lowQualScore : 4
lowQualScore : 0
lowQualScore : .
lowQualScore : 0
consensus : NTCATACCGCTTTAAAGGGGCATGGACACGTTTTGA
Reference ( gi|8 ) : ATCA-ACCGCTTTAAAGGGGCATGGACACGTTTTGA
gi|4 : TCATATCGCGTTAAAGGGGCATGGACACGTTCTGA
gi|7 : gtagCCTCCTTAAAGGGGCATGGACACGTTTTGA
gi|14 : catatacCGCTTTAAAGGGACATGGACACGTTTTGA
gi|12 : tGCCTTAAAGGGGCATGGACACGTTTCGA
gi|6 : ctctaGTTTTAAAGGGACATGGACACGTTTTGAg
gi|5 : tattaccatGCTTTAAAGGGACAGGGACACGTTTTGA
gi|1 : tgtgtcatGCATTAAAGGGACATGGACACATTTTGAg
gi|17 : tgtatgtacatgtaccatCTTTAAAGGGGCATGGACACGTTTTGAa
gi|11 : CTTTAAAGGGGCATGGACACGTTTTGA
gi|15 : ttatcgaCTTTAAAGGGGTATGGACACGTTTTGA
gi|13 : cCTTTAAAGGGACATGGACACGTTTTGA
gi|2 : tCTTTAAAGGGACATGGACAAGTTTTGAgc
gi|3 : agtccgacgtaagttTTTAAAGGGGCATGGACACGTTTTGAgct
gi|16 : tgatctgaacagTTAAAGGGGCATGGACACGTTCTGAg
gi|9 : acTTAAAGGGGCATGGACACGTTCTGA
gi|10 : gtatctccacTTAAAGGGACATGGACACGTTTTGA
Alignments
lowQualScore : 11
lowQualScore : 22 6
lowQualScore : .. .
lowQualScore : 22 2
consensus : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
Reference ( family-875 ) : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|1 : TACCATG-CATTAAAGGGACATGGACACATTTTGA
gi|10 : tgtatgtacatgTTAAAGGGACATGGACACGTTTTGAa
gi|11 : cgtccatgcTATC--GACTTTAAAGGGGCATGGACACGTTTTGA
gi|12 : t--G-CCTTAAAGGGGCATGGACACGTTTCGA
gi|13 : ctcta-CTTTAAAGGGACATGGACACGTTTTGAg
gi|14 : tC--G-CTTTAAAGGGACATGGACACGTTTTGAgc
gi|15 : t-CTTTAAAGGGGTATGGACACGTTTTGA
gi|16 : cTTAAAGGGGCATGGACACGTTCTGA
gi|17 : ac-CTTTAAAGGGGCATGGACACGTTTTGA
gi|2 : -CTTTAAAGGGACATGGACAAGTTTTGA
gi|3 : agtccgacgtaagttTTTAAAGGGGCATGGACACGTTTTGAgct
gi|4 : tgatctgaacagTCATATC--G-CGTTAAAGGGGCATGGACACGTTCTGAg
gi|5 : gtagTCAT-----G-CTTTAAAGGGACAGGGACACGTTTTGA
gi|6 : tgtgTACCATG-TTTTAAAGGGACATGGACACGTTTTGAg
gi|7 : tatATACC--CTCCTTAAAGGGGCATGGACACGTTTTGA
gi|8 : catTCA-ACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|9 : aTTAAAGGGGCATGGACACGTTCTGA
Alignments
lowQualScore : 11
lowQualScore : 22 6
lowQualScore : .. .
lowQualScore : 22 2
consensus : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
Reference ( family-875 ) : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|1 : TACCATG-CATTAAAGGGACATGGACACATTTTGA
gi|10 : tgtatgtacatgTTAAAGGGACATGGACACGTTTTGAa
gi|11 : cgtccatgcTATC--GACTTTAAAGGGGCATGGACACGTTTTGA
gi|12 : t--G-CCTTAAAGGGGCATGGACACGTTTCGA
gi|13 : ctcta-CTTTAAAGGGACATGGACACGTTTTGAg
gi|14 : tC--G-CTTTAAAGGGACATGGACACGTTTTGAgc
gi|15 : t-CTTTAAAGGGGTATGGACACGTTTTGA
gi|16 : cTTAAAGGGGCATGGACACGTTCTGA
gi|17 : ac-CTTTAAAGGGGCATGGACACGTTTTGA
gi|2 : -CTTTAAAGGGACATGGACAAGTTTTGA
gi|3 : agtccgacgtaagttTTTAAAGGGGCATGGACACGTTTTGAgct
gi|4 : tgatctgaacagTCATATC--G-CGTTAAAGGGGCATGGACACGTTCTGAg
gi|5 : gtagTCAT-----G-CTTTAAAGGGACAGGGACACGTTTTGA
gi|6 : tgtgTACCATG-TTTTAAAGGGACATGGACACGTTTTGAg
gi|7 : tatATACC--CTCCTTAAAGGGGCATGGACACGTTTTGA
gi|8 : catTCA-ACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|9 : aTTAAAGGGGCATGGACACGTTCTGA
blockSeqs : AT A
blockSeqs : . T
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqCons : **
originalCons : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
finalCons : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
Alignments
lowQualScore : 11
lowQualScore : 22 6
lowQualScore : .. .
lowQualScore : 22 2
consensus : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
Reference ( family-875 ) : NTCATACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|1 : TACCATG-CATTAAAGGGACATGGACACATTTTGA
gi|10 : tgtatgtacatgTTAAAGGGACATGGACACGTTTTGAa
gi|11 : cgtccatgcTATC--GACTTTAAAGGGGCATGGACACGTTTTGA
gi|12 : t--G-CCTTAAAGGGGCATGGACACGTTTCGA
gi|13 : ctcta-CTTTAAAGGGACATGGACACGTTTTGAg
gi|14 : tC--G-CTTTAAAGGGACATGGACACGTTTTGAgc
gi|15 : t-CTTTAAAGGGGTATGGACACGTTTTGA
gi|16 : cTTAAAGGGGCATGGACACGTTCTGA
gi|17 : ac-CTTTAAAGGGGCATGGACACGTTTTGA
gi|2 : -CTTTAAAGGGACATGGACAAGTTTTGA
gi|3 : agtccgacgtaagttTTTAAAGGGGCATGGACACGTTTTGAgct
gi|4 : tgatctgaacagTCATATC--G-CGTTAAAGGGGCATGGACACGTTCTGAg
gi|5 : gtagTCAT-----G-CTTTAAAGGGACAGGGACACGTTTTGA
gi|6 : tgtgTACCATG-TTTTAAAGGGACATGGACACGTTTTGAg
gi|7 : tatATACC--CTCCTTAAAGGGGCATGGACACGTTTTGA
gi|8 : catTCA-ACC--G-CTTTAAAGGGGCATGGACACGTTTTGA
gi|9 : aTTAAAGGGGCATGGACACGTTCTGA