lowQualScore : 1 111 2222 11111111111 2222222222222222222222222222222222222222222222222222222 33 11 1 22222 11 22222222 11 1111 1111 1111111 2222222222222222 222222 2222222222 11 11 1 111111 1111 1 1 3 22 111111 22
lowQualScore : 3 3 3 3 8 55 44 3 3 999 1 3 3 3 77 3 3 44 3 3 3 3 3 22 3 999 44 3 3 333 3 2 3 3 0000 333 6 3 3 6 3 3 555 33333333333 2 2 999999 33 2222222222222222222222222222222222222222222222222222222 2 44 3 3 88 3 3 3 6 5 2 33 2 1 33 2 2 2 99999 44 5 2 5 2 2 77777777 3 6 3 6 3 3 333 3 3 3 3 3 7 9 9 3 9999 3 77 66 3 3 6 2222 3 3 44 3 77 44 6 3 77 3 555 3 3 44 44 9999 3 0000000 2 1111111111111111 44 888888 555 6666666666 3 6 44 3 3 3 3 3 3 3 1 88888 3 2 3 3 3 66 9 3 6 3 555 4 3 3 3 3 3 6 3 66 7 3 0 77 222222 3 3 44 3 3 3 3 3 88 3 444 888 33 0000 3 6 3 3 6666 3 3 44 3 3 6 1 44 44 3 2 3 3 3 88 9 111111 3 3 3 3 3 3 88 3 6 44 3 3 3 3 3 3 3 44 44 77 3 3
lowQualScore : . . . . . .. .. . . ... . . . . .. . . .. . . . . . .. . ... .. . . ... . . . . .... ... . . . . . . ... ........... . . ...... .. ....................................................... . .. . . .. . . . . . . .. . . .. . . . ..... .. . . . . . ........ . . . . . . ... . . . . . . . . . .... . .. .. . . . .... . . .. . .. .. . . .. . ... . . .. .. .... . ....... . ................ .. ...... ... .......... . . .. . . . . . . . . ..... . . . . . .. . . . . ... . . . . . . . . .. . . . .. ...... . . .. . . . . . .. . ... ... .. .... . . . . .... . . .. . . . . .. .. . . . . . .. . ...... . . . . . . .. . . .. . . . . . . . .. .. .. . .
lowQualScore : 1 1 1 1 5 00 66 3 3 222 8 3 3 3 99 3 3 99 3 3 3 3 3 99 3 111 66 3 3 999 3 5 3 3 4444 888 2 1 1 2 1 1 000 66666666666 9 9 666666 99 7777777777777777777777777777777777777777777777777777777 9 22 1 1 11 1 1 1 2 7 9 66 9 4 99 9 9 9 33333 44 7 9 7 9 9 88888888 1 2 1 2 1 1 999 1 1 1 1 1 4 2 2 1 0000 1 33 88 1 1 5 6666 1 1 00 1 33 22 2 1 33 1 444 1 1 22 22 8888 1 0000000 9 8888888888888888 22 777777 888 2222222222 3 7 66 3 3 3 3 3 3 3 2 33333 3 5 3 3 1 55 2 1 2 1 444 0 1 1 1 1 1 2 1 44 9 1 9 22 333333 1 1 22 1 1 1 1 1 55 1 666 555 99 0000 1 2 1 1 5555 1 1 22 1 1 7 0 22 22 1 5 1 1 1 88 2 999999 1 1 1 1 1 1 88 1 2 22 1 1 1 1 1 1 1 22 22 33 3 3
consensus : TATG-GAGAA-ATT-CT-TACCACTTTAT--TCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-T-CATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TA--G-CCTCCTGA-C-GTCA-GTAC-A-AATGTCA-A-T-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-T------------A-----------T-GTGC--A-TGGC-TGC-ATTTT-CT-AA-AGTTT-TA-GTT-T--CC-CC-TTC--GGTGTCCC-AA-T-G-CC--GTG-AGGC-T-AG-AAATGCC-A-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AATAA-TT-CAA-TAAA---GTT-GTC--AACATA-TTC-CG-GAAAA---ACCA-CTT-CTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T-T--TC--ATATCCGTT--GCTTT-TCG-------AAG-TG----------------AG--AAAGTGT-GCACTTTCTGT---GA--TTTTCA-AAGA-TT-G--T-T-G-TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-TC-TCCGCTT-C--AAA-CTTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-AT-TAC--AATT-G-TAATTTT-AAATA--TT--T-TTCTCTA-TTAATTT-CTTT-ACGT-AATGAC-C-GAT------A-A-TTCG-C-AA-TCAAG-ATG-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
Reference ( gi|8 ) : TATG-GAGAA-ATT-CT-TACCACTT-AT--TCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-T-CATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAC--AT-CCCT-TGT-TA--G-CCTCCTGA-C-GTCA-GTAC-A-AATGTCA-A-T-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-T------------A-----------T-GTGC--A-TGGC-TG--ATTTT-CT-AA-AGTTT-TA-GTT-T--CC-CC-TTT--GGTGTCCC-AA-T-G-C---GTT-AGGC-T-AG-AAATGCC-A-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AATGA-TT-CAA-TAAA---GTT-GTC--AACATA-ATC-CG-GAAAA---ACCA-CTT-CTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T-T--TC--ATATCCG-T--GCTTT-TCG-------AAG-TG----------------AG--AAAGTGT-GCACTTTCTGT---GA--TT--CA-GAGA-TT-G--T-T-G-TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-TC-TCCGCTT-C--AAA-CTTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTAAAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-AT-TAC--AATT-G-TAATTTTAAAAGA--TT--T-TTCTCTATTTAATTT-CTTT-ACGT-AATGA--C-GAT------A-A-TTCG-C-AA-TCAAG-AT--GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|6 : TATG-GAGAA-ATT-CT-TACCACTT-AT--T-AT--GAGCTT-AGTA-CC---A-G-TGA-TCT-AAAAG--T-TATGA-ATAA-T-CATTAAG-CATG-TAA-C-TTTTTCCGAATCAT-GAA---TA--T-TTTG-TAGAT--AT-CT-T-TGT-TA--GGCCTCCTGAAC-GTCA-GTAC-A-AAT-TCA-A-T-GAATAT-----------G-TAGC-AA---G-GATGACAT--TTCT----AT--------T-----------TA-T------------A-----------T-GTGC--AGTGGC-TGC-ATTTT-CT-AA-GTCTT-TATGTT-T--CC-CCATTT--GGTGTCCC-AACT-G-CC--GTTGAGGC-T-AG-AAATGCC-A-AAAC-G---G--T-GGATTT-T-GA-TTTGAA-AAGGA---C-TTT-CTT-G-AAA-AATAAATT-CAA-TAAA---GTT-GTC--AACATA--TT-CG-GAAAA----CCA-CTTTCTCAAT-T-T-CCGTTT--CCG--AATGCTG-GAA--TTA-GTGACCC---ATT-T-TGTTC--ATATCCG-TT-GCTTT-TCG-------AAG-TG----------------AG--AA---GT-GCACTTTCTGT---GA--TTTTCA-AAGA-TTTG--T-T-G-TACTGTT-TATAATG-G-A-T-AA-----ATG-GG-C-TC-TCTGCTT-C--AAAACTTTA-ATTG-TA-AA---TGGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGAAA-GTT-GTTT--CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-AT-TAC--AATT-G-TAATTT--AAATA--TT--A-TTCTCTA-TTAATTT-CTTT-ACGT-AATGAC-C-GAT------A-A-TTCG-C-AA-TCAAA-ATG-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|7 : aTATG-GAGAA-ATT-CT-TACCACTTTAT--TCAT--GAGCTT-AGTA-TC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAT-T-CATATAG-CATG-CAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCTCCTGA-C-GTCA-GTAC-A-AGTGTCA-A-T-GA---T-----------G-TAGC-AA---A-CATTACAT--TTC----TAT--------TGATAAAATGAATA-C------------A-----------T-GTGC--C-TGAC-TGT-AATTT-CT-AA-AGTTT-TA-ATT-TTCCT-CC-CTT--GGTGTCCC-AA-T-GCC---GTG-ATGCTT-AG-AAATGCC-A-AAAA-CA--G--T-T-ATTT-T-GA-TTTGAA-AACGA-A-C-TTT-CTT-G-AAA-AATAA-TT-CAA-TAAA---GTT-GTC--AACATA-TTC-CG-G-AAA---ACCA-CTT-CTTCATAT-TTCCGTTT--CCG--ATTGCTG-GAA--TTA-GTGACCC---TTG-T-T--TC--ATATCCGTT--GCTTT-TCG-------AAG-TG----------------AA--AAA--GT-GCACTTTTTGT---GATTTT--CA-AAGA-TT-G--T-T-G-AACTGTT-TA-AATG-G-A-TTAA-----ATA-GGGCTTC-TCCGCTT-C--AAA-TTTTA-ATTG-TT-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGCTG-CAT-------------------T---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-T--AAATAC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-TT-TAC--AAAT-G-TAATTTT-AAATA--TT--T-TTCTCTA-TTAATTT-CTTT-ACGT-TATGAC-C-GAT------A-A-TTCG-C-AA-TCAAG-ATG-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|5 : aTAGG-GAGAA-ATT-CT-TACCACTTTAT--TCAT--GAGCTT-AGTA-TC---AGG-TGA-TCT-AAAAA--T-TATGA-ATAT-T-CATTAAG-CATA-TAA-C-TTTTCCGAAATCAT-AAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCTCCTGA-C-GTCA-GTGC-A-TATGTCA-A-T-GA---T-----------G-TAGC-AC---A-CATGACAT--TTC----TAT--------T-----------TA-TAAAATGAATTGCA-----------T-GTGT--A-TGAT-TGC-ATTTT-CT-AC-AGTCT-TA-ATT-T--TTATC-GTC--GGTGTCCC-AA-T-GCC---GTG-AAGC-T-AG-AAATGCCAA-AAAA-CG--G--T-G-AGTT-T-GA-TTTGAA-AACGG-A-C-TTT-CTT-G-AAA-AATAA-TT-CAA-TAAA---GTT-GTC--AATATA-TTC-CG-G-AAA---ACCA-TTT-CTCAAA-T-GTTCGTTT--CTG--A-TGCTG-GAA--TTA-GTGATCC---TTG-T-T--AC--ATGTCCGTT--GCTTT-TCG-------AAG-T-----------------AA--AAAG-GT-GCAATTTTTGT---GATTTT--CA-AAGA-TT-G--T-T-G-AAATGTT-TATAATG-G-A-TTAA-----ATG-GGTC-TC-TCCGCCT-CA-AAA-ATTTA-ACTG-GA-AA---TGGAA-CTCTG-AA-T-A-T-TGTACCAGTTG-CATT-GAAAGTT-G-TTT-CATT---G--AA-AAG-A--TG-TG-A-TC-ATGG-AG----------AATGC---GATGC--TGGAATTAAAC-G-TGTA-T-TTATGCA----GAGGTCAG-TT-TAC--AATT-G-TAATTCT-AAATA--TC--T-TTCTTTA-TTAATTT-CTTT-ACGT-AATGA--CAGAT------A-A-TTCG-C-AA-TCAAG-ATG-GC-GGCATGC-AAT--T-T-AG-C-C-A-AA-T--GG--T--AAAAT-TTTC-ACCA
gi|4 : aTATG-GAGAACATTTCTGTACCACTTTAT--TCAT--GA-CTT-AGTG-CC---AGC-TGA-TCT-AAAAGGGT-TAGGACATAA-T-CATTAAG-CATG-TAAAC-TTTTCCGAAATCAT-AAACA-TACCT-TTTG-TAGATCTAT-CCCTATGT-TA--GGCCTCCTGA-C-GTCTTGTAC-A-AATGTCA-A-T-GA---T-----------G-TAGC-AA---G---TGGCAT--TC-----TAT--------T-----------TA-T------------A-----------TAGTGC--A-TGGC-TGC-ATTTT-CT-AA-AGTTTCTA-GTT-T--CC-CCCTTT--GGTGTACC-AA-TTG-CC--GGT-GAGC-T-AG-AAATGCC-A-AAAAAC---GGGT-G-ATTT-T-G--TTTGAA-AAGGA-A-C-TTTGCTT-G-AAA-A-TAACTT-GAA-TAAAC--GTT-GTC--ATAATA-TTC-CG-GAAAA----CCAGCTT-CTCA---T-ATCCGTTT--CCAGCA-TGCTG-GAAA-TTA-GTGACCC---ATG-T-T--TC--A-ATCGT-T--GCTTT-TCG-------AAG-TG----------------AG--AAAA----GCACTTTCTG----GA--TTTTCA-AAGA-TT-GGTC-T-G-TACTGTT-TATAATG-G-A-T--------ATGCGGGC-TC-TC-GCTT-C--AAA-CTTTA-ATTG-TA-AAATGTCGAA-CTCCGTAA-T-A-T-TTTACCAGT-G-CATTGAAA-GTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATGCT--AATGC--TGG----AAAC-G-TGTA-T-TTATGCAAAGTGAGGTCAG-A--TAC--AA-T-G-TAAATTTAAATGATTTT--T-TTCTCTA-TTAATTT-CTTT-ACGT-AATGA--C-GAT------ATT-TTCG-C-AA-TCAAGAATTGGC-GGCA-GC-AAA--TAT-AG-C-T---AA-T--GGCTT--AAAA
gi|3 : aTATGCGAGAA-ATT----TACCACTT-ATATTCAT--GAGCTTCAGTA-CC---ACGCTGA-TCTTAAAAG-----ATGA-ATAA-T-CATTAAG-CATG-TAA-C-TTTCC--AAATCATTGAA-A-TA--T-TTGT-TAGAT--ATTCCCT-TGT-TA--G-CCTCC-GA-C-GTCA-GTAC-A-AATGTCA-A-T-GA---TTGTACAAACATGCTAGCCAA---GCGATGA-----TTCT---TAT--------T-----------AA-T------------A-----------T-GTGC--A-TGCC-TGC-ATTTTTCT-AA-A-TTT-TA-GCT-TTCCC-CC-TTT--GGT-TCTC-CA-T-G-CC--GTG-AGGC-T-AGCAAATGCC-A-AAAA-C---GG-T-GCATTT-TTGA-TTGGAA-AAGGA-AAC-TTT-TTT-G-AAA-A-TAA-TTACAA-TAAA---GTT-GTC--AACA-A-CTT-CG-GAAAA---GC-A-CTT-CTCAAT-TGTTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACC----ATG-T-T--TC--ATATCCG-T--GCCTT-TCG-------AAGCTG----------------AG--AAACTG---CACTTTCTGT---GA--TT--TC-AAAA-TT-G--T-T-G-TAC-GTT-TATAATGCG-A-TTAA-----ATG-GGGC-TC-TCCGCCTAC--AAA-ACTTA-ATTGCTA-AA---T-GAA-CTCCG-AA-T-A-T-TTTACCAGTTGACAT--GAAAGTTAGCTTT-C-TT------AA-AAA-A--T--CG-A-CC-ACGG-AGAGAAT-GCAAAATGC---GATGCGGCGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-AT-TAC--AATT-G-TAATTTTTAAATA--TA--T-TT-TCCA-TTAATTCGCTTT-ACGT-AA-GAACC-GAT------A-T-TCCG---AA-TGAAG-AT--GG-CGCATGCAAAA--T-T-AG-C-T-A-AA-T---G--T--AAAAA--TTC-TCCA
gi|1 : TATG-GAGAA-ATT-CT-TACCACTTTAT--TCAT--GAGCTT-AATAACC---ACG-TGA-TCT-AAAAT--TCTATGA-ATAA-T-CATTAAG--AT--TAA-C-TTTGCCGAAATCAT-GAA-A-TA--T-TTTG-TAGATT-AT-CC-T-TGT-TA--G-CCTCCTGA-CCGTCAAGTAC-A-AATGTCATA-T-G----T-----------G--AGC-AA---G-GATGACATCCTTCT----AT--------T-----------TA-T------------A-----------T-GT-C--A-TGGC-TGC-ATTTT-CT-AA-AGTAT-TA-GTT-T--CC-C--TTT--GGTGTCCC-AA-T-G-CC--GTG-AGGCGT-AG-AGTCGC----AAAA-C---G--TTG-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AATAA-TTTCAA-TAAATCAGTT-ATCGCAACATATATT-CC-GGAAA---ACCA-TTT-CTCATC-T-TTCCGTTT--CCG--A-TGCTGCGAAATTCA-GTGACCCGGCATG-T-T--TC--ATATCCG-TT-GCTTTGTCGAAGTGAGAAG-TGCACTTCTGTGATTTTCAA--AGATTGTTGTACTGTTTATAATGA--TT--AATGGGG-CT-C--TCT-GCTATTGTTCTACAACG-TCA-CTAATTTGTGTG-AACC-TT-TCCGT----------CTT---ATTG-TA-AT---TTGT--CTCCG-A--T-A-T-TTTACCAGTTG-CATTCGGAATAT-G-TTT-CATT---T--GA-AAA-T--TG-CGAA-CC-ATGG-AGA--AT-A--AAATGC---GATGC--TGG----AAAC-GTTGTA-T-TTATGCA----GAGGTCAG-AT-TACATAATT-G-TAATTTTAAATAT--TT--T-TTCTCTTATTAATTT-CTTT-ACGT-AATGAC-C-GATA-----A-A-TTCG-C-AA-TCAA--AT--GG-CGCATGCAAAA--T-T-AG-CTT-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|6 : ATG-GAGAA-ATT-TT-TACCATTT-A
gi|2 : atatggagaaattcttaccacttattatgagcttagtaccagtgatctaaaagttatgaataatcattaagcatgtaactttttccgaatcatgaatattttgtagatatctttgttaggcctcctgaacgtcagtacaaattcaatgaatatgtagcaaggatgacatttctatttatatgtgcagtggctgcattttctaagtctttatgtttccccatttggtgtcccaactgccgttgaggctagaaatgccaaaacggtggattttgatttgaaaaggactttcttgaaaaataaattcaataaagttgtcaacatattcggaaaaccactttctcaatttccgtttccgaatgctggaattagtgacccattttgttcatatccgttgcttttcgaagtgagaagtgcactttctgtgattttcaaagatttgttgtactgtttataatggataaatgggctctctgcttcaaaactttaattgtaaatggaactccgaatattttaccagttgcattgaaagttgtttcattgaaaaaatgcgaccatggagaatgaaatgcgatgctggaaacgtgtatttatgcagaggtcagattacaattgtaatttaaatattattctctattaatttctttacgtaatgaccgataattcgcaatcaaaatggcggcatgcaaattagcATG-GAGGG-ATT-CT-TACCACTTTAT--TCAT--GAACTT-AGTA-TG---AGG-TGA-TCT-AAAAAC-T-TATGA-ATAT-T-CATTAAG-CACG-TAA-C-TTTTCGGAAATCAT-AAA-C-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCCCCTGA-C-GTTA-GTAC-A-AATGTCA-A-T-GA---T-----------G-TAGC-AA---A-CATGACCT--TTCTATTTATAAAATGAAT-----------TA-C------------A-----------T-GTGC--A-TGGT-TGC-ATTTT-CT-AA-TGTCT-TA-ATT-TT-CC-CC-CTC--GGTGTCCC-AA-T-G-CT--GCG-AAGC-A-AG-AAATGCC-A-AAAC-G---G--T-G-ATTT-T-GA-TTTAAA-AACGA-A-C-GTT-CTT-G-AAA-AATAA-TT-CAA-TAAT---GTT-GTC--AACATA-TTCACG---AAA---ACCA-CTT-CTCAAC-T-TTCCTTTT--CCG--A-TG-----AA--TTA-GTGACCC---TTG-T-T--AC--ATATCCG-TT-GCTTT-TCG-------AAG-TG----------------AT--AAAGTG---CAATTTCTGT---GA--TTTTCA-AAGA-TT-G--T-T-G-AAATGTT-TATAATT-G-A-TTAA-----ATG-AGGC-TC-TCCGCTT-C--AAAACTTTA-ATTG-GA-AA---TGGAA-CTCCG-AA-T-A-T-TGTACCAGTTG-CATTGAAA-GTT-GTTT--CTTT---G--AC-AAG-A--TA-CG-A-TC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AGAC-G-TTTA-T-TTATGCA----GAGGCCAG-TT-TAA--AGTT-G-CAATTTT-AAATA--TT--T-TTCTCTA-TTAATTT-CTTT-ACGT-AATGA--CAGATCTGAGGA-G-TTCG-C-AA-TCAAG-ATG-GCAGGCCTGC-AAA--T-T-AG-C-C-ACAA-TTCGG--T--AAACA-TTTCGTCCA
gi|11 : ATG-G-GAA-ATC-TT-AACCACTT-TA--TCAT--GAGCTT-AGTA-CG---ATG-TGA-TCT-AAAGG--T-AATGA-ATAA-T-CAATAAGTCATGCTAA-C-TTTTCC-AAATCAT-GAAGA-TA--T-TTTG-TATAT--AT-CCCT-TGTCTA--GGCCTCC-GA---GTCA-GTAC-AGAATGTCC-A-T-GA---T-----------G----------------GACAA--TTTC---TAT--------T-----------TACT------------A-----------T-GTGGGAA-TGGC-TGC-ATTTT-CT-AC-CGTTT-TAAGTT-T--CC-CCCTTT--GGTG-CCC-AA-T-G-CCCGATG-AGGC-T-AG-AAATGCC-A-AAAA-CCA-A--T-G-ATTT-TTGA-TT-GAACAAGGA-A-CCTTT-CTTTG-AAG-AATGA-TTTCAA-TAA----GTT-GTC--AACATA-TTC-CG-GAAAA----CCA-CTT-CTCAAT-T-T-CCGTT----CG--A-TGCTG-GAA--TTA-GTTACCC---ATG-T-T--TC--ATA-CCG-TTTGCTT---CG-------AAG-TG----------------AG--AAAGTG---CACTTTCTGT---GA--TTTTCA--AGA-TT-G--T-T-G-TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-TC-TC---------AAA-ACTTA-ATTG-TA-AA---TCGAA-CTC-G-AA-TCA-T-TTTACCAGTTG-CATTGAAA-GTT-GTTTTTCATTCATG--AATAAATA--TG-CG-AACC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-AT-T------TT-----------AAATA--TT--T-TTCTCTA-TTAATTT-CTTT-ACGT-AATGAC-C-GAT------A-A-TTCG-C-AA-TCAAG-ATG-GC-GGTATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTA-TCCA
gi|7 : tgTG-GAGAA-ATT-TT-TACCATTT-A
gi|12 : atatggagaaattcttaccactttattcatgagcttagtatcacgtgatctaaaagttatgaatattcatatagcatgcaacttttccgaaatcatgaaatattttgtagatatcccttgttaaggcctcctgacgtcagtacaagtgtcaatgatgtagcaaacattacatttctattgataaaatgaatacatgtgcctgactgtaatttctaaagttttaattttcctcccttggtgtcccaatgccgtgatgcttagaaatgccaaaaacagttattttgatttgaaaacgaactttcttgaaaaataattcaataaagttgtcaacatattccggaaaaccacttcttcatatttccgtttccgattgctggaattagtgacccttgtttcatatccgttgcttttcgaagtgaaaaagtgcactttttgtgattttcaaagattgttgaactgtttaaatggattaaatagggcttctccgcttcaaattttaattgttaatcgaactccgaatattttaccagctgcattgaaaaaatgcgaccatggagaattaaatacgatgctggaaacgtgtatttatgcagaggtcagtttacaaatgtaattttaaatatttttctctattaatttctttacgttatgaccgataattcgcaatcaagatggcggcatgcaaattagcTG-GAGAA-ATT-CT-TAC-ACTTTAT--TCAG--GAGCTT-AGTA-C----ACG-TGA-TCT-AAAAG--T-TATGA-ATAA---CATTAAG-CATG-TAA-C-TTTTC-GAAATCAT-GAA-A-TA--T-TT-G-TAGAT--AT-CC-T-TGT-TA--G-GCCTCTGA---GTCA-GTAC-A-AATGTCA-A-T-GA---T-----------G-TAGC-AA---G-GATGACAT--TT-----TAT--------T-----------TA-T------------A-----------T-GTGC--A-T-GC-TG--CATTT-CTAAA-AGTTT-TA-GTT-T---C-CT-TTT--GGTGTCCC-AA-T-GAC---GTG-AGGC-TGAG-AAATGC----AAAA-CG--G--T-G-ATTT-T-GA-TTTGAA-AAAGC-G-C--TT-CTT-G-TAA-AAT-A-TT-C-A-T-AA---GTT-GTC--AACAT--ATC-CG-GAAAA-----CA-ATT-CTCAAT-T-TTCCGTTT---CG--A-TGCTG-GAA--TTA-GTGACCT---ATG-T-T--TC--ATATCGT-T--GCTTT-TCG---------G-TG----------------AG--AAA--GT-GCA----CTGT---GATTTT--CA--ATA-TTGG--T-T-G-TACTG-T-TAT------------A-----ATG-GGGC-TC-T-CGCTT-CA-AAA-CTTTA-ATTG-TA-AA---TCGAA-CTCCG-AA---A-T-TTTACCAGTTG-CATT-GAAAGTT-G-TTT-CATT-------A-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG----AAACTG-T-TATT-TTATGCA----GAGGTCAGAAT-TAC--AATT-G-TAATTTT--AATA--TT--T-TTCTCTATTAAATTT-CTTT-ACGT-AATGAC-C-GAT------A-A-TTCG-C-AA-TCAAG-AT--GC-GGCATGC--AA--T-T-AG-C-T-A-AA-C--GG--T--AAAAA-TTTC-TCC
gi|1 : tacTG-GAGAA-ATT-TT-TACCATTT-A
gi|13 : tatggagaaattcttaccactttattcatgagcttaataaccacgtgatctaaaattctatgaataatcattaagattaactttgccgaaatcatgaaatattttgtagattatccttgttagcctcctgaccgtcaagtacaaatgtcatatgtgagcaaggatgacatccttctatttatatgtcatggctgcattttctaaagtattagtttccctttggtgtcccaatgccgtgaggcgtagagtcgcaaaacgttgattttgatttgaaaaggaactttcttgaaaaataatttcaataaatcagttatcgcaacatatattccggaaaaccatttctcatctttccgtttccgatgctgcgaaattcagtgacccggcatgtttcatatccgttgctttgtcgaagtgagaagtgcacttctgtgattttcaaagattgttgtactgtttataatgattaatggggctctctgctattgttctacaacgtcactaatttgtgtgaacctttccgtcttattgtaatttgtctccgatattttaccagttgcattcggaatatgtttcatttgaaaattgcgaaccatggagaataaaatgcgatgctggaaacgttgtatttatgcagaggtcagattacataattgtaattttaaatattttttctcttattaatttctttacgtaatgaccgataaattcgcaatcaaatggcgcatgcaaaattagct-GAGAG--TT-CT-TACCACTT-TA--TCATACGAGCTT-AGTA-CCC--ACG-TGC-TCT-AAAAG--T-TATGA-ATA--T-CAT-AAG-CATG-TAA-CACTTT------TCAC-G-----------TTTGATAGAT--AT-TCCT-TGT-TA--GGCCTCCTGA-C-GTCA-GTAC-A-AATGTCA-A-TCGA---T-----------G-TAGC-AAA--G-GATGA-AT--TTCT---AAT--------A-----------TA-T------------A-----------T-GTGC--A-TGGCATGC-ATTTT-CT-AA-AGTTTATA-TTT-C--CC-CC-TTT--GGTGTCCC-AA-G-C-C---GTG-AGG--T-AG-AAATGCC-ACAAAA-TACGG--T-G-ATTTAT-GA-TTTGAA-AGGGACA-C-TTT-CTT-GTAAATAATAA-TT-CAAATGA-----TT-GTC--AACATATATT-CACGAAAA---ACCA-CTT-CTCAA--T-TTCCGTTTG-CCG--A-TGCTG-GAA--TTATGTGACCC---ATG-TCT--TC--AT-TCCGTT--GCTTT-C----------AG-TGC---------------AG--AA
gi|9 : aT--TCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-A-AA-TCCATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-AA--TATTTG-TAGAT--AT-CCCT-TTT-TAG-G-CCTCCTGA-C-GTCA-GTACAA-AATGTCATATT-GA---T-----------G-TAGC-AACCTG-GAGAACAT--TTC----TAT--------T-----------TA-T------------A-----------T-GTGC--A-TGGC-TGC-ATTTT-CT-AATAG-TT-TA-GTT-TC-CC-CC-TTC--GGTGTCCC-AA-T-GCC---GTG-AGGC-T-AGAAAATGCC-A-AAAA-CG--G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AATAA-TT-CAA-TAAA---GTT-GTC--AAAATA-TTC-CG-G-AAA---ACCA-CTT-CTCAAT-T-TTCCGTTT--TCG--A-T-TTG-GAA--TTA-GTTACCC---ATG-T-T--TCATATATCCGTT--GCTTT-TCG-------AAG-TG----------------AG--AAAGT-T-GCACTTTCTGT---GATTTT--CA--AAA-TT-G--T-T-G-TACTG-T-TATTATG-G-A-TTAA-----AT--GGGC-TC-TCCGCTT-CA-AAA-CTTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-A-TTTACCAGTTG-CATT-GAAAGTT-GTTAT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATAC---GATGC--TGG----AAAC-G-TGTA-T-TTATGCA----GAGGTCAG-ATATAC--AATT-G-TAATTTTAAATAT--TT--T-TTCTTTA-TTAATTT-CTTT-ACGT-AATGAC-C-GAT------A-A-TTCG-C-AA-TCAAG-ATG-GC-TGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAATTTTC-TCC
gi|10 : AT--GAGCTT-AGT--CCGTGACG-TGAATCT-AAAA---C-TATGA-ATAAAT-CATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-AGTA--T-TTTG-TAGAT--AT-CGCT--GT--G--G-CCTCCTGA-C-GTCA-GCAC-A-AATGTCA-A-T-GA---T-------------TAGC-AA---G-GATGACAT--TTCT----AT--------T------------A-T------------A-----------T-GTGC--A-TGGC-TGCAATTTT-CT-AA-AGTTT-TA-GTT-T--CC-CC-CTTTGGGTGTCCCGAA-T-G-CC--GTG-AGGC-T-GA-AAATGCC-A-AAAAAC---GG-T-G-ATTT-T-GAATTTGAA-AAGGA-A-C-TTT-CTA-G-AAA-AATAAATT-CAA-TAAA---GTTTGTCC-AACATA-ATT-CC-GGAAA---ACC--CTT-CTTCAT-T-TTCCGTTTTGCCG--A-TGCTG---A--TTA-GTGACCA---ATG-T-T--TC--ATATCCG-T--TGTTT-TCG-------AAG-TG----------------AG--AAAGT----CACTTTCTGT---GA--TTTTCA-AAGA-TT-G--T-TTG-TACTGTT--ATAATG-G-A-TTAA-----ATG-GGGC-TCCTCCGCTT-A--AAAATTTTA-ATTG-TA-AA---TTGAA-CTCCG-AA-T-A-T-TTTAC--ATTG-CATTGAACAGTT-G-TTT-CATT---GAAAA-AAA-A--TG-CG-A-CCGATGG-AGA--AT-G--AAATGC---GATGC--TGGAC--AAAC-G--GTA-T-TTATGCA----GA-GTCAG-AT-TAC--AATT-G-TAATTTAAAATAA--TT--T-TTCTCTA-TTAATTT-CTTT-ACGTAAATGAC-C-GAT------A-A-TTCG-CAAA-TCAAG-ATG-GC-GGCATGC-AAATTT-T-AG-C-TAA-AA-T--GG--T--AAAAA-TTTC-ca
gi|14 : TCCTGA-C-GTCA-GTAC-A-AGTGTCA-A-T-GA---T-----------G-TAGC-AA---A-CATGGCAT--TTCT----AT--------T-----------TA-T------------ACAAAGAATACAT-GTGC--A-TGAC-TGC-ATTTT-CT-AA-AGTTT-TA-ATTAT--CC-TC-ATC--GGTGTCCC-AA-T-GTC---GTG-AAGC-T-AG-AAATGCC-A-AAAAAC---G--T-G-ATTT-T-GA-TTTGAA-AAAG-------TT-CTT-G-AAA-AATAA-TT-CAA-TAAA---GTT-GTC--AACATA-TTC-CA-AAAAAAAAACCA-CTT-CTCAGT-T-CTCTGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---GTGTT-T--TT--ATATCCGTT--GCTTT-GCA-------AAG-TG----------------
gi|19 : A---T-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-T------------A-----------T-G
gi|20 : cactgaatctgtacgggccacA-GTT-T--CC-CCCTTT--GGTGTACC-AA-T-G-CC--GTG-AGGC-T-AG-AAATGCC-A-AAA
gi|16 : G-TG----------------AAGCAAAGT----CACTTTCTGT---AT--TT--CA-AAGAATT-G--T-T-G-TACGGTT-TATAATG-G-AATTAA-----ATG-GG-C-TC-TCCGCTT-CA-AAA-CTTTAGATTGTTA-AA---TCG-A-CTCCT-AA-T-AGTATTTACCAGTTG-CATTGAACAGTT-TGTTT-CATTA--G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--ATGG--AAATGC---GATG---TGG----AAA
gi|15 : GCTT-CCAAAA-CTTTA-ATTG-GACAA---TGGAAACTCCG-AAAT-A-TATGTACCAGTTG-CATTGCAAAGTT-GTTT--CATT---G--GA-AAA-AGATAACG-A-CC-ATGGGAGACAAT-G--AAATGCCGCGATGC--TGA----AAAC-G-TGTA-T-TTTTGCA----GAGGTCAG-TT-TAC--AATT-GCTAA-ATTGAAATA--TT--TATTCTCT-----ATTT-CTTT-ACTA-AATGA--CAGAT------A-ATTTCGCC-AA-TCAAG-AT--GC-GGCATGC-AAA--T-TCAG-C-C-A-AAGT--GG--TA-AAAAA-TTTC-TCCA
gi|17 : GC--TGG----AA-C-GATGTA-TCTTATGCA----GAGGTCAG-AT-TAC--AATTGG-TAATTTT-AAATA--TTCCT-TTCTCTA-TTAATTT-CTTTCACGT-AATGAC-C-GAT------A-A-TTCG-C-AATTCAAG-ATG-GC-GCAATGC-AAA--T-T-AGAC-T-A-AA-T--GG--TTAAAAAA-TTTC-TCCt
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|18 ): ACCAATCGCTAACTACTCGGCTATCTCCCGGTAACGTGAAATTTGAACGAGCAGGAT
Alignments
lowQualScore : 1111 11111111111 11111 11111111111111111111 222222222222 11 11 22222222 1111 1111 2222 1111111 111111111 11 11111111111 1111 11 111111 111 111111
lowQualScore : 3 3 3 3 3 44 3 3 888 0 3 3 3 77 3 3 33 3 3 3 3 3 1 3 777 44 3 3 77 3 1 3 3 8888 2 2 5 2 2 5 5 444 22222222222 2 2 777777 33 88888 55555555555555555555 2 666666666666 2 33 2 2 2 2 2 5 5 2 22 2 44 6 2 2 2 33 5 5 2 5 2 77777777 5 2 2 5 2 2 33 2 2 2 2 2 2 2 5 8 2 1111 2 66 2 77 2 0 8888 2 2 66 2 66 66 2 2 66 2 555 2 66 33 2 2 2 2 33 1111 0000000 222222222 44 0 6 00 44444444444 3 3 3 3 77777 3 3 3 2 3333 666 2 5 2 555 3 2 2 2 2 2 5 2 88 2 6 99 000000 2 2 33 2 2 2 2 2 77 2 555 777 33 33 5555 2 5 2 2 6666 44 2 33 5 2 2 2 000 33 2 2 2 2 2 2 2 111111 2 2 2 2 2 33 0 2 5 33 2 2 2 2 2 2 2 33 33 66 3 3
lowQualScore : . . . . . .. . . ... . . . . .. . . .. . . . . . . . ... .. . . .. . . . . .... . . . . . . . ... ........... . . ...... .. ..... .................... . ............ . .. . . . . . . . . .. . .. . . . . .. . . . . . ........ . . . . . . .. . . . . . . . . . . .... . .. . .. . . .... . . .. . .. .. . . .. . ... . .. .. . . . . .. .... ....... ......... .. . . .. ........... . . . . ..... . . . . .... ... . . . ... . . . . . . . . .. . . .. ...... . . .. . . . . . .. . ... ... .. .. .... . . . . .... .. . .. . . . . ... .. . . . . . . . ...... . . . . . .. . . . .. . . . . . . . .. .. .. . .
lowQualScore : 6 6 6 6 6 22 1 1 555 8 1 1 1 33 1 1 88 1 1 1 1 1 5 1 777 22 1 1 33 1 5 1 1 1111 9 9 7 9 9 7 7 777 77777777777 7 7 666666 77 77777 11111111111111111111 7 333333333333 7 99 9 9 9 9 9 7 3 7 77 7 33 9 7 7 7 77 3 3 7 3 7 33333333 7 9 9 7 9 9 66 9 9 9 9 9 9 9 7 6 9 2222 9 88 9 99 9 8 1111 9 9 66 9 88 88 9 9 88 9 000 9 88 99 9 9 7 7 99 2222 0000000 333333333 22 5 2 44 66666666666 1 1 1 1 77777 1 1 1 8 6666 222 9 7 9 000 0 9 9 9 9 9 7 9 55 9 0 66 777777 9 9 99 9 9 9 9 9 99 9 444 999 77 77 7777 9 7 9 9 1111 88 9 99 7 9 9 9 777 99 9 9 9 9 9 9 9 111111 9 9 9 9 9 99 7 9 7 99 9 9 9 9 9 9 9 99 99 88 1 1
consensus : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TA--GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AACATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
Reference ( family-7110 ) : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TA--G-CCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AACATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|1 : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AATAACC---ACG-TGA-TCT-AAAAT--TCTATGA-ATAA-TC-ATTAAG--AT--TAA-C-TTTGCCGAAATCAT-GAA-A-TA--T-TTTG-TAGATT-AT-CC-T-TGT-TA--G-CCTCCTGA-CCGTCAAGTACA-AA-TGTCATAT-G----T-----------G--AGC-AA---G-GATGACATCCTTCT----AT--------T-----------TA-TA------------T-GT-C--A-TGGC-TGCA-TTTT-CTAA-AGTAT-TA-GTT-T--CC-CT--TT-GGTGTCCC-AA-T-GCC--G-TGAGGCGT-AG-AGTCGC---AAAA-C---G--TTG-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TTTCAA-TAAATCAGTT-ATCGCAACATA-TATTC-CGGAAAA----CCA-T-TTCTCATC-T-TTCCGTTT--CCG--A-TGCTGCGAAATTCA-GTGACCCGGCATG-T--TTC--ATATCCGTT-GCTTTGTCGAAG-TG-AG--AA-GTGCACTTCTGTGATTTTCAAAGATTGTTGTACTGTTTATAATGA-TTA--ATGGGGCTCTCTGCTATTGTTCTACAACG-TCA-CTAATTTGTGTG-AACC-T-TTCCGT----------C-TT---ATTG-TA-AT---TTGT--CTCCG-A--T-A-T-TTTACCAGTTG-CATTCGGAATAT-G-TTT-CATT---T--GA-AAA-T--TG-CGAA-CC-ATGG-AGA--AT-A--AAATGC---GATGC--TGG--AA----AC-GTTGTAT-TT-ATGCA----GAGGTCAGA-T-TACATAATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTCTTA-TT-AATTT-CTTT-ACGT-AATGACCGATA-----A-A-TTCG-C-AA-TCAA-A--TGGC--GCATGCAAAA--T-T-AG-CTT-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|10 : AT--GAGCTT-AGT--CCGTGACG-TGAATCT-AAAA---C-TATGA-ATAAATC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-AGTA--T-TTTG-TAGAT--AT-CGCT--GT--G--G-CCTCCTGA-C-GTCA-GCACA-AA-TGTCA-AT-GA---T-------------TAGC-AA---G-GATGACAT--TTCT----AT--------T------------A-TA------------T-GTGC--A-TGGC-TGCAATTTT-CTAA-AGTTT-TA-GTT-T--CC-CCCTTTGGGTGTCCCGAA-T-GCC--G-TGAGGC-T-GA-AAATGCCA-AAAAAC---GG-T-G-ATTT-T-GAATTTGAA-AAGGA-A-C-TTT-CTA-G-AAA-AAT-AAATT-CAA-TAAA---GTTTGTCC-AACATAAT--TC-CGGAAAA----CC--C-TTCTTCAT-T-TTCCGTTTTGCCG--A-TGCTG---A--TTA-GTGACCA---ATG-T--TTC--ATATCCGTT-G-TTT-TCGAAG-TG-AG--AAAGT---C-------ACTTTC---------TGTG--ATTTTCAAAGA-TTGT-TTG-----------TACTG-T-TATAATG-G-A-TTAA-----ATG-GGGC-TCCTCCGCTTAA--AAA-T-TTTA-ATTG-TA-AA---TTGAA-CTCCG-AA-T-A-T-TTTAC--ATTG-CATTGAACAGTT-G-TTT-CATT---GAAAA-AAA-A--TG-CG-A-CCGATGG-AGA--AT-G--AAATGC---GATGC--TGGACAA----AC-G--GTAT-TT-ATGCA----GA-GTCAGA-T-TAC--AATTG-TAA-TTTA-AAATAA---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGTAAATGACCGAT------A-A-TTCG-CAAA-TCAAGA--TGGC-GGCATGC-AAATTT-T-AG-C-TAA-AA-T--GG--T--AAAAA-TTTC-
gi|11 : ATG-G-GAA-ATC-TT-AACCACTT-TAT-CAT--GAGCTT-AGTA-CG---ATG-TGA-TCT-AAAGG--T-AATGA-ATAA-TC-AATAAGTCATGCTAA-C-TTTTCC-AAATCAT-GAAGA-TA--T-TTTG-TATAT--AT-CCCT-TGTCTA--GGCCTCC-GA---GTCA-GTACAGAA-TGTCC-AT-GA---T-----------G----------------GACAA--TTTC---TAT--------T-----------TACTA------------T-GTGGGAA-TGGC-TGCA-TTTT-CTAC-CGTTT-TAAGTT-T--CC-CCC-TTTGGTG-CCC-AA-T-GCCCGA-TGAGGC-T-AG-AAATGCCA-AAAA-CCA-A--T-G-ATTT-TTGA-TT-GAACAAGGA-A-CCTTT-CTTTG-AAG-AAT-GA-TTTCAA-TAA----GTT-GTC--AACATA-T--TC-CGGAAAA----CCA-C-TTCTCAAT-T-T-CCGTT----CG--A-TGCTG-GAA--TTA-GTTACCC---ATG-T--TTC--ATA-CCGTTTGCTT---CGAAG-TG-AG--AAAGTG--C-------ACTTTC---------TGTG--ATTTTCAA-GA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTC---------AAA-A-CTTA-ATTG-TA-AA---TCGAA-CTC-G-AA-TCA-T-TTTACCAGTTG-CATTG-AAAGTT-GTTTTTCATTCATG--AATAAATA--TG-CG-AACC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAG-----------------A-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGTATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTA-TCCA
gi|12 : tgTG-GAGAA-ATT-CT-TAC-ACTT-TATTCAG--GAGCTT-AGTA-C----ACG-TGA-TCT-AAAAG--T-TATGA-ATAA--C-ATTAAG-CATG-TAA-C-TTTTC-GAAATCAT-GAA-A-TA--T-TT-G-TAGAT--AT-CC-T-TGT-TA--G-GCCTCTGA---GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TT-----TAT--------T-----------TA-TA------------T-GTGC--A-TG-C-TGCA-TTTC-TAAA-AGTTT-TA-GTT-T--CC-TT--TT-GGTGTCCC-AA-T-GAC--G-TGAGGC-TGAG-AAATGC---AAAA-C---GG-T-G-ATTT-T-GA-TTTGAA-AAAGC-G-C-TT--CTT-G-TAA-AAT-A--TT-CA--TAA----GTT-GTC--AACATA-T---C-CGGAAAA-----CA-A-TTCTCAAT-T-TTCCGTTT--C-G--A-TGCTG-GAA--TTA-GTGACCT---ATG-T--TTC--ATATC-GTT-GCTTT-TCG--G-TG-AG--AAAGTG--C-------ACT-------------GTG--ATTTTCAA-TA-TTGG-TTG-----------TACTGTT-----------A-T--A-----ATG-GGGC-T-CTC-GCTT-C--AAAAC-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA---A-T-TTTACCAGTTG-CATTG-AAAGTT-GTTT--CATT-------A-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----ACTG-T-TAT-TTTATGCA----GAGGTCAGAAT-TAC--AATTG-TAA-TTTT--AAT-A---TT--T-TTCTC-TA-TTAAATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC--AA--T-T-AG-C-T-A-AA-C--GG--T--AAAAA-TTTC-TCC
gi|13 : tac-GAGAG--TT-CT-TACCACTT-TAT-CATACGAGCTT-AGTA-CCC--ACG-TGC-TCT-AAAAG--T-TATGA-ATA--TC-AT-AAG-CATG-TAA-CACTTT------TCAC-G-----------TTTGATAGAT--AT-TCCT-TGT-TA--GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-ATCGA---T-----------G-TAGC-AAA--G-GATGA-AT--TTCT---AAT--------A-----------TA-TA------------T-GTGC--A-TGGCATGCA-TTTT-CTAA-AGTTTATA-TTT-C--CC-CC--TTTGGTGTCCC-AA---GCC--G-TGAGG--T-AG-AAATGCCACAAAA-TACGG--T-G-ATTTAT-GA-TTTGAA-AGGGACA-C-TTT-CTT-GTAAATAAT-AA-TT-CAAATGA-----TT-GTC--AACATA-TATTC-ACGAAAA---ACCA-C-TTCTCAA--T-TTCCGTTTG-CCG--A-TGCTG-GAA--TTATGTGACCC---ATG-TC-TTC--AT-TCCGTT-GCTTT-C---AG-TGCAG--AA
gi|14 : aTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGGCAT--TTCT----AT--------T-----------TA-TACAAAGAATACA-T-GTGC--A-TGAC-TGCA-TTTT-CTAA-AGTTT-TA-ATTAT--CC-TC--ATCGGTGTCCC-AA-T-GTC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---G--T-G-ATTT-T-GA-TTTGAA-AAAG-------TT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AACATA-T--TC-CAAAAAAAAAACCA-C-TTCTCAGT-T-CTCTGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---GTGTT--TTT--ATATCCGTT-GCTTT-GCAAAG-TG-
gi|15 : GCTT-CCAAAA-C-TTTA-ATTG-GACAA---TGGAAACTCCG-AAAT-A-TATGTACCAGTTG-CATTGCAAAGTT-GTTT--CATT---G--GA-AAA-AGATAACG-A-CC-ATGGGAGACAAT-G--AAATGCCGCGATGC--TGA--AA----AC-G-TGTAT-TT-TTGCA----GAGGTCAGT-T-TAC--AATTGCTAA-ATTG-AAAT-A---TT--TATTCTC-T------ATTT-CTTT-ACTA-AATGACAGAT------A-ATTTCGCC-AA-TCAAGA--T-GC-GGCATGC-AAA--T-TCAG-C-C-A-AAGT--GG--TA-AAAAA-TTTC-TCCA
gi|16 : G-TG-AAGCAAAGT---C-------ACTTTC---------TGTA----TTTCAAAGAATTG--TTG-----------TACGGTT-TATAATG-G-AATTAA-----ATG-GG-C-T-CTCCGCTT-CA-AAA-C-TTTAGATTGTTA-AA---TCG-A-CTCCT-AA-T-AGTATTTACCAGTTG-CATTGAACAGTT-TGTTT-CATTA--G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--ATGG--AAATGC---GATG---TGG--AA----At
gi|17 : GC--TGG--AA-----C-GATGTATCTT-ATGCA----GAGGTCAGA-T-TAC--AATTGGTAA-TTTT-AAAT-A---TTCCT-TTCTC-TA-TT-AATTT-CTTTCACGT-AATGACCGAT------A-A-TTCG-C-AATTCAAGA--TGGC-GCAATGC-AAA--T-T-AGAC-T-A-AA-T--GG--TTAAAAAA-TTTC-TCC
gi|19 : attgA---T-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-G
gi|2 : cactgaatctgtacgggccacATG-GAGGG-ATT-CT-TACCACTT-TATTCAT--GAACTT-AGTA-TG---AGG-TGA-TCT-AAAAAC-T-TATGA-ATAT-TC-ATTAAG-CACG-TAA-C-TTTTCGGAAATCAT-AAA-C-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCCCCTGA-C-GTTA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGACCT--TTCTATTTATAAAATGAAT-----------TA-CA------------T-GTGC--A-TGGT-TGCA-TTTT-CTAA-TGTCT-TA-ATT-TT-CC-CC--CTCGGTGTCCC-AA-T-GCT--G-CGAAGC-A-AG-AAATGCCA-AAAC-G---G--T-G-ATTT-T-GA-TTTAAA-AACGA-A-C-GTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAT---GTT-GTC--AACATA-T--TCACG--AAA---ACCA-C-TTCTCAAC-T-TTCCTTTT--CCG--A-TG-----AA--TTA-GTGACCC---TTG-T--TAC--ATATCCGTT-GCTTT-TCGAAG-TG-AT--AAAGTG--C-------AATTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATT-G-A-TTAA-----ATG-AGGC-T-CTCCGCTT-C--AAAAC-TTTA-ATTG-GA-AA---TGGAA-CTCCG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CTTT---G--AC-AAG-A--TA-CG-A-TC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AG----AC-G-TTTAT-TT-ATGCA----GAGGCCAGT-T-TAA--AGTTG-CAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACAGATCTGAGGA-G-TTCG-C-AA-TCAAGA--TGGCAGGCCTGC-AAA--T-T-AG-C-C-ACAA-TTCGG--T--AAACA-TTTCGTCCA
gi|20 : A-GTT-T--CC-CCC-TTTGGTGTACC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAA
gi|3 : TATGCGAGAA-ATT----TACCACTTATATTCAT--GAGCTTCAGTA-CC---ACGCTGA-TCTTAAAAG-----ATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTCC--AAATCATTGAA-A-TA--T-TTGT-TAGAT--ATTCCCT-TGT-TA--G-CCTCC-GA-C-GTCA-GTACA-AA-TGTCA-AT-GA---TTGTACAAACATGCTAGCCAA---GCGATGA-----TTCT---TAT--------T-----------AA-TA------------T-GTGC--A-TGCC-TGCA-TTTTTCTAA-A-TTT-TA-GCT-TTCCC-CC--TTTGGT-TCTC-CA-T-GCC--G-TGAGGC-T-AGCAAATGCCA-AAAA-C---GG-T-GCATTT-TTGA-TTGGAA-AAGGA-AAC-TTT-TTT-G-AAA-A-T-AA-TTACAA-TAAA---GTT-GTC--AACA-A-C--TT-CGGAAAA---GC-A-C-TTCTCAAT-TGTTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACC----ATG-T--TTC--ATATCCGT--GCCTT-TCGAAGCTG-AG--AAACTG--C-------ACTTTC---------TGTG--ATTT-CAAA-A-TTG--TTG-----------TAC-GTT-TATAATGCG-A-TTAA-----ATG-GGGC-T-CTCCGCCTAC--AAA-A-CTTA-ATTGCTA-AA---T-GAA-CTCCG-AA-T-A-T-TTTACCAGTTGACAT--GAAAGTTAGCTTT-C-TT------AA-AAA-A--T--CG-A-CC-ACGG-AGAGAAT-GCAAAATGC---GATGCGGCGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAATTTTT-AAAT-A---TA--T-TT-TC-CA-TT-AATTCGCTTT-ACGT-AAGAACCGAT------A-T-TCCG---AA-TGAAGA--TGGC--GCATGCAAAA--T-T-AG-C-T-A-AA-T---G--T--AAAAA--TTC-TCCA
gi|4 : TATG-GAGAACATTTCTGTACCACTT-TATTCAT--GA-CTT-AGTG-CC---AGC-TGA-TCT-AAAAGGGT-TAGGACATAA-TC-ATTAAG-CATG-TAAAC-TTTTCCGAAATCAT-AAACA-TACCT-TTTG-TAGATCTAT-CCCTATGT-TA--GGCCTCCTGA-C-GTCTTGTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G---TGGCAT--TC-----TAT--------T-----------TA-TA------------TAGTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTTCTA-GTT-T--CC-CCC-TTTGGTGTACC-AA-TTGCC--GGTGAG-C-T-AG-AAATGCCA-AAAAAC---GGGT-G-ATTT-T-G--TTTGAA-AAGGA-A-C-TTTGCTT-G-AAA-A-T-AACTT-GAA-TAAAC--GTT-GTC--ATAATA-T--TC-CGGAAAA----CCAGC-TTCTCA---T-ATCCGTTT--CCAGCA-TGCTG-GAAA-TTA-GTGACCC---ATG-T--TTC--A-ATC-GTT-GCTTT-TCGAAG-TG-AG--AAAA---GC-------ACTTTC---------TG-G--ATTTTCAAAGA-TTGGTCTG-----------TACTGTT-TATAATG-G-A-T--------ATGCGGGC-T-CTC-GCTT-C--AAA-C-TTTA-ATTG-TA-AAATGTCGAA-CTCCGTAA-T-A-T-TTTACCAGT-G-CATTG-AAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATGCT--AATGC--TGG--AA----AC-G-TGTAT-TT-ATGCAAAGTGAGGTCAGA---TAC--AA-TG-TAA-ATTT-AAAT-GATTTT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGA-CGAT------ATT-TTCG-C-AA-TCAAGAATTGGC-GGCA-GC-AAA--TAT-AG-C-T---AA-T--GGCTT--AAAAt
gi|5 : aTAGG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---AGG-TGA-TCT-AAAAA--T-TATGA-ATAT-TC-ATTAAG-CATA-TAA-C-TTTTCCGAAATCAT-AAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCTCCTGA-C-GTCA-GTGCA-TA-TGTCA-AT-GA---T-----------G-TAGC-AC---A-CATGACAT--TTCT----AT--------T-----------TA-TAAAATGAATTGCAT-GTGT--A-TGAT-TGCA-TTTT-CTAC-AGTCT-TA-ATT-T--TTATC--GTCGGTGTCCC-AA-T-GCC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---GG-T-G-AGTT-T-GA-TTTGAA-AACGG-A-C-TTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AATATA-T--TC-CGGAAAA----CCA-T-TTCTCAAA-T-GTTCGTTT--CTG--A-TGCTG-GAA--TTA-GTGATCC---TTG-T--TAC--ATGTCCGTT-GCTTT-TCGAAG-TA-A---AAAG-GTGC-------AATTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATG-G-A-TTAA-----ATG-GGTC-T-CTCCGCCT-C--AAA-AATTTA-ACTG-GA-AA---TGGAA-CTCTG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CATT---G--AA-AAG-A--TG-TG-A-TC-ATGG-AGA--AT-G-------C---GATGC--TGG--AATTAAAC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AATTG-TAA-TTCT-AAAT-A---TC--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACAGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAT--T-T-AG-C-C-A-AA-T--GG--T--AAAAT-TTTC-ACCA
gi|6 : aTATG-GAGAA-ATT-CT-TACCACTT--ATT-AT--GAGCTT-AGTA-CC---A-G-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTTCCGAATCAT-GAA---TA--T-TTTG-TAGAT--AT-CT-T-TGT-TA--GGCCTCCTGAAC-GTCA-GTACA-AA-T-TCA-AT-GAATAT-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-GTGC--AGTGGC-TGCA-TTTT-CTAA-GTCTT-TATGTT-T--CC-CCA-TTTGGTGTCCC-AACT-GCC--GTTGAGGC-T-AG-AAATGCCA-AAAC-G---G--TGG-ATTT-T-GA-TTTGAA-AAGG--A-C-TTT-CTT-G-AAA-AATAAA-TT-CAA-TAAA---GTT-GTC--AACATA-T--TC---GGAAA---ACCA-CTTTCTCAA--T-TTCCGTTT--CCGA-A-TGCTG-GAA--TTA-GTGACCC---ATT-TTGTTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AA---GTGC-------ACTTTC---------TGTG--ATTTTCAAAGATTTG--TTG-----------TACTGTT-TATAATG-G-A--TAA-----AT--GGGC-T-CTCTGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TGGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-GAAAGTT-G-TTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA--TTT-AAAT-A---TT--A-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAAA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|7 : aTATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAT-TC-ATATAG-CATG-CAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAAGG-CCTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATTACAT--TTC----TAT--------TGATAAAATGAATA-CA------------T-GTGC--C-TGAC-TGTA-ATTT-CTAA-AGTTT-TA-ATT-TTCCT-CC--CTTGGTGTCCC-AA-T-GCC--G-TGATGCTT-AG-AAATGCCA-AAAA-CA--G--T-T-ATTT-T-GA-TTTGAA-AACGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AACATA-T--TC-CGG-AAA---ACCA-C-TTCTTCATAT-TTCCGTTT--CCG--ATTGCTG-GAA--TTA-GTGACCC---TTG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AA--AAA--GTGC-------ACTTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AACTGTT-TA-AATG-G-A-TTAA-----ATA-GGGCTT-CTCCGCTT-C--AAA-T-TTTA-ATTG-TT-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGCTG--------------------CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-T--AAATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AAATG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-TATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|8 : aTATG-GAGAA-ATT-CT-TACCACTT--ATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAC--AT-CCCT-TGT-TA--G-CCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TG-A-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTTGGTGTCCC-AA-T-GC---G-TTAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-GA-TT-CAA-TAAA---GTT-GTC--AACATA-A--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGT--GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATT--CAGAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTAAAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTTAAAAG-A---TT--T-TTCTC-TATTT-AATTT-CTTT-ACGT-AATGA-CGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|9 : TTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-A-AA-TCCATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-AA--TATTTG-TAGAT--AT-CCCT-TTT-TA--GGCCTCCTGA-C-GTCA-GTACA-AAATGTCATATTGA---T-----------G-TAGC-AACCTG-GAGAACAT--TTCT----AT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAATAG-TT-TA-GTT-TC-CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AGAAAATGCCA-AAAA-CG--G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-CAA-TAAA---GTT-GTC--AAAATA-T--TC-CGG-AAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--TCG--A-T-TTG-GAA--TTA-GTTACCC---ATG-T--TTCATATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGT-TGC-------ACTTTC---------TGTG--ATTTTCAAA-A-TTG--TTG-----------TACTG-T-TATTATG-G-A-TTAA-----AT--GGGC-T-CTCCGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-A-TTTACCAGTTG-CATT-GAAAGTT-GTTAT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-TATAC--AATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-TGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAATTTTC-TCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): ACCAATCGCTAACTACTCGGCTATCTCCCGGTAACGTGAAATTTGAACGAGCAGGAT
Alignments
lowQualScore : 11111111111 11111 11111111111111111111 222222222222 11 11 22222222 1111 1111 2222 1111111 111111111 11 11111111111 1111 11 111111 111 111111
lowQualScore : 3 3 3 3 3 44 3 3 888 0 3 3 3 77 3 3 33 3 3 3 3 3 1 3 777 44 3 3 77 3 1 3 3 3 6 1 2 2 5 2 2 5 5 444 22222222222 2 5 444444 33 88888 55555555555555555555 2 666666666666 2 33 2 2 2 2 2 5 5 2 22 2 44 6 2 2 2 33 5 5 2 5 2 77777777 5 2 2 5 2 2 33 2 2 2 2 2 2 2 5 8 2 1111 2 66 33 2 33 2 0 8888 2 2 66 2 66 66 2 2 66 2 555 2 66 33 2 2 2 2 33 1111 0000000 222222222 44 0 6 00 44444444444 3 3 3 3 77777 3 3 3 2 3333 666 2 5 2 555 3 2 2 2 2 2 5 2 88 2 6 99 000000 2 2 33 2 2 2 2 2 77 2 555 777 33 33 5555 2 5 2 2 6666 44 2 33 5 2 2 2 000 33 2 2 2 2 2 2 2 111111 2 2 2 2 2 33 0 2 5 33 2 2 2 2 2 2 2 33 33 66 3 3
lowQualScore : . . . . . .. . . ... . . . . .. . . .. . . . . . . . ... .. . . .. . . . . . . . . . . . . . . ... ........... . . ...... .. ..... .................... . ............ . .. . . . . . . . . .. . .. . . . . .. . . . . . ........ . . . . . . .. . . . . . . . . . . .... . .. .. . .. . . .... . . .. . .. .. . . .. . ... . .. .. . . . . .. .... ....... ......... .. . . .. ........... . . . . ..... . . . . .... ... . . . ... . . . . . . . . .. . . .. ...... . . .. . . . . . .. . ... ... .. .. .... . . . . .... .. . .. . . . . ... .. . . . . . . . ...... . . . . . .. . . . .. . . . . . . . .. .. .. . .
lowQualScore : 6 6 6 6 6 22 1 1 555 8 1 1 1 33 1 1 88 1 1 1 1 1 5 1 777 22 1 1 33 1 5 1 1 1 2 5 9 9 7 9 9 7 7 777 77777777777 7 3 999999 77 77777 11111111111111111111 7 333333333333 7 99 9 9 9 9 9 7 3 7 77 7 33 9 7 7 7 77 3 3 7 3 7 33333333 7 9 9 7 9 9 66 9 9 9 9 9 9 9 7 6 9 2222 9 88 99 9 99 9 8 1111 9 9 66 9 88 88 9 9 88 9 000 9 88 99 9 9 7 7 99 2222 0000000 333333333 22 5 2 44 66666666666 1 1 1 1 77777 1 1 1 8 6666 222 9 7 9 000 0 9 9 9 9 9 7 9 55 9 0 66 777777 9 9 99 9 9 9 9 9 99 9 444 999 77 77 7777 9 7 9 9 1111 88 9 99 7 9 9 9 777 99 9 9 9 9 9 9 9 111111 9 9 9 9 9 99 7 9 7 99 9 9 9 9 9 9 9 99 99 88 1 1
consensus : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
Reference ( family-7110 ) : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|1 : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AATAACC---ACG-TGA-TCT-AAAAT--TCTATGA-ATAA-TC-ATTAAG--AT--TAA-C-TTTGCCGAAATCAT-GAA-A-TA--T-TTTG-TAGATT-AT-CC-T-TGT-T-A-G-CCTCCTGA-CCGTCAAGTACA-AA-TGTCATAT-G----T-----------G--AGC-AA---G-GATGACATCCTTCT----AT--------T-----------TA-TA------------T-GT-C--A-TGGC-TGCA-TTTT-CTAA-AGTAT-TA-GTT-T--CC-CT--TT-GGTGTCCC-AA-T-GCC--G-TGAGGCGT-AG-AGTCGC---AAAA-C---G--TTG-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TTTC-AATAAATCAGTT-ATCGCAAC--ATA-TATTC-CGGAAAA----CCA-T-TTCTCATC-T-TTCCGTTT--CCG--A-TGCTGCGAAATTCA-GTGACCCGGCATG-T--TTC--ATATCCGTT-GCTTTGTCGAAG-TG-AG--AA-GTGCACTTCTGTGATTTTCAAAGATTGTTGTACTGTTTATAATGA-TTA--ATGGGGCTCTCTGCTATTGTTCTACAACG-TCA-CTAATTTGTGTG-AACC-T-TTCCGT----------C-TT---ATTG-TA-AT---TTGT--CTCCG-A--T-A-T-TTTACCAGTTG-CATTCGGAATAT-G-TTT-CATT---T--GA-AAA-T--TG-CGAA-CC-ATGG-AGA--AT-A--AAATGC---GATGC--TGG--AA----AC-GTTGTAT-TT-ATGCA----GAGGTCAGA-T-TACATAATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTCTTA-TT-AATTT-CTTT-ACGT-AATGACCGATA-----A-A-TTCG-C-AA-TCAA-A--TGGC--GCATGCAAAA--T-T-AG-CTT-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|10 : AT--GAGCTT-AGT--CCGTGACG-TGAATCT-AAAA---C-TATGA-ATAAATC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-AGTA--T-TTTG-TAGAT--AT-CGCT--GT-----GGCCTCCTGA-C-GTCA-GCACA-AA-TGTCA-AT-GA---T-------------TAGC-AA---G-GATGACAT--TTCT----AT--------T------------A-TA------------T-GTGC--A-TGGC-TGCAATTTT-CTAA-AGTTT-TA-GTT-T--CC-CCCTTTGGGTGTCCCGAA-T-GCC--G-TGAGGC-T-GA-AAATGCCA-AAAAAC---GG-T-G-ATTT-T-GAATTTGAA-AAGGA-A-C-TTT-CTA-G-AAA-AAT-AAATT-C-AATAAA---GTTTGTCC-AAC--ATAAT--TC-CGGAAAA----CC--C-TTCTTCAT-T-TTCCGTTTTGCCG--A-TGCTG---A--TTA-GTGACCA---ATG-T--TTC--ATATCCGTT-G-TTT-TCGAAG-TG-AG--AAAGT---C-------ACTTTC---------TGTG--ATTTTCAAAGA-TTGT-TTG-----------TACTG-T-TATAATG-G-A-TTAA-----ATG-GGGC-TCCTCCGCTTAA--AAA-T-TTTA-ATTG-TA-AA---TTGAA-CTCCG-AA-T-A-T-TTTAC--ATTG-CATTGAACAGTT-G-TTT-CATT---GAAAA-AAA-A--TG-CG-A-CCGATGG-AGA--AT-G--AAATGC---GATGC--TGGACAA----AC-G--GTAT-TT-ATGCA----GA-GTCAGA-T-TAC--AATTG-TAA-TTTA-AAATAA---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGTAAATGACCGAT------A-A-TTCG-CAAA-TCAAGA--TGGC-GGCATGC-AAATTT-T-AG-C-TAA-AA-T--GG--T--AAAAA-TTTC-
gi|11 : ATG-G-GAA-ATC-TT-AACCACTT-TAT-CAT--GAGCTT-AGTA-CG---ATG-TGA-TCT-AAAGG--T-AATGA-ATAA-TC-AATAAGTCATGCTAA-C-TTTTCC-AAATCAT-GAAGA-TA--T-TTTG-TATAT--AT-CCCT-TGTCT-A-GGCCTCC-GA---GTCA-GTACAGAA-TGTCC-AT-GA---T-----------G----------------GACAA--TTTC---TAT--------T-----------TACTA------------T-GTGGGAA-TGGC-TGCA-TTTT-CTAC-CGTTT-TAAGTT-T--CC-CCC-TTTGGTG-CCC-AA-T-GCCCGA-TGAGGC-T-AG-AAATGCCA-AAAA-CCA-A--T-G-ATTT-TTGA-TT-GAACAAGGA-A-CCTTT-CTTTG-AAG-AAT-GA-TTTC-AATAA----GTT-GTC--AAC--ATA-T--TC-CGGAAAA----CCA-C-TTCTCAAT-T-T-CCGTT----CG--A-TGCTG-GAA--TTA-GTTACCC---ATG-T--TTC--ATA-CCGTTTGCTT---CGAAG-TG-AG--AAAGTG--C-------ACTTTC---------TGTG--ATTTTCAA-GA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTC---------AAA-A-CTTA-ATTG-TA-AA---TCGAA-CTC-G-AA-TCA-T-TTTACCAGTTG-CATTG-AAAGTT-GTTTTTCATTCATG--AATAAATA--TG-CG-AACC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAG-----------------A-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGTATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTA-TCCA
gi|12 : tgTG-GAGAA-ATT-CT-TAC-ACTT-TATTCAG--GAGCTT-AGTA-C----ACG-TGA-TCT-AAAAG--T-TATGA-ATAA--C-ATTAAG-CATG-TAA-C-TTTTC-GAAATCAT-GAA-A-TA--T-TT-G-TAGAT--AT-CC-T-TGT-T-A-GGCCTC-TGA---GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TT-----TAT--------T-----------TA-TA------------T-GTGC--A-TG-C-TGCA-TTTC-TAAA-AGTTT-TA-GTT-T--CC-TT--TT-GGTGTCCC-AA-T-GAC--G-TGAGGC-TGAG-AAATGC---AAAA-C---GG-T-G-ATTT-T-GA-TTTGAA-AAAGC-G-C-TT--CTT-G-TAA-AAT-A--TT-C-A-TAA----GTT-GTC--AAC--ATA-T---C-CGGAAAA-----CA-A-TTCTCAAT-T-TTCCGTTT--C-G--A-TGCTG-GAA--TTA-GTGACCT---ATG-T--TTC--ATATC-GTT-GCTTT-TCG--G-TG-AG--AAAGTG--C-------ACT-------------GTG--ATTTTCAA-TA-TTGG-TTG-----------TACTGTT-----------A-T--A-----ATG-GGGC-T-CTC-GCTT-C--AAAAC-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA---A-T-TTTACCAGTTG-CATTG-AAAGTT-GTTT--CATT-------A-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----ACTG-T-TAT-TTTATGCA----GAGGTCAGAAT-TAC--AATTG-TAA-TTTT--AAT-A---TT--T-TTCTC-TA-TTAAATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC--AA--T-T-AG-C-T-A-AA-C--GG--T--AAAAA-TTTC-TCC
gi|13 : tac-GAGAG--TT-CT-TACCACTT-TAT-CATACGAGCTT-AGTA-CCC--ACG-TGC-TCT-AAAAG--T-TATGA-ATA--TC-AT-AAG-CATG-TAA-CACTTT------TCAC-G-----------TTTGATAGAT--AT-TCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-ATCGA---T-----------G-TAGCAAA---G-GATGA-AT--TTCT---AAT--------A-----------TA-TA------------T-GTGC--A-TGGCATGCA-TTTT-CTAA-AGTTTATA-TTT-C--CC-CC--TTTGGTGTCCC-AA---GCC--G-TGAGG--T-AG-AAATGCCACAAAA-TACGG--T-G-ATTTAT-GA-TTTGAA-AGGGACA-C-TTT-CTT-GTAAATAAT-AA-TT-CAAATGA-----TT-GTC--AACATATA-T--TC-ACGAAAA---ACCA-C-TTCTCAA--T-TTCCGTTTG-CCG--A-TGCTG-GAA--TTATGTGACCC---ATG-TC-TTC--AT-TCCGTT-GCTTT-C---AG-TGCAG--AA
gi|14 : aTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGGCAT--TTCT----AT--------T-----------TA-TACAAAGAATACA-T-GTGC--A-TGAC-TGCA-TTTT-CTAA-AGTTT-TA-ATTAT--CC-TC--ATCGGTGTCCC-AA-T-GTC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---G--T-G-ATTT-T-GA-TTTGAA-AAAG-------TT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CAAAAAAAAAACCA-C-TTCTCAGT-T-CTCTGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---GTGTT--TTT--ATATCCGTT-GCTTT-GCAAAG-TG-
gi|15 : GCTT-CCAAAA-C-TTTA-ATTG-GACAA---TGGAAACTCCG-AAAT-A-TATGTACCAGTTG-CATTGCAAAGTT-GTTT--CATT---G--GA-AAA-AGATAACG-A-CC-ATGGGAGACAAT-G--AAATGCCGCGATGC--TGA--AA----AC-G-TGTAT-TT-TTGCA----GAGGTCAGT-T-TAC--AATTGCTAA-ATTG-AAAT-A---TT--TATTCTC-T------ATTT-CTTT-ACTA-AATGACAGAT------A-ATTTCGCC-AA-TCAAGA--T-GC-GGCATGC-AAA--T-TCAG-C-C-A-AAGT--GG--TA-AAAAA-TTTC-TCCA
gi|16 : G-TG-AAGCAAAGT---C-------ACTTTC---------TGTA----TTTCAAAGAATTG--TTG-----------TACGGTT-TATAATG-G-AATTAA-----ATG-GG-C-T-CTCCGCTT-CA-AAA-C-TTTAGATTGTTA-AA---TCG-A-CTCCT-AA-T-AGTATTTACCAGTTG-CATTGAACAGTT-TGTTT-CATTA--G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--ATGG--AAATGC---GATG---TGG--AA----At
gi|17 : GC--TGG--AA-----C-GATGTATCTT-ATGCA----GAGGTCAGA-T-TAC--AATTGGTAA-TTTT-AAAT-A---TTCCT-TTCTC-TA-TT-AATTT-CTTTCACGT-AATGACCGAT------A-A-TTCG-C-AATTCAAGA--TGGC-GCAATGC-AAA--T-T-AGAC-T-A-AA-T--GG--TTAAAAAA-TTTC-TCC
gi|19 : attgA---T-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-G
gi|2 : cactgaatctgtacgggccacATG-GAGGG-ATT-CT-TACCACTT-TATTCAT--GAACTT-AGTA-TG---AGG-TGA-TCT-AAAAAC-T-TATGA-ATAT-TC-ATTAAG-CACG-TAA-C-TTTTCGGAAATCAT-AAA-C-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-AAGGCCCCCTGA-C-GTTA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGACCT--TTCTATTTATAAAATGAAT-----------TA-CA------------T-GTGC--A-TGGT-TGCA-TTTT-CTAA-TGTCT-TA-ATT-TT-CC-CC--CTCGGTGTCCC-AA-T-GCT--G-CGAAGC-A-AG-AAATGCCA-AAAC-G---G--T-G-ATTT-T-GA-TTTAAA-AACGA-A-C-GTT-CTT-G-AAA-AAT-AA-TT-C-AATAAT---GTT-GTC--AAC--ATA-T--TCACG--AAA---ACCA-C-TTCTCAAC-T-TTCCTTTT--CCG--A-TG-----AA--TTA-GTGACCC---TTG-T--TAC--ATATCCGTT-GCTTT-TCGAAG-TG-AT--AAAGTG--C-------AATTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATT-G-A-TTAA-----ATG-AGGC-T-CTCCGCTT-C--AAAAC-TTTA-ATTG-GA-AA---TGGAA-CTCCG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CTTT---G--AC-AAG-A--TA-CG-A-TC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AG----AC-G-TTTAT-TT-ATGCA----GAGGCCAGT-T-TAA--AGTTG-CAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACAGATCTGAGGA-G-TTCG-C-AA-TCAAGA--TGGCAGGCCTGC-AAA--T-T-AG-C-C-ACAA-TTCGG--T--AAACA-TTTCGTCCA
gi|20 : A-GTT-T--CC-CCC-TTTGGTGTACC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAA
gi|3 : TATGCGAGAA-ATT----TACCACTTATATTCAT--GAGCTTCAGTA-CC---ACGCTGA-TCTTAAAAG-----ATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTCC--AAATCATTGAA-A-TA--T-TTGT-TAGAT--ATTCCCT-TGT-T-A-G-CCTCC-GA-C-GTCA-GTACA-AA-TGTCA-AT-GA---TTGTACAAACATGCTAGCCAA---GCGATGA-----TTCT---TAT--------T-----------AA-TA------------T-GTGC--A-TGCC-TGCA-TTTTTCTAA-A-TTT-TA-GCT-TTCCC-CC--TTTGGT-TCTC-CA-T-GCC--G-TGAGGC-T-AGCAAATGCCA-AAAA-C---GG-T-GCATTT-TTGA-TTGGAA-AAGGA-AAC-TTT-TTT-G-AAA-A-T-AA-TTAC-AATAAA---GTT-GTC--AAC--A-A-C--TT-CGGAAAA---GC-A-C-TTCTCAAT-TGTTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACC----ATG-T--TTC--ATATCCGT--GCCTT-TCGAAGCTG-AG--AAACTG--C-------ACTTTC---------TGTG--ATTT-CAAA-A-TTG--TTG-----------TAC-GTT-TATAATGCG-A-TTAA-----ATG-GGGC-T-CTCCGCCTAC--AAA-A-CTTA-ATTGCTA-AA---T-GAA-CTCCG-AA-T-A-T-TTTACCAGTTGACAT--GAAAGTTAGCTTT-C-TT------AA-AAA-A--T--CG-A-CC-ACGG-AGAGAAT-GCAAAATGC---GATGCGGCGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAATTTTT-AAAT-A---TA--T-TT-TC-CA-TT-AATTCGCTTT-ACGT-AAGAACCGAT------A-T-TCCG---AA-TGAAGA--TGGC--GCATGCAAAA--T-T-AG-C-T-A-AA-T---G--T--AAAAA--TTC-TCCA
gi|4 : TATG-GAGAACATTTCTGTACCACTT-TATTCAT--GA-CTT-AGTG-CC---AGC-TGA-TCT-AAAAGGGT-TAGGACATAA-TC-ATTAAG-CATG-TAAAC-TTTTCCGAAATCAT-AAACA-TACCT-TTTG-TAGATCTAT-CCCTATGT-T-A-GGCCTCCTGA-C-GTCTTGTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G---TGGCAT--TC-----TAT--------T-----------TA-TA------------TAGTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTTCTA-GTT-T--CC-CCC-TTTGGTGTACC-AA-TTGCC--GGTGAG-C-T-AG-AAATGCCA-AAAAAC---GGGT-G-ATTT-T-G--TTTGAA-AAGGA-A-C-TTTGCTT-G-AAA-A-T-AACTT-G-AATAAAC--GTT-GTC--ATA--ATA-T--TC-CGGAAAA----CCAGC-TTCTCA---T-ATCCGTTT--CCAGCA-TGCTG-GAAA-TTA-GTGACCC---ATG-T--TTC--A-ATC-GTT-GCTTT-TCGAAG-TG-AG--AAAA---GC-------ACTTTC---------TG-G--ATTTTCAAAGA-TTGGTCTG-----------TACTGTT-TATAATG-G-A-T--------ATGCGGGC-T-CTC-GCTT-C--AAA-C-TTTA-ATTG-TA-AAATGTCGAA-CTCCGTAA-T-A-T-TTTACCAGT-G-CATTG-AAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATGCT--AATGC--TGG--AA----AC-G-TGTAT-TT-ATGCAAAGTGAGGTCAGA---TAC--AA-TG-TAA-ATTT-AAAT-GATTTT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGA-CGAT------ATT-TTCG-C-AA-TCAAGAATTGGC-GGCA-GC-AAA--TAT-AG-C-T---AA-T--GGCTT--AAAAt
gi|5 : aTAGG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---AGG-TGA-TCT-AAAAA--T-TATGA-ATAT-TC-ATTAAG-CATA-TAA-C-TTTTCCGAAATCAT-AAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-AAGGCCTCCTGA-C-GTCA-GTGCA-TA-TGTCA-AT-GA---T-----------G-TAGC-AC---A-CATGACAT--TTCT----AT--------T-----------TA-TAAAATGAATTGCAT-GTGT--A-TGAT-TGCA-TTTT-CTAC-AGTCT-TA-ATT-T--TTATC--GTCGGTGTCCC-AA-T-GCC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---GG-T-G-AGTT-T-GA-TTTGAA-AACGG-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAT--ATA-T--TC-CGGAAAA----CCA-T-TTCTCAAA-T-GTTCGTTT--CTG--A-TGCTG-GAA--TTA-GTGATCC---TTG-T--TAC--ATGTCCGTT-GCTTT-TCGAAG-TA-A---AAAG-GTGC-------AATTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATG-G-A-TTAA-----ATG-GGTC-T-CTCCGCCT-C--AAA-AATTTA-ACTG-GA-AA---TGGAA-CTCTG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CATT---G--AA-AAG-A--TG-TG-A-TC-ATGG-AGA--AT-G-------C---GATGC--TGG--AATTAAAC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AATTG-TAA-TTCT-AAAT-A---TC--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACAGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAT--T-T-AG-C-C-A-AA-T--GG--T--AAAAT-TTTC-ACCA
gi|6 : aTATG-GAGAA-ATT-CT-TACCACTT--ATT-AT--GAGCTT-AGTA-CC---A-G-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTTCCGAATCAT-GAA---TA--T-TTTG-TAGAT--AT-CT-T-TGT-T-A-GGCCTCCTGAAC-GTCA-GTACA-AA-T-TCA-AT-GAATAT-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-GTGC--AGTGGC-TGCA-TTTT-CTAA-GTCTT-TATGTT-T--CC-CCA-TTTGGTGTCCC-AACT-GCC--GTTGAGGC-T-AG-AAATGCCA-AAAC-G---G--TGG-ATTT-T-GA-TTTGAA-AAGG--A-C-TTT-CTT-G-AAA-AATAAA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC---GGAAA---ACCA-CTTTCTCAA--T-TTCCGTTT--CCGA-A-TGCTG-GAA--TTA-GTGACCC---ATT-TTGTTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AA---GTGC-------ACTTTC---------TGTG--ATTTTCAAAGATTTG--TTG-----------TACTGTT-TATAATG-G-A--TAA-----AT--GGGC-T-CTCTGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TGGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-GAAAGTT-G-TTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA--TTT-AAAT-A---TT--A-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAAA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|7 : aTATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAT-TC-ATATAG-CATG-CAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAA-GGCCTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATTACAT--TTC----TAT--------TGATAAAATGAATA-CA------------T-GTGC--C-TGAC-TGTA-ATTT-CTAA-AGTTT-TA-ATT-TTCCT-CC--CTTGGTGTCCC-AA-T-GCC--G-TGATGCTT-AG-AAATGCCA-AAAA-CA--G--T-T-ATTT-T-GA-TTTGAA-AACGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGG-AAA---ACCA-C-TTCTTCATAT-TTCCGTTT--CCG--ATTGCTG-GAA--TTA-GTGACCC---TTG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AA--AAA--GTGC-------ACTTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AACTGTT-TA-AATG-G-A-TTAA-----ATA-GGGCTT-CTCCGCTT-C--AAA-T-TTTA-ATTG-TT-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGCTG--------------------CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-T--AAATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AAATG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-TATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|8 : aTATG-GAGAA-ATT-CT-TACCACTT--ATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAC--AT-CCCT-TGT-T-A-G-CCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TG-A-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTTGGTGTCCC-AA-T-GC---G-TTAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-GA-TT-C-AATAAA---GTT-GTC--AAC--ATA-A--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGT--GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATT--CAGAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTAAAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTTAAAAG-A---TT--T-TTCTC-TATTT-AATTT-CTTT-ACGT-AATGA-CGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|9 : TTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-A-AA-TCCATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-AA--TATTTG-TAGAT--AT-CCCT-TTT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AAATGTCATATTGA---T-----------G-TAGC-AACCTG-GAGAACAT--TTCT----AT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAATAG-TT-TA-GTT-TC-CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AGAAAATGCCA-AAAA-CG--G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAA--ATA-T--TC-CGG-AAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--TCG--A-T-TTG-GAA--TTA-GTTACCC---ATG-T--TTCATATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGT-TGC-------ACTTTC---------TGTG--ATTTTCAAA-A-TTG--TTG-----------TACTG-T-TATTATG-G-A-TTAA-----AT--GGGC-T-CTCCGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-A-TTTACCAGTTG-CATT-GAAAGTT-GTTAT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-TATAC--AATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-TGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAATTTTC-TCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): ACCAATCGCTAACTACTCGGCTATCTCCCGGTAACGTGAAATTTGAACGAGCAGGAT
Alignments
lowQualScore : 11111111111 11111 11111111111111111111 222222222222 11 11 22222222 1111 1111 2222 1111111 111111111 11 11111111111 1111 11 111111 111 111111
lowQualScore : 3 3 3 3 3 44 3 3 888 0 3 3 3 77 3 3 33 3 3 3 3 3 1 3 777 44 3 3 77 3 1 3 3 3 6 1 2 2 5 2 2 5 5 444 22222222222 2 5 444444 33 88888 55555555555555555555 2 666666666666 2 33 2 2 2 2 2 5 5 2 22 2 44 6 2 2 2 33 5 5 2 5 2 77777777 5 2 2 5 2 2 33 2 2 2 2 2 2 2 5 8 2 1111 2 66 33 2 33 2 0 8888 2 2 66 2 66 66 2 2 66 2 555 2 66 33 2 2 2 2 33 1111 0000000 222222222 44 0 6 00 44444444444 3 3 3 3 77777 3 3 3 2 3333 666 2 5 2 555 3 2 2 2 2 2 5 2 88 2 6 99 000000 2 2 33 2 2 2 2 2 77 2 555 777 33 33 5555 2 5 2 2 6666 44 2 33 5 2 2 2 000 33 2 2 2 2 2 2 2 111111 2 2 2 2 2 33 0 2 5 33 2 2 2 2 2 2 2 33 33 66 3 3
lowQualScore : . . . . . .. . . ... . . . . .. . . .. . . . . . . . ... .. . . .. . . . . . . . . . . . . . . ... ........... . . ...... .. ..... .................... . ............ . .. . . . . . . . . .. . .. . . . . .. . . . . . ........ . . . . . . .. . . . . . . . . . . .... . .. .. . .. . . .... . . .. . .. .. . . .. . ... . .. .. . . . . .. .... ....... ......... .. . . .. ........... . . . . ..... . . . . .... ... . . . ... . . . . . . . . .. . . .. ...... . . .. . . . . . .. . ... ... .. .. .... . . . . .... .. . .. . . . . ... .. . . . . . . . ...... . . . . . .. . . . .. . . . . . . . .. .. .. . .
lowQualScore : 6 6 6 6 6 22 1 1 555 8 1 1 1 33 1 1 88 1 1 1 1 1 5 1 777 22 1 1 33 1 5 1 1 1 2 5 9 9 7 9 9 7 7 777 77777777777 7 3 999999 77 77777 11111111111111111111 7 333333333333 7 99 9 9 9 9 9 7 3 7 77 7 33 9 7 7 7 77 3 3 7 3 7 33333333 7 9 9 7 9 9 66 9 9 9 9 9 9 9 7 6 9 2222 9 88 99 9 99 9 8 1111 9 9 66 9 88 88 9 9 88 9 000 9 88 99 9 9 7 7 99 2222 0000000 333333333 22 5 2 44 66666666666 1 1 1 1 77777 1 1 1 8 6666 222 9 7 9 000 0 9 9 9 9 9 7 9 55 9 0 66 777777 9 9 99 9 9 9 9 9 99 9 444 999 77 77 7777 9 7 9 9 1111 88 9 99 7 9 9 9 777 99 9 9 9 9 9 9 9 111111 9 9 9 9 9 99 7 9 7 99 9 9 9 9 9 9 9 99 99 88 1 1
consensus : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
Reference ( family-7110 ) : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|1 : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AATAACC---ACG-TGA-TCT-AAAAT--TCTATGA-ATAA-TC-ATTAAG--AT--TAA-C-TTTGCCGAAATCAT-GAA-A-TA--T-TTTG-TAGATT-AT-CC-T-TGT-T-A-G-CCTCCTGA-CCGTCAAGTACA-AA-TGTCATAT-G----T-----------G--AGC-AA---G-GATGACATCCTTCT----AT--------T-----------TA-TA------------T-GT-C--A-TGGC-TGCA-TTTT-CTAA-AGTAT-TA-GTT-T--CC-CT--TT-GGTGTCCC-AA-T-GCC--G-TGAGGCGT-AG-AGTCGC---AAAA-C---G--TTG-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TTTC-AATAAATCAGTT-ATCGCAAC--ATA-TATTC-CGGAAAA----CCA-T-TTCTCATC-T-TTCCGTTT--CCG--A-TGCTGCGAAATTCA-GTGACCCGGCATG-T--TTC--ATATCCGTT-GCTTTGTCGAAG-TG-AG--AA-GTGCACTTCTGTGATTTTCAAAGATTGTTGTACTGTTTATAATGA-TTA--ATGGGGCTCTCTGCTATTGTTCTACAACG-TCA-CTAATTTGTGTG-AACC-T-TTCCGT----------C-TT---ATTG-TA-AT---TTGT--CTCCG-A--T-A-T-TTTACCAGTTG-CATTCGGAATAT-G-TTT-CATT---T--GA-AAA-T--TG-CGAA-CC-ATGG-AGA--AT-A--AAATGC---GATGC--TGG--AA----AC-GTTGTAT-TT-ATGCA----GAGGTCAGA-T-TACATAATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTCTTA-TT-AATTT-CTTT-ACGT-AATGACCGATA-----A-A-TTCG-C-AA-TCAA-A--TGGC--GCATGCAAAA--T-T-AG-CTT-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|10 : AT--GAGCTT-AGT--CCGTGACG-TGAATCT-AAAA---C-TATGA-ATAAATC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-AGTA--T-TTTG-TAGAT--AT-CGCT--GT-----GGCCTCCTGA-C-GTCA-GCACA-AA-TGTCA-AT-GA---T-------------TAGC-AA---G-GATGACAT--TTCT----AT--------T------------A-TA------------T-GTGC--A-TGGC-TGCAATTTT-CTAA-AGTTT-TA-GTT-T--CC-CCCTTTGGGTGTCCCGAA-T-GCC--G-TGAGGC-T-GA-AAATGCCA-AAAAAC---GG-T-G-ATTT-T-GAATTTGAA-AAGGA-A-C-TTT-CTA-G-AAA-AAT-AAATT-C-AATAAA---GTTTGTCC-AAC--ATAAT--TC-CGGAAAA----CC--C-TTCTTCAT-T-TTCCGTTTTGCCG--A-TGCTG---A--TTA-GTGACCA---ATG-T--TTC--ATATCCGTT-G-TTT-TCGAAG-TG-AG--AAAGT---C-------ACTTTC---------TGTG--ATTTTCAAAGA-TTGT-TTG-----------TACTG-T-TATAATG-G-A-TTAA-----ATG-GGGC-TCCTCCGCTTAA--AAA-T-TTTA-ATTG-TA-AA---TTGAA-CTCCG-AA-T-A-T-TTTAC--ATTG-CATTGAACAGTT-G-TTT-CATT---GAAAA-AAA-A--TG-CG-A-CCGATGG-AGA--AT-G--AAATGC---GATGC--TGGACAA----AC-G--GTAT-TT-ATGCA----GA-GTCAGA-T-TAC--AATTG-TAA-TTTA-AAATAA---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGTAAATGACCGAT------A-A-TTCG-CAAA-TCAAGA--TGGC-GGCATGC-AAATTT-T-AG-C-TAA-AA-T--GG--T--AAAAA-TTTC-
gi|11 : ATG-G-GAA-ATC-TT-AACCACTT-TAT-CAT--GAGCTT-AGTA-CG---ATG-TGA-TCT-AAAGG--T-AATGA-ATAA-TC-AATAAGTCATGCTAA-C-TTTTCC-AAATCAT-GAAGA-TA--T-TTTG-TATAT--AT-CCCT-TGTCT-A-GGCCTCC-GA---GTCA-GTACAGAA-TGTCC-AT-GA---T-----------G----------------GACAA--TTTC---TAT--------T-----------TACTA------------T-GTGGGAA-TGGC-TGCA-TTTT-CTAC-CGTTT-TAAGTT-T--CC-CCC-TTTGGTG-CCC-AA-T-GCCCGA-TGAGGC-T-AG-AAATGCCA-AAAA-CCA-A--T-G-ATTT-TTGA-TT-GAACAAGGA-A-CCTTT-CTTTG-AAG-AAT-GA-TTTC-AATAA----GTT-GTC--AAC--ATA-T--TC-CGGAAAA----CCA-C-TTCTCAAT-T-T-CCGTT----CG--A-TGCTG-GAA--TTA-GTTACCC---ATG-T--TTC--ATA-CCGTTTGCTT---CGAAG-TG-AG--AAAGTG--C-------ACTTTC---------TGTG--ATTTTCAA-GA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTC---------AAA-A-CTTA-ATTG-TA-AA---TCGAA-CTC-G-AA-TCA-T-TTTACCAGTTG-CATTG-AAAGTT-GTTTTTCATTCATG--AATAAATA--TG-CG-AACC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAG-----------------A-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGTATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTA-TCCA
gi|12 : tgTG-GAGAA-ATT-CT-TAC-ACTT-TATTCAG--GAGCTT-AGTA-C----ACG-TGA-TCT-AAAAG--T-TATGA-ATAA--C-ATTAAG-CATG-TAA-C-TTTTC-GAAATCAT-GAA-A-TA--T-TT-G-TAGAT--AT-CC-T-TGT-T-A-GGCCTC-TGA---GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TT-----TAT--------T-----------TA-TA------------T-GTGC--A-TG-C-TGCA-TTTC-TAAA-AGTTT-TA-GTT-T--CC-TT--TT-GGTGTCCC-AA-T-GAC--G-TGAGGC-TGAG-AAATGC---AAAA-C---GG-T-G-ATTT-T-GA-TTTGAA-AAAGC-G-C-TT--CTT-G-TAA-AAT-A--TT-C-A-TAA----GTT-GTC--AAC--ATA-T---C-CGGAAAA-----CA-A-TTCTCAAT-T-TTCCGTTT--C-G--A-TGCTG-GAA--TTA-GTGACCT---ATG-T--TTC--ATATC-GTT-GCTTT-TCG--G-TG-AG--AAAGTG--C-------ACT-------------GTG--ATTTTCAA-TA-TTGG-TTG-----------TACTGTT-----------A-T--A-----ATG-GGGC-T-CTC-GCTT-C--AAAAC-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA---A-T-TTTACCAGTTG-CATTG-AAAGTT-GTTT--CATT-------A-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----ACTG-T-TAT-TTTATGCA----GAGGTCAGAAT-TAC--AATTG-TAA-TTTT--AAT-A---TT--T-TTCTC-TA-TTAAATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC--AA--T-T-AG-C-T-A-AA-C--GG--T--AAAAA-TTTC-TCC
gi|13 : tac-GAGAG--TT-CT-TACCACTT-TAT-CATACGAGCTT-AGTA-CCC--ACG-TGC-TCT-AAAAG--T-TATGA-ATA--TC-AT-AAG-CATG-TAA-CACTTT------TCAC-G-----------TTTGATAGAT--AT-TCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-ATCGA---T-----------G-TAGCAAA---G-GATGA-AT--TTCT---AAT--------A-----------TA-TA------------T-GTGC--A-TGGCATGCA-TTTT-CTAA-AGTTTATA-TTT-C--CC-CC--TTTGGTGTCCC-AA---GCC--G-TGAGG--T-AG-AAATGCCACAAAA-TACGG--T-G-ATTTAT-GA-TTTGAA-AGGGACA-C-TTT-CTT-GTAAATAAT-AA-TT-CAAATGA-----TT-GTC--AACATATA-T--TC-ACGAAAA---ACCA-C-TTCTCAA--T-TTCCGTTTG-CCG--A-TGCTG-GAA--TTATGTGACCC---ATG-TC-TTC--AT-TCCGTT-GCTTT-C---AG-TGCAG--AA
gi|14 : aTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGGCAT--TTCT----AT--------T-----------TA-TACAAAGAATACA-T-GTGC--A-TGAC-TGCA-TTTT-CTAA-AGTTT-TA-ATTAT--CC-TC--ATCGGTGTCCC-AA-T-GTC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---G--T-G-ATTT-T-GA-TTTGAA-AAAG-------TT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CAAAAAAAAAACCA-C-TTCTCAGT-T-CTCTGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---GTGTT--TTT--ATATCCGTT-GCTTT-GCAAAG-TG-
gi|15 : GCTT-CCAAAA-C-TTTA-ATTG-GACAA---TGGAAACTCCG-AAAT-A-TATGTACCAGTTG-CATTGCAAAGTT-GTTT--CATT---G--GA-AAA-AGATAACG-A-CC-ATGGGAGACAAT-G--AAATGCCGCGATGC--TGA--AA----AC-G-TGTAT-TT-TTGCA----GAGGTCAGT-T-TAC--AATTGCTAA-ATTG-AAAT-A---TT--TATTCTC-T------ATTT-CTTT-ACTA-AATGACAGAT------A-ATTTCGCC-AA-TCAAGA--T-GC-GGCATGC-AAA--T-TCAG-C-C-A-AAGT--GG--TA-AAAAA-TTTC-TCCA
gi|16 : G-TG-AAGCAAAGT---C-------ACTTTC---------TGTA----TTTCAAAGAATTG--TTG-----------TACGGTT-TATAATG-G-AATTAA-----ATG-GG-C-T-CTCCGCTT-CA-AAA-C-TTTAGATTGTTA-AA---TCG-A-CTCCT-AA-T-AGTATTTACCAGTTG-CATTGAACAGTT-TGTTT-CATTA--G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--ATGG--AAATGC---GATG---TGG--AA----At
gi|17 : GC--TGG--AA-----C-GATGTATCTT-ATGCA----GAGGTCAGA-T-TAC--AATTGGTAA-TTTT-AAAT-A---TTCCT-TTCTC-TA-TT-AATTT-CTTTCACGT-AATGACCGAT------A-A-TTCG-C-AATTCAAGA--TGGC-GCAATGC-AAA--T-T-AGAC-T-A-AA-T--GG--TTAAAAAA-TTTC-TCC
gi|19 : attgA---T-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-G
gi|2 : cactgaatctgtacgggccacATG-GAGGG-ATT-CT-TACCACTT-TATTCAT--GAACTT-AGTA-TG---AGG-TGA-TCT-AAAAAC-T-TATGA-ATAT-TC-ATTAAG-CACG-TAA-C-TTTTCGGAAATCAT-AAA-C-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-AAGGCCCCCTGA-C-GTTA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATGACCT--TTCTATTTATAAAATGAAT-----------TA-CA------------T-GTGC--A-TGGT-TGCA-TTTT-CTAA-TGTCT-TA-ATT-TT-CC-CC--CTCGGTGTCCC-AA-T-GCT--G-CGAAGC-A-AG-AAATGCCA-AAAC-G---G--T-G-ATTT-T-GA-TTTAAA-AACGA-A-C-GTT-CTT-G-AAA-AAT-AA-TT-C-AATAAT---GTT-GTC--AAC--ATA-T--TCACG--AAA---ACCA-C-TTCTCAAC-T-TTCCTTTT--CCG--A-TG-----AA--TTA-GTGACCC---TTG-T--TAC--ATATCCGTT-GCTTT-TCGAAG-TG-AT--AAAGTG--C-------AATTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATT-G-A-TTAA-----ATG-AGGC-T-CTCCGCTT-C--AAAAC-TTTA-ATTG-GA-AA---TGGAA-CTCCG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CTTT---G--AC-AAG-A--TA-CG-A-TC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AG----AC-G-TTTAT-TT-ATGCA----GAGGCCAGT-T-TAA--AGTTG-CAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACAGATCTGAGGA-G-TTCG-C-AA-TCAAGA--TGGCAGGCCTGC-AAA--T-T-AG-C-C-ACAA-TTCGG--T--AAACA-TTTCGTCCA
gi|20 : A-GTT-T--CC-CCC-TTTGGTGTACC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAA
gi|3 : TATGCGAGAA-ATT----TACCACTTATATTCAT--GAGCTTCAGTA-CC---ACGCTGA-TCTTAAAAG-----ATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTCC--AAATCATTGAA-A-TA--T-TTGT-TAGAT--ATTCCCT-TGT-T-A-G-CCTCC-GA-C-GTCA-GTACA-AA-TGTCA-AT-GA---TTGTACAAACATGCTAGCCAA---GCGATGA-----TTCT---TAT--------T-----------AA-TA------------T-GTGC--A-TGCC-TGCA-TTTTTCTAA-A-TTT-TA-GCT-TTCCC-CC--TTTGGT-TCTC-CA-T-GCC--G-TGAGGC-T-AGCAAATGCCA-AAAA-C---GG-T-GCATTT-TTGA-TTGGAA-AAGGA-AAC-TTT-TTT-G-AAA-A-T-AA-TTAC-AATAAA---GTT-GTC--AAC--A-A-C--TT-CGGAAAA---GC-A-C-TTCTCAAT-TGTTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACC----ATG-T--TTC--ATATCCGT--GCCTT-TCGAAGCTG-AG--AAACTG--C-------ACTTTC---------TGTG--ATTT-CAAA-A-TTG--TTG-----------TAC-GTT-TATAATGCG-A-TTAA-----ATG-GGGC-T-CTCCGCCTAC--AAA-A-CTTA-ATTGCTA-AA---T-GAA-CTCCG-AA-T-A-T-TTTACCAGTTGACAT--GAAAGTTAGCTTT-C-TT------AA-AAA-A--T--CG-A-CC-ACGG-AGAGAAT-GCAAAATGC---GATGCGGCGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAATTTTT-AAAT-A---TA--T-TT-TC-CA-TT-AATTCGCTTT-ACGT-AAGAACCGAT------A-T-TCCG---AA-TGAAGA--TGGC--GCATGCAAAA--T-T-AG-C-T-A-AA-T---G--T--AAAAA--TTC-TCCA
gi|4 : TATG-GAGAACATTTCTGTACCACTT-TATTCAT--GA-CTT-AGTG-CC---AGC-TGA-TCT-AAAAGGGT-TAGGACATAA-TC-ATTAAG-CATG-TAAAC-TTTTCCGAAATCAT-AAACA-TACCT-TTTG-TAGATCTAT-CCCTATGT-T-A-GGCCTCCTGA-C-GTCTTGTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G---TGGCAT--TC-----TAT--------T-----------TA-TA------------TAGTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTTCTA-GTT-T--CC-CCC-TTTGGTGTACC-AA-TTGCC--GGTGAG-C-T-AG-AAATGCCA-AAAAAC---GGGT-G-ATTT-T-G--TTTGAA-AAGGA-A-C-TTTGCTT-G-AAA-A-T-AACTT-G-AATAAAC--GTT-GTC--ATA--ATA-T--TC-CGGAAAA----CCAGC-TTCTCA---T-ATCCGTTT--CCAGCA-TGCTG-GAAA-TTA-GTGACCC---ATG-T--TTC--A-ATC-GTT-GCTTT-TCGAAG-TG-AG--AAAA---GC-------ACTTTC---------TG-G--ATTTTCAAAGA-TTGGTCTG-----------TACTGTT-TATAATG-G-A-T--------ATGCGGGC-T-CTC-GCTT-C--AAA-C-TTTA-ATTG-TA-AAATGTCGAA-CTCCGTAA-T-A-T-TTTACCAGT-G-CATTG-AAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATGCT--AATGC--TGG--AA----AC-G-TGTAT-TT-ATGCAAAGTGAGGTCAGA---TAC--AA-TG-TAA-ATTT-AAAT-GATTTT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGA-CGAT------ATT-TTCG-C-AA-TCAAGAATTGGC-GGCA-GC-AAA--TAT-AG-C-T---AA-T--GGCTT--AAAAt
gi|5 : aTAGG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---AGG-TGA-TCT-AAAAA--T-TATGA-ATAT-TC-ATTAAG-CATA-TAA-C-TTTTCCGAAATCAT-AAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-AAGGCCTCCTGA-C-GTCA-GTGCA-TA-TGTCA-AT-GA---T-----------G-TAGC-AC---A-CATGACAT--TTCT----AT--------T-----------TA-TAAAATGAATTGCAT-GTGT--A-TGAT-TGCA-TTTT-CTAC-AGTCT-TA-ATT-T--TTATC--GTCGGTGTCCC-AA-T-GCC--G-TGAAGC-T-AG-AAATGCCA-AAAAAC---GG-T-G-AGTT-T-GA-TTTGAA-AACGG-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAT--ATA-T--TC-CGGAAAA----CCA-T-TTCTCAAA-T-GTTCGTTT--CTG--A-TGCTG-GAA--TTA-GTGATCC---TTG-T--TAC--ATGTCCGTT-GCTTT-TCGAAG-TA-A---AAAG-GTGC-------AATTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AAATGTT-TATAATG-G-A-TTAA-----ATG-GGTC-T-CTCCGCCT-C--AAA-AATTTA-ACTG-GA-AA---TGGAA-CTCTG-AA-T-A-T-TGTACCAGTTG-CATTG-AAAGTT-GTTT--CATT---G--AA-AAG-A--TG-TG-A-TC-ATGG-AGA--AT-G-------C---GATGC--TGG--AATTAAAC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AATTG-TAA-TTCT-AAAT-A---TC--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACAGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAT--T-T-AG-C-C-A-AA-T--GG--T--AAAAT-TTTC-ACCA
gi|6 : aTATG-GAGAA-ATT-CT-TACCACTT--ATT-AT--GAGCTT-AGTA-CC---A-G-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTTCCGAATCAT-GAA---TA--T-TTTG-TAGAT--AT-CT-T-TGT-T-A-GGCCTCCTGAAC-GTCA-GTACA-AA-T-TCA-AT-GAATAT-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-GTGC--AGTGGC-TGCA-TTTT-CTAA-GTCTT-TATGTT-T--CC-CCA-TTTGGTGTCCC-AACT-GCC--GTTGAGGC-T-AG-AAATGCCA-AAAC-G---G--TGG-ATTT-T-GA-TTTGAA-AAGG--A-C-TTT-CTT-G-AAA-AATAAA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC---GGAAA---ACCA-CTTTCTCAA--T-TTCCGTTT--CCGA-A-TGCTG-GAA--TTA-GTGACCC---ATT-TTGTTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AA---GTGC-------ACTTTC---------TGTG--ATTTTCAAAGATTTG--TTG-----------TACTGTT-TATAATG-G-A--TAA-----AT--GGGC-T-CTCTGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TGGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-GAAAGTT-G-TTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA--TTT-AAAT-A---TT--A-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAAA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|7 : aTATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-TC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAT-TC-ATATAG-CATG-CAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-TAA-GGCCTCCTGA-C-GTCA-GTACA-AG-TGTCA-AT-GA---T-----------G-TAGC-AA---A-CATTACAT--TTC----TAT--------TGATAAAATGAATA-CA------------T-GTGC--C-TGAC-TGTA-ATTT-CTAA-AGTTT-TA-ATT-TTCCT-CC--CTTGGTGTCCC-AA-T-GCC--G-TGATGCTT-AG-AAATGCCA-AAAA-CA--G--T-T-ATTT-T-GA-TTTGAA-AACGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGG-AAA---ACCA-C-TTCTTCATAT-TTCCGTTT--CCG--ATTGCTG-GAA--TTA-GTGACCC---TTG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AA--AAA--GTGC-------ACTTTT---------TGTG--ATTTTCAAAGA-TTG--TTG-----------AACTGTT-TA-AATG-G-A-TTAA-----ATA-GGGCTT-CTCCGCTT-C--AAA-T-TTTA-ATTG-TT-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGCTG--------------------CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-T--AAATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AAATG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-TATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|8 : aTATG-GAGAA-ATT-CT-TACCACTT--ATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAC--AT-CCCT-TGT-T-A-G-CCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TG-A-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTTGGTGTCCC-AA-T-GC---G-TTAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-GA-TT-C-AATAAA---GTT-GTC--AAC--ATA-A--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGT--GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATT--CAGAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTAAAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTTAAAAG-A---TT--T-TTCTC-TATTT-AATTT-CTTT-ACGT-AATGA-CGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|9 : TTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-A-AA-TCCATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-AA--TATTTG-TAGAT--AT-CCCT-TTT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AAATGTCATATTGA---T-----------G-TAGC-AACCTG-GAGAACAT--TTCT----AT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAATAG-TT-TA-GTT-TC-CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AGAAAATGCCA-AAAA-CG--G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAA--ATA-T--TC-CGG-AAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--TCG--A-T-TTG-GAA--TTA-GTTACCC---ATG-T--TTCATATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGT-TGC-------ACTTTC---------TGTG--ATTTTCAAA-A-TTG--TTG-----------TACTG-T-TATTATG-G-A-TTAA-----AT--GGGC-T-CTCCGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-A-TTTACCAGTTG-CATT-GAAAGTT-GTTAT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G---AATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-TATAC--AATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-TGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAATTTTC-TCC
blockSeqs : C C T G A AC C . GTG C A T GG . C AA C T C A A C T AG CC A A CT T C A C A A G A . T G A T C ATA TGTACAAACAT C A CCTGG . TATTT TGATAAAATGAA C AAATGAATTGCA A GA G A A T T A A A TC A CT G G C T CG G T G C C TACGG G C A T A C AC A C G T T T A A T A AC T C AT A . A AAAA G T TA G TG GC T . A T . T TG AT T . C C GC TGTG . . . A GT . . C . A . C T C C CCA AC G T C ATG T A T A C G A A GA A T TT CATG T T GA A . A G G CA G CAA CGC GG AC TTAA T A C T AAGT AA A . C T A A ATT CC A . T A G C A CTGAGG T T C A T AT A A TT A C A . A C G TC CT TA T G
blockSeqs : . . . . . . . . C . . . C . . A . . . . . C . GA . . . . . C . . . A G . . . . . . T . . . C GCG . CT AAAATGAAT . CAAAGAATACA . . . . . . . C T . TC . C T . . . . T . . A . ACGGG . . . T . . A . . . . . . . C A . A . . . . . . A . . T . G A . . . . . . C . . . . . . GTG . . . T T . . . . . . . . . C AA AC . C . . C . . . . . A . GC . T T GAA . . . . . . . . GA . A T . . . . . . . . A . . G . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . A . .
blockSeqs : . . . . . . . . . . . . . . . A . . . . . G . CA . . . . . C . . . . G . . . . . . . . . . . GG . TA T . . . . . . . . . . . . T . C T . . . . . . . . . ACGG . . . . . . A . . . . . . . . . . A . . . . . . A . . T . . . . . . . . . . . . . . . . GTG . . . . G . . . . . . . . . C CA AA . . . . C . . . . . . . GA . T T AG . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T . . . . . C . A . . . . . C . . . . G . . . . . . . . . . . GG . TT T . . . . . . . . . . . . C . C C . . . . . . . . . CCAA . . . . . . C . . . . . . . . . . T . . . . . . G . . T . . . . . . . . . . . . . . . . GTG . . . . . . . . . . . . . . C AC T . . . . G . . . . . . . AA . G T G . . . . . . . . . . A . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A . . . . . C . C . . . . . C . . . . G . . . . . . . . . . . GG . TT T . . . . . . . . . . . . . . A C . . . . . . . . . ACGG . . . . . . A . . . . . . . . . . A . . . . . . A . . T . . . . . . . . . . . . . . . . TTG . . . . . . . . . . . . . . C CA A . . . . C . . . . . . . G . T T G . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A . . . . . C . A . . . . . C . . . . G . . . . . . . . . . . AC . T A . . . . . . . . . . . . . . . T . . . . . . . . . CGG . . . . . . A . . . . . . . . . . A . . . . . . A . . C . . . . . . . . . . . . . . . . TG . . . . . . . . . . . . . . T CA C . . . . G . . . . . . . G . C T G . . . . . . . . . . A . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T . . . . . C . A . . . . . C . . . . G . . . . . . . . . . . GG . T T . . . . . . . . . . . . . . . T . . . . . . . . . ACG . . . . . . A . . . . . . . . . . A . . . . . . A . . T . . . . . . . . . . . . . . . . TG . . . . . . . . . . . . . . C C C . . . . C . . . . . . . G . T T G . . . . . . . . . . A . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A . . . . . C . A . . . . . C . . . . G . . . . . . . . . . . AC . T T . . . . . . . . . . . . . . . T . . . . . . . . . CGG . . . . . . G . . . . . . . . . . A . . . . . . A . . A . . . . . . . . . . . . . . . . TG . . . . . . . . . . . . . . C C A . . . . G . . . . . . . G . T T G . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T . . . . . C . A . . . . . C . . . . G . . . . . . . . . . . AC . T T . . . . . . . . . . . . . . . C . . . . . . . . . CAG . . . . . . A . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . TG . . . . . . . . . . . . . . C C C . . . . G . . . . . . . G . T . G . . . . . . . . . . A . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . A . . . . . . . A . . . . . C . . . . G . . . . . . . . . . . GG . T T . . . . . . . . . . . . . . . T . . . . . . . . . CGG . . . . . . A . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . C C . . . . C . . . . . . . G . T . G . . . . . . . . . . A . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AC . T T . . . . . . . . . . . . . . . T . . . . . . . . . GG . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . C T . . . . C . . . . . . . G . . . G . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GG . T T . . . . . . . . . . . . . . . T . . . . . . . . . GG . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . C C . . . . C . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . G . T T . . . . . . . . . . . . . . . C . . . . . . . . . CG . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . T T . . . . . . . . . . . . . . . . . . . . . . .
blockSeqCons : ** ** CGG***** A*** ** ** A*** ** *** TG** ******* ********* ** *********** ***** C*** G* ** *** ******
originalCons : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAA-C---G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAA---ACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTGTGC-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTGGAAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
finalCons : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGTA-CC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGAT--AT-CCCT-TGT-T-A-GGCCTCCTGA-C-GTCA-GTACA-AA-TGTCA-AT-GA---T-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-CC--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAATGCCA-AAAACGG-----T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAAA---GTT-GTC--AAC--ATA-T--TC-CGGAAAAA---CCA-C-TTCTCAAT-T-TTCCGTTT--CCG--A-TGCTG-GAA--TTA-GTGACCC---ATG-T--TTC--ATATCCGTT-GCTTT-TCGAAG-TG-AG--AAAGTG--C-------ACTTTC---------TGTG--ATTTTCAAAGA-TTG--TTG-----------TACTGTT-TATAATG-G-A-TTAA-----ATG-GGGC-T-CTCCGCTTC---AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTG-AAAGTT-GTTTT-CATT---G--AA-AAA-A--TG-CG-A-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): ACCAATCGCTAACTACTCGGCTATCTCCCGGTAACGTGAAATTTGAACGAGCAGGAT
Alignments
lowQualScore : 11111111111 11111 11111111111111111111 222222222222 11 11111 1 11 11 111111 111 111111
lowQualScore : 3 3 3 3 3 44 3 3 888 0 3 3 3 77 3 3 33 3 3 3 3 3 1 3 6 3 44 3 3 3 44 3 3 3 9 2 2 2 2 2 2 5 5 444 22222222222 2 5 444444 33 88888 55555555555555555555 2 666666666666 2 33 2 2 2 2 2 5 5 2 66 2 33 77 4 2 2 2 33 5 2 5 2 2 2 33 8 2 2 2 2 2 5 2 2 33 2 2 2 2 2 2 2 8 5 2 11111 2 33 2 77 2 2 555 6 2 2 66 2 66 66 2 2 66 2 555 2 66 33 2 2 2 2 33 44 3 6 00 3 3 3 3 3 0 6 66 444 2 5 2 555 3 2 2 2 2 2 5 2 5 2 5 2 6 99 000000 2 2 33 2 5 2 2 77 2 555 777 33 33 5555 2 5 2 2 6666 44 2 33 5 2 2 2 000 33 2 2 2 2 2 2 2 111111 2 2 2 2 2 33 0 2 5 33 2 2 2 2 2 2 2 33 33 66 3 3
lowQualScore : . . . . . .. . . ... . . . . .. . . .. . . . . . . . . . .. . . . .. . . . . . . . . . . . . ... ........... . . ...... .. ..... .................... . ............ . .. . . . . . . . . .. . .. .. . . . . .. . . . . . . .. . . . . . . . . . .. . . . . . . . . . . ..... . .. . .. . . ... . . . .. . .. .. . . .. . ... . .. .. . . . . .. .. . . .. . . . . . . . .. ... . . . ... . . . . . . . . . . . . . .. ...... . . .. . . . . .. . ... ... .. .. .... . . . . .... .. . .. . . . . ... .. . . . . . . . ...... . . . . . .. . . . .. . . . . . . . .. .. .. . .
lowQualScore : 6 6 6 6 6 22 1 1 555 8 1 1 1 33 1 1 88 1 1 1 1 1 5 1 2 1 22 1 1 1 22 1 1 1 2 9 9 9 9 9 9 7 7 777 77777777777 7 3 999999 77 77777 11111111111111111111 7 333333333333 7 99 9 9 9 9 9 7 3 7 33 7 77 00 6 7 7 7 77 3 7 3 7 7 7 77 6 9 9 9 9 9 7 9 9 66 9 9 9 9 9 9 9 6 7 9 22222 9 99 9 99 9 9 000 6 9 9 66 9 88 88 9 9 88 9 000 9 88 99 9 9 7 7 99 22 1 2 44 1 1 1 1 1 2 2 55 444 9 7 9 000 0 9 9 9 9 9 7 9 7 9 7 9 0 66 777777 9 9 99 9 7 9 9 99 9 444 999 77 77 7777 9 7 9 9 1111 88 9 99 7 9 9 9 777 99 9 9 9 9 9 9 9 111111 9 9 9 9 9 99 7 9 7 99 9 9 9 9 9 9 9 99 99 88 1 1
consensus : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGT-ACC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGA-T--AT-CCCT-TGT-TA-GGCCTCCTG-A-CGTC-A-GTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-C--C--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAA-TGCCA-AAA--A-C-GG-T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-TTC-C---GGAAAAACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--AT-GCTG-GAA--TTA-GTGACC---CATG-T--TTCATAT--CCGTT-GCTTT-TCGAAG-TG-AG--AAA--GT-GCACTTTCTGTGATTTTCAAAGA-TTG--TTGTACTGTTTATAATG-GA-TTAAATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-G-AA-AGTT-GTTTT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
Reference ( family-7110 ) : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGT-ACC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGA-T--AT-CCCT-TGT-TA-GGCCTCCTG-A-CGTC-A-GTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTT-TA-GTT-T--CC-C--C--TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAA-TGCCA-AAA--A-C-GG-T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-TTC-C---GGAAAAACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--AT-GCTG-GAA--TTA-GTGACC---CATG-T--TTCATAT--CCGTT-GCTTT-TCGAAG-TG-AG--AAA--GT-GCACTTTCTGTGATTTTCAAAGA-TTG--TTGTACTGTTTATAATG-GA-TTAAATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-G-AA-AGTT-GTTTT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|1 : TATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AATAACC---ACG-TGA-TCT-AAAAT--TCTATGA-ATAA-TC-ATTAAG--AT--TAA-C-TTTGCCGAAATCAT-GAA-A-TA--T-TTTG-TAGATT--AT--CCT-TGT-TA--GCCTCCTG-ACCGTCAA-GTACA-AA-TGTCATAT-G----T-----------G--AGC-AA---G-GATGACATCCTTC----TAT--------T-----------TA-TA------------T-GT-C--A-TGGC-TGCA-TTTT-CTAA-AGTAT-TA-GTT-T---C-C--C--TTTGGTGTCCC-AA-T-GCC--G-TGAGGCGT-AG-AGT-CGC---AAA--A-C-GT-T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AATTT-C-AATAAATCA-GTT-ATCGC-AACATATA-TTC-C---GG-AAAACCA-T-TTCTCATC-T-TTCCGTTT--CCG--AT-GCTGCGAAATTCA-GTGACCCGGCATG-T--TTCATAT--CCGTT-GCTTTGTCGAAG-TG-AG---AA--GT-GCAC-TTCTGTGATTTTCAAAGA-TTG--TTGTACTGTTTATAAT--GA-TT-AATG-GGGC-T-CTCTGCT
gi|1 : -ATTG-TA-AT---TTGT--CTCCG-A--T-A-T-TTTACCAGTTG-CATTCG-GA-ATAT-GTTT--CATT---T--GA-AAA-T--TG-CGAACC-ATGG-AGA--AT-A--AAATGC---GATGC--TGG--AA----AC-GTTGTAT-TT-ATGCA----GAGGTCAGA-T-TACATAATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTCTTA-TT-AATTT-CTTT-ACGT-AATGACCGATA-----A-A-TTCG-C-AA-TCAA-A--TGGC--GCATGCAAAA--T-T-AG-CTT-A-AA-T--GG--T--AAAAA-TTTC-TCCAattgttctacaacgtcactaatttgtgtgaacctttccgtcttattgtaatttgtctccgatattttaccagttgcattcggaatatgtttcatttgaaaattgcgaaccatggagaataaaatgcgatgctggaaacgttgtatttatgcagaggtcagattacataattgtaattttaaatattttttctcttattaatttctttacgtaatgaccgataaattcgcaatcaaatggcgcatgcaaaattagcttaaatggtaaaaatttctcca
gi|10 : tatggagaaattcttaccactttattcatgagcttaataaccacgtgatctaaaattctatgaataatcattaagattaactttgccgaaatcatgaaatattttgtagattatccttgttagcctcctgaccgtcaagtacaaatgtcatatgtgagcaaggatgacatccttctatttatatgtcatggctgcattttctaaagtattagtttccctttggtgtcccaatgccgtgaggcgtagagtcgcaaaacgttgattttgatttgaaaaggaactttcttgaaaaataatttcaataaatcagttatcgcaacatatattccggaaaaccatttctcatctttccgtttccgatgctgcgaaattcagtgacccggcatgtttcatatccgttgctttgtcgaagtgagaagtgcacttctgtgattttcaaagattgttgtactgtttataatgattaatggggctctctgctattgttctacaacgtcactaatttgtgtgaacctttccgtcttAT--GAGCTT-AGT--CCGTGACG-TGAATCT-AAAA---C-TATGA-ATAAATC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-AGTA--T-TTTG-TAGA-T--AT-CGCT--GT----GGCCTCCTG-A-CGTC-A-GCACA-AA-TGTCA-AT-G---AT-------------TAGC-AA---G-GATGACAT--TTCT----AT--------T------------A-TA------------T-GTGC--A-TGGC-TGCAATTTT-CTAA-AGTTT-TA-GTT-T--CC-C--CCTTTGGGTGTCCCGAA-T-GCC--G-TGAGGC-T-GA-AAA-TGCCA-AAA--AAC-GG-T-G-ATTT-T-GAATTTGAA-AAGGA-A-C-TTT-CTA-G-AAA-AAT-AAATT-C-AATAA---A-GTTTGT--CCAAC--ATAATTC-C---GGAAAA-CC--C-TTCTTCAT-T-TTCCGTTTTGCCG--AT-GCTG---A--TTA-GTGACC---AATG-T--TTCATAT--CCGTT-G-TTT-TCGAAG-TG-AG--AAA--GT--CACTTTCTGTGATTTTCAAAGA-TTGT-TTGTACTG-TTATAATG-GA-TTAAATG-GGGC-TCCTCCGCTTAA--AAA-T-TTTA-ATTG-TA-AA---TTGAA-CTCCG-AA-T-A-T-TTTAC--ATTG-CATT-G-AACAGTT-G-TTT-CATT---GAAAA-AAA-A--TG-CGA-CCGATGG-AGA--AT-G--AAATGC---GATGC--TGGACAA----AC-G--GTAT-TT-ATGCA----GA-GTCAGA-T-TAC--AATTG-TAA-TTTA-AAATAA---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGTAAATGACCGAT------A-A-TTCG-CAAA-TCAAGA--TGGC-GGCATGC-AAATTT-T-AG-C-TAA-AA-T--GG--T--AAAAA-TTTC-
gi|11 : ATG-G-GAA-ATC-TT-AACCACTT-TAT-CAT--GAGCTT-AGT-ACG---ATG-TGA-TCT-AAAGG--T-AATGA-ATAA-TC-AATAAGTCATGCTAA-C-TTTTCC-AAATCAT-GAAGA-TA--T-TTTG-TATA-T--AT-CCCT-TGTCTA-GGCCTCC-G-A--GTC-A-GTACAGAA-TGTCC-AT-G---AT-----------G----------------GACAA--TTTC---TAT--------T-----------TACTA------------T-GTGGGAA-TGGC-TGCA-TTTT-CTAC-CGTTT-TAAGTT-T--CC-C--CC-TTTGGTG-CCC-AA-T-GCCCGA-TGAGGC-T-AG-AAA-TGCCA-AAA--A-CCAA-T-G-ATTT-TTGA-TT-GAACAAGGA-A-CCTTT-CTTTG-AAG-AAT-GA-TTTC-AATAA-----GTT-GT--C-AAC--ATA-TTC-C---GGAAAA-CCA-C-TTCTCAAT-T-T-CCGTT----CG--AT-GCTG-GAA--TTA-GTTACC---CATG-T--TTCATA---CCGTTTGCTT---CGAAG-TG-AG--AAA--GT-GCACTTTCTGTGATTTTCAA-GA-TTG--TTGTACTGTTTATAATG-GA-TTAAATG-GGGC-T-CTC---------AAA-A-CTTA-ATTG-TA-AA---TCGAA-CTC-G-AA-TCA-T-TTTACCAGTTG-CATT-G-AA-AGTT-GTTTTTCATTCATG--AATAAATA--TG-CGAACC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAG-----------------A-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGTATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTA-TCCA
gi|12 : tgTG-GAGAA-ATT-CT-TAC-ACTT-TATTCAG--GAGCTT-AGT-AC----ACG-TGA-TCT-AAAAG--T-TATGA-ATAA--C-ATTAAG-CATG-TAA-C-TTTTC-GAAATCAT-GAA-A-TA--T-TT-G-TAGA-T--AT-CC-T-TGT-TA-GGCCTC-TG-A--GTC-A-GTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---G-GATGACAT--TT-----TAT--------T-----------TA-TA------------T-GTGC--A-TG-C-TGCA-TTTC-TAAA-AGTTT-TA-GTT-T--CC-T--T--TT-GGTGTCCC-AA-T-GAC--G-TGAGGC-TGAG-AAA-TGC---AAA--A-C-GG-T-G-ATTT-T-GA-TTTGAA-AAAGC-G-C-TT--CTT-G-TAA-AAT-A--TT-C-A-TAA-----GTT-GT--C-AAC--ATA-T-C-C---GGAAAA--CA-A-TTCTCAAT-T-TTCCGTTT--C-G--AT-GCTG-GAA--TTA-GTGACC---TATG-T--TTCATAT--C-GTT-GCTTT-TCG--G-TG-AG--AAA--GT-GCACT----GTGATTTTCAA-TA-TTGG-TTGTACTGTT---------A-T--AATG-GGGC-T-CTC-GCTT-C--AAAAC-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA---A-T-TTTACCAGTTG-CATT-G-AA-AGTT-GTTT--CATT-------A-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----ACTG-T-TAT-TTTATGCA----GAGGTCAGAAT-TAC--AATTG-TAA-TTTT--AAT-A---TT--T-TTCTC-TA-TTAAATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC--AA--T-T-AG-C-T-A-AA-C--GG--T--AAAAA-TTTC-TCC
gi|13 : tac-GAGAG--TT-CT-TACCACTT-TAT-CATACGAGCTT-AGT-ACCC--ACG-TGC-TCT-AAAAG--T-TATGA-ATA--TC-AT-AAG-CATG-TAA-CACTTT------TCAC-G-----------TTTGATAGA-T--AT-TCCT-TGT-TA-GGCCTCCTG-A-CGTC-A-GTACA-AA-TGTCA-ATCG---AT-----------G-TAGCAAA---G-GATGA-AT--TTCT---AAT--------A-----------TA-TA------------T-GTGC--A-TGGCATGCA-TTTT-CTAA-AGTTTATA-TTT-C--CC-C--C--TTTGGTGTCCC-AA---GCC--G-TGAGG--T-AG-AAA-TGCCACAAAATA-C-GG-T-G-ATTTAT-GA-TTTGAA-AGGGACA-C-TTT-CTT-GTAAATAAT-AA-TT-CAAATGA------TT-GT--C-AACATATA-TTC-A---CGAAAAACCA-C-TTCTCAA--T-TTCCGTTTG-CCG--AT-GCTG-GAA--TTATGTGACC---CATG-TC-TTCAT-T--CCGTT-GCTTT-C---AG-TGCAG--AA
gi|14 : aTCCTG-A-CGTC-A-GTACA-AG-TGTCA-AT-G---AT-----------G-TAGC-AA---A-CATGGCAT--TTCT----AT--------T-----------TA-TACAAAGAATACA-T-GTGC--A-TGAC-TGCA-TTTT-CTAA-AGTTT-TA-ATTAT--CC-T--C--ATCGGTGTCCC-AA-T-GTC--G-TGAAGC-T-AG-AAA-TGCCA-AAA--A-A-CG-T-G-ATTT-T-GA-TTTGAA-AAAG-------TT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-TTC-CAAAAAAAAAACCA-C-TTCTCAGT-T-CTCTGTTT--CCG--AT-GCTG-GAA--TTA-GTGACC---CGTGTT--TTTATAT--CCGTT-GCTTT-GCAAAG-TG-
gi|15 : GCTT-CCAAAA-C-TTTA-ATTG-GACAA---TGGAAACTCCG-AAAT-A-TATGTACCAGTTG-CATT-GCAA-AGTT-GTTT--CATT---G--GA-AAA-AGATAACGA-CC-ATGGGAGACAAT-G--AAATGCCGCGATGC--TGA--AA----AC-G-TGTAT-TT-TTGCA----GAGGTCAGT-T-TAC--AATTGCTAA-ATTG-AAAT-A---TT--TATTCTC-T------ATTT-CTTT-ACTA-AATGACAGAT------A-ATTTCGCC-AA-TCAAGA--T-GC-GGCATGC-AAA--T-TCAG-C-C-A-AAGT--GG--TA-AAAAA-TTTC-TCCA
gi|16 : G-TG-AAGCAAA--GT--CACTTTCTGTA--TTTCAAAGAATTG--TTGTACGGTTTATAATG-GAATTAAATG-GG-C-T-CTCCGCTT-CA-AAA-C-TTTAGATTGTTA-AA---TCG-A-CTCCT-AA-T-AGTATTTACCAGTTG-CATT-G-AACAGTT-TGTTT-CATTA--G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--ATGG--AAATGC---GATG---TGG--AA----At
gi|17 : GC--TGG--AA-----C-GATGTATCTT-ATGCA----GAGGTCAGA-T-TAC--AATTGGTAA-TTTT-AAAT-A---TTCCT-TTCTC-TA-TT-AATTT-CTTTCACGT-AATGACCGAT------A-A-TTCG-C-AATTCAAGA--TGGC-GCAATGC-AAA--T-T-AGAC-T-A-AA-T--GG--TTAAAAAA-TTTC-TCC
gi|19 : attg---AT-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-G
gi|2 : cactgaatctgtacgggccacATG-GAGGG-ATT-CT-TACCACTT-TATTCAT--GAACTT-AGT-ATG---AGG-TGA-TCT-AAAAAC-T-TATGA-ATAT-TC-ATTAAG-CACG-TAA-C-TTTTCGGAAATCAT-AAA-C-TA--T-TTTG-TAGA-T--AT-CCCT-TGT-TAAGGCCCCCTG-A-CGTT-A-GTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---A-CATGACCT--TTCTATTTATAAAATGAAT-----------TA-CA------------T-GTGC--A-TGGT-TGCA-TTTT-CTAA-TGTCT-TA-ATT-TT-CC-C--C--CTCGGTGTCCC-AA-T-GCT--G-CGAAGC-A-AG-AAA-TGCCA-AAA----C-GG-T-G-ATTT-T-GA-TTTAAA-AACGA-A-C-GTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---T-GTT-GT--C-AAC--ATA-TTCAC---G--AAAACCA-C-TTCTCAAC-T-TTCCTTTT--CCG--AT-G-----AA--TTA-GTGACC---CTTG-T--TACATAT--CCGTT-GCTTT-TCGAAG-TG-AT--AAA--GT-GCAATTTCTGTGATTTTCAAAGA-TTG--TTGAAATGTTTATAATT-GA-TTAAATG-AGGC-T-CTCCGCTT-CA-AAA-C-TTTA-ATTG-GA-AA---TGGAA-CTCCG-AA-T-A-T-TGTACCAGTTG-CATT-G-AA-AGTT-G-TTT-CTTT---G--AC-AAG-A--TA-CGA-TC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AG----AC-G-TTTAT-TT-ATGCA----GAGGCCAGT-T-TAA--AGTTG-CAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACAGATCTGAGGA-G-TTCG-C-AA-TCAAGA--TGGCAGGCCTGC-AAA--T-T-AG-C-C-ACAA-TTCGG--T--AAACA-TTTCGTCCA
gi|20 : A-GTT-T--CC-C--CC-TTTGGTGTACC-AA-T-GCC--G-TGAGGC-T-AG-AAA-TGCCA-AAA--
gi|3 : TATGCGAGAA-ATT----TACCACTTATATTCAT--GAGCTTCAGT-ACC---ACGCTGA-TCTTAAAAG-----ATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTCC--AAATCATTGAA-A-TA--T-TTGT-TAGA-T--ATTCCCT-TGT-TA-G-CCTCC-G-A-CGTC-A-GTACA-AA-TGTCA-AT-G---ATTGTACAAACATGCTAGCCAA---GCGATGA-----TTCT---TAT--------T-----------AA-TA------------T-GTGC--A-TGCC-TGCA-TTTTTCTAA-A-TTT-TA-GCT-TTCCC-C--C--TTTGGT-TCTC-CA-T-GCC--G-TGAGGC-T-AGCAAA-TGCCA-AAA--A-C-GG-T-GCATTT-TTGA-TTGGAA-AAGGA-AAC-TTT-TTT-G-AAA-A-T-AA-TTAC-AATAA---A-GTT-GT--C-AAC--A-A-CTT-C---GGAAAAGC-A-C-TTCTCAAT-TGTTCCGTTT--CCG--AT-GCTG-GAA--TTA-GTGACC----ATG-T--TTCATAT--CCGT--GCCTT-TCGAAGCTG-AG--AAA--CT-GCACTTTCTGTGATTT-CAAA-A-TTG--TTGTAC-GTTTATAATGCGA-TTAAATG-GGGC-T-CTCCGCCTAC--AAA-A-CTTA-ATTGCTA-AA---T-GAA-CTCCG-AA-T-A-T-TTTACCAGTTGACAT--G-AA-AGTTAGCTTT-C-TT------AA-AAA-A--T--CGA-CC-ACGG-AGAGAAT-GCAAAATGC---GATGCGGCGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAATTTTT-AAAT-A---TA--T-TT-TC-CA-TT-AATTCGCTTT-ACGT-AAGAACCGAT------A-T-TCCG---AA-TGAAGA--TGGC--GCATGCAAAA--T-T-AG-C-T-A-AA-T---G--T--AAAAA--TTC-TCCA
gi|4 : TATG-GAGAACATTTCTGTACCACTT-TATTCAT--GA-CTT-AGT-GCC---AGC-TGA-TCT-AAAAGGGT-TAGGACATAA-TC-ATTAAG-CATG-TAAAC-TTTTCCGAAATCAT-AAACA-TACCT-TTTG-TAGA-TCTAT-CCCTATGT-TA-GGCCTCCTG-A-CGTC-TTGTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---G---TGGCAT--TC-----TAT--------T-----------TA-TA------------TAGTGC--A-TGGC-TGCA-TTTT-CTAA-AGTTTCTA-GTT-T--CC-C--CC-TTTGGTGTACC-AA-TTGCC--GGTGAG-C-T-AG-AAA-TGCCA-AAA--AAC-GGGT-G-ATTT-T-G--TTTGAA-AAGGA-A-C-TTTGCTT-G-AAA-A-T-AACTT-G-AATAA---ACGTT-GT--C-ATA--ATA-TTC-C---GGAAAA-CCAGC-TTCTCA---T-ATCCGTTT--CCAGCAT-GCTG-GAAA-TTA-GTGACC---CATG-T--TTCA-AT--C-GTT-GCTTT-TCGAAG-TG-AG--AAA--A--GCACTTTCTG-GATTTTCAAAGA-TTGGTCTGTACTGTTTATAATG-GA-T---ATGCGGGC-T-CT-CGCTT-C--AAA-C-TTTA-ATTG-TA-AAATGTCGAA-CTCCGTAA-T-A-T-TTTACCAG-TG-CATT-G-AA-AGTT-GTTTT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G---AATGCT--AATGC--TGG--AA----AC-G-TGTAT-TT-ATGCAAAGTGAGGTCAGA---TAC--AA-TG-TAA-ATTT-AAAT-GATTTT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGA-CGAT------ATT-TTCG-C-AA-TCAAGAATTGGC-GGCA-GC-AAA--TAT-AG-C-T---AA-T--GGCTT--AAAAt
gi|5 : aTAGG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGT-ATC---AGG-TGA-TCT-AAAAA--T-TATGA-ATAT-TC-ATTAAG-CATA-TAA-C-TTTTCCGAAATCAT-AAA-A-TA--T-TTTG-TAGA-T--AT-CCCT-TGT-TAAGGCCTCCTG-A-CGTC-A-GTGCA-TA-TGTCA-AT-G---AT-----------G-TAGC-AC---A-CATGACAT--TTCT----AT--------T-----------TA-TAAAATGAATTGCAT-GTGT--A-TGAT-TGCA-TTTT-CTAC-AGTCT-TA-ATT-T--TTAT--C--GTCGGTGTCCC-AA-T-GCC--G-TGAAGC-T-AG-AAA-TGCCA-AAA--AAC-GG-T-G-AGTT-T-GA-TTTGAA-AACGG-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAT--ATA-TTC-C---GGAAAA-CCA-T-TTCTCAAA-T-GTTCGTTT--CTG--AT-GCTG-GAA--TTA-GTGATC---CTTG-T--TACATGT--CCGTT-GCTTT-TCGAAG-TA-AA--AAG--GT-GCAATTTTTGTGATTTTCAAAGA-TTG--TTGAAATGTTTATAATG-GA-TTAAATG-GGTC-T-CTCCGCCT-C--AAA-AATTTA-ACTG-GA-AA---TGGAA-CTCTG-AA-T-A-T-TGTACCAGTTG-CATT-G-AA-AGTT-GTTT--CATT---G--AA-AAG-A--TG-TGA-TC-ATGG-AGA--AT-G-------C---GATGC--TGG--AATTAAAC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AATTG-TAA-TTCT-AAAT-A---TC--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACAGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAT--T-T-AG-C-C-A-AA-T--GG--T--AAAAT-TTTC-ACCA
gi|6 : aTATG-GAGAA-ATT-CT-TACCAC-T-TATT-AT--GAGCTT-AGT-ACC---A-G-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTTCCGAATCAT-G-A-A-TA--T-TTTG-TAGA-T--AT--CTT-TGT-TA-GGCCTCCTGAA-CGTC-A-GTACA-AA-T-TCA-AT-GAATAT-----------G-TAGC-AA---G-GATGACAT--TTC----TAT--------T-----------TA-TA------------T-GTGC--AGTGGC-TGCA-TTTT-CTAA-GTCTT-TATGTT-T--CC-C--CA-TTTGGTGTCCC-AACT-GCC--GTTGAGGC-T-AG-AAA-TGCC--AAA--A-C-GG-TGG-ATTT-T-GA-TTTGAA-AAGG--A-C-TTT-CTT-G-AAA-AATAAA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-TTC------GGAAAACCA-CTTTCTCAA--T-TTCCGTTT--CCGA-AT-GCTG-GAA--TTA-GTGACC---CATT-TTGTTCATAT--CCGTT-GCTTT-TCGAAG-TG-AG---AA--GT-GCACTTTCTGTGATTTTCAAAGATTTG--TTGTACTGTTTATAATG-GA--TAAAT--GGGC-T-CTCTGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TGGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATT-G-AA-AGTT-G-TTT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA--TTT-AAAT-A---TT--A-TTCTC-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAAA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|7 : aTATG-GAGAA-ATT-CT-TACCACTT-TATTCAT--GAGCTT-AGT-ATC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAT-TC-ATATAG-CATG-CAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGA-T--AT-CCCT-TGT-TAAGGCCTCCTG-A-CGTC-A-GTACA-AG-TGTCA-AT-G---AT-----------G-TAGC-AA---A-CATTACAT--TTCT----AT--------TGATAAAATGAATA-CA------------T-GTGC--C-TGAC-TGTA-ATTT-CTAA-AGTTT-TA-ATT-T--TC-CTCC--CTTGGTGTCCC-AA-T-GCC--G-TGATGC-TTAG-AAA-TGCCA-AAA--A-C-AG-T-T-ATTT-T-GA-TTTGAA-AACGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-TTC-C---GGAAAA-CCA-C-TTCTTCATAT-TTCCGTTT--CCG--ATTGCTG-GAA--TTA-GTGACC---CTTG-T--TTCATAT--CCGTT-GCTTT-TCGAAG-TG-AA--AAA--GT-GCACTTTTTGTGATTTTCAAAGA-TTG--TTGAACTGTTTA-AATG-GA-TTAAATA-GGGCTT-CTCCGCTT-C--AAA-T-TTTA-ATTG-TT-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGCTG----------------------CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-T--AAATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGT-T-TAC--AAATG-TAA-TTTT-AAAT-A---TT--T-TTCTC-TA-TT-AATTT-CTTT-ACGT-TATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCAt
gi|8 : aTATG-GAGAA-ATT-CT-TACCACTT--ATTCAT--GAGCTT-AGT-ACC---ACG-TGA-TCT-AAAAG--T-TATGA-ATAA-TC-ATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-TA--T-TTTG-TAGA-C--AT-CCCT-TGT-TA-G-CCTCCTG-A-CGTC-A-GTACA-AA-TGTCA-AT-G---AT-----------G-TAGC-AA---G-GATGACAT--TTCT---TAT--------T-----------TA-TA------------T-GTGC--A-TGGC-TG-A-TTTT-CTAA-AGTTT-TA-GTT-T--CC-C--C--TTTGGTGTCCC-AA-T-GC---G-TTAGGC-T-AG-AAA-TGCCA-AAA--A-C-G--T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-GA-TT-C-AATAA---A-GTT-GT--C-AAC--ATA-ATC-C---GGAAAAACCA-C-TTCTCAAT-T-TTCCGTTT--CCG--AT-GCTG-GAA--TTA-GTGACC---CATG-T--TTCATAT--CCG-T-GCTTT-TCGAAG-TG-AG--AAAGTGT-GCACTTTCTGTGA--TTCAGAGA-TTG--TTGTACTGTTTATAATG-GA-TTAAATG-GGGC-T-CTCCGCTT-C--AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-T-TTTACCAGTTG-CATTAA-AA-AGTT-GTTTT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G--AAATGC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-T-TAC--AATTG-TAA-TTTTAAAAG-A---TT--T-TTCTC-TATTT-AATTT-CTTT-ACGT-AATGA-CGAT------A-A-TTCG-C-AA-TCAAGA--T-GC-GGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAA-TTTC-TCCA
gi|9 : TTCAT--GAGCTT-AGT-ACC---ACG-TGA-TCT-AAAAG--T-TATGA-A-AA-TCCATTAAG-CATG-TAA-C-TTTTCCGAAATCAT-GAA-A-AA--TATTTG-TAGA-T--AT-CCCT-TTT-TA-GGCCTCCTG-A-CGTC-A-GTACA-AAATGTCATATTG---AT-----------G-TAGC-AACCTG-GAGAACAT--TTCT----AT--------T-----------TA-TA------------T-GTGC--A-TGGC-TGCA-TTTT-CTAATAGTTT--A-GTT-T--CC-C--CC-TTCGGTGTCCC-AA-T-GCC--G-TGAGGC-T-AG-AAAATGCCA-AAA--A-C-GG-T-G-ATTT-T-GA-TTTGAA-AAGGA-A-C-TTT-CTT-G-AAA-AAT-AA-TT-C-AATAA---A-GTT-GT--C-AAA--ATA-TTC-C---GGAAAA-CCA-C-TTCTCAAT-T-TTCCGTTT--TCG--AT--TTG-GAA--TTA-GTTACC---CATG-T--TTCATATATCCGTT-GCTTT-TCGAAG-TG-AG--AAA--GTTGCACTTTCTGTGATTTTCAAA-A-TTG--TTGTACTGTT-ATTATG-GA-TTAAAT--GGGC-T-CTCCGCTT-CA-AAA-C-TTTA-ATTG-TA-AA---TCGAA-CTCCG-AA-T-A-A-TTTACCAGTTG-CATT-G-AA-AGTT-GTTAT-CATT---G--AA-AAA-A--TG-CGA-CC-ATGG-AGA--AT-G---AATAC---GATGC--TGG--AA----AC-G-TGTAT-TT-ATGCA----GAGGTCAGA-TATAC--AATTG-TAA-TTTT-AAAT-AT--TT--T-TTCTT-TA-TT-AATTT-CTTT-ACGT-AATGACCGAT------A-A-TTCG-C-AA-TCAAGA--TGGC-TGCATGC-AAA--T-T-AG-C-T-A-AA-T--GG--T--AAAAATTTTC-TCC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|18 ): ACCAATCGCTAACTACTCGGCTATCTCCCGGTAACGTGAAATTTGAACGAGCAGGAT