ACATT---A-GA--CAC---AAT------TTCC-TTTAGTTGG-GCGCTTCAGAACCTT--GGAG-ATatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|19 : CACACACGCTACTGATTT-GATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTT----A----AACGCTATC-AACGTAAACACC-TC-TGATGATAGGGTACTATATTAAA-----CAAAACAATATCCA-TAATGTTGAAATAagtgaactgcaaaagtgatgtccg
gi|2 : AAAG-GAAACGCAA----GTTCGTATTTTGTA-ATATAACGTTT-AGACACGTG-GAC-AA-AT--TA----TATTAA-ATTT----GACACTGATCTAC-----------TTCTGTGCATTG-TGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCA--GATTTTTCAAGAAAGCATGCATTCAGGATACTCC-AGCAGCTTATGTT---TTGGTAAA-TCATGATAAAT------TGAACATA--TGAAT----A--C--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GT----GATT--AG-AGA------------GCGAAATACCG-AG-ATTGAATGAA---GTC-G-ATAG--GG-------------TCT-G--ATAATACAAGGCCCTTT-GCA----ACGTC--A---T-GT-AGCCA-AGCA---ATTT-GGTGT---ACATG---CGAA--AAC---AAT-----ATCCCGTTTAATTGG-GCGTCTCAGAGCCACAGCAAG-ATT-GA-T-GACCGTCCTAG-GAG-AGAGGC-CT-----AG---GCGTTATG---TC--------AAGATAGGGGCATATGCCTCTCGCATCTGCAT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----CAGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTT-------GT-TGG-AGTTT--T---T----GACCAAAACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTG--CATGCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAG-ACGCT-------TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGGTGATTGATA-TTCTGAC--ACT---TG-----------CG----------------AT--TCGGGGAA----------G-----AGCTTGT----TATGGTATG-GG-CAG--AG-ATGTTTCAAGGC----ATGGAAACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGA-GATCGCAAGTCCTTCCTCGTATCCC--TC-AACATATTATGTTGTTAACC-TACGCTGC---AGCAAGACA--ACGCG---A-GGTCCCGTGTTGCTACA----------GTT--------T--GC--------TG---------TGA--TT-------------C--A--------GCGTC-C-CAGTTCTTGATT---------------------T-G-------------------TTCCC-A-TCCAGC----ATTTGTGGGAAGATCTGGACAGAAGGGATAAGAAACCAGTCAACGTCCCATA-TAACGTTC-CTCAATTAACGCAGGCCCTTATTC-AGGATT-------GAAG---GAAATAA--TT-GTCA-ACGGACAATA-----AT-CACCTTGATGGAGTCAATGCTGAGGAGAGTAT----------------G-AATAGT---------GACTGA-AACCAGGAGTAGGAAAACACACCACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTT----A----AACGCTATT-CACACAAACGCCGTC-TG-TGATAGA--ACAACA--AAAATCACCAAAAT-GTATTCAGTAATGATGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|20 : ----------------AT--TTGGAGGA----------G-----GGTCTGT----TATGGTAAG-TG-CAT--GG-ATATCTCAAA------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGA-GACCAAACGTCTTTTCTCTTATCCA--GC-AGCG-----------TAACCTTAAGTTAC---AGCAGGACA--ACGCG---G-GGCCACATGTTGCTTGG----------GAT--------T--GT--------CG---------TGA--CT-------------C--T--------CTGAC-T-CAAAACTTGATT---------------------G-G-------------------CCACC-A-
gi|21 : ------A--A--GC----GATT--GT-AGA------------GCAAAATCCCG-TG-ATTGATAGGG---GTT-GGACAATTGC-------------TCT-T--ATAATGCAGGGGCATTT-GCA----ACGTC--ATATT-GT-AACCT-AGCA---ATAT-AA------ACATG---AG-----------------------GCTTAGTTGC-ACATCTCATAGCCACA------ATT-AA-G-GA--GACTTGGAAAGCCAACGCATT-----GCATGGCG--ACG---TC--------AAAGTAGACGCACACGTCTTTTGCACTTCCAT----------AA-----------C-----------------caca
gi|22 : g-AGGAGT-------GGAATATG--AT-AT-CC-CTCT-AAGGACAATATCATAAA-CACCTTGATGGGGTCA--GTTAA-GAGA-------------------------------------GAC------------GT--GCACACACTCTACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACcaattt
gi|23 : CAATA-----AA-CACCTTGATG---------TTAAGGAGAGTAATAACACTTATAAAATTGTAGCAAT---------GACCGA-AGCTAGGTATGGACACACACTCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTT----T----AACGTCCTT-TATACAGGCGCCGTC-TG-TGATAGG--ACAACG--CATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|24 : C-TTCACCATATATG---CTGATAAA-TCATTACAAAT------CAAACATT--GGAGC----A--G--TAC-A---AA--T------CAGCT-------A----------C------------AC---A------AC-A--TC----TCTT--TT-----------------CGAA-----G-TA-ATTG--TGAA---TTC-G-ATAG--GG-------------T-------------AGGGCCATT--GC--------TCTGA---T-GT-AGCCC-AACA---ATAT-GGTGT---ACATGCATAAGA--GACATGAAT-----ATTCC
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GCTTGCTTTCAGC--------------AAAGTATGCATCCAGGGTACTCC-TGCACC--ATGCT---CTGGTAA---------------------AACATT--GAAAT----A--GTTTGC-A---AA--T------CAGCC-------A----------CACATTTCT----TT---T------A--GATGC----GATT--AT-AGA------------GCGAAATtctttgaatggac
gi|26 : tAAA-GAAATGCAA----ATTTGGATTTTGTA-AGAT--------------GTG-GGTGAA-A---------GATAAA-ATCT----GACACTGAGCT---------------CCAAACACTG-TAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GC------TGCTTCCAGCA--GATTTTTTAAGa
gi|27 : atatactagcaggGT-T-TTGGTACTCA----TGGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTT-------ACATGA-GATTCA-T---GT-AAGGCCACGACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|28 : tcaccaatttcagacgtcgtcggagaagtaacataaatAGAACCACAGGAAG-ATT-GAGT-GACCATCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------------GTGACGTAAGTCTCTCGCACCTCCGTTACAGATTCAGA-----------C-----------------GGT------------GACG---------GCACGCCAAGT-TATAGGTATTC
gi|29 : AAAGCATGCATACGGTGTACCAC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAC------TGAACATC--AGAAT----G--G--TAC-A---AA--T------CAGCT-------ATAAATTTTTTC------------TT---G------A--T--TT----GATT--GA-AGA------------GCAAAATGCCtgtactctgataggacaa
gi|3 : AAGA-GAAACGCAA----GTTCGGATTTTTTA-ATA------------CACGTT-GATTAA-AT--TT----AATTAA-ATTT----GACGCTGAACTAC-----------CACCGGGCGCAG-TGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCA--TACTTTTCAAGAAAGCGTGCATCCGGGGTGCTCC-TGCACCCTATGTG---CTGGTAGA-TCATTACATGT------CGAGCATT--GGAACTGGAACTG--TAC-A---AA--T------CAGCTTCGCAACATTT-------C------------TT---T------ACCAT-GC----GATT--GT-AGA------------ACAAAATGCCG-CG-ATTGCATGAT---GTA-G-ATTC-----------------TCC-G--ACAATGCAGGAGCATTC-GCACGCAACGTC--A---T--T-AACCC-AGCA---ATAT-GG-GT---AAAAG---GGGAC-AAC---AATTAAATATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-GTT-GAAT-GACTGCCCCAG-GAGCGAACAC-CC-----AC---GCGTTACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGTGTCTCCGT----------AA-----------CCAGCCG-----------GA-------------GACG---------GCACACCAGGC-TGTCGGTCCTCA----TTTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTT-------GC-AGG-AGTTCCAT---TT-AAGGCCACGGCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACATGCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTGA----CGTCTTGTTCACTG-ATGAG-------TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGGTGAGCGATA-TTTTGAC--GCA---TG-----------CGTAACGAAAAGCGACAAAT--TC-GGGGA----------G-----GGTTTGT----TATGGTATG-GG-CAG--GG-ATATCTCGAGGC----GTGAAAACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGA-AATCACGCGTACTTCCTCTTAACCA--TC-AACG-----------TAACATTAAGCTGC---AGCAGGACA--ACGCG---ATGCCCCCATGTTATTAGG----------GTT--------T--GT--------CG---------TGA--CTTTCTGGTTCAAAAC--A--------ACATC-C-CAGTGCTTGATTGGCCACCATACAGTCCAGATTT-G-------------------TCCCTAA-TCGAGC----ACTTGTGAGATGAGCTGAACAGGAAGGTTAGAAAGCGCATCAACGTCTTATA-TAACATTG-CTCAACTCACGAAGGACCTTATTC-AGGAGT---------------------------------GGATAATA-----AA-CACCTTGATGGCGTCCATGTTAAGTAGAGCAA----------------G-AGCAGT---------GACTGA-AGCCAGGAGTGctaaatggaaaag
gi|30 : cggaaGC--GGA------CGGTACCCT-CGATTT----T----AACACTATT-TAGGCAAACACTGTa
gi|31 : tGTATCTATCAACGTTGTG-TG-GC-----TTCTTACTCGCA---TGTAAATGGAAAGCG----------------ACAATTGGGGG-----------G-----GGTCTGA----AATGATATG-GGCCAGCCAG-ATAACTCA--GC----A-GAAAACATCTTTTGTattcaataatgatgtaataatcgagaaacccaaacaataaactaatccttcacgaaacatgaaaaataataaccatcgaaaataaac
gi|32 : agttagatgaCAGGATCAGGTCTTGA-GACCACACGTCC--------ATCAAGTTC-AACG-----------TAACCTTACACTGC---ATCGGGACA--ATGCA---A-GTCTCAATGCCGATAGG----------GTT--------T---T--------AA---------TGA--TT-------------
gi|33 : ----------GTT--------T--GT--------C------------------------------C--A--------TCATA---CAG-TCCAGATT---------------------T-G-------------------TCCTC-AATCGAGC----ATTTGTGGGACGAGCTGGACAGGA-GCTTAGGAAGttcttgctcaaaacaacatct
gi|34 : ggtttgtcatgactttctagctgaagaaaatgtcccagttcttAAAA-GAAATGCAA----TTTCTGATTTTGTA-ATATAACTTTT-AGACTCGTG-GATAAA-AT--TT----AATCAAGGTTT----GTCA-TG----AC-----------TTTCTA--GCTGAAGAAAA-TGT
gi|36 : tactagtggaaa-------------C--A--------ACGTT-T--AGGTATTGATT---------------------T-G-------------------CCGAC-A-TTCAGTCCAGATTT-TGGGAAATGCTGAGCAGGAGGGTTGATAAGCACGTAAAC
gi|37 : ttgttttgacactccagctctaaaTTGGTACTCA----TAGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATC--GTT-------AC-ATG-AGATCCAT---GT-AAGGCCATGACGTCTCTA------TGATGGCCCGCTACT----TACACa
gi|38 : ---AAT-----ATTCCGTTTAGCTGGTGAATGT-AAAGCCACATGGAGTATG-GG-T-GACCGTCCAAG-GAGCGGACGC-CCTTGCAGT---ACGTCACGACCTC--------AAGATAGAG
gi|4 : tGCAG----ATTCGGAATTTCTCTATACAGC-TT--AGA-ATGTTTGTC-GA-ATATTT----GAT--A-ATCT----AATAC-GATGTAC-----------TTCCG-GTTTTT-TGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCT-GCTTTCAGGA--AACTTTACA-GAAAGCGCGCAATCGCGTTTATCC-TGCAC-ATTTATG---CTG-TAAA-TCATAACA--T------T-AATATT--AGAAT----T--A--TAT-ATTTAAC-T------CATCC-------A----------T------------TT---TGTTATGA--A--GTCTTTATTT--GTTAGA------------GTGAATTGCCG-CG-ATTGAATGAA---GTA-A-GTAT--GG-------------TTTAG--AACATTCAAGG-CATG--GCA----ACGTC--A---T-TT-ATCCCTAACA---AAAT-GGTAC---TCATC---AGAC--AAC---AA----------CGTATCGGTGG-GCGTCTCAGAGCAACAGGGGG-TTT-GA-TTAACCGTCCTAA-GAGCA-----------------------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGT----------AA-----------CCGATTTCACATATTTCGGAC------------GACGCCGGATATGGCACGCCAAGT-TGT-GGCACTCA----TGATCGGTCATTG--------AACAGTTAGGAATCG-GTT-------GC-TGG-GGTTTCAT---TT-AAGGCCACGACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTGCATATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTG-ATGAG-------TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTGTa
gi|5 : ----------------AT--TCGGGGGA----------T-----GGTCTGT----TATGGTTTG-AG-CAG--GG-ATATCTCAAGGC----ATGAAAACACCTCTCGTAGT---TACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGA-GACCACGCATACTTCCTCTTATCCA--TC-AATG-----------TAACCTTTCGTTGCGCCAACAGGACA--ACGCG---A-GGTCCCATGTTCCT--G----------GCTGAAAACCCT--GTT-------CT---------TGA--TT-------------G--A--------TCACCATGCAG-TCCAGATT---------------------A-G-------------------TCCCG-AATCGAAC----AATTGTGAGGTGAGTTGGACAGGAGGGTTAGGAAGCACATCAACGTCCCATA-TAACGTCG-TTCAACTCATGCAGGCACTTATTC-AGGTGT-------GGAAT--G--AT-A--TTCCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGC---------CAA----------------G-AACATC---------GACTGA-AGCCAGGGATGGG--CACATGCTACTGGT----A--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTT----T----GACGATATT-CACGCAAATGCCG---TA-TGATAGG--ACATAA--AAAATCTTAAAAAT-GTATTCAGTAATGATGAAACAtttgac
gi|6 : taacggaaagcgacatATCAGGTCTTGATGAC---ACATTTTTCCTTTTATCCA--TCGAAAG-----------CAAC-TTACGTTTG---AGGAGGATACTAAGCG---A-AGT---ATG---CTAGGTTTGTCGTGAGTT--------TCTGTAATAACAACGACAGTTCTTTGA--TT-------------G--A--------ACAAA-T-TAAGTTTAGATT---------------------TTG-------------------TCGCA-A-TCGAGC----GT--GTGGAACGAGTTGGACAGAAGG-TTAGGAAGTGCGTCAACGT-ACATA-TA--GTCGTCTCAATTCA-ACAGGGCCTTATTCAAGGAGT-------GGAGAT-A--AT-ATTCT-CTCGCAAGGACA--A-----AA-C-CTTGGATGAGG-CAGTGTT--CGAGA-CAA----------------G-AGCAGTG--------GACTAAGAGCCAGGGGAGGGC-CA---GCTA-TGA-TTGGAT--------------T--GTT------GGGTTCCC--TG-TTC----------ATGTTGTTGCATGCAAACACTGT--TG-TGA-AGG---CAAC----AAATCATAAAAAT-GTAATCAatctagacacctaaataatgaacta
gi|7 : AGCGGATGT-CC-----GC---GCGTTACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCGATCCTCCGT----------AA-----------CT----------------GATTCCA--------GATG---------ACACACTAAGC-TGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-GGG-GGTTT--TA--TTGAAAGCCACAACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTGCACATGCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTG-ACGAG-------TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGTT-TGAATACCGAAA-AGC-GAC--A-------------------G----------------AT--TCAAAGGA----------G-----AGTCTGT----TATCGTATT-GG-GAG--GA-AAACCTGAAGGCACAAATAAAAACACCTCTCGTG---GTTATACATGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : GAGC----ATTTGTAGGACGAGCTGGACAGGAGGGTTCGGAAGTGCGTCAGTGTTGCGTAATATTGTCG-CTTAACTCAAGCATGCCGTTATTC-A--AGTACATATAGAAT---G--AT-AT-CT-CTCA-AAGGACAATA-----AAACACATCTAAGGGTTCAATTTTAATAAGAGTAA----------------G-AAAAGA---------AAGAGA-AGCCATGGATGAGCACACAAGGTACTGATT-GGGTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTT----T----AACGCTATT-CACGCAAACACCGCC-TG-CGATAGG--ACAACA--AAAATCATCAAAAT-ATAGTCAGTAATGATTAAATActtgcgtaac
gi|9 : tgttatggtacgtcttctttattggtcatattcaatacaAAAATGAAACTTAA----GTTCAGATTTTGCA-ATATAGC-TTTTAGACACGTG-GACGAA-AT--TT----GATTAT-TTTTTTTAGACA--GATCGAC-----------TTCCGAGCTCTG-TGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCA--GATTTTTCA------------TTCGGGGCACTCC-TTCACAACATGTG---CTAGTAAA-TAATTACAAAT------CGAACAAT--GGAAC----T--G--TGC-A---AAGCTGCACAACATTT-------G----------T------------TT---TCG----A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATTAT---GTC-A-ACAA--GGTTAGGACCATTGCTCT-G--GAAATACGTGGGTATCA-GCA----ACGTT--A---T-GT-ACCTC-AGCA---ATAT-GGTGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
blockSeqs : T C T TAACGTTT C T G . AT A T G TTTA CT ATCTACTT TGCA A C AGC AT G G CTA CCCCCCT CGATTG TAA C T AG T G T CCA AG T CA CA TGGAACTG T TTT TCATCTACACAAGACTTTTTTTTGAAGCTG CT T ACCATAATTGAG T A GTG G G AGGTTAGGACCATTGC A A T T A CG CGCA ATAT G A T AGT G GTA CATAAGAG ATG TTAAATA T G T . GT A A TTGCAGT ACC GCGGCGTC C AACCGATTTCACATATTTCGGAC CCGGATATG A A C CTCA T C ATCAGTA AT A TCATTT ATAGTA T ATTA A C TACATGTAC A A . T CG GTAAG . GCATGCGTAACGAAAAGCGACAA AA AAGCGATAGGG . . C CC . ACAAAT ATAAT A T GT G TATTATGTTGT C GCC G CT . T A GTTTGTCGTGACTTTCTGGTTCAAAACAACATCCCAGTGCTTGATTGGCCACCATACAGTCCAGATTTG A A CCAG G CC A A CGT T A ACATATAGAATGATATCTC GC TCATA A G GTAATAACACTTATAAAATT T C TAGAACAAA G G A GCC C G AT CATGTG G A TAAAT GC TA A GT ATT A T
blockSeqs : . G . TAACTTTT C . T . . T T . . CT AACTACCA AACA . . AA . C . . TGAT AT T C T . G A . . A T TG . AGTT . . TCAGCTTCGCAACATTTCTTTACCATGCGA . . . . . . . . GGGATGC . . T T G C . TGA . . . . . . AAGATCA . CA . G . . AT . . GCATG . GAGAATTC C TACAGATTCAGACGGT . . A C . G . . A . CATTT . T . T T . G . . T TG GTGAT . TCGCATGTAAATGGAAAGCG . G . . . . . AT GTT A . . . . C . G . . . T TTTGTCGTGAGTTTCTGTAATAACAACGACAGTTCTTTGATTGAACAAATTAAGTTTAGATTTTG . A . G CT . A CA C . GGAATATGATATCCC A . . G ATAT . T G T . . . C A . . . . TTGCA C C . . A . T
blockSeqs : . A . TAGCTTTT C . A . . G A . . CT ATGTACTT GGCG . . GC . C . . TAT AT T C T . T A . . A G CA . AG . . CTCATCCATTTTGTTATGAAGTCTTTAT . . . . . . . . ATTGC . . T A A T . A . . . . . . GGGACA . TA . G . . TT . . AG . . C AACCAGCCGGA . . G C . G . . A . CATGT . T . G T . A . . G CA GTGAG . ACTTGCG . G . . . . . GT GTT A . . . . A . G . . . A GCTGAAAACCCTGTTCTTGATTGATCACCATGCAGTCCAGATTAG . . . C CC . A TC C . GGAGATAATATTCTC A . . G CTAC . G . T . . . C A . . . . C C C . . A . T
blockSeqs : . G . CAGCTT T . G . . A T . . CT ATCGACTT AGCT . . GG . T . . AA AC T C T . T A . . A T TG . AG . . TCAGCCACACATTTCTTTTAGATGCGA . . . . . . . . CGG . . T G C T . G . . . . . . CGAAA . TA . T . . T . . GC . . T AACTGATTCCA . . G T . T . . T . CATTT . A . A C . G . . A TG AATAC . TCTTG . G . . . . . AT GT A . . . . C . T . . . A GTTTGCTGTGATTCAGCGTCCCAGTTCTTGATTTG . . . G TG . A TG T . GAAGGAAATAATTG T . . G GTAT . A . T . . . G A . . . . T A C . . A . A
blockSeqs : . T . AATT C . . . . A C . . T AGCT GTT . . AG . C . . AC AT T C T . T A . . A T CG . AG . . TCAGCTATAAATTTTTTCTTGATTTGA . . . . . . . . TGC . . C G G T . C . . . . . . AGACA . TA . G . . G . . AC . . C AACGAC . . A A . A . . A . TATTG . G . G A . C . . C TG TGG . AG . G . . . . . A GT . . . . . C . A . . . A GATTGTCGTGACTCTCTGACTCAAAACTTGATTGG . . . G A . T CG A . GGAATAATAACTT A . . G GCAA . G . C . . . C A . . . . A A C . . A . A
blockSeqs : . A . T . . . . . G T . . C ACTT GG . . AG . C . . AC AT T C A . A . . . A T CG . AC . . GCTGCACAACATTTGTTTTCGAAGCGA . . . . . . . . GGG . . A G C C . A . . . . . . AGAC . T . . . . T . . GC . . A ACGGT . . G C . T . . A . ATTG . A . . T . . . . T CG AT . . T . . . . . . GT . . . . . . . G . . . . GTTTGTCCATCATACAGTCCAGATTTG . . . G . . CG . . GGAATGATATTCC A . . C GTAA . T . T . . . C G . . . . A C C . . G . A
blockSeqs : G . . . . . . . G . . . . . AG . . AG . T . . AG AC T . T . T . . . A A G . AG . . CTTTCCTCTTCGAAAGGAAA . . . . . . . . GGG . . A A G A . A . . . . . . AG . . . . . . . . . . . G T . A . . T . ATGT . T . T . G . . . . . . . . . . . . . . . T CAA . G . T . . . C A . . . . T T C . . A .
blockSeqs : . . . . . . AC C . . . . . . . . . T A . GG . . TTACCTACATGCACAAACA . . . . . . . . TGG . . . T G . . A . . . . . . AG . . . G G . G . . G . TT . T . . . . CAA . G . T . . . T G . . . . T T . . . A .
blockSeqs : . . . . . T . TA . . TCAGCTACACAACATCTC . . . . . . . . C . . . A . . . . . . . . . . . . . . . . . A . . . T T . . . . T C . . . . .
blockSeqs : . . TG . . TCATCTACTTTAAGTGA . . . . . . . . . . . G . . . . T C . . . .
blockSeqs : . A . . TTTCGCG . . . . . . . . . . . . .
blockSeqs : . . . . . .
blockSeqCons : G**** G**** ATCTACTT*********** AG* T** CG****** NGG*************** ** AGACA***** CATTT**** ******* CG GTGAN GCATGCG******************************** G*************** **** *** CG* GGAATGATATCTC************** A* C*
originalCons : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATAN--GG-------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATG---AGGA--AAC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTC--T---TT-AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGAGCGATA-TTCTGAC--GCT---TG-----------CG----------------AT--TCGGGGGA----------G-----GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGT-------GGAG---G--AT-A--CT-CTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
finalCons : AAAA-GAAACGCAAG----TTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TTG----ATTAA-ATTT----GACACTGATCTACTT-----------CCGNGCGCTG-TGAAAA-TGTTCTTCAG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAATCG------AACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-G-ATANGG---------------TCT-G--ATAATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACATGAGACA-----AC---AAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GC-NGG-GGTTCCATTT----AAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGGTGANCGATA-TTCTGACGCATGCG--------------------------------AT--TCGGGGGAG---------------GGTCTGT----TATGGTATG-GG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGGAGTGGAATGATATCTC--------------TCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATTC-ACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG
Alignments
lowQualScore : 11111 333333333 2 11111 1111 3333333333333333333 1111 111111111 11111111 1111111111 88888888888888888888888888888888888888888888888888888888888888888888888 111111111111 333333333333333333 11 111111 11111111 111 1111111111 33333333 99999999999999999999999999999999999999999999999999999999 222222222 1111111 11 111111 222222222 1111111 111111111 7777777777777777777777777777777777777777777 2222222222 111111 33333 22222222222 111 111 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1111 11111111111111 11111 22222222222222222222 222222222 111111111
lowQualScore : 5 00000 5 0 111111111 1 5 0 5 66 11111 2 5 0000 44 0000000000000000000 0000 5 4 0 44 66 4 4 777 444444444 777777 888 1 2 66 1 6 0 4 0 777 44 1 88888888 44 0000000000 3 555 55555555555555555555555555555555555555555555555555555555555555555555555 44 3 555555555555 3 3 777 8 555555555555555555 4 4 1 66 1 5 0 11 8888 777777 4 4 4 777 4 0 777 4 222222 4 4 88888888 5 2 5 5 333 0 5 0 5 8888888888 0 888 66666666 0 1 66666666666666666666666666666666666666666666666666666666 000000000 0 4 1 6 8888 1 4 4444444 1 3 2 11 1 222222 2 9999 1 4 0 0 222222222 4 5 0 8888888 1 111 444444444 5 1111111111111111111111111111111111111111111 0 66 5 1111111111 0 5 66 5 888888 22222 1 5 77 5 77777777777 3 000 3 77 000 5 0 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 5 0 0000 0 2 0 22 5 1 666 5 5 888 5 888 66666666666666 66 00000 4 2 77777777777777777777 4 1 000000000 1 3 0 0 3 555 1 3 44 888888 3 3 444444444 88 0 55 3 55 666 4 1
lowQualScore : . ..... . . ......... . . . . .. ..... . . .... .. ................... .... . . . .. .. . . ... ......... ...... ... . . .. . . . . . ... .. . ........ .. .......... . ... ....................................................................... .. . ............ . . ... . .................. . . . .. . . . .. .... ...... . . . ... . . ... . ...... . . ........ . . . . ... . . . . .......... . ... ........ . . ........................................................ ......... . . . . .... . . ....... . . . .. . ...... . .... . . . . ......... . . . ....... . ... ......... . ........................................... . .. . .......... . . .. . ...... ..... . . .. . ........... . ... . .. ... . . . ............................................................................................................................................ . . .... . . . .. . . ... . . ... . ... .............. .. ..... . . .................... . . ......... . . . . . ... . . .. ...... . . ......... .. . .. . .. ... . .
lowQualScore : 7 99999 0 1 111111111 4 0 0 0 99 88888 2 0 6666 66 0000000000000000000 9999 0 0 1 66 11 7 4 888 444444444 666666 000 1 0 11 9 2 9 0 9 000 88 0 88888888 66 4444444444 3 888 55555555555555555555555555555555555555555555555555555555555555555555555 22 1 888888888888 6 6 000 0 999999999999999999 4 4 1 11 0 7 7 33 5555 444444 0 0 0 000 0 8 888 4 888888 4 4 22222222 7 5 0 7 777 4 7 2 0 6666666666 1 888 22222222 1 4 44444444444444444444444444444444444444444444444444444444 000000000 9 0 4 5 5555 9 4 4444444 0 4 1 77 9 888888 1 4444 7 0 4 4 999999999 0 7 7 6666666 0 555 444444444 7 4444444444444444444444444444444444444444444 2 99 0 9999999999 2 0 99 0 000000 33333 4 7 99 7 11111111111 0 000 0 99 000 7 1 7 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 0 6666 2 5 2 00 7 7 999 3 0 888 0 888 22222222222222 66 00000 0 5 88888888888888888888 0 6 000000000 4 6 2 4 3 888 0 8 22 888888 3 3 888888888 55 1 66 6 00 333 0 0
consensus : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGANCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCGG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-GATA--NGG-------------TCT-G-ATA--ATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACA-T------G-AGA-CAACAAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GCAGGAGTTT-CATTTAAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGG---TGANCGATAT-TCTGAC--G--CNTG-----------CG----------------AT---TCGG--GG-GA----------GGGTCTGTTATGGTATGGG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGG---A-GT---GGA-AT--GATA-TCTCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
Reference ( family-887 ) : AAAA-GAAACGCAA----GTTCGGATTTTGTA-ATATAAC-TTT-AGACACGTG-GAC-AA-AT--TT----GATTAA-ATTT----GACACTGATCTAC-----------TTCCGNGCGCTG-TGAAAA-TGTTCTTCAG-TTAAAAT--TCAGCCGAC-CGT---GACCCC--AC-----TCG--AC--GCT--GCTTGCTTTCAGCA--GATTTTTCAAGAAAGCGTGCATCCGGGGTACTCC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAT------CGAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATGAA---GTC-GATA--NGG-------------TCT-G-ATA--ATGCANGGGCATTC-GCA----ACGTC--A---T-GT-AGCCC-AGCA---ATAT-GGTGT---ACA-T------G-AGA-CAACAAT-----ATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-ATT-GA-T-GACCGTCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCTCGCACCTCCGT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----TGGTCGGCCAGTGTGTCCAAGAACGGTTAGGAATCG-GTT-------GCNGGGGTTC-CATTTAAGGCCACGACGTCCCTA------TGTTGGCCCGCCACT----TACACAGAGGCGACGCCAATGTCGAATGCAGCGGCTGCTTGCACATGCACCTAATCGGTTTCGTTTG---------GCCCATTGGAGACGCGTGTTGTTCACTG-ACGAG-------TCNCGCTTTACAGGTCAGATGGACGACAACGTGTCTATCGACGTCGTGG---TGANCGATAT-TCTGAC--G--CATG-----------CG----------------AT---TCGG--GG-GA----------GGGTCTGTTATGGTATGGG-CAG--GG-ATATCTCAAGGC----GTGAAAACACCTCTCGTGGT-GTTATCCATGGCAATCTTACAGCAGTAACATATCGGGATCAGGTCTTGA-GACCACACGTCCTTCCTCTTATCCA--TC-AACG-----------TAACCTTACGCTGC---AGCAGGACA--ACGCG---A-GGCCCCATGTTGCTAGG----------GTT--------T--GT--------CG---------TGA--TT-------------C--A--------NCGTC-T-CAGNTCTTGATT---------------------T-G-------------------TCCCC-A-TCGAGC----ATTTGTGGGACGAGCTGGACAGGAGGGTTAGGAAGCGCGTCAACGTCNCATA-TAACGTCG-CTCAACTCACGCAGGCCCTTATTC-AGG---A-GT---GGA-AT--GATA-TCTCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGTTAAGGAGAGTAA----------------G-AGCAGT---------GACTGA-AGCCAGGGGTGGGCACACACGCTACTGATTTGGATCAG-GA---AACGGC--GTA------GGGTACCCT-TG-TTT----T----AACGCTATT-CACGCAAACGCCGTC-TG-TGATAGG--ACAACA--AAAATCATCAAAAT-GTATTCAGTAATGNTGAAATA
gi|1 : AAAA-GAAACGCAAACTTGTTTTGAATTTGTA-ATATAACGTCC-AGGCACATG-GAC-AATAT--TTTAAAAATTAA-ATTT----GACATTGAGCTACGGTACATGTACCTCCGTGCACTG-TGAAAA-TGTT--------------------------------GACCCC--AC-----TCG--AC--GC----------------A--GTTTTTGCAAGAGAGCGTGCGTCCGGGGTACTCA-TACACCATATGGG---CTGGTAAA-TCATAACAAATAAGCTACAAA-A-T--GAAAC----A--G--TAC-A------------------T-------A----------T------------TT---C------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGANT
gi|1 : ggaaT--GAAAC----A--G--TAC-A---AA--T------T-TC--------------------------------------------------GC----G-----GT-AGA------------GCAAAATGCCG-CG-ATTGAATAAA---GTC-GATA---GC-------------TCT-G-ATATAATGTAAG-----TC-GTA----AGGTC--A---T-GT-AGTCC-ACTA---ATAT-TGTGT---ACA-T------G-AGA-CAAC--------ATTCNGattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaaGACATTC-GTA----AGGTC--A---T-GT-AGCCC-ACTA---ATAT-TGTGT---ACA-T------G-AGA-CAACA--------TTCAGATTAGTTGG-GGGTGTCAGAGACACGGGGAG-ATTAGG-C-GGCCGCCCCAG-CAGTGGACGC-TC-----GT---GCGTTACG---TC--------AAGATAGAGGCATACGTCTCGTGCACTTCCGT----------AACCGATTTGAGGC-----------------GACGACATGTACGGGGACG---------GCACGCCACGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|1 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcnA-----------C-----------------GGG------------GACG---------GCACGCCAAGT-TATCGGCACTCG----TAGTCGGCCACCGTGTCCAAGAACGG-TAG----CG-GTA-------GCTA-----------TAAAGCCA--------CTA-----------------CAC----------AGAGGCGATGCCAATGTCGAA------GATTGTTTGCACGTGCACCTAATCGGTTTCACTTG---------TCCCAATGGAGACACGTGTTGTTTACTT-ACGAGTCTCACCTCGCGCATTACAGATCAGATGGACGACAACGTGTCTATCGACG--ATAGGTCTGA-CGCTGTATGTAAC--GGAAAAG-----------CG----------------ACAGATCGGTAGGCGA----------AGGCATGTTA----------CAG--GGCATATTTTAAGGC----GTGAAAACACCTCTCGTGG--G-TATCCATGGCAATCTTACAGCAGTAACATATCGGGACCAGGTGTTGA-GACCACAGGTCCTTCCTCTTATCCA--TC-AACG-----------TAACTTTACGTCGC---A-TAGGAGA--ACGCGATCA-GGCCCCGTGTTGGAAGG----------CTT--------T--GT--------TG---------TGACTTT-------------CTGACTGAAAACACGTC-T-CAGATAATTATT---------------------T-GGCCTCCACGCAGTCCAGATCCCCC-C-TCGACC----ATTTGTTGGACGAACTGAACAAGGGGTTTA-GAAGTGCGTCAACGTCACATA-TAACGT------------CACAGGCCCGTATTC-TGG---A-GT---GGA-GT----------------AG--CAATA-----AA-TACCTCGATGGGGTCAATGTTAAGGAGAGTCA----------------G-AGCAGT---------GTCTGA-AGCCAGGGGTGGGTACACACGCTACTGATTGGGATCAG-GA---AACGGC--GTA------TGGTACCCT-TG-TTT----T----AACGCTATT--GTGCAAACGCCATT-TT-TGATAGA--ACAATA--AAAAGCATCGAAAT-GTATnttgcacttccgtaaccgatttgagacaacgacatgtacggggacggcacgccaagttatcggcactcgtagtcggccaccgtgtccaagaacggtagcggtagctataaagccactacacagaggcgatgccaatgtcgaagattgtttgcacgtgcacctaatcggtttcacttgtcccaatggagacacgtgttgtttacttacgagtctcacctcgcgcattacagatcagatggacgacaacgtgtctatcgacgataggtctgacgctgtatgtaacggaaaagcgacagatcggtaggcgaaggcatgttacagggcatattttaaggcgtgaaaacacctctcgtgggtatccatggcaatcttacagcagtaacatatcgggaccaggtgttgagaccacaggtccttcctcttatccatcaacgtaactttacgtcgcataggagaacgcgatcaggccccgtgttggaaggctttgttgtgactttctgactgaaaacacgtctcagataattatttggcctccacgcagtccagatcccccctcgaccatttgttggacgaactgaacaaggggtttagaagtgcgtcaacgtcacatataacgtcacaggcccgtattctggagtggagtagcaataaatacctcgatggggtcaatgttaaggagagtcagagcagtgtctgaagccaggggtgggtacacacgctactgattgggatcaggaaacggcgtatggtacccttgttttaacgctattgtgcaaacgccatttttgatagaacaataaaaagcatcgaaatgtat
gi|10 : ggaaaaaagaaacgcaaacttgttttgaatttgtaatataacgtccaggcacatggacaatattttaaaaattaaatttgacattgagctacggtacatgtacctccgtgcactgtgaaaatgttgaccccactcgacgcagtttttgcaagagagcgtgcgtccggggtactcatacaccatatgggctggtaaatcataacaaataagctacaaaatgaaacagtacatatttcgcggtagagcaaaatgccgcgattgantattgaacagtaaaaataagctacaaaatgaaacagtacaaatttcgcggtagagcaaaatgccgcgattgaataaagtcgatagctctgatataatgtaagtcgtaaggtcatgtagtccactaatattgtgtacatgagacaacattcngacattcgtaaggtcatgtagcccactaatattgtgtacatgagacaacattcagattagttgggggtgtcagagacacggggagattaggcggccgccccagcagtggacgctcgtgcgttacgtcaagatagaggcatacgtctcgtgcacttccgtaaccgatttgaggcgacgacatgtacggggacggcacgccacgttatcggcactcgtagtcggccaccgtgtcnttgcacttccgtaaccgatttgagacaacgacatgtATA--AATGTCA-TTCAACTCATGCAGTCCCTCATTC-ATG---A-GT---GGA-AT--AATA-ACTTTCA-AAGGACAATA-----AC-CACCTTGATGGGGTCAATGTTAAGGAGAATAT----------------G-AGCACTTAGAACAAAGGCGGA-AACTAGGGGTGGGCACTCATGCTACTGATTTGGATCAG-GA---AACAGC--GTA------GCATACTCT-TA-ATA----C----AACACTATT-CACGCTAACACCATTATG-TGATAGG--ACAAC---AAAATCATTGAAAT-GTATTCAGTAAAGATGAAATA
gi|11 : gagtgttataacaACACCAAGTACAT-AGCATTGA----TG-------AGTGTGTCGGAGTACTGTTACGAGTCG-GTT-------ACAGGAGGTT-CATTGAAAGTGATGACGGACCTC------TGTTGGCTCACTACT----AACACAGAGGCGACACCAATATCAAATGCAGCGGATGCTTGCACATGCACCTAATTTATTTACTTTG---------GCACATTGCAGACACTTGTTGTTCAGTGAACTAG-------TCTCGATTTACAAATCAGGTGAACAACAACGGGTTTATCGACGGCGTGG---TAAGCAATAT-TCTGAT--T--CTTG------------------------------T---TCAA--CG-GAAAGCGATAGGGGGTCAGTTATGTTCTAGA-CAG--GG-AT------AGG-------------ACCTCTCGT-GT--TTATCGATGACAATCTTGCAGCAGTGACTTATCattgagaaagccaaacagtgaacaaatcatcaatgaatcatgtgaaatcataactatcggaaataaattgcaattcttttttccgctagtat
gi|12 : TAAAGACGTACGTCTC-CG-ATTTCAG------------A-----------C-----------------GGT------------GACG---------GCAC---AAGT-TGTCCACACCCA----TGGTCGGCCAGTATGCCTAAGAACGGTTAGGAATCGCGTTATCAGTAGCAGGAGTTTTCATTTTAGGCCACAACGTCCTTA------CGTTGGTATGTCGCT----TGTATAGAG---------------AATGCAGTGGCTGATTGCACGTG-----------TTTCGTTTC---------GCCCATTGGTGAGGCGTGTTGTTCACCG-AC-AG-------TCTCACTTTACAGGCCAGATGGACGACGGCGTGTCTATCGGCGTTGTGA---T----GATAT-TTTGAC--G--CTTG-----------C
gi|13 : AA-GAAATGCAG----CTTCGGATTTCGTA-A---AAT-T----GACG---------AA-AC--TT----AATTAA-ATCT----AA-ACTG---------------------GGG---------AAA-TGCTCTTCAA-TTAAAAT--TTAGCGGAC-CGT---GACTCT--AA-----TCG--AT--GCT--GCTTGCTTTCAGCA--GATTTTTCAGGAAAGCAAGCAAGCAGGGTATTTC-TGCATCATATATG---CTGATAA--TCATTACAACT-------GAACATT--GGAAC----A--G--TAC-A---AA--T------CATCT-------A----------CACAAGACTTTTTTT---TG-----A--A--GC----TGTT--GT-AGA------------GAGACATGCAC-CG-ATTGAATGTA---GTC-GA-A--CGG-------------ata
gi|14 : cA-TGTTCTTCGC-TTAAA-T--TCAGC------GT---GATCC---AC-----TCGCGATTGGCT--GCTTGCTTTCAAAAAGAATTTTGCAAGAAAGCGTGCATCCGGAGTATTCCTTGCACCATAT-TGCCACTTGTAAAGTCAGTGGAAAT------CA---ATTCAGCTAC----A------AC-A---AA--C------TTTCC-------T----------C------------TT---CGAA---A--G--GA----AATT--GT-AGA------------GCGAAATGAAGTCGAAATAAAAGAG---AAC-TATT--TGC-------------TCT-G-CTA--ATGCATGGGCATTT-GCA----ACGTC--G---TGGT-AGCCC-AGAG---ATATGGGTGTGTAACA-T------GAAGATCAACAAT-----gaaaggaccatt
gi|15 : CTGA-AGTCTTGAGTACGCACACTCAGTACTAATTTGGACCAG-GA---AACGAC--GTA------GGATA-CCT-TG-TTTTAAAT----AACGCTATT-CAGGCAAACGCCGTC-TG-TGA---G--ACAACA--AGAtctc
gi|16 : GGTGG-CACACACGCTACTGATTTGGATCAG-AA---GACGAC--GTACATGTGGGGTACTCT-TG-ATT----T----AACGCTATT-AACGTAAACACCGTC-TG-TGATAGG--GTAATA--TATATAACCAAAAC-ATATCCAATAATGTTGAAATAcaacaacaacaacaacaagaaaataaataaataaaataaaattgtacagtatttattaatgatgaaataattgagaaactcaatgagcaaatcatcaatgagcgattagaataatgaacattcaataataaactagcggatttgcttttgggttttttcccgctagtatata
gi|17 : tctgatcagannnnnnnnnnnnnnnnnnnnnnnnnat-AGGGACAATG-----CA-CAACTTGATTTGGTCAATATTAAGGAGACTAC----------------G-GGCATT---------GACTAA-AGTGCGGTATTGGCACACACATTGCTTTTTT---------A---AA-G---------------------T-TG-TTT----TTGCAAAGGC-ATT--ATGCAA---------TG--AATGGG--ATATCA--AAAATTATCAAAAT-ATGTTTAGTAACATTGAAATAgtcgagaaatccatgataagcttgtcatgaatcttgcaaagtaataactatcgagaataaacttgcatttcttatttccgctagtatatg
gi|18 : ATAAAT-------AAACATT--GGA-C----A--G--TACTA---AA--T------TACCT-------A----------C------------ATGCAC------A--A--AC-----ATTCTGT-CGAACCATAATTGAGGCGAGATCCCG-CG-ATTGAATGAAGTGGTCGGGTA--GGGATGC---------TCT-GAATA--ATGCCTGGAC--TCGGTA----ACGTC--C---C-TTAAGCCC-AGCAAGTATGT-GGTGT---ACA-T------T-AGA-C-ACAAT------TTCC-TTTAGTTGG-GCGCTTCAGAACCTT--GGAG-ATatcgagaaacccaaacactgatcttatcagacaatcgaaaatggacttgcatttctttttactgctagcat
gi|19 : CACACACGCTACTGATTT-GATCAG-AAGCCAAGTACATGTG------GGGTACTCTGCA-TTT----A----AACGCTATC-AACGTAAACACC-TC-TGATGATAGGGTACTATATTAAA-----CAAAACAATATCCA-TAATGTTGAAATAagtgaactgcaaaagtgatgtccg
gi|2 : AAAG-GAAACGCAA----GTTCGTATTTTGTA-ATATAACGTTT-AGACACGTG-GAC-AA-AT--TA----TATTAA-ATTT----GACACTGATCTAC-----------TTCTGTGCATTG-TGAAAA-TGTTCTTTGG-TTAAAAT--CCAGTCGAC-CGT---GACCCC--AC-----TCG--AT--GCT--GCTTCCTTTTTGCA--GATTTTTCAAGAAAGCATGCATTCAGGATACTCC-AGCAGCTTATGTT---TTGGTAAA-TCATGATAAAT------TGAACATA--TGAAT----A--C--TAC-A---AA--T------CATCT-------A----------C------------TT---T------A--A--GT----GATT--AG-AGA------------GCGAAATACCG-AG-ATTGAATGAA---GTC-GATA--GGG-------------TCT-G-ATA--ATACAAGGCCCTTT-GCA----ACGTC--A---T-GT-AGCCA-AGCA---ATTT-GGTGT---ACA-T------G-CGA-AAACAAT-----ATCCCGTTTAATTGG-GCGTCTCAGAGCCACAGCAAG-ATT-GA-T-GACCGTCCTAG-GAG-AGAGGC-CT-----AG---GCGTTATG---TC--------AAGATAGGGGCATATGCCTCTCGCATCTGCAT----------AA-----------C-----------------GAC------------GACG---------GCACGCCAAGT-TGTCGGCACTCA----CAGTCGGCCAGTGTGTTCAAGATCGGTTAAGAATCG-GTT-------GTTGGAGTT----TTT--GACCAAAACGTTCCTA------TGTTGACCCGCCACT----TACACAGAGACGACGCCAATTTCGAGTTCAGTGGCTGCTTG--CATGCATCTAATTGGTGGCGTTTG---------GCCCATTGGAGACACGTGTTGTTCACAG-ACGCT-------TCGCGCTATACAGGTCAGATGGACAAAAACGTGTCTGTCGACGTCATGG---TGATTGATAT-TCTGAC--A--CTTG-----------CG----------------AT---TCGG--GG-AA----------GAGCTTGTTATGGTATGGG-CAG--AG-ATGTTTCAAGGC----ATGGAAACACCTCTCGTGATAATTATCTATGGCAATCTTACATCAGTAATATATCGGG-CCAGGTCTTGA-GATCGCAAGTCCTTCCTCGTATCCC--TC-AACATATTATGTTGTTAACC-TACGCTGC---AGCAAGACA--ACGCG---A-GGTCCCGTGTTGCTACA----------GTT--------T--GC--------TG---------TGA--TT-------------C--A--------GCGTC-C-CAGTTCTTGATT---------------------T-G-------------------TTCCC-A-TCCAGC----ATTTGTGGGAAGATCTGGACAGAAGGGATAAGAAACCAGTCAACGTCCCATA-TAACGTTC-CTCAATTAACGCAGGCCCTTATTC-AGG---A-TTGAAGGA-A----ATA-ATTGTCA-ACGGACAATA-----AT-CACCTTGATGGAGTCAATGCTGAGGAGAGTAT----------------G-AATAGT---------GACTGA-AACCAGGAGTAGGAAAACACACCACTGATTTGTATTAG-GA---AACGAC--GTA------GGATACCCT-TG-TTT----A----AACGCTATT-CACACAAACGCCGTC-TG-TGATAGA--ACAACA--AAAATCACCAAAAT-GTATTCAGTAATGATGAAATAtccagaagaaattccatgataaagcttgtcatgaaatcttgctcaaaaaagtaactaactagcgagaataaacttgcatttcttatttttccgctagtat
gi|20 : ----------------AT---TTGG--AG-GA----------GGGTCTGTTATGGTAAGTG-CAT--GG-ATATCTCAAA------------------CTTGTGGT--TT-TCCATGGCAATCTTACAGCAGGAAAATAGAGGGATCAGGTCTTGA-GACCAAACGTCTTTTCTCTTATCCA--GC-AGCG-----------TAACCTTAAGTTAC---AGCAGGACA--ACGCG---G-GGCCACATGTTGCTTGG----------GAT--------T--GT--------CG---------TGA--CT-------------C--T--------CTGAC-T-CAAAACTTGATT---------------------G-G-------------------CCACC-A-
gi|21 : ------A--A--GC----GATT--GT-AGA------------GCAAAATCCCG-TG-ATTGATAGGG---GTTGGACAATTGC-------------TCT-T-ATA--ATGCAGGGGCATTT-GCA----ACGTC--ATATT-GT-AACCT-AGCA---ATAT-AA------ACA-T------G-AG-------------------GCTTAGTTGC-ACATCTCATAGCCACA------ATT-AA-G-GA--GACTTGGAAAGCCAACGCATT-----GCATGGCG--ACG---TC--------AAAGTAGACGCACACGTCTTTTGCACTTCCAT----------AA-----------C-----------------caca
gi|22 : g-AGG---A-GT---GGA-ATATGATA-TCCCTCT-AAGGACAATATCATAAA-CACCTTGATGGGGTCA--GTTAA-GAGA-------------------------------------GAC------------GT--GCACACACTCTACTGATTTGGGTCAG-GA---AACTGC--GGA------GTGTACcaattt
gi|23 : CAATA-----AA-CACCTTGATG---------TTAAGGAGAGTAATAACACTTATAAAATTGTAGCAAT---------GACCGA-AGCTAGGTATGGACACACACTCTATTGATGTGGATCAGAGA---ATCGAC--GTA------GGTTATC----A-TTT----T----AACGTCCTT-TATACAGGCGCCGTC-TG-TGATAGG--ACAACG--CATATCATAAAAAT-GTATTaaaaaccaattgatgaaataatcggaacattgaactaatcatcaatgaatcatggaaaataaaaccgttatgtatataaaaaaaaaaaaata
gi|24 : C-TTCACCATATATG---CTGATAAA-TCATTACAAAT------CAAACATT--GGAGC----A--G--TAC-A---AA--T------CAGCT-------A----------C------------AC---A------AC-A--TC----TCTT--TT-----------------CGAA-----G-TA-ATTG--TGAA---TTC-GATA--GGG-------------T--------------AGGGCCATT--GC--------TCTGA---T-GT-AGCCC-AACA---ATAT-GGTGT---ACA-TGCATAAG-AGA-CATGAAT-----ATTCC
gi|25 : AAAA-TGTTTTTTAG-TTAAAAT--TCAGCCGAC-CGT---GACTCC--AG-----TTG--AC--GCT--GCTTGCTTTCAGC--------------AAAGTATGCATCCAGGGTACTCC-TGCACC--ATGCT---CTGGTAA---------------------AACATT--GAAAT----A--GTTTGC-A---AA--T------CAGCC-------A----------CACATTTCT----TT---T------A--GATGC----GATT--AT-AGA------------GCGAAATtctttgaatggac
gi|26 : tAAA-GAAATGCAA----ATTTGGATTTTGTA-AGAT--------------GTG-GGTGAA-A---------GATAAA-ATCT----GACACTGAGCT---------------CCAAACACTG-TAAAAC-TATTCTACAG-TTAGAAT--TCAGCTGAC-CAT---GATCCC--AC-----ATG--AT--GC------TGCTTCCAGCA--GATTTTTTAAGa
gi|27 : atatactagcaggGT-T-TTGGTACTCA----TGGTCGACCAGTGTGTCCAAGAACTCTTAGAAATCG-GTT-------ACATGAGATT-CATGTAAGGCCACGACGTCTCTA------TGATGGCCCGCTACT----TACAC
gi|28 : tcaccaatttcagacgtcgtcggagaagtaacataaatAGAACCACAGGAAG-ATT-GAGT-GACCATCCCAG-GAGCGGACGC-CC-----GC---GCGTTACG---TC--------------GTGACGTAAGTCTCTCGCACCTCCGTTACAGATTCAGA-----------C-----------------GGT------------GACG---------GCACGCCAAGT-TATAGGTATTC
gi|29 : AAAGCATGCATACGGTGTACCAC-TGCACCATATGTG---CTGGTAAA-TCATTACAAAC------TGAACATC--AGAAT----G--G--TAC-A---AA--T------CAGCT-------ATAAATTTTTTC------------TT---G------A--T--TT----GATT--GA-AGA------------GCAAAATGCCtgtactctgataggacaa
gi|3 : AAGA-GAAACGCAA----GTTCGGATTTTTTA-ATA------------CACGTT-GATTAA-AT--TT----AATTAA-ATTT----GACGCTGAACTAC-----------CACCGGGCGCAG-TGAAAA-A--TCATCAG-TTAAAAG--TCTGCCGTT-CGT---GACCCC--CCCCCCTTCG--AT--GCT--GCTAGCTTTCAGCA--TACTTTTCAAGAAAGCGTGCATCCGGGGTGCTCC-TGCACCCTATGTG---CTGGTAGA-TCATTACATGT------CGAGCATT--GGAACTGGAACTG--TAC-A---AA--T------CAGCTTCGCAACATTT-------C------------TT---T------ACCAT-GC----GATT--GT-AGA------------ACAAAATGCCG-CG-ATTGCATGAT---GTA-GATT--C---------------TCC-G-ACA--ATGCAGGAGCATTC-GCACGCAACGTC--A---T--T-AACCC-AGCA---ATAT-GG-GT---AAAAG------G-GGA-CAACAATTAAATATTCCGTTTAGTTGG-GCGTCTCAGAGCCACAGGGAG-GTT-GAAT-GACTGCCCCAG-GAGCGAACAC-CC-----AC---GCGTTACG---TCGCGGCGTCAAAATAGAGGCATACGTCTCTCGTGTCTCCGT----------AA-----------CCAGCCG-----------GA-------------GACG---------GCACACCAGGC-TGTCGGTCCTCA----TTTTCGGCCAGTGTGTCCAAAAACAATAAGGAATCG-GTT-------GCAGGAGTTC-CATTTAAGGCCACGGCGTCCCTA------TGGTGGCCCACCACTATTATACACAGAGGCGACGTCAATGTCGAATGCAGCGGCTGTTTGCACATGCATCAAATCGGTTTCGTTTGTACATGTACATTCATTTGA----CGTCTTGTTCACTG-ATGAG-------TCACGGTTTGCACGTCAGATGGACGACAACGTGTCTATCGACCTTGTGG---TGAGCGATAT-TTTGAC--G--CATG-----------CGTAACGAAAAGCGACAAAT---TC-G--GG-GA----------GGGTTTGTTATGGTATGGG-CAG--GG-ATATCTCGAGGC----GTGAAAACACCTCTCGTG---GTTATCCATGACAGTCTTACGGCAGTAACATATCGGGATCAGGTCTTGA-AATCACGCGTACTTCCTCTTAACCA--TC-AACG-----------TAACATTAAGCTGC---AGCAGGACA--ACGCG---ATGCCCCCATGTTATTAGG----------GTT--------T--GT--------CG---------TGA--CTTTCTGGTTCAAAAC--A--------ACATC-C-CAGTGCTTGATTGGCCACCATACAGTCCAGATTT-G-------------------TCCCTAA-TCGAGC----ACTTGTGAGATGAGCTGAACAGGAAGGTTAGAAAGCGCATCAACGTCTTATA-TAACATTG-CTCAACTCACGAAGGACCTTATTC-AGG---A-GT--------------------------GGATAATA-----AA-CACCTTGATGGCGTCCATGTTAAGTAGAGCAA----------------G-AGCAGT---------GACTGA-AGCCAGGAGTGctaaatggaaaag
gi|30 : cggaaGC--GGA------CGGTACCCT-CGATTT----T----AACACTATT-TAGGCAAACACTGTa
gi|31 : tGTATCTATCAACGTTGTG----TGGC-----T-TCTTACTCG--CATGTAAATGGAAAGCG----------------ACAA-TTGG--GG-G-----------GGGTCTGAAATGATATGGGCCAGCCAG-ATAACTCA--GC----A-GAAAACATCTTTTGTattcaataatgatgtaataatcgagaaacccaaacaataaactaatccttcacgaaacatgaaaaataataaccatcgaaaataaac
gi|32 : agttagatgaCAGGATCAGGTCTTGA-GACCACACGTCC--------ATCAAGTTC-AACG-----------TAACCTTACACTGC---ATCGGGACA--ATGCA---A-GTCTCAATGCCGATAGG----------GTT--------T---T--------AA---------TGA--TT-------------
gi|33 : ----------GTT--------T--GT--------C------------------------------C--A--------TCATA---CAG-TCCAGATT---------------------T-G-------------------TCCTC-AATCGAGC----ATTTGTGGGACGAGCTGGACAGGA-GCTTAGGAAGttcttgctcaaaacaacatct
gi|34 : ggtttgtcatgactttctagctgaagaaaatgtcccagttcttAAAA-GAAATGCAA----TTTCTGATTTTGTA-ATATAACTTTT-AGACTCGTG-GATAAA-AT--TT----AATCAAGGTTT----GTCA-TG----AC-----------TTTCTA--GCTGAAGAAAA-TGT
gi|36 : tactagtggaaa-------------C--A--------ACGTT-T--AGGTATTGATT---------------------T-G-------------------CCGAC-A-TTCAGTCCAGATTT-TGGGAAATGCTGAGCAGGAGGGTTGATAAGCACGTAAAC
gi|37 : ttgttttgacactccagctctaaaTTGGTACTCA----TAGTCGGCCAGTGTGTCCAAGAACTCTTAGAAATCG--TT-------ACATGAGATC-CATGTAAGGCCATGACGTCTCTA------TGATGGCCCGCTACT----TACACa
gi|38 : AAT-----ATTCCGTTTAGCTGGTGAATGT-AAAGCCACATGGAGTATG-GG-T-GACCGTCCAAG-GAGCGGACGC-CCTTGCAGT---ACGTCACGACCTC--------AAGATAGAG
gi|4 : tGCAG----ATTCGGAATTTCTCTATACAGC-TT--AGA-ATGTTTGTC-GA-ATATTT----GAT--A-ATCT----AATAC-GATGTAC-----------TTCCG-GTTTTT-TGAAAACTGTTCTTCAGCTTAAAATATTTAGCCGACGCGTCTAGACTCCTGAT-----TCG---C--ACT--GCT-GCTTTCAGGA--AACTTTACA-GAAAGCGCGCAATCGCGTTTATCC-TGCAC-ATTTATG---CTG-TAAA-TCATAACA--T------T-AATATT--AGAAT----T--A--TAT-ATTTAAC-T------CATCC-------A----------T------------TT---TGTTATGA--A--GTCTTTATTT--GTTAGA------------GTGAATTGCCG-CG-ATTGAATGAA---GTA-AGTA--TGG-------------TTTAG-AAC--ATTCAAGG-CATG--GCA----ACGTC--A---T-TT-ATCCCTAACA---AAAT-GGTAC---TCA-T------C-AGA-CAACAA----------CGTATCGGTGG-GCGTCTCAGAGCAACAGGGGG-TTT-GA-TTAACCGTCCTAA-GAGCA-----------------------ATG---TG--------ACGATGAACGCATATGTGTCTCGCTCCTTTGT----------AA-----------CCGATTTCACATATTTCGGAC------------GACGCCGGATATGGCACGCCAAGT-TGT-GGCACTCA----TGATCGGTCATTG--------AACAGTTAGGAATCG-GTT-------GCTGGGGTTT-CATTTAAGGCCACGACGTTCCTT------TGTTAATCAACTACT----TATATAGAGGCGACGCGAATATCAAATGCAGAAACTGTTTGCATATGCACCTAATTGGTTTCGTTTG---------GCCCATTGGAAATGCATACTGTTCACTG-ATGAG-------TCCTGCTTAACAGGTTAGATGGACAATAACGTGTATATCTCCGTCGTTG---Ta
gi|5 : ----------------AT---TCGG--GG-GA----------TGGTCTGTTATGGTTTGAG-CAG--GG-ATATCTCAAGGC----ATGAAAACACCTCTCGTAGT---TACCCACGGCAATCTTACAGCAGTAACAT-----------GCCTTGA-GACCACGCATACTTCCTCTTATCCA--TC-AATG-----------TAACCTTTCGTTGCGCCAACAGGACA--ACGCG---A-GGTCCCATGTTCCT--G----------GCTGAAAACCCT--GTT-------CT---------TGA--TT-------------G--A--------TCACCATGCAG-TCCAGATT---------------------A-G-------------------TCCCG-AATCGAAC----AATTGTGAGGTGAGTTGGACAGGAGGGTTAGGAAGCACATCAACGTCCCATA-TAACGTCG-TTCAACTCATGCAGGCACTTATTC-AGG---T-GT---GGA-AT--GATA-TTCCTCA-AAGGACAATA-----AA-CACCTTGATGGGGTCAATGC---------CAA----------------G-AACATC---------GACTGA-AGCCAGGGATGGG--CACATGCTACTGGT----A--AA-GA---AATGTG--GCT------GGGTTCCCT-TC-TTT----T----GACGATATT-CACGCAAATGCCG---TA-TGATAGG--ACATAA--AAAATCTTAAAAAT-GTATTCAGTAATGATGAAACAtttgac
gi|6 : taacggaaagcgacatATCAGGTCTTGATGAC---ACATTTTTCCTTTTATCCA--TCGAAAG-----------CAAC-TTACGTTTG---AGGAGGATACTAAGCG---A-AGT---ATG---CTAGGTTTGTCGTGAGTT--------TCTGTAATAACAACGACAGTTCTTTGA--TT-------------G--A--------ACAAA-T-TAAGTTTAGATT---------------------TTG-------------------TCGCA-A-TCGAGC----GT--GTGGAACGAGTTGGACAGAAGG-TTAGGAAGTGCGTCAACGT-ACATA-TA--GTCGTCTCAATTCA-ACAGGGCCTTATTCAAGG---A-GT---GGAGAT--AATATTCTCTCGCAAGGACA--A-----AA-C-CTTGGATGAGG-CAGTGTT--CGAGA-CAA----------------G-AGCAGTG--------GACTAAGAGCCAGGGGAGGGC-CA---GCTA-TGA-TTGGAT--------------T--GTT------GGGTTCCC--TG-TTC----------ATGTTGTTGCATGCAAACACTGT--TG-TGA-AGG---CAAC----AAATCATAAAAAT-GTAATCAatctagacacctaaataatgaacta
gi|7 : AGCGGATGT-CC-----GC---GCGTTACG---TCGAGAATTCAAGATAGAGGCATACGCCCCTCGATCCTCCGT----------AA-----------CT----------------GATTCCA--------GATG---------ACACACTAAGC-TGTGGGCACTCACTCATGGTCGGCCAATGTGTCCAAGAACGGTTAGGAATCG-GTT-------GCGGGGGTTT-TATTGAAAGCCACAACGTCTCTAATAGTATGTTGGTCCGCCACT----TACACAGAAGCGACGTCAATGTCGAATGCAGTGGCTGCTTGCACATGCACTTAATCGGTTTTGTTCA---------GCCCATTGGAGACCCATATTGTTCTCTG-ACGAG-------TCTCGCTTCACAGATCAGATGGAGGACAACATGTTTATCGACGTT-TGA---ATACCGAAAA-GC-GAC--A------------------G----------------AT---TCAA--AG-GA----------GAGTCTGTTATCGTATTGG-GAG--GA-AAACCTGAAGGCACAAATAAAAACACCTCTCGTG---GTTATACATGttttcctgtgtgaagtaaacgagataatccaatcactaatcataaagaattacataaaaaatactatcaa
gi|8 : GAGC----ATTTGTAGGACGAGCTGGACAGGAGGGTTCGGAAGTGCGTCAGTGTTGCGTAATATTGTCG-CTTAACTCAAGCATGCCGTTATTC-AAGTACATAT---AGA-AT--GATA-TCTCTCA-AAGGACAATA-----AAACACATCTAAGGGTTCAATTTTAATAAGAGTAA----------------G-AAAAGA---------AAGAGA-AGCCATGGATGAGCACACAAGGTACTGATT-GGGTCAG-AA---AGTGGC--GCA------GATTACTCT-AG-TTT----T----AACGCTATT-CACGCAAACACCGCC-TG-CGATAGG--ACAACA--AAAATCATCAAAAT-ATAGTCAGTAATGATTAAATActtgcgtaac
gi|9 : tgttatggtacgtcttctttattggtcatattcaatacaAAAATGAAACTTAA----GTTCAGATTTTGCA-ATATAGC-TTTTAGACACGTG-GACGAA-AT--TT----GATTAT-TTTTTTTAGACA--GATCGAC-----------TTCCGAGCTCTG-TGAAGA---------------AAAT--TCAGCTGAT-CGT---GTCCCCT-AT-----TGG--AC--GCTAAG-TTGCTTTCAGCA--GATTTTTCA------------TTCGGGGCACTCC-TTCACAACATGTG---CTAGTAAA-TAATTACAAAT------CGAACAAT--GGAAC----T--G--TGC-A---AAGCTGCACAACATTT-------G----------T------------TT---TCG----A--A--GC----GATT--GT-AGA------------GCGAAATGCCG-CG-ATTGAATTAT---GTC-AACA--AGGTTAGGACCATTGCTCT-G-GAA--ATACGTGGGTATCA-GCA----ACGTT--A---T-GT-ACCTC-AGCA---ATAT-GGTGaccaagaaatccaaacaatgaaccaatcaccattgaatcatataaaatagatatc
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|35 ): AAATGATGAGATACTTGAGAAACCCAAACAATGAACGAATTATCAATGAATCATGTTAAATAATAAAGATAGAAAATTAACTTGCGTTTCTTTTTTCCGCTTGTATAC
Unaligned ( gi|39 ): AGTAATGATGAAATAGTCGAAAAACTTAATCAATGAACTAATCGAAAATGAATCATGTAAAAAAACTATCGAAGACAAACTTACGTTATTTTTCCCCGC
Unaligned ( gi|40 ): CCAAACAATGAACTAATCATTAATGAAGCATGTTACGCGTAAAACAATAAGTTCTATCGAAAATAAACTTTCTTTTTTCCCCGCTAGTAT
Unaligned ( gi|41 ): AATCGAGAAACTCAAACCGTGAACTAATCATCAATGTATCCGGTAAAGTGATAACTACCGAAAATAAACTTGCG